ID:

dvi_15001

 Coordinate:

scaffold_13047:931163-931313 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.6 -11.4 -11.3 -11.1

Flybase annnotation

exon [dvir_GLEANR_8902:2]; CDS [Dvir\GJ23560-cds]; intron [Dvir\GJ23560-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGAGGATGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGCGAAAAATCGCGACACTAATCAAATTCGAAAACAAGATCAAAGGATCAAAAGAAAAAGCGCCCGAGCAACAAGTTCTCAGCTTGTACTCATAATGTAACTGATTACTGGCGACTGGCGACTGGCGACTGGCGACTGGTGACTGGTGACTGCCGACTGGCGACTGGTTACTGGCAATGGCA
*************************************************************************************************************************..........................((.((..(((.(((.........))).)))..))))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR1106730
embryo_16-30h
 M061
embryo
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 V047
embryo
 SRR060679
140x9_testes_total
 SRR060655
9x160_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR1106723
embryo_12-14h
 SRR1106728
larvae
 SRR1106729
mixed whole adult body
 SRR060677
Argx9_ovaries_total
......................CACCGGAAGACGTAATAAAACATCGAGG......................................................................................................................................................................................................... 28 0 1 3.00 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................CGTAATAAAACATCGAGG......................................................................................................................................................................................................... 18 0 1 3.00 3 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0
.....................CCACCGGAAGACGTAATAAAACATCGAGG......................................................................................................................................................................................................... 29 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0
.................................GTAATAAAACATCGAGGGTAAATATTA............................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AATGTAACTGATTACTGGCGA.................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................CACCGGAAGACGTAATAAAACATCGA........................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................GACTGACGACTGGTGACTGGT................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGAAAAAGCGCCCGAGCAACAA............................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGACTGCCGACTGGCGACTGGT.............. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAAGTCGACAACAAGAACAAAGGAT...................................................................................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GACTGCCGACTGGCGACTGGTTACT.......... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................AAATCGCGACACTAATCAAATTCGA....................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GACTGGTGACTGGTGACTGCCGACTGGCGACT................. 32 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CGAGCAACAAGTTCTCAGCTT................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GACTGGCGACTGGTGACTGGT................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATGATGCTGAATATGCCACCG................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................CCACCGGAAGACGTAATAAAAC................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGGCGACTGGTGACTGGTGACTGC............................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................CATCGAGGGTAAATATTA............................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..GAGGATGATGCTGAATATGC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GACTGCCGACTGGCGACTGGTTACTG......... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATATGCCACCGGAAGACGTAATAAAAC................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AATCAAATTCGAAAACAAGAT.............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GAATATGCCACCGGAAGACGTAAT..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CATAATGTAACTGATTACTGGC...................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GACTGGTGACTGCCGACTGGCGACTGGT.............. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CGTAATAAAACATCAAGG......................................................................................................................................................................................................... 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................GACTGGTGACTGGTGACTGC............................. 20 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ACTGGCGACTGGCGACTGGT.......................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACTGGTGACTGGTGACTGC............................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................AGAAAAGATCAAAGGATC..................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGCTCCTACTACGACTTATACGGTGGCCTTCTGCATTATTTTGTAGCTCCCATTTATAATGTTAAAATCTCGCTTTTTAGCGCTGTGATTAGTTTAAGCTTTTGTTCTAGTTTCCTAGTTTTCTTTTTCGCGGGCTCGTTGTTCAAGAGTCGAACATGAGTATTACATTGACTAATGACCGCTGACCGCTGACCGCTGACCGCTGACCACTGACCACTGACGGCTGACCGCTGACCAATGACCGTTACCGT
********************************************************************..........................((.((..(((.(((.........))).)))..))))************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 SRR060684
140x9_0-2h_embryos_total
 SRR060657
140_testes_total
 V053
head
 SRR060659
Argentina_testes_total
 SRR060663
160_0-2h_embryos_total
................................................................................................................................................................................GACCGCTGCCCGCTGCCCGCTGACGGCT............................................... 28 3 2 0.50 1 1 0 0 0 0 0
.........................................................................................TAGTTTAAGCTTTTGTTCAC.............................................................................................................................................. 20 2 5 0.20 1 0 1 0 0 0 0
........................................................................CTTTTTAGTGCTGTGGTT................................................................................................................................................................. 18 2 7 0.14 1 0 0 1 0 0 0
......TATTACGACCTATACGGT................................................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 1 0 0
........................................................................................................CTGTAGTTTCCTAGTTTTCTG.............................................................................................................................. 21 3 19 0.05 1 0 0 0 0 1 0
...................................................................................TGTGGTTAGTTTAAGCTGTC.................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13047:931113-931363 - dvi_15001 GCGAGGATGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGCGA----A----------------AAATCGCGA----CA---------------------------------------------------------------CT--------------------------------------------AATCAAATTCGAAA-----------------------------ACAAGATCAAAGGATCAAAAGAA--------AAAGCGC-CCGAGCAA----CA-AGTTCTCAGCTTGTACTCAT--AATGTAACTGATTACTGGCGACTGGCGACTGGCGACTGGCGACTGGTGACTGGTGACTGCCGACTGGCGACTGGTTACTGG-----------CAATGG--------------CA
droMoj3 scaffold_6540:4933247-4933488 - GCGAGGATGATGCTGAATATGCCACCGGACGCCGTAACAAAACATCGAGGGTAAATATTACAATTTCAGAGCGACTA--------------------ATCGCGA----CA---------------------------------------------------------------CT--------------------------------------------AATCAAATTCGAAA-----------------------------ACAAGATCAAAGGATCAAAAGATAA--------AGCGC-CCGAGTAA----CA-AGTTCATTGCTCGTACTCAT--TATGTAACTGATTACTGGTGACCGATGACCGATGACTGATGATTGGTTGGTAATGG---TTGGTT--------------GGCAATGGCCGCGATGTC-----------------
droGri2 scaffold_14906:5362585-5362848 + GCGAGGATGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGCGAACAAAAAAAA-----------AATTCGCGA----CA---------------------------------------------------------------CT--------------------------------------------AATCGAATTTGAAAAGC--------------AAGATCAAAGATCAAAGATCAAAGGATCAAAAGAA-------AAGAGCGC-CCGAGTAA----CAAGGTTCATAGCTTGAACTCATATTCTGGGACTGATTACTGGTTACTGATTACTGATTACCGATTACCGAATACCGATAA---CCGATTATCG-----------------------ATTTA-----------C---CA
droWil2 scf2_1100000004902:85987-86220 - dwi_2416 GCGAGGACGATGCTGAATATGCCACAGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGAG--CAAAAACAA-------------AATGCAAA-------------ATGCAAAATGAATCA------TTG--AAGT--------------------------GA-----------ACAATCAATCACAC-AACT------CA---CAAC---AAACAAAAA-------CA--AGAACAACAACCACACAAGCAAGATTAAAGGATCAAAAGATGATGATGATGATAAT-GATGATGAAGAAGA-A-------------------------------------------------------------------------------GTTCGATCG-------------------------ATGTC-----------------
dp5 2:7247094-7247180 - GCGAGGACGATGCTGAATATGCCACAGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGA--TCCAG-------------A--AACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:1107717-1107803 - GCGAGGACGATGCTGAATATGCCACAGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGA--TCCAG-------------A--AACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:943224-943396 + GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTAAAATTTTAGAGCGACTCAC----------------AAGCCGCGAAATCACA------TTTCTGAAC--TCTGA------A----AATT--------------------------------------C-GAAAAAATCGAAA----GCAGTA-------------------AA-GGC--------------AGTATTACTGAGACAAGATCAAAGGATCAAAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000394085:54848-55034 - GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTAACATTTTAGAGCGACCCAC----------------AAATCGCGAAAGCACA------TTTCTGAAA-CTCTGAACTCTGA----AATT--------------------------------------C-GAATAAATCGAAA----GCAGTATCACTGT------------AA-GGC--------------AGTAACACTGAGACAAGATCAAAGGATCAAAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302475:1411127-1411323 + GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGAG--CGAAAAAAAAAAACAAAATCAACTCGCGA----TCACATATATTTTCGAAT--TCCGA------ATC--AATTG-AA----------------------------------C-AAATAA------------------------------------AAA-AA--------------ACAAGCACTGAGACAAGATCAAAGGATCAAAAGAGCGTTA-GAGCAGCGC-A------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453800:2299056-2299294 + GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCGA----TCA------TTTTCGAAT--TTCGAACTCC--TCCGAATTG-AAT---------------------------------T-AAATATATATAAA----TCGAAAA-A---A-AAACG----------------------------AACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACC----
droEle1 scf7180000490995:518925-519147 - GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAAATTTAGAGCGACCCAA----------------AACTCGCGA----TTA------TTTCCGAAT--TCCGA------ATC--AATTG--------------------------------------AAAATAAAT--------------------------------CGAAA-AC--------------AAAACGACTGTGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCAC-
droRho1 scf7180000777158:29866-30088 - GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCGA----TCA------TTTCTGAAT--TCCGA------ATC--AATTG--------------------------------------AAAATAAAT--------------------------------CGAAA-AC--------------AAAACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCAC-
droBia1 scf7180000302402:8310671-8310927 + GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCCGAATTCTCTGA------GTC--AAGT--------------------------AAATCG-------AAAATAAATCGAAAACAAT------CG---AAAA---AAATCGAAA-------AT--AAATCGAACACGACTGAGGCTAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGAGGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCTCC
droTak1 scf7180000415380:1419944-1420176 - GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTAAGAGCGACCCAA-------------A--AACTCGCTA----TCA------TTTCTGA---------------ATC--AATTG-AAT---------------------------------C-AAATAAATCGAAA----TCGGTAACG---AAAA-------------AC---------------AAACGACTGAGGCAAGATCAAAGGATCAAAAGAGTATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCACC
droEug1 scf7180000409692:693741-693981 + GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCCGAAT--TCTGA------ATC--AAAA----------TTCAAACACAAAACACAAATCAAAAATTC-----AAATTGAAA----------ACG---AAAA-------------ACCAAAATAAAAAAAGATAACGACTGAGACAAGATCAAAGGATCAAAAGAGTATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCC----------------------------------------------------
dm3 chr3R:6222493-6222724 + GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAGTTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTGCAAAAAAAA-----------------------------AAAATATACCGAAA----TCGAAAATG---A-AAACGAATTCGAAA-TC--------------AATACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------
droSim2 3r:14856540-14856766 - dsi_9281 GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAGTTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTGCAAA----------------------------------AAAATATACCGAAA----TCGAGAATG---A-AAACGAATTCGAAA-TC--------------AATACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------
droSec2 scaffold_0:15722715-15722941 - GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAGTTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTGCAAA----------------------------------AAAATATACCGAAA----TCGAAAATG---A-AAACGAATTCGAAA-TC--------------AATACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------
droYak3 3R:10248373-10248592 + GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTAAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAAAT--TGAAA------ATC--AATTGCAA------------------------------------AAATATATCGAAT----TCGAAA----------------TCGAAT-AC--------------AAAACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------
droEre2 scaffold_4770:15397629-15397840 - GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTG--------------------------------------AAAATATATCGAAA----TCGAAA----------------TCGAAT-AC--------------AAAACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGCCCCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCGAGGATGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGCGA----A----------------AAATCGCGA----CA---------------------------------------------------------------CT--------------------------------------------AATCAAATTCGAAA-----------------------------ACAAGATCAAAGGATCAAAAGAA--------AAAGCGC-CCGAGCAA----CA-AGTTCTCAGCTTGTACTCAT--AATGTAACTGATTACTGGCGACTGGCGACTGGCGACTGGCGACTGGTGACTGGTGACTGCCGACTGGCGACTGGTTACTGG-----------CAATGG--------------CASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................CACCGGAAGACGTAATAAAACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2813.003000000000000000000000000000000000000000000000000000000001020000
................................CGTAATAAAACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1813.003000001000000000000000000101000000000000000000000000000000000000
.....................CCACCGGAAGACGTAATAAAACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2912.002000000000000000000000000000000000000000000000000000100000100000
.................................GTAATAAAACATCGAGGGTAAATATTA........................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AATGTAACTGATTACTGGCGA.............................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
......................CACCGGAAGACGTAATAAAACATCGA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGAA--------AAAGCGC-CCGAGCAA----CA-A.......................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TGACTGCCGACTGGCGACTGGT.......................................2211.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCGACTGGCGACTGGTTACT...................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................AAATCGCGA----CA---------------------------------------------------------------CT--------------------------------------------AATCAAATTCGA.............................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGACTGGTGACTGCCGACTGGCGACT..........................................3211.001000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................CGAGCAA----CA-AGTTCTCAGCTT............................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GACTGGCGACTGGTGACTGGT............................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......ATGATGCTGAATATGCCACCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....................CCACCGGAAGACGTAATAAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGGCGACTGGTGACTGGTGACTGC......................................................2411.001000000000000000100000000000000000000000000000000000000000000000
..........................................CATCGAGGGTAAATATTA........................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000100000000000000000000000000000000
..GAGGATGATGCTGAATATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCGACTGGCGACTGGTTACTG..................................2611.001001000000000000000000000000000000000000000000000000000000000000
................ATATGCCACCGGAAGACGTAATAAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................AATCAAATTCGAAA-----------------------------ACAAGAT.......................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............GAATATGCCACCGGAAGACGTAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................CAT--AATGTAACTGATTACTGGC...............................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGACTGCCGACTGGCGACTGGT.......................................2811.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGACTGGTGACTGC......................................................2020.501000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................ACTGGCGACTGGCGACTGGT...................................................................2020.501000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGACTGGTGACTGC......................................................1930.331001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCGAGGATGATGCTGAATATGCCACCGGACGCCGTAACAAAACATCGAGGGTAAATATTACAATTTCAGAGCGACTA--------------------ATCGCGA----CA---------------------------------------------------------------CT--------------------------------------------AATCAAATTCGAAA-----------------------------ACAAGATCAAAGGATCAAAAGATAA--------AGCGC-CCGAGTAA----CA-AGTTCATTGCTCGTACTCAT--TATGTAACTGATTACTGGTGACCGATGACCGATGACTGATGATTGGTTGGTAATGG---TTGGTT--------------GGCAATGGCCGCGATGTC-----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................GACCGATGACTGATGATTGGTTG.................................................................2311.001100000
..............GAATATGCCACCGGACGCCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................GG---TTGGTT--------------GGCAATGGCCGCGAT....................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................................AACTGATTACTGGTGACCGATGACCGA..................................................................................2711.001000010
...........................GACGCCGTAACAAAACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................................................................T--TATGTAACTGATTACTGGTGACC...........................................................................................2411.001100000
.......................................................TATTACAATTTCAGAGCGACTA--------------------ATCG...............................................................................................................................................................................................................................................................................................................................................................2611.001000001
droGri2
GCGAGGATGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGCGAACAAAAAAAA-----------AATTCGCGA----CA---------------------------------------------------------------CT--------------------------------------------AATCGAATTTGAAAAGC--------------AAGATCAAAGATCAAAGATCAAAGGATCAAAAGAA-------AAGAGCGC-CCGAGTAA----CAAGGTTCATAGCTTGAACTCATATTCTGGGACTGATTACTGGTTACTGATTACTGATTACCGATTACCGAATACCGATAA---CCGATTATCG-----------------------ATTTA-----------C---CASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GCGAGGACGATGCTGAATATGCCACAGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGAG--CAAAAACAA-------------AATGCAAA-------------ATGCAAAATGAATCA------TTG--AAGT--------------------------GA-----------ACAATCAATCACAC-AACT------CA---CAAC---AAACAAAAA-------CA--AGAACAACAACCACACAAGCAAGATTAAAGGATCAAAAGATGATGATGATGATAAT-GATGATGAAGAAGA-A-------------------------------------------------------------------------------GTTCGATCG-------------------------ATGTC-----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........ATGCTGAATATGCCACAGGAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
............................................................................................................................................................................................................................................................AACCACACAAGCAAGATTAAAGG.................................................................................................................................................................................2311.00100010
..........TGCTGAATATGCCACAGGAAGACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................................................................................................................................................................................................................................................................................GATAAT-GATGATGAAGAAGA-A-------------------------------------------------------------------------------GTTCGATC................................................2911.00100100
.........ATGCTGAATATGCCACAGGAAGACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....GACGATGCTGAATATGCCACAGGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
........................................................ATTACAATTTTAGAGAG--CAAA.....................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............GAATATGCCACAGGAAGACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.............TGAATATGCCACAGGAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.........................................................................................................................................................................................................................................................................................................AAT-GATGATGAAGAAGA-A-------------------------------------------------------------------------------GTTC....................................................2211.00100100
.........ATGCTGAATATGCCACAGGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..............................GACGTAATAAAACATCGAGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.CGAGGACGATGCTGAATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..............GAATATGCCACAGGAAGACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........GATGCTGAATATGCCACAGGAAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.........................................................................................................................................................................................................................................................................................................AAT-GATGATGAAGAAGA-A-------------------------------------------------------------------------------GT......................................................2020.50100010
.............................................................................................................................................................................................................................................................................................GATGATGATGATAAT-GAT....................................................................................................................................................18200.05100001
dp5
GCGAGGACGATGCTGAATATGCCACAGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGA--TCCAG-------------A--AACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GCGAGGACGATGCTGAATATGCCACAGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGA--TCCAG-------------A--AACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
GCGAGGACGATGCTGAATATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
...............................................................TTTTAGAGA--TCCAG-------------A--AACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G.................................................................................................................................................................................2011.001100000
droAna3
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTAAAATTTTAGAGCGACTCAC----------------AAGCCGCGAAATCACA------TTTCTGAAC--TCTGA------A----AATT--------------------------------------C-GAAAAAATCGAAA----GCAGTA-------------------AA-GGC--------------AGTATTACTGAGACAAGATCAAAGGATCAAAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................ATCGAAA----GCAGTA-------------------AA-GGC--------------AGTATTACT.................................................................................................................................................................................................2711.001010000
............................................................................................................................................................................................GAAAAAATCGAAA----GCAGTA-------------------AA-GGC--------------..........................................................................................................................................................................................................2411.001000010
.CGAGGACGATGCTGAATATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..................ATGCCACCGGAAGACGTAATAAAACA........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
droBip1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTAACATTTTAGAGCGACCCAC----------------AAATCGCGAAAGCACA------TTTCTGAAA-CTCTGAACTCTGA----AATT--------------------------------------C-GAATAAATCGAAA----GCAGTATCACTGT------------AA-GGC--------------AGTAACACTGAGACAAGATCAAAGGATCAAAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGAG--CGAAAAAAAAAAACAAAATCAACTCGCGA----TCACATATATTTTCGAAT--TCCGA------ATC--AATTG-AA----------------------------------C-AAATAA------------------------------------AAA-AA--------------ACAAGCACTGAGACAAGATCAAAGGATCAAAAGAGCGTTA-GAGCAGCGC-A------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAAACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCGA----TCA------TTTTCGAAT--TTCGAACTCC--TCCGAATTG-AAT---------------------------------T-AAATATATATAAA----TCGAAAA-A---A-AAACG----------------------------AACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACC----SizeHit CountTotal NormTotal
No Reads
droEle1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAAATTTAGAGCGACCCAA----------------AACTCGCGA----TTA------TTTCCGAAT--TCCGA------ATC--AATTG--------------------------------------AAAATAAAT--------------------------------CGAAA-AC--------------AAAACGACTGTGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCAC-SizeHit CountTotal NormTotal
No Reads
droRho1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCGA----TCA------TTTCTGAAT--TCCGA------ATC--AATTG--------------------------------------AAAATAAAT--------------------------------CGAAA-AC--------------AAAACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCAC-SizeHit CountTotal NormTotal
No Reads
droBia1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCCGAATTCTCTGA------GTC--AAGT--------------------------AAATCG-------AAAATAAATCGAAAACAAT------CG---AAAA---AAATCGAAA-------AT--AAATCGAACACGACTGAGGCTAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGAGGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCTCCSizeHit CountTotal NormTotal
No Reads
droTak1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTAAGAGCGACCCAA-------------A--AACTCGCTA----TCA------TTTCTGA---------------ATC--AATTG-AAT---------------------------------C-AAATAAATCGAAA----TCGGTAACG---AAAA-------------AC---------------AAACGACTGAGGCAAGATCAAAGGATCAAAAGAGTATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTATCACACACTCTCACCCACCSizeHit CountTotal NormTotal
No Reads
droEug1
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCCGAAT--TCTGA------ATC--AAAA----------TTCAAACACAAAACACAAATCAAAAATTC-----AAATTGAAA----------ACG---AAAA-------------ACCAAAATAAAAAAAGATAACGACTGAGACAAGATCAAAGGATCAAAAGAGTATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCC----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAGTTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTGCAAAAAAAA-----------------------------AAAATATACCGAAA----TCGAAAATG---A-AAACGAATTCGAAA-TC--------------AATACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................CGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000010000200000000000000000000101000000000000100000001000
..........................................................................CCCAA----------------AACTCGCTA----TCA------TTTC...........................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000005030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACCGGAAGACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100100000100000000
.....................................................AATATTACAGTTTTAGAGCGA..........................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000000000000000000100000000000000000000000000000000000
................ATATGCCACCGGAAGACGTAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGCCACCGGAAGACGTAATAAGACATC......................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................ACCGGAAGACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000
......ACGATGCTGAATATGCCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GACGATGCTGAATATGCCACCGGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GATCAAAGGATCAAAAGAGCA.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGGACGATGCTGAATATGCCACCGGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AATACGACTGAGACAAGATCA.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GACCCAA----------------AACTCGCTA----TCA------T..............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATGCCACCGGAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCGGAAGACGTAATAAGACATCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................ACCGGAAGACGTAATAAGACATCGAGGGT................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................ATTA-GAGCAGCGC-CCGGATGATG.............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............CTGAATATGCCACCGGAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............CTGAATATGCCACCGGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGGACGATGCTGAATATGCCACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACGATGCTGAATATGCCACCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCGAGGACGATGCTGAATATGCCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........ATGCTGAATATGCCACCGGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCGAGGACGATGCTGAATATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........ATGCTGAATATGCCACCGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGAATATGCCACCGGAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GACGATGCTGAATATGCCACCGGAAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AGGGTAAATATTACAGTTTTA................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................ATCAAAAGAGCATTA-GAGCAGCGC-CCG....................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................CAAGATCAAAGGATCAAAAGA........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATGCCACCGGAAGACGTAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTAATAAGACATCGAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................TGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------C.....................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................A-----------------------------AAAATATACCGAAA----TCGAAA.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGAATATGCCACCGGAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CAAGATCAAAGGATCAAG...........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.CGAGGACGATGCTGAATATGCCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCACCGGAAGACGTAATAAGACATC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCTGAATATGCCACCGGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAGGATCAAAAGAGCATTA-GAGCAGC..........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ATACGACTGAGACAAGATCAAAGGA................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AAA-----------------------------AAAATATACCGAAA----TC.....................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCTGAATATGCCACCGGAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAGGACGATGCTGAATATGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACCGGAAGACGTAATAAGACATC......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCGAGGACGATGCTGAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.......CGATGCTGAATATGCCACCGGAAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GACTGAGACAAGATCAAA...................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TGAATATGCCACCGGAAGACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAGGATCAAAAGAGCATTT-TC...............................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAGTTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTGCAAA----------------------------------AAAATATACCGAAA----TCGAGAATG---A-AAACGAATTCGAAA-TC--------------AATACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................GAGACAAGATCAAAGGATCA.............................................................................................................................................................................2012.00200200000000000000
......................CACCGGAAGACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2812.00201000000000001000
............................................................CAGTTTTAGAGCGACCCAA----------------AAC..................................................................................................................................................................................................................................................................................................................................................................2212.00200002000000000000
..GAGGACGATGCTGAATATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
......................CACCGGAAGACGTAATAAGACAT.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
...........GCTGAATATGCCACCGGAAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.................TATGCCACCGGAAGACGTAATAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.............................................................................................................................................................................................................................................................................................................CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCAC..................................................2111.00100100000000000000
..............................GACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.............TGAATATGCCACCGGAAGACGTAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...............................................................................................................................................................................................................................GAATTCGAAA-TC--------------AATACGACTGAGAC............................................................................................................................................................................................2611.00100010000000000000
.......................ACCGGAAGACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
.............TGAATATGCCACCGGAAGACGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
..................................................................................................................................................................................................................................................................TGAGACAAGATCAAAGGATCA.............................................................................................................................................................................2111.00100010000000000000
........................................................................................................................................................A----------------------------------AAAATATACCGAAA----TCGATT.................................................................................................................................................................................................................................................2150.20100000010000000000
droSec2
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAGTTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTGCAAA----------------------------------AAAATATACCGAAA----TCGAAAATG---A-AAACGAATTCGAAA-TC--------------AATACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................GACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020020
...............................ACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
................................CGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.CGAGGACGATGCTGAATATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.......................................................................................................................................................................................................................................................................CAAGATCAAAGGATCAAAAGAGC......................................................................................................................................................................2311.0011000
.....................CCACCGGAAGACGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
.............................AGACGTAATAAGACATCGAGGCA................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.......................................................TATTACAGTTTTAGAGCGACC........................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
droYak3
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTAAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAAAT--TGAAA------ATC--AATTGCAA------------------------------------AAATATATCGAAT----TCGAAA----------------TCGAAT-AC--------------AAAACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............GAATATGCCACCGGAAGACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000
..............................GACGTAATAAGACATCGAGGC.................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................................AGACATCGAGGGTAAATATTACAAT....................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................................CGTAATAAGACATCGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
..............GAATATGCCACCGGAAGACGTAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................ATATGCCACCGGAAGACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................TTTAAGAGCGACCCAA----------------AACT.................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..........................................................................................................................................................................................................................................................................................................GC-CCGGATGATGACCA-C-------------------------------------------------------------------------------GCC.....................................................2011.00100100000000
..................ATGCCACCGGAAGACGTAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
GCGAGGACGATGCTGAATATGCCACCGGAAGACGTAATAAGACATCGAGGGTAAATATTACAATTTTAGAGCGACCCAA----------------AACTCGCTA----TCA------TTTCTAA---------------ATC--AATTG--------------------------------------AAAATATATCGAAA----TCGAAA----------------TCGAAT-AC--------------AAAACGACTGAGACAAGATCAAAGGATCAAAAGAGCATTA-GAGCAGCGCCCCGGATGATGACCA-C-------------------------------------------------------------------------------GCCCACTAG-------------------------CTAT------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................CACCGGAAGACGTAATAAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
................ATATGCCACCGGAAGACGTAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.................TATGCCACCGGAAGACGTAATAAGACATC......................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
................ATATGCCACCGGAAGACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..................ATGCCACCGGAAGACGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100

Generated: 05/17/2015 at 04:47 AM