ID:

dvi_149

 Coordinate:

scaffold_13324:1115153-1115236 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.8 -25.8 -25.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Jockey2LINEJockey+

Sense Strand Reads

AGTGCCATGCTGCTTACGAAATCCAAATTGAAATTTAAGGATCGCAAGGGTAACAGTCTCGAGATCCAGCATTCTAATAAGAATTGAGACGCAGGAGCTCAACGATTATAGAAGGAATCTGAGGCGATCTATCTCCATGCAGATGTTGTTGATTCCTGGGAGCAGCTCTTGTTGCAGCATATAT
***********************************..((.((((((.(((((...(((((.((((((....(((((.(((...(((((.........)))))...)))))))))).)))))))))....)))))...))).))).)).************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060675
140x9_ovaries_total
 M047
female body
 SRR060688
160_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060673
9_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060677
Argx9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 SRR060687
9_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060683
160_testes_total
 SRR060655
9x160_testes_total
 M027
male body		 SRR060660
Argentina_ovaries_total
 SRR060670
9_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 M061
embryo
 SRR060661
160x9_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 SRR060666
160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V047
embryo
 SRR060680
 9xArg_testes_total
 SRR060689
160x9_testes_total
 V116
male body		 SRR060657
140_testes_total
..................................................TAACAGTCTCGAGATCCAGCATTCTAA........................................................................................................... 27 0 1 111.00 111 18 6 5 17 9 5 7 8 5 0 9 9 2 3 0 3 1 0 0 1 0 2 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTTG............. 25 0 2 83.50 167 13 0 23 5 14 14 6 5 11 22 5 6 8 6 12 4 2 3 3 0 1 3 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTTGT............ 26 0 2 30.00 60 5 0 2 5 7 3 2 3 3 5 4 8 3 7 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAGAAGGAATCTGAGGCGATCTATC................................................... 25 0 1 23.00 23 2 8 0 1 1 0 1 2 0 0 1 0 0 0 2 0 0 0 0 2 0 0 1 0 1 0 0 0 0 1 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCT............................................................................................................. 25 0 4 21.00 84 5 8 20 6 2 7 1 5 8 2 4 1 3 0 0 1 4 4 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0
..................................................TAACAGTCTCGAGATCCAGCATTC.............................................................................................................. 24 0 4 19.75 79 7 15 7 4 3 4 2 7 1 2 2 2 4 6 0 3 5 1 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCTA............................................................................................................ 26 0 1 19.00 19 0 2 3 0 2 2 2 0 0 0 0 1 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTGTTGATTCCTGGGAGCAGCTCTTG............. 26 0 1 15.00 15 0 2 0 2 1 1 3 1 1 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATT............................................................................................................... 23 0 4 9.00 36 5 0 1 0 4 3 0 3 6 0 1 2 2 2 0 0 5 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCT............... 23 0 2 8.50 17 1 0 2 0 0 4 0 2 2 3 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAGAAGGAATCTGAGGCGATCTATCT.................................................. 26 0 1 8.00 8 0 3 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTGTTGATTCCTGGGAGCAGCTCTTGT............ 27 0 1 6.00 6 0 2 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTTGTT........... 27 0 2 6.00 12 2 0 0 0 1 0 0 1 1 2 1 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTGTTGATTCCTGGGAGCAGCTCT............... 24 0 1 6.00 6 0 0 0 1 0 2 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TATAGAAGGAATCTGAGGCGATCTA..................................................... 25 0 1 5.00 5 0 1 0 0 0 0 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTT.............. 24 0 2 4.50 9 1 0 1 0 2 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TATAGAAGGAATCTGAGGCGATCTATC................................................... 27 0 1 4.00 4 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TCAACGATTATAGAAGGAATCTGA.............................................................. 24 0 1 4.00 4 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TTGTTGATTCCTGGGAGCAGCTC................ 23 0 1 3.00 3 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTGTTGATTCCTGGGAGCAGCTCTT.............. 25 0 1 3.00 3 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CAACGATTATAGAAGGAATCTGA.............................................................. 23 0 1 3.00 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CAACGATTATAGAAGGAATCTGAG............................................................. 24 0 1 3.00 3 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAGAAGGAATCTGAGGCGATCTATCTCC................................................ 28 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CAGATGTTGTTGATTCCTGGGAGC..................... 24 0 1 3.00 3 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTC................ 22 0 2 3.00 6 0 0 1 1 0 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGATTCCTGGGAGCAGCTCTTGTTG.......... 25 0 2 2.50 5 0 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCA................................................................................................................. 21 0 4 2.50 10 0 1 0 0 1 3 0 0 0 2 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGC.................................................................................................................. 20 0 4 2.25 9 2 0 2 0 1 0 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCAT................................................................................................................ 22 0 4 2.25 9 0 1 1 0 0 1 0 0 0 0 3 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCCATGCAGATGTTGTTGATTCCTGG......................... 26 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CAACGATTATAGAAGGAATCTGAGGCG.......................................................... 27 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AACAGTCTCGAGATCCAGCATTCTAA........................................................................................................... 26 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TATAGAAGGAATCTGAGGCGATC....................................................... 23 0 1 2.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CAGATGTTGTTGATTCCTGGGAGCAGC.................. 27 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TCAACGATTATAGAAGGAATCTGAGG............................................................ 26 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCTAGCATTCTAA........................................................................................................... 27 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CAACGATTATAGAAGGAATCTGAGGC........................................................... 26 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGC.................. 20 0 2 1.50 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTGATTCCTGGGAGCAGCTCTTGTT........... 25 0 2 1.50 3 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GATTCCTGGGAGCAGCTCTTG............. 21 0 2 1.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCTAATA......................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CAACGATTATAGAAGGAAT.................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTTGTTGATTCCTGGGAGCAGCTCT............... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACTGTCTCGAGATCCAGCATTCTAA........................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AGTCTCGAGATCCAGCATTCTAA........................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAGAAGGAATCTGAGGCGATCTA..................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GAATATGAGGCGATCTAT.................................................... 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................ATAGAAGGAATCTGAGGCGATCTATC................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................TCAACGATTATAGAAGGAATCTGAG............................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TCGAGATCCAGCATTCTAATAAGAATT................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCACAGTCTCGAGATCCAGCATTCTAA........................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTGATTCCTGGGAGCAGCTCTTGTTG.......... 26 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAGCAGTCTCGAGATCCAGCATTCTAC........................................................................................................... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CAGATGTTCTTGATTCCTGGGAGC..................... 24 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGCTTCGAGATCCAGCATTCTAA........................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTTC............. 25 1 2 1.00 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCTAAT.......................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAGAAGGGATCTGAGGCGATCTATC................................................... 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCCAGCATTCTAATAAGAATTGAGACG............................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TCAACGATTATAGAAGGAATCTGAGGCG.......................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAGAAGGAATCTGAGGCGATCT...................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AGCATTCTAATAAGAATTGAGACGCAG.......................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TATAGAAGGAATCTGAGGCGATCT...................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTGTTGATTCCTGGGAGCAGC.................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGCGCAGCTCTTG............. 25 1 2 1.00 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCTCA........................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CAGATGTTGTTGATTCCTGGGAGCAG................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCT................. 21 0 2 1.00 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGATTCCTGGGAGCAGCTCTGTTG........... 24 3 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GTCTCGAGATCCAGCATTCTAA........................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTTGTTGATTCCTGGGAGCAGCTC................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCGTTCTAA........................................................................................................... 27 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................CTCGAGATCCAGCATTCTAA........................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TCAACGATTATAGAAGGAATCTGAGGC........................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TATCAGTCTCGAGATCCAGCATTCTAA........................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GCAGATGTTGTTGATTCCTGGGAGC..................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCTATCTCCATGCAGATGTTGTTGAT............................... 26 0 7 0.86 6 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................TGATTCCTGGGAGCAGCTCTTGTTGCAA....... 28 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTTGTC........... 27 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTTGTTG.......... 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TCCTGGGAGCAGCTCTTGTTGCAGC...... 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTGATTCCTGGGAGCAGCTCTTGTTGC......... 27 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCGGCTCTTT............. 25 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGATTCCTGGGAGCAGCTCTTGTT........... 24 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGATTCCTGGGAGCAGCTCTTGCT........... 24 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTTGTA........... 27 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGATTGCTGGGAGCAGCTCTTGTTG.......... 25 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CTAACAGTCTCGAGATCCAGCATTC.............................................................................................................. 25 1 4 0.50 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTGATTCCTGGGAGCAGCTCTTG............. 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCA.................... 18 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCCCTTGT............ 26 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGCGCAGCTCTTGT............ 26 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGCAGCAGCTCTTGT............ 26 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GTTGATTCCTGGGAGCAGCTCTTG............. 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTTTGATTCCTGGGAGCAGCTCTTGT............ 26 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTGATTCCTGGGAGCAGCTCTTGTTA.......... 26 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTTGT.............. 24 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGAGAGCAGCTCTTT............. 25 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCAGCTCTGGT............ 26 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGTGAGCAGCTCTTG............. 25 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GTTGATTCCTGGGAGCAGCTCTTGTTGC......... 28 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TTCCTGGGAGCAGCTCTTG............. 19 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTGGGAGCGGCTCTTG............. 25 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATATAGGGAATCTGAGGCG.......................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................TAACAGTCTCGAGATCCAG................................................................................................................... 19 0 4 0.50 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCCTTCT............................................................................................................. 25 1 4 0.50 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CGATCTATCTCCATGCAGATGTTGT................................... 25 0 7 0.43 3 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCTATCTCCATGCAGATGTTGTTGATT.............................. 27 0 7 0.29 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................GATCTATCTCCATGCAGATGTTGT................................... 24 0 7 0.29 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................TCTATCTCCATGCAGATGTTGTTGA................................ 25 0 7 0.29 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTCGGAGCAGCTCTTG............. 25 1 7 0.29 2 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTTGAGATCCAGCATCC.............................................................................................................. 24 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCCTTC.............................................................................................................. 24 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................ATCGCAAGGGTAACAGTCTCGAGATC...................................................................................................................... 26 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCATC.................................................................................................................. 20 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTAA............................................................................................................. 25 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGCTCCAGCATTC.............................................................................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCTTC........................................................................................................... 27 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCTAT........................................................................................................... 27 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAATCTCGAGATCCAGCATTC.............................................................................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTT.............................................................................................................. 24 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................AACAGTCTCGAGATCCAGCATTCT............................................................................................................. 24 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTAT............................................................................................................. 25 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................TAAAGTCTCGAGATCCAGCATTCT............................................................................................................. 24 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AGGGTAACAGTCTCGAGATCCAGCA................................................................................................................. 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCA.................................................................................................................... 18 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTTGAGATCCAGCATTC.............................................................................................................. 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTTT............................................................................................................. 25 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGCATTCTT............................................................................................................ 26 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCGAGATCCAGTCA................................................................................................................ 22 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TAACAGTCTCTAGATCCAGCATTCT............................................................................................................. 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAGAAGGAACCTGAGGCGATC....................................................... 21 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................TACCAGTCTCGAGATCCAGCATTCT............................................................................................................. 25 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................CTGAGGCGATCTATCTCCATGCAGATG....................................... 27 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................ATGTTGTTGATTCCTCGGCGCCGCTC................ 26 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GAATATGAGGCGATATAT.................................................... 18 2 20 0.15 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................CGATCTATCTCCATGCAGATGTTGTT.................................. 26 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................CAACAGTCTCGAGATCCAGCA................................................................................................................. 21 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ATCTATCTCCATGCAGATGTTGT................................... 23 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGATTCCTCGGAGCAGCTCTTGT............ 26 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCCATGCAGATGTTGTTG................................. 18 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TCTATCTCCATGCAGATGTTGT................................... 22 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TCCATGCAGATGTTGTTGATTC............................. 22 0 7 0.14 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TCGGAGCAGCTCTTGTTGCAGC...... 22 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................CGATCTATCTCCATGCAGATGT...................................... 22 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GAATATGAGGCGATTTATC................................................... 19 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................ACGCAGGAGGTCAGCGGTT............................................................................. 19 3 18 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................GTTGAGTCCCGGGAGGAG................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TCACGGTACGACGAATGCTTTAGGTTTAACTTTAAATTCCTAGCGTTCCCATTGTCAGAGCTCTAGGTCGTAAGATTATTCTTAACTCTGCGTCCTCGAGTTGCTAATATCTTCCTTAGACTCCGCTAGATAGAGGTACGTCTACAACAACTAAGGACCCTCGTCGAGAACAACGTCGTATATA
************************************..((.((((((.(((((...(((((.((((((....(((((.(((...(((((.........)))))...)))))))))).)))))))))....)))))...))).))).)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060676
9xArg_ovaries_total
 M047
female body
 M027
male body		 SRR060678
9x140_testes_total
 SRR060677
Argx9_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060679
140x9_testes_total
 SRR060673
9_ovaries_total
 SRR060654
160x9_ovaries_total
 SRR060658
140_ovaries_total
 SRR060656
9x160_ovaries_total
 SRR060683
160_testes_total
 SRR060681
Argx9_testes_total
 M061
embryo
 SRR060680
 9xArg_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060670
9_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060657
140_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 V116
male body
....................................................................................................................................GAGGTACGTCTACAACAACTAAGG............................ 24 0 7 4.00 28 7 0 0 7 0 6 1 0 2 2 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0
......................................CCTAGCGTTCCCATTGTCAGAG............................................................................................................................ 22 0 4 4.00 16 2 2 8 0 0 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AGAGGTACGTCTACAACAACTAAGG............................ 25 0 7 3.29 23 4 0 0 7 0 2 0 1 7 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0
.....................................TCCTAGCGTTCCCATTGTCAGAG............................................................................................................................ 23 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CGAGTTGCTAATATCTTCCTTA.................................................................. 22 0 1 3.00 3 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................CTAGCGTTCCCATTGTCAGAG............................................................................................................................ 21 0 4 2.25 9 1 1 0 0 0 0 0 1 0 0 0 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATAGAGGTACGTCTACAACAACTAAGG............................ 27 0 7 1.29 9 4 0 0 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AGAGGTACGTCTACAACAACTAAG............................. 24 0 7 1.14 8 3 2 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GGTACGTCTACAACAACTAAGGAC.......................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TTTCCTAGCGTTCCCATTGTCAGAG............................................................................................................................ 25 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................CTCCTCGAGTTGCTAATATCTTCCTTA.................................................................. 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TCTGCGTCCTCGAGTTGCTAAT............................................................................ 22 0 4 1.00 4 0 0 0 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AATTTTCCTAGCGTTCCCATTGTCAGA............................................................................................................................. 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACAACAACTAAGGACCCTC...................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TAAATTCCTAGCGTTCCCATTGTCAGAG............................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................AGAGCTCTAGGTCGTAAGATT........................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................GGAGGTACGTCTACAACAACTAAGGAC.......................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTCGAGTTGCTAATATCTTCCTTA.................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................TATACTAGCGTTCCCATTGTCAGAG............................................................................................................................ 25 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGTCCTCGAGTTGCTAATATCTTCCTTA.................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TCTGCGTCCTCGAGTTGCTAATA........................................................................... 23 0 4 1.00 4 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................TAGCGTTCCCATTGTCAGAG............................................................................................................................ 20 0 4 1.00 4 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................AGAGGTACGTCTACAACAACTAAGGAC.......................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTAGATAGAGGTACGTCTACAACA................................... 24 0 7 0.86 6 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0
..........................................................................................CGTCCTCGAGTTGCTAATA........................................................................... 19 0 4 0.75 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGATAGAGGTACGTCTACAACAACTAAG............................. 28 0 7 0.57 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................GGTACGTCTACAACAACTAAGG............................ 22 0 7 0.57 4 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GAGGTACGTCTACAACAACTAAG............................. 23 0 7 0.57 4 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTAACCCTGCGTCCTCGAATTGCTAATA........................................................................... 28 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGACCCTCGTCGAGAACAACGTCGTA.... 26 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CTCTGCGTCCTCGAGTTGCTAAT............................................................................ 23 0 4 0.50 2 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGCTAGATAGAGGTACGTCTACAACA................................... 26 0 7 0.43 3 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATAGAGGTACGTCTACAACAACT................................ 24 0 7 0.43 3 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATAGAGGTACGTCTACAACAACTAAGG............................ 28 0 7 0.43 3 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGGTACGTCTACAACAACTAAGG............................ 23 0 7 0.43 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................ATAGAGGTACGTCTACAACAACTAAG............................. 26 0 7 0.43 3 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTCGAGTTGCTAATATCTTCC..................................................................... 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTGCGTCCTCGAGTTGCTAATATCTT....................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CGAGTTGCTAATATCTTCCTT................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CCTCGAGTTGCTAATATCTTCCT.................................................................... 23 0 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CTCGAGTTGCTAATATCTTCCTTT.................................................................. 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CCTCGAGTTGCTAATATCTTCCTT................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GCTAGATAGAGGTACGTCTACAACA................................... 25 0 7 0.29 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGATAGAGGTACGTCTACAACA................................... 22 0 7 0.29 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCGCTAGATAGAGGTACGTCTACAACA................................... 27 0 7 0.29 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................ATAGAGGTACGTCTACAACAACTA............................... 24 0 7 0.29 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGATAGAGGTACGTCTACAACAACTA............................... 26 0 7 0.29 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................CCTAGCGTTCCCATTGTCAGA............................................................................................................................. 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................CCATTGTCAGAGCTCTAGGTCGTA................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................AACTCTGCGTCCTCGAGTTGCTAAT............................................................................ 25 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGCTAGATAGAGGTACGTCTACAAC.................................... 25 0 8 0.25 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................GCGTTCCCATTGTCAGAG............................................................................................................................ 18 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................ACTCTGCGTCCTCGAGTTGCTAAT............................................................................ 24 0 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TAGCGTTCCCATTGTCAGAGC........................................................................................................................... 21 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTGCGTCCTCGAGTTGCTAATA........................................................................... 22 0 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................GTCTAGCGTTCCCATTGTCAGAG............................................................................................................................ 23 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AATCTGCGTCCTCGAGTTGCTAAT............................................................................ 24 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................ATAGCGTTCCCATTGTCAGAG............................................................................................................................ 21 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................ACTCTGCGTCCTCGAGTTGCTAATAT.......................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TCTAGGCCGCAAGATTATCC....................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................ACTCCGCTAGACAGCGGTACGTCT......................................... 24 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACTCCGCTAGGTAGAGGTACGTCT......................................... 24 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................ACTCCGCTAGATAGAGGTACGT........................................... 22 0 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CTCCGCTAGATAGAAGTACGTCT......................................... 23 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................CTCCGCTAGATAGAGGTACGTCT......................................... 23 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TAGGTACGTCTACAACAACTAAG............................. 23 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GCGGTACGTCTACAACAACTAAGG............................ 24 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGATAGAGGTACGTCTACAACAACTAA.............................. 27 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGATAGAGGTACGTCTACAACAACT................................ 25 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................TAGAGGTACGTCTACAACAACTAA.............................. 24 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTAGATAGAGGTACGTCTACAACAACTA............................... 28 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CTAGAGGTACGTCTACAACAACTAAGG............................ 27 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................ATATAGAGGTACGTCTACAACAACTAAG............................. 28 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GGTACGTCTACAACAACTAAGGA........................... 23 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TCCGCTAGATAGAGGTACGTCTACAACA................................... 28 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATAGAGGTACGTCTACAACAACTAAT............................. 27 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GGTACGTCTACAACAACTAAG............................. 21 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................ACGTCTACAACAACTAAG............................. 18 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGCTAGATAGAGGTACGTCTACAACAAC................................. 28 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TAGATAGAGGTACGTCTACAACA................................... 23 0 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTACGTCTACAACAACTAAGGA........................... 22 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AGAGGTACGTCTACAACAACTA............................... 22 0 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GATAGAGGTACGTCTACAACAACTAAG............................. 27 0 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTCGCTAGATAGAGGTACGTCTACAACA................................... 28 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AGAGGTACGTCTACAACAACTAA.............................. 23 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GCTAGATAGAGGTACGTCTACAAC.................................... 24 0 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TTTCCGCTAGATAGAGGTACGTCT......................................... 24 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................GCTAGATAGAGGTACGTCT......................................... 19 0 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................CCGCTAGATAGAGGTACGTCT......................................... 21 0 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................AGATAGAGGTACGTCTACAA..................................... 20 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................TTCCGCTAGATAGAGGTACGTCT......................................... 23 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TCCGCTAGATAGAGGTACGTCT......................................... 22 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................CGCTAGATAGAGGTACGTCT......................................... 20 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................CCGCTAGATAGAGGTACGTCTACAAC.................................... 26 0 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GCTAGATAGAGGTACGTCTACA...................................... 22 0 8 0.13 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........CGATGAATCCCTTAGGTTTA............................................................................................................................................................ 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................CCTAAGACTCTCCTAGATA.................................................... 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................AGGTACGTCTTCAGTAACTA............................... 20 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................GAGGTACGTCTTGAACAGCT................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TAGGTACGCCTAAAACAAC................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................GTCTAGGCCGCAAGATTA.......................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13324:1115103-1115286 - dvi_149 AGTGCCATGCTGCTTACGAAATCCAAATTGAA-------ATTTAAGGATCGC--------------------------------------AAGGGTAACA-----------GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------TAAGAAT-----------------------------T---GAGAC----------------------------GCAGGAGCTCAACGATTATAGAAGGAATCTGAGGCGATCTATCTCCATGCAGATGTTGTTGATT--------CCTGGGAGCAGCTCTTGTTGCAGCATATAT
droMoj3 scaffold_794:512-619 + AGCAGAATGCGCCTTGCGGAATCCAAATTGAT-------GATTTGGAATCGC--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAGTATTTTAGA---------------------------------------------------------------------------------------------------------GA---------------------------------------G
droGri2 scaffold_8459:8241-8271 + CGTGCCATGGTTCTTTCTAAATCCAAATTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004884:145371-145548 + TGTACCATGCTGACTCCTGAAGCCAAAAAAAAAAAAAGTGATTCAGGATGGC--------------------------------------TATCAAGGT-------------------GTGCCAGTA-CTC-----TACCAAGAAGTATAGTATAGAAGTTTAAAAAGCAATACGTTTTTAGAGCAGTTCAGCGGCAAAGTCAATATCAGCTGCTA-----------------------------------------------------------------------------------------------------------ACGTAAGCTCGATT--------TCTGGATGCAG-------------------
dp5 XR_group5:8546-8655 - TGA---GTGCTGAGTTCTGAAGCCAAATTGAT-------GGTTAGGAATAGC--------------------------------------CATGGCGAAG-----------CTTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CCTG--------------------------
droPer2 scaffold_1930:4552-4662 - TGA---GTGCTGACTTCTAAAGCCAAATTGAT-------GGTTTGGAATAGC--------------------------------------CATGGCAAAG-----------CTTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGGCGTTCAAAGATTTTGGA---------------------------------------------------------------------------------------------------------GA-------------------------------AGCCTG--A
droAna3 scaffold_12905:336376-336610 - A------TGTTGAAGTCGAAAGCCGAACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTCTCGTCAGAAAGTA-GTC-----TTT-------------------------------------------------------------TCAGGATCAGTCTTTCCACGATTTTTCCCAGAGATGGTAGTAGACTAATGGGCCTGTATGAGTCTACGTCAGTTAGCGACTTTCCAGGTTTT---GGGATCATGTGTATGTCTAAAAGTATCTGCACTTCGGTGATT--------GCTGGGTGCAGCTATCTCAGCAGCCTGGTT
droBip1 scf7180000395674:18601-18701 - TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT----------------------------TAAGGAGCGCACAAATTCTAGGTGGTAGCTGGGGATGTCTAGAAGTTTCTGTATGTTGATGATT--------GCTGGGTGCAGCTATCTCAGCAGCATAGTT
droKik1 scf7180000301802:12987-13123 + TCTCCTGTTCTAG---------------------------------CATATT--------------------------------------CACTACGAAC-----------T--------------------CTTCGC-------------------------------------------------------------------------------------------------TT---AAGTC----------------------------TAAGCAGTGCTAAAATTCTGGGAGGAAGTTGGGGAGGTCTAGGGCCCACTACTTCATGTCGATT--------TCTGGGGGCAGCAAGCTGAGCAGCCTCAGA
droFic1 scf7180000453956:11261-11361 - TTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT----------------------------TGAGAAGTGCCGCGATTCTGGGAGGTAGTTTGAGATGTCTAGAGGTCTCTGTATTTTGGCGATC--------TCTGCATGCAGCTGTATCAGCAGCCTGGTT
droEle1 scf7180000490510:18020-18103 + AGTGCCGTGCTGTAGGCGGAAACCGAACTGGA-------ATTTCGGGATCGC--------------------------------------TCTGGTGACA-----------TTTTCGAAAGTTAGTA-GCC-----TGT-------------------------------------------------------------TTAGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000772082:4162-4262 - TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC----------------------------GGAGGAGTTCGATGATTGCAGGAGGAAGCTGAAGCTGTCGTTGTTCATTCGCATGCTGCCGGTT--------TCTAGGAGCAGCTCTTGTTGCAGCTTATGT
droBia1 scf7180000302168:126622-126722 - TTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT----------------------------TGAGAAGTGTCACAATTCTGGGAGGAAGCTGGAGATGTCTAAGGGTATCCGTATTTTGGCGATT--------TCTGGGTGCAGCTATCTCAGTAGCCGGTAT
droTak1 scf7180000413742:3507-3590 - AGTGCCGTGCTGTAGGCGGAAACCGAACTGGA-------ATTTCGGGATCGC--------------------------------------TCTGGTGACA-----------TTTTCGAAAGTTAGTA-GCC-----TGT-------------------------------------------------------------TTAGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409196:67374-67593 - AGTTCCATGTTGAAGACGAAAGCCAAAGCGAA-------CACTTCAGCTTTTTCTAGCTAGTACAGCACCAACCGCCTGAAGGGTTTCTAATGGCTGATTATGGGCTGAGCCTTATAC------CG------TTTCGT-------------------------------------------------------------------------------------------------TA---TAGAT----------------------------TGAGAAGTGCCCAATTTCTGGGTTGAAGCTGGAGATGTTAAGGGGTCTCTGTACTTTGAAGATT--------TCTGGGTGCAGCTATCTCAGCAGCTTGGTT
dm3 chr3L:24247149-24247252 + GGA------------------------------------ATTTGGGGATCGC--------------------------------------TTTGGTAATA-----------TTTTAGAAAGCGAGCA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATAATTTTTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------CGATTT
droSim2 2l:23384912-23385012 + TTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC----------------------------GAAGGAGATCAACTATTGCAGAAGGTAGGAGCGACTGGACAAAGGCTTGTGTATTGCGTGGAGC--------ACTCGGAGTAGCATGTGTTGCTGCTTCTTT
droSec2 scaffold_1104:3794-3885 - AGTACCGTGCTGCAACCGGAAGCCAAACTGAA-------ATTTGGGAATCGC--------------------------------------TTTGGTAACA-----------TCCTTGCAAGTGAGCATGAC-----CGA-------------------------------------------------------------ACAG-------------------------------GAAAGCAGA----------------------------------------------------------------------------------------------------------------------------------C
droYak3 2R:769563-769663 + TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC----------------------------GTAGGAGGTCAACTGTTACAGAAGTCAGGGGCGACTGGATAAAGGCTTGGGCATTGCGTGGAGT--------ACTCGGTGCCGCATGTGCTGCTGCTTCTTC
droEre2 scaffold_4784:25695235-25695418 - TGTGCCATGCTGGATCTT-------------------------TGGTTTTAA--------------------------------------TTTAGAGACAAGATACTGAGTTCTTTAAGAGTAAGATCAACCCTTCGT-------------------------------------------------------------------------------------------------TT---AAGCC----------------------------GAAGAAGATTAGCTATTGTGGAGGATACTTGAGGCTGATGGAAAGTTTGTACATTTTGTAGATTTATATTATATTGTATACAGCGCATGCTGCAGTTTGTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGTGCCATGCTGCTTACGAAATCCAAATTGAA-------ATTTAAGGATCGC--------------------------------------AAGGGTAACA-----------GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------TAAGAAT-----------------------------T---GAGAC----------------------------GCAGGAGCTCAACGATTATAGAAGGAATCTGAGGCGATCTATCTCCATGCAGATGTTGTTGATT--------CCTGGGAGCAGCTCTTGTTGCAGCATATATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------...............................................................................................................................................................................271111.0011110605000000030000000201521898100017099735000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTTG.............25283.501670000113220120114000000030014813145200053656623000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTTGT............26230.0060000030501000100000000003357301005084272000000000000000000000000
...................................................................................................................................................................................................................................................................................................TAGAAGGAATCTGAGGCGATCTATC...........................................................25123.0023208100002000010000000000021200001001100000000000000000000001000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----T..............................................................................................................................................................................................................................................25421.00840080802000001000000000073525420064141020100000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----...............................................................................................................................................................................................................................................24419.75790015110200000300000000004473752014122267000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----TA.............................................................................................................................................................................................................................................26119.0019002000001000200000000002302000000010213000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTGTTGATT--------CCTGGGAGCAGCTCTTG.............26115.0015002010200000000000000001001100002001310000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TT.....................................................................................................................................................................................................................................................2349.0036000060000000010000000003254350000021021000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCT...............2328.5017000020300000000000000004110200000200002000000000000000000000000
...................................................................................................................................................................................................................................................................................................TAGAAGGAATCTGAGGCGATCTATCT..........................................................2618.008103001100000000000000000001000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTGTTGATT--------CCTGGGAGCAGCTCTTGT............2716.006002000000000000000000000000200000000110000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTTGTT...........2726.0012000010201000100000000000121100000001010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTGTTGATT--------CCTGGGAGCAGCTCT...............2416.006000000100000000000000002000000001000200000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATAGAAGGAATCTGAGGCGATCTA.............................................................2515.005001000000000000000000000000200000000110000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTT..............2424.509000000000000000000000000112101000001011000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATAGAAGGAATCTGAGGCGATCTATC...........................................................2714.004000000000010000000000000010100000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCAACGATTATAGAAGGAATCTGA......................................................................2414.004000010000001000000000000010000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTGTTGATT--------CCTGGGAGCAGCTC................2313.003000000000000000000000000010100001000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTGTTGATT--------CCTGGGAGCAGCTCTT..............2513.003002000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAACGATTATAGAAGGAATCTGA......................................................................2313.003000000300000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAACGATTATAGAAGGAATCTGAG.....................................................................2413.003000000000000000000000001101000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TAGAAGGAATCTGAGGCGATCTATCTCC........................................................2813.003003000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAGATGTTGTTGATT--------CCTGGGAGC.....................2413.003000000000010000000000000100100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTC................2223.006000000100000000000000001200000001000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGATT--------CCTGGGAGCAGCTCTTGTTG..........2522.505000010100000000000000000001000000001001000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-.......................................................................................................................................................................................................................................................2142.5010001000200000000000000003101010000100000000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGC.........................................................................................................................................................................................................................................................2042.259000010000000000000000000021010000020002000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-T......................................................................................................................................................................................................................................................2242.259001000000000000000000001000011000103001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCCATGCAGATGTTGTTGATT--------CCTGG.........................2612.002000000000000000000000000000000000010100000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAACGATTATAGAAGGAATCTGAGGCG..................................................................2712.002000000000000000000000001000000001000000000000000000000000000000
................................................................................................AACA-----------GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------...............................................................................................................................................................................2612.002001000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATAGAAGGAATCTGAGGCGATC...............................................................2312.002000000000020000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAGATGTTGTTGATT--------CCTGGGAGCAGC..................2712.002001000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCAACGATTATAGAAGGAATCTGAGG....................................................................2612.002000000000000010000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAACGATTATAGAAGGAATCTGAGGC...................................................................2612.002000000000000000000000001010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGC..................2021.503000100000000100000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTGATT--------CCTGGGAGCAGCTCTTGTT...........2521.503002000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GATT--------CCTGGGAGCAGCTCTTG.............2121.503000000000000000000000000000000000000003000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------TA.............................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAACGATTATAGAAGGAAT..........................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GTTGTTGATT--------CCTGGGAGCAGCTCT...............2511.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................................A-----------GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------...............................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TAGAAGGAATCTGAGGCGATCTA.............................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATAGAAGGAATCTGAGGCGATCTATC...........................................................2611.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCAACGATTATAGAAGGAATCTGAG.....................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................TCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------TAAGAAT-----------------------------T---.......................................................................................................................................2711.001000010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTGATT--------CCTGGGAGCAGCTCTTGTTG..........2621.002002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTTC.............2521.002000010000000000000000000000000000000000100000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------T..............................................................................................................................................................................2811.001000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................TCCAGCA-TTC-----TAA-------------------------------------------------------------TAAGAAT-----------------------------T---GAGAC----------------------------G.....................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCAACGATTATAGAAGGAATCTGAGGCG..................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TAGAAGGAATCTGAGGCGATCT..............................................................2211.001000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................AGCA-TTC-----TAA-------------------------------------------------------------TAAGAAT-----------------------------T---GAGAC----------------------------GCAG..................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATAGAAGGAATCTGAGGCGATCT..............................................................2411.001000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTGTTGATT--------CCTGGGAGCAGC..................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................CAGATGTTGTTGATT--------CCTGGGAGCAG...................2611.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCT.................2121.002000000000000000000000000000000000011000000000000000000000000000
...............................................................................................................GTCTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------...............................................................................................................................................................................2211.001000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TGTTGTTGATT--------CCTGGGAGCAGCTC................2511.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................CTCGAGATCCAGCA-TTC-----TAA-------------------------------------------------------------...............................................................................................................................................................................2011.001000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCAACGATTATAGAAGGAATCTGAGGC...................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................GCAGATGTTGTTGATT--------CCTGGGAGC.....................2511.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCTATCTCCATGCAGATGTTGTTGAT.......................................2670.866000000200000000000000000000020100000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGATT--------CCTGGGAGCAGCTCTTGTTGCAA.......2820.501000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTTGTC...........2720.501000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTTGTTG..........2820.501000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................T--------CCTGGGAGCAGCTCTTGTTGCAGC......2520.501000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTGATT--------CCTGGGAGCAGCTCTTGTTGC.........2720.501001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGATT--------CCTGGGAGCAGCTCTTGTT...........2420.501000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCAGCTCTTGTA...........2720.501000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTGATT--------CCTGGGAGCAGCTCTTG.............2320.501000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTTGATT--------CCTGGGAGCA....................1820.501000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTTGATT--------CCTGGGAGCAGCTCTTG.............2420.501000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TTGATT--------CCTGGGAGCAGCTCTTGTTA..........2620.501000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTTGATT--------CCTGGGAGCAGCTCTTGTTGC.........2820.501001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TT--------CCTGGGAGCAGCTCTTG.............1920.501000000001000000000000000000000000000000000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAG..........................................................................................................................................................................................................................................................1940.502000010000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CGATCTATCTCCATGCAGATGTTGT...........................................2570.433000000000000000000000000001011000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCTATCTCCATGCAGATGTTGTTGATT--------..............................2770.292000000000000000000000000000000100000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GATCTATCTCCATGCAGATGTTGT...........................................2470.292000000110000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCTATCTCCATGCAGATGTTGTTGA........................................2570.292000000000000000000000000000011000000000000000000000000000000000
...............................................ATCGC--------------------------------------AAGGGTAACA-----------GTCTCGAGATC.............................................................................................................................................................................................................................................................2640.251000000000000000000000000000000000001000000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTA-----A..............................................................................................................................................................................................................................................2540.251000000000000000000000000000000000000001000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----TTC-------------------------------------------------------------...............................................................................................................................................................................2740.251000000000000000000000000000000000100000000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----TAT-------------------------------------------------------------...............................................................................................................................................................................2740.251000000000000000000000000000000000000001000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTT-----...............................................................................................................................................................................................................................................2440.251000010000000000000000000000000000000000000000000000000000000000
................................................................................................AACA-----------GTCTCGAGATCCAGCA-TTC-----T..............................................................................................................................................................................................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
...........................................................................................AGGGTAACA-----------GTCTCGAGATCCAGCA-.......................................................................................................................................................................................................................................................2540.251000000000000000000000000001000000000000000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCA...........................................................................................................................................................................................................................................................1840.251000000000000000000000000000100000000000000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGCA-TTC-----TT.............................................................................................................................................................................................................................................2640.251000000000000000000000000000010000000000000000000000000000000000
...............................................................................................TAACA-----------GTCTCGAGATCCAGTC-A......................................................................................................................................................................................................................................................2250.201000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CTGAGGCGATCTATCTCCATGCAGATG...............................................2760.171000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CGATCTATCTCCATGCAGATGTTGTT..........................................2670.141000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ATCTATCTCCATGCAGATGTTGT...........................................2370.141000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCCATGCAGATGTTGTTG.........................................1870.141000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TCTATCTCCATGCAGATGTTGT...........................................2270.141000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCCATGCAGATGTTGTTGATT--------C.............................2270.141000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CGATCTATCTCCATGCAGATGT..............................................2280.131000000000000000000000000001000000000000000000000000000000000000
droMoj3
AGCAGAATGCGCCTTGCGGAATCCAAATTGAT-------GATTTGGAATCGC--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAGTATTTTAGA---------------------------------------------------------------------------------------------------------GA---------------------------------------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................TACAAGA-----------GTATCTTGCTCCAGCA-TAC-----...............................................................................................................................................................................................................................................26202.40484210050
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGCA-.......................................................................................................................................................................................................................................................25201.65330100275
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGC.........................................................................................................................................................................................................................................................24201.45292810000
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGCA-TA.....................................................................................................................................................................................................................................................27200.95191101052
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCA-.......................................................................................................................................................................................................................................................26200.80160000142
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGCA-TAC-----...............................................................................................................................................................................................................................................28200.6012000084
............................................................................................TTACAAGA-----------GTATCTTGCTCCAGCA-.......................................................................................................................................................................................................................................................24200.55111100000
.............................................................................................TACAAGA-----------GTATCTTGCTCCAGCA-TA.....................................................................................................................................................................................................................................................25200.459410031
.............................................................................................TACAAGA-----------GTATCTTGCTCCAGCA-TAC-----GG.............................................................................................................................................................................................................................................28200.459800010
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAG..........................................................................................................................................................................................................................................................24200.357700000
................................................................................................................................TAC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAG............................................................................................................................................................25200.357700000
..............TGCGGAATCCAAATTGAT-------GATTTGG.........................................................................................................................................................................................................................................................................................................................................25200.357600010
...........................TTGAT-------GATTTGGAATCGC--------------------------------------ATTTACA......................................................................................................................................................................................................................................................................................25200.306500010
...........CCTTGCGGAATCCAAATTGAT-------GATT............................................................................................................................................................................................................................................................................................................................................25200.255300020
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCA-TA.....................................................................................................................................................................................................................................................28200.255400001
..........................................TTGGAATCGC--------------------------------------ATTTACAAGA-----------GTATC...................................................................................................................................................................................................................................................................25200.255300020
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCA-TAC-----...............................................................................................................................................................................................................................................29200.255500000
.............................................................................................TACAAGA-----------GTATCTTGCTCCAGCA-T......................................................................................................................................................................................................................................................24200.204300010
.................................................................................................................................AC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAGTAT.........................................................................................................................................................27200.204400000
...............................................................................................CAAGA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------...............................................................................................................................................................................27200.204210001
..............TGCGGAATCCAAATTGAT-------GATTTGGA........................................................................................................................................................................................................................................................................................................................................26200.204300010
..................................................................................................GA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------...............................................................................................................................................................................24200.204000040
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGCA-A......................................................................................................................................................................................................................................................26200.204400000
.............................................................................................TACAAGA-----------GTATCTTGCTCCAGC.........................................................................................................................................................................................................................................................22200.153300000
..................................................................................................................TCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATC.......................................................................................................................................................................27200.153300000
..................................................................................................................TCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TC.............................................................................................................................................................................21200.153300000
..................................................................................................GA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------T..............................................................................................................................................................................25200.153000030
..............................................................................................ACAAGA-----------GTATCTTGCTCCAGC.........................................................................................................................................................................................................................................................21200.153300000
...........................TTGAT-------GATTTGGAATCGC--------------------------------------ATT..........................................................................................................................................................................................................................................................................................21200.153110010
........................AAATTGAT-------GATTTGGAATCGC--------------------------------------.............................................................................................................................................................................................................................................................................................21200.153200010
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAG..........................................................................................................................................................................................................................................................23200.153300000
...........................TTGAT-------GATTTGGAATCGC--------------------------------------ATTTACAA.....................................................................................................................................................................................................................................................................................26200.153300000
........................................................................................................................TCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATAC.................................................................................................................................................................27200.153300000
..................................................................................................................TCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAA.........................................................................................................................................................................25200.153300000
...............................................................................................CAAGA-----------GTATCTTGCTCCAGCA-TAC-----GG.............................................................................................................................................................................................................................................26200.153300000
...AGAATGCGCCTTGCGGAATCCAAATTG.........................................................................................................................................................................................................................................................................................................................................................27180.112100001
.........................AATTGAT-------GATTTGGAATCGC--------------------------------------A............................................................................................................................................................................................................................................................................................21200.102200000
..............................................................................................ACAAGA-----------GTATCTTGCTCCAGCA-TAC-----...............................................................................................................................................................................................................................................25200.102200000
...........................TTGAT-------GATTTGGAATCGC--------------------------------------.............................................................................................................................................................................................................................................................................................18200.102000020
............................................................................................TTACAAGA-----------GTATCTTGCTCCAGCA-T......................................................................................................................................................................................................................................................25200.102200000
.........................AATTGAT-------GATTTGGAATCGC--------------------------------------ATT..........................................................................................................................................................................................................................................................................................23200.102200000
........................AAATTGAT-------GATTTGGAATCGC--------------------------------------ATT..........................................................................................................................................................................................................................................................................................24200.102200000
....................................................................................................................TTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAG.....................................................................................................................................................................27200.102200000
..............................................AATCGC--------------------------------------ATTTACAAGA-----------GTATCTTGC...............................................................................................................................................................................................................................................................25200.102110000
.............TTGCGGAATCCAAATTGAT-------GATTTGG.........................................................................................................................................................................................................................................................................................................................................26200.102200000
................................................TCGC--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCAG..........................................................................................................................................................................................................................................................28200.102200000
...........CCTTGCGGAATCCAAATTGAT-------GATTTG..........................................................................................................................................................................................................................................................................................................................................27200.102000020
................................................................................................................TATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAA..........................................................................................................................................................................26200.102200000
.................................................................................................AGA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------...............................................................................................................................................................................25200.102200000
............................TGAT-------GATTTGGAATCGC--------------------------------------ATTTACAAGA-----------G.......................................................................................................................................................................................................................................................................28200.102200000
............................................................................................................................GCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAG............................................................................................................................................................28200.102100010
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCC............................................................................................................................................................................................................................................................22200.102200000
.............TTGCGGAATCCAAATTGAT-------GATTTG..........................................................................................................................................................................................................................................................................................................................................25200.102200000
...........................TTGAT-------GATTTGGAATCGC--------------------------------------ATTTAC.......................................................................................................................................................................................................................................................................................24200.102000020
..............TGCGGAATCCAAATTGAT-------GATTTG..........................................................................................................................................................................................................................................................................................................................................24200.102000020
.................................................................................................................................AC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAG............................................................................................................................................................24200.102200000
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGCA-C......................................................................................................................................................................................................................................................26200.102100010
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGC.........................................................................................................................................................................................................................................................25200.102010001
..............................................................................................ACAAGA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------...............................................................................................................................................................................28200.102200000
..CAGAATGCGCCTTGCGGAATCCC..............................................................................................................................................................................................................................................................................................................................................................23180.061100000
..CAGAATGCGCCTTGCGGAATC................................................................................................................................................................................................................................................................................................................................................................21180.061000010
.GCAGAATGCGCCTTGCGGAAT.................................................................................................................................................................................................................................................................................................................................................................21180.061000001
..CAGAATGCGCCTTGCGGAATCCAAA............................................................................................................................................................................................................................................................................................................................................................25180.061100000
...AGAATGCGCCTTGCGGAATCCAAAT...........................................................................................................................................................................................................................................................................................................................................................25180.061000010
AGCAGAATGCGCCTTGCGGATC.................................................................................................................................................................................................................................................................................................................................................................22180.061100000
...AGAATGCGCCTTGCGGAATCCAAATT..........................................................................................................................................................................................................................................................................................................................................................26180.061000010
.........................................................................................................................CCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATA..................................................................................................................................................................25200.051100000
............................TGAT-------GATTTGGAATCGC--------------------------------------ATTTACAAG....................................................................................................................................................................................................................................................................................26200.051100000
...........................TTGAT-------GATTTGGAATCGC--------------------------------------ATTTACAAG....................................................................................................................................................................................................................................................................................27200.051000001
.................................................................................................................ATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCA............................................................................................................................................................................23200.051100000
................................................................................................................................TAC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAGT...........................................................................................................................................................26200.051000001
.......................CAAATTGAT-------GATTTGGAATCG....................................................................................................................................................................................................................................................................................................................................21200.051100000
................................................................................................................................TAC-----GGC-------------------------------------------------------------TCAAAATCAGATACTCAAGC...........................................................................................................................................................26200.051100000
................CGGAATCCAAATTGAT-------GATTTGGAATC.....................................................................................................................................................................................................................................................................................................................................27200.051100000
........................................................................................................................................................................................................TCAAAATCAGATACTCAAGT...........................................................................................................................................................20200.051100000
................................................................................................AAGA-----------GTATCTTGCTCCAGCA-.......................................................................................................................................................................................................................................................20200.051000010
.........................................................................................................................CCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATAA.................................................................................................................................................................26200.051100000
..........GCCTTGCGGAATCCAAATTGAT-------GATT............................................................................................................................................................................................................................................................................................................................................26200.051000010
................CGGAATCCAAATTGAT-------GATTTGGA........................................................................................................................................................................................................................................................................................................................................24200.051100000
..........................................................................................................................CAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCA......................................................................................................................................................................20200.051100000
......ATGCGCCTTGCGGAATCCAAA............................................................................................................................................................................................................................................................................................................................................................21200.051100000
........................................................................................................................................................................................................TCAAAATCAGATACTCAAGA...........................................................................................................................................................20200.051100000
..............................................................................................ACAAGA-----------GTATCTTGCTCCAGCA-TA.....................................................................................................................................................................................................................................................24200.051100000
...................................................................................................A-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAA..........................................................................................................................................................................28200.051100000
..................................................GC--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCAGCA-.......................................................................................................................................................................................................................................................28200.051000010
...............GCGGAATCCAAATTGAT-------GATTTGGAAT......................................................................................................................................................................................................................................................................................................................................27200.051100000
.......TGCGCCTTGCGGAATCCAAATTGAT-------GAT.............................................................................................................................................................................................................................................................................................................................................28200.051000001
...................................................C--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCAG..........................................................................................................................................................................................................................................................25200.051100000
................................................................................................................TATCTTGCTCCAGCA-TAC-----...............................................................................................................................................................................................................................................18200.051100000
......ATGCGCCTTGCGGAATCC...............................................................................................................................................................................................................................................................................................................................................................18200.051100000
.........................................TTTGGAATCGC--------------------------------------ATTTACAAGA-----------GTATCT..................................................................................................................................................................................................................................................................27200.051100000
..........GCCTTGCGGAATCCAAATTGAT-------GAC.............................................................................................................................................................................................................................................................................................................................................25200.051000010
................CGGAATCCAAATTGAT-------GATTTGGTT.......................................................................................................................................................................................................................................................................................................................................25200.051100000
....GAATGCGCCTTGCGGAATCCA..............................................................................................................................................................................................................................................................................................................................................................21200.051100000
........................................................................................................................TCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATA..................................................................................................................................................................26200.051100000
.............................................................................................TACAAGA-----------GTATCTTGCTCCAGCA-TAC-----A..............................................................................................................................................................................................................................................27200.051100000
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCA-TC.....................................................................................................................................................................................................................................................28200.051100000
..........................................................................................................................................C-------------------------------------------------------------TCAAAATCAGATACTCAAGT...........................................................................................................................................................21200.051100000
.............................................................................................TACAAGA-----------GTATCTTGCTCC............................................................................................................................................................................................................................................................19200.051000010
...............GCGGAATCCAAATTGAT-------GATTTGG.........................................................................................................................................................................................................................................................................................................................................24200.051100000
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCA-C......................................................................................................................................................................................................................................................27200.051000010
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCA-A......................................................................................................................................................................................................................................................27200.051000001
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCT-.......................................................................................................................................................................................................................................................26200.051100000
..................................................................................................GA-----------GTATCTTGCTCCAGCA-TAC-----...............................................................................................................................................................................................................................................21200.051100000
................................................................................................................................TAC-----GGC-------------------------------------------------------------TCAAAATCAGATACTC...............................................................................................................................................................22200.051100000
...................................................C--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCAGCA-T......................................................................................................................................................................................................................................................28200.051100000
........................................................................................................................TCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGA....................................................................................................................................................................24200.051100000
..................................................................................................................................C-----GGC-------------------------------------------------------------TCAAAATCAGATACTC...............................................................................................................................................................20200.051100000
...........................TTGAT-------GATTTGGAATCGC--------------------------------------A............................................................................................................................................................................................................................................................................................19200.051000010
................................................................................................................TATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAA.........................................................................................................................................................................27200.051100000
.........................................TTTGGAATCGC--------------------------------------ATTTACAAGA-----------........................................................................................................................................................................................................................................................................21200.051000010
...............................................................................................CAAGA-----------GTATCTTGCTCCAGCA-T......................................................................................................................................................................................................................................................22200.051100000
................................................TCGC--------------------------------------ATTTACAAGA-----------GTATCTTGCTCC............................................................................................................................................................................................................................................................26200.051100000
........................AAATTGAT-------GATTTGGAATCGC--------------------------------------A............................................................................................................................................................................................................................................................................................22200.051100000
............................................................................................TTACAAGA-----------GTATCTTGCTCC............................................................................................................................................................................................................................................................20200.051000010
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGCA-TT.....................................................................................................................................................................................................................................................27200.051100000
....................................................................................................................TTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGA....................................................................................................................................................................28200.051100000
.................................................CGC--------------------------------------ATTTACAAGA-----------GTATCTTGC...............................................................................................................................................................................................................................................................22200.051100000
..............TGCGGAATCCAAATTGAT-------GATTTGGAA.......................................................................................................................................................................................................................................................................................................................................27200.051010000
.........................AATTGAT-------GATTTGGAATCGC--------------------------------------.............................................................................................................................................................................................................................................................................................20200.051100000
..................................................GC--------------------------------------ATTTACAAGA-----------GTATCTTGC...............................................................................................................................................................................................................................................................21200.051100000
..........................................................................................ATTTACAAGA-----------GTATCTTGCTC.............................................................................................................................................................................................................................................................21200.051010000
...........................................................................................TTTACAAGA-----------GTATCTTGCTCC............................................................................................................................................................................................................................................................21200.051010000
........................AAATTGAT-------GATTTGGAATCGC--------------------------------------ATTC.........................................................................................................................................................................................................................................................................................25200.051000001
..............................AT-------GATTTGGAATCGC--------------------------------------ATTTACAAGA-----------GT......................................................................................................................................................................................................................................................................27200.051000001
..............................AT-------GATTTGGAATCGC--------------------------------------ATTTA........................................................................................................................................................................................................................................................................................20200.051100000
................................................................................................................TATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TC.............................................................................................................................................................................23200.051100000
.........CGCCTTGCGGAATCCAAATTGAT-------GAT.............................................................................................................................................................................................................................................................................................................................................26200.051000010
..........GCCTTGCGGAATCCAAATTGAT-------GA..............................................................................................................................................................................................................................................................................................................................................24200.051000010
........................AAATTGAT-------GATTTGGAATCGC--------------------------------------ATTT.........................................................................................................................................................................................................................................................................................25200.051100000
........................AAATTGAT-------GATTTGGAATCGT--------------------------------------.............................................................................................................................................................................................................................................................................................21200.051100000
...........................................................................................TTTACAAGA-----------GTATCTTGCTCCAGCA-T......................................................................................................................................................................................................................................................26200.051010000
...........................TTGAT-------GATTTGGAATCGC--------------------------------------ATTT.........................................................................................................................................................................................................................................................................................22200.051100000
.........................AATTGAT-------GATTTGGAATCG....................................................................................................................................................................................................................................................................................................................................19200.051100000
...........................................................................................TTTACAAGA-----------GTATCTTGCTC.............................................................................................................................................................................................................................................................20200.051000010
.................................................CGC--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCA...........................................................................................................................................................................................................................................................26200.051100000
...................................................................................................A-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TC.............................................................................................................................................................................25200.051100000
..........................................................................................................................CAGCA-TAC-----GGC-------------------------------------------------------------TCAAAATCAGATAC.................................................................................................................................................................25200.051000010
..........GCCTTGCGGAATCCAAATTGAT-------GAT.............................................................................................................................................................................................................................................................................................................................................25200.051000001
.....................................................................................................................TGCTCCAGCA-TAC-----GGC-------------------------------------------------------------TCA............................................................................................................................................................................19200.051100000
...........CCTTGCGGAATCCAAATTGAT-------GAT.............................................................................................................................................................................................................................................................................................................................................24200.051100000
................................................................................................AAGA-----------GTATCTTGCTCCAGCA-TAC-----GGC-------------------------------------------------------------...............................................................................................................................................................................26200.051100000
...................................................C--------------------------------------ATTTACAAGA-----------GTATCTTGCTCCAGC.........................................................................................................................................................................................................................................................26200.051100000
.........CGCCTTGCGGAATCCAAATTGAT-------GATT............................................................................................................................................................................................................................................................................................................................................27200.051000010
................................................................................................AAGA-----------GTATCTTGCTCCAGCA-TAC-----G..............................................................................................................................................................................................................................................24200.051100000
..........GCCTTGCGGAATCCAAATTGAT-------GATTC...........................................................................................................................................................................................................................................................................................................................................27200.051100000
..............................AT-------GATTTGGAATCGC--------------------------------------ATTTACAAGA-----------GTA.....................................................................................................................................................................................................................................................................28200.051100000
................CGGAATCCAAATTGAT-------GATTTG..........................................................................................................................................................................................................................................................................................................................................22200.051100000
........................................................................................................................................GGC-------------------------------------------------------------TCAAAATCAGATACTCAAGTAT.........................................................................................................................................................25200.051100000
..............................................................................................ACAAGA-----------GTATCTTGCTCCAGCA-T......................................................................................................................................................................................................................................................23200.051100000
..........................................................................................ATTTACAAGA-----------GTATCTTGCTCCAGCA-T......................................................................................................................................................................................................................................................27200.051000010
............................TGAT-------GATTTGGAATCGC--------------------------------------ATTTACA......................................................................................................................................................................................................................................................................................24200.051100000
droGri2
CGTGCCATGGTTCTTTCTAAATCCAAATTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TGTACCATGCTGACTCCTGAAGCCAAAAAAAAAAAAAGTGATTCAGGATGGC--------------------------------------TATCAAGGT-------------------GTGCCAGTA-CTC-----TACCAAGAAGTATAGTATAGAAGTTTAAAAAGCAATACGTTTTTAGAGCAGTTCAGCGGCAAAGTCAATATCAGCTGCTA-----------------------------------------------------------------------------------------------------------ACGTAAGCTCGATT--------TCTGGATGCAG-------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..TACCATGCTGACTCCTGAAGCCA..............................................................................................................................................................................................................................................................................................................................................................2340.25101000
..TACCATGCTGACTCCTGAAGCCAAA............................................................................................................................................................................................................................................................................................................................................................2540.25101000
.............................................................................................................................................................................................CAGCGGCAAAGTCAATATCA......................................................................................................................................................................2050.20100100
dp5
TGA---GTGCTGAGTTCTGAAGCCAAATTGAT-------GGTTAGGAATAGC--------------------------------------CATGGCGAAG-----------CTTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CCTG--------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........TGAGTTCTGAAGCCAAATTGAT-------GG..............................................................................................................................................................................................................................................................................................................................................24230.506105600000500
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAG...........................................................................................................................................................................24319.6759032000002700
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TG.............................................................................................................................................................................22316.334904900000000
...........GAGTTCTGAAGCCAAATTGAT-------GG..............................................................................................................................................................................................................................................................................................................................................23216.003203110000000
..........TGAGTTCTGAAGCCAAATTGAT-------G...............................................................................................................................................................................................................................................................................................................................................23211.502302100002000
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGG..........................................................................................................................................................................25310.673203100000100
................................................................................................................TTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TG.............................................................................................................................................................................23310.333103100000000
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGA............................................................................................................................................................................2339.332802710000000
......................................................................................................................................................................................................................TCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CCTG--------------------------2228.501701000000610
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGA.........................................................................................................................................................................2638.332501800000610
..........TGAGTTCTGAAGCCAAATTGAT-------GGT.............................................................................................................................................................................................................................................................................................................................................2526.00120800010300
...........GAGTTCTGAAGCCAAATTGAT-------GGTT............................................................................................................................................................................................................................................................................................................................................2525.501101100000000
................................................................................................................TTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAG...........................................................................................................................................................................2535.001501100000400
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGA..........................................................................................................................................................................2534.671401400000000
................................................................................................................TTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGG..........................................................................................................................................................................2634.671401100000300
..............TTCTGAAGCCAAATTGAT-------GGTTAGG.........................................................................................................................................................................................................................................................................................................................................2524.5090900000000
...........GAGTTCTGAAGCCAAATTGAT-------GGT.............................................................................................................................................................................................................................................................................................................................................2424.0080800000000
...........GAGTTCTGAAGCCAAATTGAT-------G...............................................................................................................................................................................................................................................................................................................................................2224.0080800000000
................................................................................................................TTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGA............................................................................................................................................................................2433.671101000000100
..........TGAGTTCTGAAGCCAAATTGAT-------GGTT............................................................................................................................................................................................................................................................................................................................................2623.5070700000000
................................................................................................................TTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGA.........................................................................................................................................................................2733.331001000000000
............AGTTCTGAAGCCAAATTGAT-------GG..............................................................................................................................................................................................................................................................................................................................................2223.0060600000000
...............TCTGAAGCCAAATTGAT-------GGTTAGG.........................................................................................................................................................................................................................................................................................................................................2423.0060600000000
..............................................................................................................................................................................................................TGAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------..........................................2232.6780200001500
..............TTCTGAAGCCAAATTGAT-------GGTT............................................................................................................................................................................................................................................................................................................................................2232.6780800000000
..............................................................................................................................................................................................................TGAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAA.......................................2532.3370200001400
........................................................................................................................TCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGG....................................................................................................................................................................2432.3370000000700
................................................................................................................TTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------T..............................................................................................................................................................................2232.3370700000000
..................................................................................................................TCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGA.........................................................................................................................................................................2531.6750500000000
..............................................................................................................................................................................................................TGAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GA........................................2431.6750100001030
..................................................................................................................TCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGA............................................................................................................................................................................2231.6750500000000
......................................................................................................................................................................................................................TCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------C.............................1921.5030000000300
..........TGAGTTCTGAAGCCAAATTGAT-------................................................................................................................................................................................................................................................................................................................................................2221.5030300000000
..............................................................................................................................................................................................................TGAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------..............................2621.5030300000000
............AGTTCTGAAGCCAAATTGAT-------GGT.............................................................................................................................................................................................................................................................................................................................................2321.5030300000000
..................................................................................................................TCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGG..........................................................................................................................................................................2431.3340400000000
..................................................................................................................TCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TG.............................................................................................................................................................................2131.3340400000000
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------...............................................................................................................................................................................2031.3340300001000
.....................................................................................................................TCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGG....................................................................................................................................................................2731.3340300000100
.........................................................................................................................CAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGG....................................................................................................................................................................2331.3340000000400
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------T..............................................................................................................................................................................2131.0030201000000
....................................................................................................................................................................................................................GTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CCTG--------------------------2421.0020200000000
.......................................................................................................................TTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGGC...................................................................................................................................................................2631.0030100000200
...................................................................................................................................................................................................................CGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CC............................2321.0020000000200
.....................................................................................................................................................................................................................TTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CC............................2121.0020000000200
.......................................................................................................................TTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGG....................................................................................................................................................................2531.0030200000100
......................................................................................................................................................................................................................TCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CCT...........................2121.0020000000200
...............................................................................................................................................................................................................GAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------..........................................2130.6720000000200
.....................................................................................................................TCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGA.........................................................................................................................................................................2230.6720200000000
..............................................................................................................................................................................................................TGAGGCGTTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------G.........................................2330.6720200000000
........................................................................................................................TCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAG.....................................................................................................................................................................2330.6720000000200
..................................................................................................................TCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAG...........................................................................................................................................................................2330.6720200000000
TGA---GTGCTGAGTTCTGAAGCCAAAT...........................................................................................................................................................................................................................................................................................................................................................2520.5010100000000
................CTGAAGCCAAATTGAT-------GGTTAGG.........................................................................................................................................................................................................................................................................................................................................2320.5010100000000
............................TGAT-------GGTTAGGAATAGC--------------------------------------CATGGC.......................................................................................................................................................................................................................................................................................2320.5010100000000
...........GAGTTCTGAAGCCAAATTGAT-------GGTTAG..........................................................................................................................................................................................................................................................................................................................................2720.5010100000000
.......................................................................................................................................................................................................................CGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CCT...........................2020.5010100000000
................................................TAGC--------------------------------------CATGGCGAAG-----------CTTTCTTCT...............................................................................................................................................................................................................................................................2320.5010100000000
.........CTGAGTTCTGAAGCCAAATTGAT-------G...............................................................................................................................................................................................................................................................................................................................................2420.5010100000000
.....................GCCAAATTGAT-------GGTTAGGAATAGC--------------------------------------C............................................................................................................................................................................................................................................................................................2520.5010100000000
.........................................TTAGGAATAGC--------------------------------------CATGGCGA.....................................................................................................................................................................................................................................................................................1920.5010100000000
.....................GCCAAATTGAT-------GGTTAGGAAT......................................................................................................................................................................................................................................................................................................................................2120.5010010000000
...............TCTGAAGCCAAATTGAT-------GGTTAGA.........................................................................................................................................................................................................................................................................................................................................2420.5010100000000
.....................................................................................................................................................................................................................TTCGAGGATTTTGGA---------------------------------------------------------------------------------------------------------GAAA--------CCTG--------------------------2320.5010100000000
.......TGCTGAGTTCTGAAGCCAAATTG.........................................................................................................................................................................................................................................................................................................................................................2320.5010100000000
....................AGCCAAATTGAT-------GGTTAGGA........................................................................................................................................................................................................................................................................................................................................2020.5010100000000
.................TGAAGCCAAATTGAT-------GGTTAGG.........................................................................................................................................................................................................................................................................................................................................2220.5010100000000
............AGTTCTGAAGCCAAATTGAT-------GGTT............................................................................................................................................................................................................................................................................................................................................2420.5010100000000
..........TGAGTTCTGAAGCCAAATTGA........................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
..............TTCTGAAGCCAAATTGAT-------GGTTAG..........................................................................................................................................................................................................................................................................................................................................2420.5010100000000
.................TGAAGCCAAATTGAT-------GGTTAGGAA.......................................................................................................................................................................................................................................................................................................................................2420.5010010000000
............AGTTCTGAAGCCAAATTG.........................................................................................................................................................................................................................................................................................................................................................1820.5010100000000
.GA---GTGCTGAGTTCTGAAGCC...............................................................................................................................................................................................................................................................................................................................................................2020.5010010000000
.GA---GTGCTGAGTTCTGAAGC................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
...........GAGTTCTGAAGCCAAATTGAT-------GGTTA...........................................................................................................................................................................................................................................................................................................................................2620.5010100000000
..........TGAGTTCTGAAGCCAAAAA..........................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
..........................................TAGGAATAGC--------------------------------------CATGGCGAAG-----------CTTTC...................................................................................................................................................................................................................................................................2520.5010000100000
...............................T-------GGTTAGGAATAGC--------------------------------------CATGGCGAAG-----------CT......................................................................................................................................................................................................................................................................2620.5010100000000
.........................................................................................................................................CT-------------------------------------------------------------TGAGGATGAGGCGTTCGA.............................................................................................................................................................2030.3310100000000
........................................................................................................................................GCT-------------------------------------------------------------TGAGGATGAGGCGTTCGAGG...........................................................................................................................................................2330.3310100000000
........................................................................................................................TCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGA....................................................................................................................................................................2430.3310000000100
.........................................................................................................................................................................................................GAGGATGAGGCGTTCGAGGATTTTGG....................................................................................................................................................2630.3310100000000
.......................................................................................................................TTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGA......................................................................................................................................................................2330.3310100000000
..........................................................................................................................................T-------------------------------------------------------------TGAGGATGAGGCGTTCGAGG...........................................................................................................................................................2130.3310000001000
..............................................................................................................................................................................................................TGAGGCGTTCGAGGATTTTG.....................................................................................................................................................2030.3310100000000
..................................................................................................................TCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------T..............................................................................................................................................................................2030.3310100000000
..............................................................................................................................................................................................................TGAGGCGTTCGAGGATTTTGG....................................................................................................................................................2130.3310100000000
.............................................................................................................................GA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGGC...................................................................................................................................................................2030.3310001000000
...............TCTGAAGCCAAATTGAT-------GG..............................................................................................................................................................................................................................................................................................................................................1930.3310100000000
..........................................................................................................................................................................................................AGGATGAGGCGTTCGAGGA..........................................................................................................................................................1930.3310100000000
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGT.........................................................................................................................................................................2630.3310100000000
................................................................................................................TTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGA..........................................................................................................................................................................2630.3310100000000
...................................................................................................................CTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGA.........................................................................................................................................................................2430.3310100000000
.................TGAAGCCAAATTGAT-------GGTT............................................................................................................................................................................................................................................................................................................................................1930.3310100000000
.........................................................................................................................CAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGA......................................................................................................................................................................2130.3310100000000
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GC.............................................................................................................................................................................................................................................1930.3310100000000
......................................................................................................................CTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAG.....................................................................................................................................................................2530.3310100000000
.......................................................................................................................TTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGG..........................................................................................................................................................................1930.3310100000000
.....................................................................................................................TCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATG.......................................................................................................................................................................2430.3310100000000
.....................................................................................................................TCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAG...........................................................................................................................................................................2030.3310000000100
........................................................................................................................TCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGA..........................................................................................................................................................................1840.2510100000000
droPer2
TGA---GTGCTGACTTCTAAAGCCAAATTGAT-------GGTTTGGAATAGC--------------------------------------CATGGCAAAG-----------CTTTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGGCGTTCAAAGATTTTGGA---------------------------------------------------------------------------------------------------------GA-------------------------------AGCCTG--ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................TTCTTCTTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGA.........................................................................................................................................................................26200.204040000
...............................................................................................................................................................................................................GAGGCGTTCAAAGATTTTGGA---------------------------------------------------------------------------------------------------------GA-------------------------------.........2380.131000001
......................................................................................................................................................................................................................TCAAAGATTTTGGA---------------------------------------------------------------------------------------------------------GA-------------------------------AGCCTG--.2280.131000001
..............................................................................................................................................................................................................TGAGGCGTTCAAAGATTTTGGA---------------------------------------------------------------------------------------------------------GA-------------------------------AGC......2780.131000001
............................................................................................................................................................................................................GATGAGGCGTTCAAAGATTTTGGA---------------------------------------------------------------------------------------------------------GT-------------------------------.........2680.131000001
..........................................................................................................................AAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGA......................................................................................................................................................................20200.102000002
........................................................................................................................................................................................................TGAGGATGAGGCGTTCAAAGA..........................................................................................................................................................21100.101000001
.........................................................................................................................CAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGATGAGA....................................................................................................................................................................23200.051010000
.........................AATTGAT-------GGTTTGGAATAGC--------------------------------------CT...........................................................................................................................................................................................................................................................................................22200.051000001
............................................................................................TGGCAAAG-----------CTTTCTTCTTCAAAGA-GT.....................................................................................................................................................................................................................................................26200.051010000
............................TGAT-------GGTTTGGAATAGC--------------------------------------CATGGCAAA....................................................................................................................................................................................................................................................................................26200.051010000
.......................................................................................................................TTCAAAGA-GTC-----GCT-------------------------------------------------------------TGAGGAT........................................................................................................................................................................21200.051010000
............................................................................................TGGCAAAG-----------CTTTCTTCTTCAAAGA-.......................................................................................................................................................................................................................................................24200.051010000
droAna3
A------TGTTGAAGTCGAAAGCCGAACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTCTCGTCAGAAAGTA-GTC-----TTT-------------------------------------------------------------TCAGGATCAGTCTTTCCACGATTTTTCCCAGAGATGGTAGTAGACTAATGGGCCTGTATGAGTCTACGTCAGTTAGCGACTTTCCAGGTTTT---GGGATCATGTGTATGTCTAAAAGTATCTGCACTTCGGTGATT--------GCTGGGTGCAGCTATCTCAGCAGCCTGGTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................TCAGTCTTTCCACGATTTTTCCCAGAGA.............................................................................................................................................28111.0011470000
.........................AACTGGA-------ATTCCGGAATCGC--------------------------------------ACGG.........................................................................................................................................................................................................................................................................................2419.009720000
...........................................................................................................................................................................................................................................................................................................TCATGTGTATGTCTAAAAGTATCTGC..................................................2618.008053000
..............................................................................................................................................................................................................TCAGTCTTTCCACGATTTTTCCCAGA...............................................................................................................................................2617.007430000
.........................AACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGG........................................................................................................................................................................................................................................................................................2516.006420000
..............................................................................................................................................................................................................TCAGTCTTTCCACGATTTTTCCCAGAG..............................................................................................................................................2715.005320000
........................GAACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGG........................................................................................................................................................................................................................................................................................2615.005500000
........................................TTCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTC.....................................................................................................................................................................................................................................................................2513.003030000
........................GAACTGGA-------ATTCCGGAATCGC--------------------------------------ACGG.........................................................................................................................................................................................................................................................................................2513.003210000
...........................CTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGTGA.....................................................................................................................................................................................................................................................................................2612.002200000
.........................................TCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTC.....................................................................................................................................................................................................................................................................2412.002110000
..................................................................................................................................................................................................................................................................................................................TATGTCTAAAAGTATCTGCACTTCGGT..........................................2712.002200000
........................................................................................................................................................................................................................................GATGGTAGTAGACTAATGGGCCTGT......................................................................................................................2522.004103000
...............................................................................................................................................................................................................CAGTCTTTCCACGATTTTTCCCAGA...............................................................................................................................................2512.002200000
...............................................................................................................................................................................................................CAGTCTTTCCACGATTTTTCCCAGAGA.............................................................................................................................................2712.002020000
...............................................................................................................................................................................................................CAGTCTTTCCACGATTTTTCCCAGAG..............................................................................................................................................2612.002110000
...........................................................................................................................................................................................................................................................................................................TCATGTGTATGTCTAAAAGTATCTG...................................................2512.002100100
............AAGTCGAAAGCCGAACTGGA-------ATTCCG..........................................................................................................................................................................................................................................................................................................................................2612.002200000
.............................GGA-------ATTCCGGAATCGC--------------------------------------ACGGGTGA.....................................................................................................................................................................................................................................................................................2412.002200000
...........................................................................................................................................................................................................................................................................................................TCATGTGTATGTCTAAAAGTATCTGCAC................................................2812.002110000
.............................................................................................................................................................................................................................................TAGTAGACTAATGGGCCTGTATGAGTC...............................................................................................................2721.503111000
..........................................................................................................................................................................................................................................TGGTAGTAGACTAATGGGCCTGTA.....................................................................................................................2421.503210000
................................................................................................................................................................................................................................TTCCCAGAGATGGTAGTAGACTAATGG............................................................................................................................2721.503210000
.......................................................................................................................................................................................................................................................................................................................................TTCGGTGATT--------GCTGGGTGCAGCTATC..............2651.407340000
........................................TTCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTCT....................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................TCATGTGTATGTCTAAAAGTATCTGCA.................................................2711.001010000
...................................................................................................................................................................................................................CTTTCCACGATTTTTCCCAGA...............................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................................................................TCTGCACTTCGGTGATT--------GCTGGGTG......................2511.001001000
.............................................................................................................................................................................................................................................................................................AGGTTTT---GGGATCATGTGTATGTC...............................................................2411.001001000
................................................................................................................................................................................................................................................TAGACTAATGGGCCTGTATGAGTCTAC............................................................................................................2711.001010000
...........................................................................................................................................................................................................................................................................................................TCATGTGTATGTCTAAAAGTATCTGCACT...............................................2911.001100000
.........................................................................................................................AAAGTA-GTC-----TTT-------------------------------------------------------------TCAGGATCAGTCT..................................................................................................................................................................2511.001010000
............................................................................................................................................................................................................................................................................................................CATGTGTATGTCTAAAAGTATCTGC..................................................2511.001100000
...............................................................................................TGACA-----------TTCTCGTCAGAAAGTA-GTC-----TTT-------------------------------------------------------------...............................................................................................................................................................................2711.001001000
............................................................................................................................................................................................................................................................................................................CATGTGTATGTCTAAAAGTATCTGCAC................................................2711.001100000
................................................................................................................TCTCGTCAGAAAGTA-GTC-----TTT-------------------------------------------------------------TCAGGA.........................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................TTTTTCCCAGAGATGGTAGTAGACT.................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................TTCCACGATTTTTCCCAGAGA.............................................................................................................................................2111.001010000
..............................GA-------ATTCCGGAATCGC--------------------------------------ACGGGTGACA-----------T.......................................................................................................................................................................................................................................................................2611.001100000
..........................ACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGT.......................................................................................................................................................................................................................................................................................2511.001010000
.....................GCCGAACTGGA-------ATTCCGGAATCGC--------------------------------------ACGG.........................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................................................................................................................................................................................................TATCTGCACTTCGGTGATT--------GCTGGGTG......................2711.001010000
..............................................................................................................................................................................................................TCAGTCTTTCCACGATTTTTCCCAG................................................................................................................................................2511.001100000
..........................................................................................................................................T-------------------------------------------------------------TCAGGATCAGTCTTTCCACGA..........................................................................................................................................................2211.001100000
.............................................................................................................................TA-GTC-----TTT-------------------------------------------------------------TCAGGATCAGTCTTTCCAC............................................................................................................................................................2711.001010000
................................................................................................................................................................................................................................................................................................TTTT---GGGATCATGTGTATGTC...............................................................2111.001001000
.............................GGA-------ATTCCGGAATCGC--------------------------------------ACGGGTGAC....................................................................................................................................................................................................................................................................................2511.001100000
........................................TTCCGGAATCGC--------------------------------------ACGGGTGACA-----------TT......................................................................................................................................................................................................................................................................2411.001010000
.........................AACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGTGA.....................................................................................................................................................................................................................................................................................2811.001100000
..........TGAAGTCGAAAGCCGAACTGGA-------ATT.............................................................................................................................................................................................................................................................................................................................................2511.001010000
................................................TCGC--------------------------------------ACGGGTGACA-----------TTCTCGTCAGAAA...........................................................................................................................................................................................................................................................2711.001010000
............................TGGA-------ATTCCGGAATCGC--------------------------------------ACGGGTT......................................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................................................................................................................................................................TATCTGCACTTCGGTGATT--------GCTGGGT.......................2611.001010000
........................................................................................................................GAAAGTA-GTC-----TTT-------------------------------------------------------------TCAGGATCAGTC...................................................................................................................................................................2511.001010000
.........................AACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGT.......................................................................................................................................................................................................................................................................................2611.001100000
........................GAACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGA.......................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................TCTCGTCAGAAAGTA-GTC-----TTT-------------------------------------------------------------TCAGG..........................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................................TCTTTCCACGATTTTTCCCAGAGA.............................................................................................................................................2411.001010000
.............................................GAATCGC--------------------------------------ACGGGTGACA-----------TTCTCGTCAGA.............................................................................................................................................................................................................................................................2811.001100000
................................................................................................................................................................................................................................................TAGACTAATGGGCCTGTATGAGTCTACG...........................................................................................................2811.001100000
..............................................................................................................................................................................................................................................AGTAGACTAATGGGCCTGTATGAGTCTA.............................................................................................................2811.001100000
................................................................................................................................................................................................................AGTCTTTCCACGATTTTTCCCAGA...............................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................GATTTTTCCCAGAGATGGTAGTAGAC..................................................................................................................................2611.001010000
........................................................................................................................................................................................................................................GATGGTAGTAGACTAATGGGCCTGTA.....................................................................................................................2621.002110000
............................TGGA-------ATTCCGGAATCGC--------------------------------------ACGGGTG......................................................................................................................................................................................................................................................................................2411.001100000
........................................................................................................................................TTT-------------------------------------------------------------TCAGGATCAGTCTTTCCACGATT........................................................................................................................................................2611.001100000
.........................AACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGGTG......................................................................................................................................................................................................................................................................................2711.001100000
..........................ACTGGA-------ATTCCGGAATCGC--------------------------------------ACGGG........................................................................................................................................................................................................................................................................................2411.001100000
................................................................................................................................................................................................................................................................................................................................TCTGCACTTCGGTGATT--------GCTGGG........................2311.001001000
.........................................TCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTCTC...................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................TCATGTGTATGTCTAAAAGTATC.....................................................2311.001010000
........................................................................................................................GAAAGTA-GTC-----TTT-------------------------------------------------------------TCAGGATCAGTCT..................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................................TCTTTCCACGATTTTTCCCAGAGATGG..........................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................AGACTAATGGGCCTGTATGAGTCTACG...........................................................................................................2711.001100000
...................................................................................................A-----------TTCTCGTCAGAAAGTA-GTC-----TTT-------------------------------------------------------------TC.............................................................................................................................................................................2511.001010000
........................................TTCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTCTC...................................................................................................................................................................................................................................................................2711.001100000
.........................................TCCGGAATCGC--------------------------------------ACGGGTGACA-----------TTCTCG..................................................................................................................................................................................................................................................................2711.001010000
........................................................................................................................................................................................................................................GATGGTAGTAGACTAATGGGCCTG.......................................................................................................................2430.672011000
......................................................................................................................................................................................................................................GAGATGGTAGTAGACTAATGGGCCT........................................................................................................................2530.672020000
..........................................................................................................................................................................................................................................TGGTAGTAGACTAATGGGCCTG.......................................................................................................................2230.672200000
........................................................................................................................................................................................................................................GATGGTAGTAGACTAATGGGCCT........................................................................................................................2330.672020000
.............................................................................................................................................................................................................................................TAGTAGACTAATGGGCCTGTATGAC.................................................................................................................2520.501010000
..............................................................................................................................................................................................................................TTTTCCCAGAGATGGTAGTAGACTAA...............................................................................................................................2620.501100000
..............................................................................................................................................................................................................................TTTTCCCAGAGATGGTAGTAGACT.................................................................................................................................2420.501100000
................................................................................................................................................................................................................................................TAGACTAATGGGCCTGTATGAGT................................................................................................................2320.501100000
................................................................................................................................................................................................................................................TAGACTAATGGGCCTGTATGAGTC...............................................................................................................2420.501010000
..............................................................................................................................................................................................................................TTTTCCCAGAGATGGTAGTAGAC..................................................................................................................................2320.501010000
..........................................................................................................................................................................................................................................TGGTAGTAGACTAATGGGCCTGTATGA..................................................................................................................2720.501100000
.................................................................................................................................................................................................................................TCCCAGAGATGGTAGTAGACTAATGGG...........................................................................................................................2720.501100000
.............................................................................................................................................................................................................................................TAGTAGACTAATGGGCCTGTATGAGT................................................................................................................2620.501100000
...............................................................................................................................................................................................................................................GTAGACTAATGGGCCTGTATGAGC................................................................................................................2420.501010000
..........................................................................................................................................................................................................................................TGGTAGTAGACTAATGGGCCTGTAC....................................................................................................................2520.501010000
.................................................................................................................................................................................................................................TCCCAGAGATGGTAGTAGACTAATGG............................................................................................................................2620.501001000
.......................................................................................................................................................................................................................................................................................................................................TTCGGTGATT--------GCTGGGTGCAGCTA................2470.433201000
.......................................................................................................................................................................................................................................................................................................................................TTCGGTGATT--------GCTGGGTGCAGC..................2270.433030000
.................GAAAGCCGAACTGGA-------ATTCCGGAAT......................................................................................................................................................................................................................................................................................................................................2550.402110000
......................................................................................................................................................................................................................................GAGATGGTAGTAGACTAATGGGCC.........................................................................................................................2430.331010000
......................................................................................................................................................................................................................................GAGATGGTAGTAGACTAATGGGCCTG.......................................................................................................................2630.331001000
....................................................................................................................................................................................................................................CAGAGATGGTAGTAGACTAATGGGC..........................................................................................................................2530.331001000
.........................................................................................................................................................................................................................................ATGGTAGTAGACTAATGGGCCTG.......................................................................................................................2330.331100000
.....................................................................................................................................................................................................................................................................................................................................ACTTCGGTGATT--------GCTGGGT.......................1930.331100000
......................................................................................................................................................................................................................................................................................................................................CTTCGGTGATT--------GCTGGGTGCAGC..................2330.331100000
......................................................................................................................................................................................................................................................................................................................................CTTCGGTGATT--------GCTGGGTGCAGCT.................2430.331010000
........................................................................................................................................................................................................................................GATGGTAGTAGACTAATGGGA..........................................................................................................................2130.331001000
.....................................................................................................................................................................................................................................................................................................................................ACTTCGGTGATT--------GCTGGGTGCAGC..................2430.331010000
..........................................................................................................................................................................................................................................TGGTAGTAGACTAATGGGC..........................................................................................................................1930.331001000
....................................................................................................................................................................................................................................CAGAGATGGTAGTAGACTAATGGGG..........................................................................................................................2530.331010000
..............................................................................................................................................................................................................................................................TGTATGAGTCTACGTCAGTTAGCGAC...............................................................................................26100.303030000
..............................................................................................................................................................................................................................................................TGTATGAGTCTACGTCAGTTAGCGACT..............................................................................................27100.303201000
........................................................................................................................................................................................................................................................................TACGTCAGTTAGCGACTTTCCAGGTTT....................................................................................27150.274130000
..........................ACTGGA-------ATTCCGGAATCGC--------------------------------------AC...........................................................................................................................................................................................................................................................................................2140.251010000
.........................AACTGGA-------ATTCCGGAATCGC--------------------------------------A............................................................................................................................................................................................................................................................................................2140.251010000
............................................................................................................................................................................................................................................................................TCAGTTAGCGACTTTCCAGGTTTT---GG..............................................................................26180.224400000
..................AAAGCCGAACTGGA-------ATTCCGGAATC.....................................................................................................................................................................................................................................................................................................................................2550.201100000
......................................................................................................................................................................................................................................................................TCTACGTCAGTTAGCGACTTTCCAGG.......................................................................................26150.203300000
........................................................................................................................................................................................................................................................TGGGCCTGTATGAGTCTACGTCAGTT.....................................................................................................26100.202200000
...................AAGCCGAACTGGA-------ATTCCGGAATC.....................................................................................................................................................................................................................................................................................................................................2450.201001000
.................GAAAGCCGAACTGGA-------ATTCCGGAATC.....................................................................................................................................................................................................................................................................................................................................2650.201010000
.................................................................................................................................................................................................................................................................................TAGCGACTTTCCAGGTTTT---GGGATC..........................................................................25190.163030000
.......................................................................................................................................................................................................................................................................................................................................TTCGGTGATT--------GCTGGGTGCAGAC.................2370.141010000
.......................................................................................................................................................................................................................................................................................................................................TTCGGTGATT--------GCTGGGTGCAGCT.................2370.141001000
........................................................................................................................................................................................................................................................................................................................................TCGGTGATT--------GCTGGGTGCA....................1970.141010000
...............................................................................................................................................................................................................................................................................................................................................................TGCAGCTATCTCAGCAGCCTGGTT24140.142200000
.......................................................................................................................................................................................................................................................................................................................................TTCGGTGATT--------GCTGGGTGCAGCTAT...............2570.141001000
.......................................................................................................................................................................................................................................................................................................................................TTCGGTGATT--------GCTGGGTGCAC...................2170.141010000
........................................................................................................................................................................................................................................................................TACGTCAGTTAGCGACTTTCCAGGTT.....................................................................................26150.132110000
...............................................................................................................................................................................................................................................................................GTTAGCGACTTTCCAGGTTTT---GG..............................................................................23190.112101000
..........................................................................................................................................................................................................................................................GGCCTGTATGAGTCTACGTCAGTTAGC..................................................................................................27100.101010000
..............................................................................................................................................................................................................................................................TGTATGAGTCTACGTCAGTTAGC..................................................................................................23100.101000010
.......................................................................................................................................................................................................................................................ATGGGCCTGTATGAGTCTACGTCAGTT.....................................................................................................27100.101100000
...........................................................................................................................................................................................................................................................GCCTGTATGAGTCTACGTCAGTTAGCG.................................................................................................27100.101100000
..............................................................................................................................................................................................................................................................TGTATGAGTCTACGTCAGTTAGCGA................................................................................................25100.101100000
.....................................................................................................................................................................................................................................................TAATGGGCCTGTATGAGTCTACGTCA........................................................................................................26110.091001000
........................................................................................................................................................................................................................................................TGGGCCTGTATGAGTCTACGTCA........................................................................................................23110.091100000
.......................................................................................................................................................................................................................................................ATGGGCCTGTATGAGTCTACGTCAGT......................................................................................................26110.091001000
.....................................................................................................................................................................................................................................................TAATGGGCCTGTATGAGTCTACGTCAGT......................................................................................................28110.091100000
........................................................................................................................................................................................................................................................TGGGCCTGTATGAGTCTACGTCAG.......................................................................................................24110.091100000
................................................................................................................................................................................................................................................................TATGAGTCTACGTCAGTTAGCGAC...............................................................................................24120.081010000
..................................................................................................................................................................................................................................................................TGAGTCTACGTCAGTTAGCGACTTTCC..........................................................................................27130.081100000
........................................................................................................................................................................................................................................................................TACGTCAGTTAGCGACTTTCCAGGT......................................................................................25150.071010000
......................................................................................................................................................................................................................................................................TCTACGTCAGTTAGCGACTTTCCAGGTTT....................................................................................29150.071100000
........................................................................................................................................................................................................................................................................................TTTCCAGGTTTT---GGGATCATGTGTAT..................................................................26180.061100000
............................................................................................................................................................................................................................................................................TCAGTTAGCGACTTTCCAGGTTTT---GGG.............................................................................27180.061010000
............................................................................................................................................................................................................................................................................TCAGTTAGCGACTTTCCAGGTTTT---GGGT............................................................................28180.061010000
............................................................................................................................................................................................................................................................................TCAGTTAGCGACTTTCCAGGTTTT---................................................................................24190.051100000
........................................................................................................................................................................................................................................................................................TTTCCAGGTTTT---GGGATCATGTG.....................................................................23190.051100000
..................................................................................................................................................................................................................................................................................AGCGACTTTCCAGGTTTT---GGGAT...........................................................................23200.051000010
droBip1
TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT----------------------------TAAGGAGCGCACAAATTCTAGGTGGTAGCTGGGGATGTCTAGAAGTTTCTGTATGTTGATGATT--------GCTGGGTGCAGCTATCTCAGCAGCATAGTTSizeHit CountTotal NormTotal
No Reads
droKik1
TCTCCTGTTCTAG---------------------------------CATATT--------------------------------------CACTACGAAC-----------T--------------------CTTCGC-------------------------------------------------------------------------------------------------TT---AAGTC----------------------------TAAGCAGTGCTAAAATTCTGGGAGGAAGTTGGGGAGGTCTAGGGCCCACTACTTCATGTCGATT--------TCTGGGGGCAGCAAGCTGAGCAGCCTCAGASizeHit CountTotal NormTotal
No Reads
droFic1
TTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT----------------------------TGAGAAGTGCCGCGATTCTGGGAGGTAGTTTGAGATGTCTAGAGGTCTCTGTATTTTGGCGATC--------TCTGCATGCAGCTGTATCAGCAGCCTGGTTSizeHit CountTotal NormTotal
No Reads
droEle1
AGTGCCGTGCTGTAGGCGGAAACCGAACTGGA-------ATTTCGGGATCGC--------------------------------------TCTGGTGACA-----------TTTTCGAAAGTTAGTA-GCC-----TGT-------------------------------------------------------------TTAGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC----------------------------GGAGGAGTTCGATGATTGCAGGAGGAAGCTGAAGCTGTCGTTGTTCATTCGCATGCTGCCGGTT--------TCTAGGAGCAGCTCTTGTTGCAGCTTATGTSizeHit CountTotal NormTotal
No Reads
droBia1
TTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAT----------------------------TGAGAAGTGTCACAATTCTGGGAGGAAGCTGGAGATGTCTAAGGGTATCCGTATTTTGGCGATT--------TCTGGGTGCAGCTATCTCAGTAGCCGGTATSizeHit CountTotal NormTotal
No Reads
droTak1
AGTGCCGTGCTGTAGGCGGAAACCGAACTGGA-------ATTTCGGGATCGC--------------------------------------TCTGGTGACA-----------TTTTCGAAAGTTAGTA-GCC-----TGT-------------------------------------------------------------TTAGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGTTCCATGTTGAAGACGAAAGCCAAAGCGAA-------CACTTCAGCTTTTTCTAGCTAGTACAGCACCAACCGCCTGAAGGGTTTCTAATGGCTGATTATGGGCTGAGCCTTATAC------CG------TTTCGT-------------------------------------------------------------------------------------------------TA---TAGAT----------------------------TGAGAAGTGCCCAATTTCTGGGTTGAAGCTGGAGATGTTAAGGGGTCTCTGTACTTTGAAGATT--------TCTGGGTGCAGCTATCTCAGCAGCTTGGTTSizeHit CountTotal NormTotal
No Reads
dm3
GGA------------------------------------ATTTGGGGATCGC--------------------------------------TTTGGTAATA-----------TTTTAGAAAGCGAGCA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATAATTTTTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------CGATTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................C--------------------------------------TTTGGTAATA-----------TTTTAGAAAGCGAG..........................................................................................................................................................................................................................................................25118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000050212020000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000
.............................................................................................................................CA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCA.............................................................................................................................................................26112.00120000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000030000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATAATT........................................................................................................................................................26110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000200000000000002000000000020100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------......2619.0090000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000020200000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................C--------------------------------------TTTGGTAATA-----------TTTTAGAAAGCGAGC.........................................................................................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................TTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------C.....2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000
.............................................................................................................................CA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCC..............................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000110000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................TCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------C.....2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002000000000000000000000000000000000000000000000000000000010100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTC...............................................................................................................................................................2414.0040000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..A------------------------------------ATTTGGGGATCGC--------------------------------------TTTGGTA......................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000
........................................................................................................................................................................................................................................GATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------CGAT..2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................C--------------------------------------TTTGGTAATA-----------TTTTAGAAAGCGAGCA-.......................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................C--------------------------------------TTTGGTAATA-----------TTTTAGAAAGCGA...........................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................TAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------CGAT..2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------CGA...2812.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TTTTTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGG......................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGC....................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................A-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTC...............................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------CGA...2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TAAGGATCAGCTTCTCCATAATTT.......................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................TCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATAA..........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TCCTAGGGATGGGAGTAGA---------------------------------------------------------..........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------CGATT.2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATTTGGGGATCGC--------------------------------------TTTGGTA......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
................................................TCGC--------------------------------------TTTGGTAATA-----------TTTTAG..................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CTCCATAATTTTTCCTAGGGATGGGAG.......................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGT.....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ATAATTTTTCCTAGGGATGGGAG.......................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................GATCAGCTTCTCCATAATTTT......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATA...........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGG......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGG......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................................................................CCTAGGGATGGGAGTAGA---------------------------------------------------------CTGGTG--------------------------------------------------------------......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................CA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATA...........................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GCA-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTC...............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATA...........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................TTTAGAAAGCGAGCA-GCC-----TGT-------------------------------------------------------------TAAGGA.........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................TGT-------------------------------------------------------------TAAGGATCAGCTTCTCC..............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TAGGGATGGGAGTAGA---------------------------------------------------------CTGGT.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATAATTTT......................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................CC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATAATT........................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TTTTCCTAGGGATGGGAGTAGA---------------------------------------------------------CTGG......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATTTGGGGATCGC--------------------------------------TTTGGTAATA-----------T.......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATAATTT.......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATTTGGGGATCGC--------------------------------------TTTGGTAA.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................TAAGGATCAGCTTCTCCATAATTTT......................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TCGC--------------------------------------TTTGGTAATA-----------TTTTAGAAAGC.............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................C--------------------------------------TTTGGTAATA-----------TTTTAGAAAGCGAGA.........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CATAATTTTTCCTAGGGATGG..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................A-GCC-----TGT-------------------------------------------------------------TAAGGATCAGCTTCTCCATA...........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATTTGGGGATCGC--------------------------------------TTTGGTAAC....................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
TTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC----------------------------GAAGGAGATCAACTATTGCAGAAGGTAGGAGCGACTGGACAAAGGCTTGTGTATTGCGTGGAGC--------ACTCGGAGTAGCATGTGTTGCTGCTTCTTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................TGCGTGGAGC--------ACTCGGAGTAGCATG...............2512.00200000000200000000
................................................................................................................................................................................................................................................................................................TTGCAGAAGGTAGGAGCGACTGGACAA............................................................2712.00200000000000020000
..............................................................................................................................................................................................................................................................................................TATTGCAGAAGGTAGGAGCGACTGGA...............................................................2612.00200000000000020000
.TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC----------------------------GAAGGAGATCAACTATTGC...................................................................................2512.00200000000002000000
................................................................................................................................................................................................................................................................................................TTGCAGAAGGTAGGAGCGACTGGA...............................................................2412.00200000000001010000
..........................................................................................................................................................................................................................................................................................................TAGGAGCGACTGGACAAA...........................................................1812.00200000000200000000
................................................................................................................................................................................................................................................................................................................................TGTGTATTGCGTGGAGC--------ACTCGGAGT.....................2612.00200000000002000000
.......................................................................................................................................................................................................................................................................................................AGGTAGGAGCGACTGGACAAAGGC........................................................2412.00200000000001010000
..............................................................................................................................................................................................................................................................................................................................................AGC--------ACTCGGAGTAGCATGTGTTGCTGC......2711.00100000000001000000
..................................................................................................................................................................................................................................................................................................GCAGAAGGTAGGAGCGACTGGAT..............................................................2311.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................................TCGGAGTAGCATGTGTTGCTGCTTC...2511.00100000000001000000
...................................................................................................................................................................................................................................................................................................CAGAAGGTAGGAGCGACTGGAA..............................................................2211.00100000000000001000
..................................................................................................................................................................................................................................................................................................GCAGAAGGTAGGAGCGACTGGACA.............................................................2411.00100010000000000000
..................................................................................................................................................................................................................................................................................................GCAGAAGGTAGGAGCGACTGGACAA............................................................2511.00100000000000010000
..............................................................................................................................................................................................................................................................................................................AGCGACTGGACAAAGGCTTG.....................................................2011.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................GCGTGGAGC--------ACTCGGAGTAG...................2011.00100000000001000000
..................................................................................................................................................................................................................................................................................................GCAGAAGGTAGGAGCGACTGGA...............................................................2211.00100000000000010000
....................................................................................................................................................................................................................................................................................GGAGATCAACTATTGCAGAAGGTAGGAG.......................................................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................ATTGCGTGGAGC--------ACTC..........................1611.00100000000001000000
..................................................................................................................................................................................................................................................................................................GCAGAAGGTAGGAGCGACTGG................................................................2111.00100000000000010000
.................................................................................................................................................................................................................................................................................................TGCAGAAGGTAGGAGCGACTGGAC..............................................................2411.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................CGGAGTAGCATGTGTTGCTGC......2111.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................TGGAGC--------ACTCGGAGTAGCATG...............2111.00100000000000010000
..................................................................................................................................................................................................................................................................................................GCAGAAGGTAGGAGCGACTGGACAAAG..........................................................2711.00100000000000010000
TTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC----------------------------GAAGGAGATCAACTATTGC...................................................................................2611.00100000000001000000
...............................................................................................................................................................................................................................................................................................ATTGCAGAAGGTAGGAGCGACTGGACA.............................................................2711.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................GTGGAGC--------ACTCGGAGTAGCAT................2111.00100000000000001000
................................................................................................................................................................................................................................................................................................TTGCAGAAGGTAGGAGCGACTGTT...............................................................2420.50100000000000001000
..............................................................................................................................................................................................................................................................................................TATTGCAGAAGGTAGGAGCGTT...................................................................2230.33100000000000001000
.....................................................................................................................................................................................................................................................................................................GAAGGTAGGAGCGACTGGATT.............................................................2130.33100000000000001000
..............................................................................................................................................................................................................................................................................................TATTGCAGAAGGTAGGAGCGT....................................................................2130.33100000000000001000
droSec2
AGTACCGTGCTGCAACCGGAAGCCAAACTGAA-------ATTTGGGAATCGC--------------------------------------TTTGGTAACA-----------TCCTTGCAAGTGAGCATGAC-----CGA-------------------------------------------------------------ACAG-------------------------------GAAAGCAGA----------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................GGGAATCGC--------------------------------------TTTGGTAACA-----------TCCTT...................................................................................................................................................................................................................................................................24200.601212000
...........................................GGGAATCGC--------------------------------------TTTGGTAACA-----------TCCT....................................................................................................................................................................................................................................................................23200.3577000
..............................AA-------ATTTGGGAATCGC--------------------------------------TTTGGT.......................................................................................................................................................................................................................................................................................21200.2555000
...........................................GGGAATCGC--------------------------------------TTTGGTAACA-----------TCCTTGCA................................................................................................................................................................................................................................................................27200.2555000
...................................................................................................A-----------TCCTTGCAAGTGAGCATGAC-----CGA-------------------------------------------------------------ACA............................................................................................................................................................................2750.2010010
...............................................ATCGC--------------------------------------TTTGGTAACA-----------TCCTTG..................................................................................................................................................................................................................................................................21200.1533000
............................................GGAATCGC--------------------------------------TTTGGTAACA-----------TCCTTG..................................................................................................................................................................................................................................................................24200.1533000
..........................................TGGGAATCGC--------------------------------------TTTGGTAACA-----------TCCT....................................................................................................................................................................................................................................................................24200.1532010
..........................................................................................TTTGGTAACA-----------TCCTTGCAAGT.............................................................................................................................................................................................................................................................21200.1021100
..............................................AATCGC--------------------------------------TTTGGTAACA-----------TCCT....................................................................................................................................................................................................................................................................20200.0511000
..........TGCAACCGGAAGCCAAACTGAA-------ATT.............................................................................................................................................................................................................................................................................................................................................25200.0510010
........................................TTTGGGAATCGC--------------------------------------TTTGGTAACA-----------TC......................................................................................................................................................................................................................................................................24200.0510010
..........................................TGGGAATCGC--------------------------------------TTTGGTAACA-----------T.......................................................................................................................................................................................................................................................................21200.0511000
.........................................TTGGGAATCGC--------------------------------------TTTGGTAACA-----------TCCT....................................................................................................................................................................................................................................................................25200.0510010
........................................TTTGGGAATCGC--------------------------------------TTTGGTAACA-----------TCC.....................................................................................................................................................................................................................................................................25200.0510010
.........................AACTGAA-------ATTTGGGAATCGC--------------------------------------T............................................................................................................................................................................................................................................................................................21200.0511000
...........................................GGGAATCGC--------------------------------------TTTGGTAACA-----------TCC.....................................................................................................................................................................................................................................................................22200.0511000
...................................................C--------------------------------------TTTGGTAACA-----------TCCTTGCAAGT.............................................................................................................................................................................................................................................................22200.0511000
...................................................C--------------------------------------TTTGGTAACA-----------TCCTTGCAAG..............................................................................................................................................................................................................................................................21200.0511000
...............................................................................................................................TGAC-----CGA-------------------------------------------------------------ACAG-------------------------------GAAAGCAGA----------------------------------------------------------------------------------------------------------------------------------C21200.0510010
....CCGTGCTGCAACCGGAAGCCA..............................................................................................................................................................................................................................................................................................................................................................21200.0510001
...............................................................................................TAACA-----------TCCTTGCAAGTGAGCA........................................................................................................................................................................................................................................................21200.0511000
........................AAACTGAA-------ATTTGGGAATCGC--------------------------------------TTTGG........................................................................................................................................................................................................................................................................................26200.0511000
...ACCGTGCTGCAACCGGAAGCCAAAC...........................................................................................................................................................................................................................................................................................................................................................25200.0511000
droYak3
TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGC----------------------------GTAGGAGGTCAACTGTTACAGAAGTCAGGGGCGACTGGATAAAGGCTTGGGCATTGCGTGGAGT--------ACTCGGTGCCGCATGTGCTGCTGCTTCTTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................GAGT--------ACTCGGTGCCGCATGTG.............2114.00400000000004
.............................................................................................................................................................................................................................................................................................................................................GAGT--------ACTCGGTGCCGCATGTGCTG..........2411.00100100000000
................................................................................................................................................................................................................................................................................................................................................T--------ACTCGGTGCCGCATGTGCTGCTGC......2521.00202000000000
................................................................................................................................................................................................................................................................................................................................................T--------ACTCGGTGCCGCATGTGCTGCTGT......2520.50101000000000
....................................................................................................................................................................................................................................................................................................................................CATTGCGTGGAGT--------ACTCGGTG......................2160.17100000010000
droEre2
TGTGCCATGCTGGATCTT-------------------------TGGTTTTAA--------------------------------------TTTAGAGACAAGATACTGAGTTCTTTAAGAGTAAGATCAACCCTTCGT-------------------------------------------------------------------------------------------------TT---AAGCC----------------------------GAAGAAGATTAGCTATTGTGGAGGATACTTGAGGCTGATGGAAAGTTTGTACATTTTGTAGATTTATATTATATTGTATACAGCGCATGCTGCAGTTTGTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................TGAGGCTGATGGAAAGTTTGTACATTT..............................................2720.5010000100
........................................................................................................................................................................................................................................................................................................GATACTTGAGGCTGATGGAAA..........................................................2120.5010000010

Generated: 05/15/2015 at 03:06 PM