ID:

dvi_14328

 Coordinate:

scaffold_13042:1811044-1811194 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.4 -8.2 -8.2

Flybase annnotation

exon [dvir_GLEANR_16141:3]; CDS [Dvir\GJ15704-cds]; intron [Dvir\GJ15704-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCTCTCTTAAAAAACTTATCTCTCAGCTTACTCGACTTTTGTCGCGAACTTTCTTGATATATTCCAAGCCTTGAAGAACATGATTCCTTAATTCCCTCGAGCCCTGAAATTGCATCCATAAATGTCTTTAGTTTTGGTCTCTTGTTCGGCTTTGGTCTCGATTTCGTTTTGAATAAATCGTAAATATTTCTAATTCTCAGATAATAAACAAAGCGCTGTCGTGCGAAATGGCAAAAATGCTGAGAATGAC
**************************************************************..(((((.((.(((((.(((...............(((.....)))..............)))))))))).))))).........******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M047
female body
 SRR060685
9xArg_0-2h_embryos_total
 GSM1528803
follicle cells		 M061
embryo
 SRR060665
9_females_carcasses_total
 V047
embryo
 SRR060687
9_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 V053
head
 SRR1106730
embryo_16-30h
 SRR060666
160_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
.......................................................................................................................................................................................................................GCTCGCGTGCGTAATGGCA................. 19 3 16 12.69 203 193 0 0 0 0 0 0 0 0 0 0 0 0 7 0 1 1 1
....................................................................................................................................................................................................................................ATGGCAAAAATGCTGAGAAT... 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGCTGTCGTGCGAAATGGCAA................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................TTCCAAGCCTTGAAGAACATGATTCC................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CGCTGTCGTGCGAAATGGCAA................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................GTCTTTAGTTTTGGTCTCTTGTT........................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CGAAATGGCAAAAATGCTGAGAAT... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CAAAGCGCTGTCGTGCGAAA...................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................ATTGCATCCATAGGTGTCTTT......................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AAAGCGCTGTCGTGCGAAATG.................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................CTCTCAGCTTACTCGACTTTTGTCGC............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTCGGCTTTGGTCTCGATTTCGTT.................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GCCTCTTGTTCGGCTTTGGTC............................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................CTGCTTTGGTCTCGATTTCTTTTTGAAT............................................................................ 28 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................CGACTTTCGTCGCGAACT........................................................................................................................................................................................................ 18 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGCGCTGTCGTGCGAAATGGCA................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATAATAAACAAAGCGCTGTC.............................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................CAGCTTACTCGACTTTTGTCG.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GATAATAAACAAAGCGCTGTCGTGCGAA....................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATAAACAAAGCGCTGTCGTGC.......................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GTTCGGCTTTGGTCTCGAT........................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACAAAGCGCTGTCGTGCGAAAT..................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATAAACAAAGCGCTGT............................... 16 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................GCTCTCGTGCGTAATGGC.................. 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AATGATTCCTTAATACCGTC........................................................................................................................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCTCGCGTGCGTAATGGCAAA............... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............AACTCATCGCTCAGCTTAGT.......................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................GCTCGCGTGCGTAATGGCAA................ 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCCCGAACTTTCTTGCTAAA............................................................................................................................................................................................. 20 3 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCTCACGTGCGTAATGGCAA................ 20 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................CGAGCCCTGAAAATGGAT....................................................................................................................................... 18 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TGTCGGGAATTTTCTTGGT................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCGAGAGAATTTTTTGAATAGAGAGTCGAATGAGCTGAAAACAGCGCTTGAAAGAACTATATAAGGTTCGGAACTTCTTGTACTAAGGAATTAAGGGAGCTCGGGACTTTAACGTAGGTATTTACAGAAATCAAAACCAGAGAACAAGCCGAAACCAGAGCTAAAGCAAAACTTATTTAGCATTTATAAAGATTAAGAGTCTATTATTTGTTTCGCGACAGCACGCTTTACCGTTTTTACGACTCTTACTG
********************************************************************************************************..(((((.((.(((((.(((...............(((.....)))..............)))))))))).))))).........************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060663
160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060673
9_ovaries_total
 SRR1106721
embryo_10-12h
 V047
embryo
 GSM1528803
follicle cells
..................................................................................CTAAGGACTTAAGGGAGA....................................................................................................................................................... 18 2 4 4.25 17 14 0 0 0 0 0 2 1 0 0 0 0 0
...............................................................................GAACTAAGGACTTAAGGGAG........................................................................................................................................................ 20 2 1 3.00 3 0 2 1 0 0 0 0 0 0 0 0 0 0
.................................................................................ACTAAGGACTTAAGGGAGA....................................................................................................................................................... 19 2 2 2.00 4 3 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................ACTAAGGACTTAAGGGAG........................................................................................................................................................ 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................GGAACTAAGGACTTAAGGGAG........................................................................................................................................................ 21 3 2 1.50 3 1 0 0 1 0 1 0 0 0 0 0 0 0
.................................................................................ACTAAGGACTTAAGGGAGAC...................................................................................................................................................... 20 3 5 0.60 3 1 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................ACTAAGGGCTTAAGGGAG........................................................................................................................................................ 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................GGAAGAAGTATATAAGGTT....................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................AAGGTAGGTATTCACATAAATC....................................................................................................................... 22 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................GGAACTAAGGACTTAAGGGA......................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................CTACATAAGGTTCGG.................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................AGAGTCGAAAGAGCTGTA.................................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................AACTAAGGACTTAAGGGAGA....................................................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CGGAACTTGTGGTACAAAG.................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................AGAGCTAAAGTAATACTTTTT.......................................................................... 21 3 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TCAAGCAGAACTTATTTA........................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13042:1810994-1811244 - dvi_14328 AGCTCTCTTAAAAAACTTATCTCTCAGCTTACTCGACTTTTGTCGCGAACTTTCTTGATATATTCCAAGCCTTGAAGAACATGATTCCTTAATTCCCTCGAGCCCTGAAATTGCATCCATAAATGTCTTTAGTTTTGGTCTCTTGTTCGGCTTTGGTCTCGA-T-------------------------------------TTCGTTTTG--AATAAATCGTAAATA-TTTCTAATTCTCAGATAATAAACAAAGCGCTGTCGTGCGAAATGGCAAAAATGCTGAGA---ATGAC
droMoj3 scaffold_6359:1724080-1724174 - -------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGG-TTCCGGACC------------------------------------TA--AATAAAGCGTCAATACTTTTTAACTCTC-GCAGATAAACAAAAAGCTGTCGTGCGAAATGGCAAAAGTGCTGAGA---ATGAC
droGri2 scaffold_14853:3195998-3196131 - -------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTGGATTTATTGGTCTGGTTCGAAGAAAACCCCGCATTCGCTATAAATATAAATCGTAAATA-TTTTTAATTCTCAGATAATAAACAAAACGCTGTCGCGCAAAATGGCAAAAACGCTAAGA---CTGAT
droWil2 scf2_1100000004590:1073289-1073373 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--AATAAAACGTAAATAATTTTTAATTCTCAGATAATAAACAAAATGCTGTCGTGCAAAATGGCAAAAGCTCTGAAAATAATGAC
dp5 XL_group1a:1969235-1969313 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGTCGTCGTGCAAAATGGCAAGAGTTCCGAAA---ATGAC
droPer2 scaffold_28:413098-413176 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGTCGTCGTGCAAAATGGCAAGAGTTCCGAAA---ATGAC
droAna3 scaffold_13117:1211655-1211731 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAAAGTTCTGAAA---ATGAC
droBip1 scf7180000396425:905041-905117 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAAAGTTCTGAAA---ATGAC
droKik1 scf7180000299277:405022-405099 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droFic1 scf7180000454038:168153-168230 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droEle1 scf7180000491277:460937-461014 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droRho1 scf7180000779914:41046-41123 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droBia1 scf7180000299226:484476-484553 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droTak1 scf7180000414452:148708-148785 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droEug1 scf7180000409533:60014-60091 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
dm3 chrX:14967375-14967452 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droSim2 x:14131250-14131327 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droSec2 scaffold_32:414396-414473 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGAAGAATGGCAAGAGTTCTGAAA---ATGAC
droYak3 X:9159613-9159690 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC
droEre2 scaffold_4690:12045813-12045890 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGCTCTCTTAAAAAACTTATCTCTCAGCTTACTCGACTTTTGTCGCGAACTTTCTTGATATATTCCAAGCCTTGAAGAACATGATTCCTTAATTCCCTCGAGCCCTGAAATTGCATCCATAAATGTCTTTAGTTTTGGTCTCTTGTTCGGCTTTGGTCTCGA-T-------------------------------------TTCGTTTTG--AATAAATCGTAAATA-TTTCTAATTCTCAGATAATAAACAAAGCGCTGTCGTGCGAAATGGCAAAAATGCTGAGA---ATGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................ATGGCAAAAATGCTGAGA---AT...2012.002000000000000000000000000000000000000000000000000000000000000002
.............................................................................................................................................................................................................................................................AGCGCTGTCGTGCGAAATGGCAA...................2311.001000000000000000000000000000000000001000000000000000000000000000
..............................................................TTCCAAGCCTTGAAGAACATGATTCC...............................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CGCTGTCGTGCGAAATGGCAA...................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GTCTTTAGTTTTGGTCTCTTGTT....................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CGAAATGGCAAAAATGCTGAGA---AT...2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CAAAGCGCTGTCGTGCGAAA.........................2011.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAAGCGCTGTCGTGCGAAATG.......................2111.001000000000000000000000000000000001000000000000000000000000000000
....................CTCTCAGCTTACTCGACTTTTGTCGC.........................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TTCGGCTTTGGTCTCGA-T-------------------------------------TTCGTT........................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................AGCGCTGTCGTGCGAAATGGCA....................2211.001000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................ATAATAAACAAAGCGCTGTC.................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................CAGCTTACTCGACTTTTGTCG..........................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GATAATAAACAAAGCGCTGTCGTGCGAA..........................2811.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................ATAAACAAAGCGCTGTCGTGC.............................2111.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................GTTCGGCTTTGGTCTCGA-T-------------------------------------..............................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACAAAGCGCTGTCGTGCGAAAT........................2211.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................ATAAACAAAGCGCTGT..................................1620.501000000000000000000000000000000000000000000000000000000000010000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGG-TTCCGGACC------------------------------------TA--AATAAAGCGTCAATACTTTTTAACTCTC-GCAGATAAACAAAAAGCTGTCGTGCGAAATGGCAAAAGTGCTGAGA---ATGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................AAAGCTGTCGTGCGAAATGGCAA...................2311.001000001
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTTTTGGATTTATTGGTCTGGTTCGAAGAAAACCCCGCATTCGCTATAAATATAAATCGTAAATA-TTTTTAATTCTCAGATAATAAACAAAACGCTGTCGCGCAAAATGGCAAAAACGCTAAGA---CTGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................AAACGCTGTCGCGCAAAATGGCA....................2311.00110
...............................................................................................................................................................................................................................................................CGCTGTCGCGCAAAATGGCA....................2011.00110
.........................................................................................................................................................................................................................................................ACAAAACGCTGTCGCGCA............................1811.00110
............................................................................................................................................................................................................................................................AAACGCTGTCGCGCAAAATGGCAAAA.................2611.00110
droWil2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA--AATAAAACGTAAATAATTTTTAATTCTCAGATAATAAACAAAATGCTGTCGTGCAAAATGGCAAAAGCTCTGAAAATAATGACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................CAAAATGCTGTCGTGCAAAATG.......................2211.00100100
........................................................................................................................................................................................................................................................AACAAAATGCTGTCGTGCAAAATGGC.....................2611.00100100
.................................................................................................................................................................................................................................................GATAATAAACAAAATGCTGTC.................................2111.00100100
.......................................................................................................................................................................................................................................................AAACAAAATGCTGTCGTGCAAAATG.......................2511.00100100
.............................................................................................................................................................................................................................................CTCAGATAATAAACAAAATGCTGTCGT...............................2711.00100100
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGTCGTCGTGCAAAATGGCAAGAGTTCCGAAA---ATGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................ATGTCGTCGTGCAAAATGGCA....................2112.0020200000000
...........................................................................................................................................................................................................................................................AAAATGTCGTCGTGCAAAATGGCA....................2411.0010000001000
..............................................................................................................................................................................................................................................................ATGTCGTCGTGCAAAATGGCAAGAG................2511.0010100000000
...............................................................................................................................................................................................................................................................TGTCGTCGTGCAAAATGGCAAGAGTT..............2611.0010000010000
............................................................................................................................................................................................................................................................AAATGTCGTCGTGCAAAATGG......................2111.0010000010000
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGTCGTCGTGCAAAATGGCAAGAGTTCCGAAA---ATGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................AATGTCGTCGTGCAAAATGGC.....................2112.002000002
....................................................................................................................................................................................................................................................GATAAACAAAATGTCGTCGTGCAAAAT........................2711.001100000
.....................................................................................................................................................................................................................................................................CGTGCAAAATGGCAAGAGT...............1911.001010000
droAna3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAAAGTTCTGAAA---ATGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAAAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
droKik1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
droEug1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................AAAATGCCGTCGTGCAGAATGGC.....................23159.0059000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGAATGGCAAGAGTTCTGAAA---ATGAC26115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011202000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AATGCCGTCGTGCAGAATGGC.....................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000200000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................AAAATGCCGTCGTGCAGAATGG......................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGCCGTCGTGCAGAATGGCA....................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---ATG..2114.0040000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATGCCGTCGTGCAGAATGGC.....................2014.0040000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................CGTGCAGAATGGCAAGAGTTCTGAA.........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AAACAAAATGCCGTCGTGCAGAATGGC.....................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AAATGCCGTCGTGCAGAATGG......................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................AAATGCCGTCGTGCAGAATGGCA....................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATGCCGTCGTGCAGAATGG......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GAATGGCAAGAGTTCTGAAA---.....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACAAAATGCCGTCGTGCAGAATGGCA....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000
.................................................................................................................................................................................................................................................................................CAAGAGTTCTGAAA---ATGA.1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AAATGCCGTCGTGCAGAATGGCAAGAGTT..............2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TCGTGCAGAATGGCAAGAGTTCTGAA.........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGTCGTGCAGAATGGCAAGAG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTCTCAGATGATAAACAAAATGCCGT..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................TCGTGCAGAATGGCAAGAGTTC.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAAATGCCGTCGTGCAGAATGGCAA...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAAATGCCGTCGTGCAGAATGGCA....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTTTAATTCTCAGATGATAAAC............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACAAAATGCCGTCGTGCAGAATGG......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGTTCTG...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................AGAATGGCAAGAGTTCTGA..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GAATGGCAAGAGTTCTGAAA---AT...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGTTCTGAAA---A....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATGATAAACAAAATGCCGTCGTGCA............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AATGCCGTCGTGCAGAATGG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGTTCTGA..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TCGTGCAGAATGGCAAGAGTTCTGA..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGTCGTGCAGAATGGCAAGAGTT..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGCAGAATGGCAAGAGTTCTG...........2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGATAAACAAAATGCCGTCGTGCA............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GATGATAAACAAAATGCCGTCGTGCAG...........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGTT..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAAATGCCGTCGTGCAGAATG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AACAAAATGCCGTCGTGCAGAATG.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................TGCAGAATGGCAAGAGTTCTGAAA---AT...2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGTCGTGCAGAATGGCAAGA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGCCGTCGTGCAGAATGGCAAGA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACAAAATGCCGTCGTGCAGAATG.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGTTCTGAAA---AT...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GCAGAATGGCAAGAGTTCTG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGATAAACAAAATGCCGTC.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TAAACAAAATGCCGTCGTGCAGAATGG......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AATGGCAAGAGTTCTGAAA---AT...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GATGATAAACAAAATGCCGTCGTGCAGAA.........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CGTGCAGAATGGCAAGAGTT..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AAGAGTTCTGAAA---ATGAC1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGAATGGCAAGAGTTCTGAA.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AAATGCCGTCGTGCAGAATGGC.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CGTGCAGAATGGCAAGAGTTCTG...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CGTGCAGAATGGCAAGAG................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................AAACAAAATGCCGTCGTGC.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AATGGCAAGAGTTCTGAAA---A....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AAATGCCGTCGTGCAGAATGGCAAG..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CAAAATGCCGTCGTGCAGAAT........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATGCCGTCGTGCAGAATGGCAAGAG................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---.....1812.00200200000000000000
..........................................................................................................................................................................................................................................................................AGAATGGCAAGAGTTCTGAAA---.....2112.00200200000000000000
............................................................................................................................................................................................................................................................................AATGGCAAGAGTTCTGAAA---.....1912.00200200000000000000
.........................................................................................................................................................................................................................................................ACAAAATGCCGTCGTGCAGAATG.......................2312.00200200000000000000
..................................................................................................................................................................................................................................................................................AAGAGTTCTGAAA---ATGAC1812.00200000020000000000
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---AT...2012.00201100000000000000
...........................................................................................................................................................................................................................................................................GAATGGCAAGAGTTCTGAAA---.....2011.00100100000000000000
...................................................................................................................................................................................................................................................TGATAAACAAAATGCCGTCGT...............................2111.00100001000000000000
.......................................................................................................................................................................................................................................................................TGCAGAATGGCAAGAGTTCTGAAA---.....2411.00100100000000000000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGT...............1811.00100000000001000000
.......................................................................................................................................................................................................................................................AAACAAAATGCCGTCGTG..............................1811.00110000000000000000
............................................................................................................................................................................................................................................................................AATGGCAAGAGTTCTGAAA---A....2011.00100100000000000000
................................................................................................................................................................................................................................................................................GCAAGAGTTCTGAAA---.....1511.00100000000010000000
..................................................................................................................................................................................................................................................................................AAGAGTTCTGAAA---AT...15150.07100000010000000000
droSec2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGAAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................AAGAGTTCTGAAA---ATGAC1812.0020020
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---.....1812.0020020
............................................................................................................................................................................................................................................................AAATGCCGTCGTGAAGAAT........................1911.0010010
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---A....1911.0010010
.......................................................................................................................................................................................................................................................................TGAAGAATGGCAAGAGTTCT............2011.0010010
.............................................................................................................................................................................................................................................................AATGCCGTCGTGAAGAATG.......................1911.0010010
.........................................................................................................................................................................................................................................................ACAAAATGCCGTCGTGAAGAATGG......................2411.0010010
......................................................................................................................................................................................................................................................TAAACAAAATGCCGTCGTGAAGAATGG......................2711.0010010
...........................................................................................................................................................................................................................................................................GAATGGCAAGAGTTCTGAA.........1911.0010010
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---ATG..2111.0010100
droYak3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................AATGCCGTCGTGCAGAATGGC.....................2113.00300100020000
.........................................................................................................................................................................................................................ATCGTAAATA-TTTTTAATTCTCAG.....................................................2412.00202000000000
.......................................................................................................................................................................................................................................................AAACAAAATGCCGTCGTGCAGA..........................2211.00100000010000
..............................................................................................................................................................................................................................................................ATGCCGTCGTGCAGAATGGC.....................2011.00100001000000
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---A....1911.00110000000000
.........................................................................................................................................................................................................................................................................CAGAATGGCAAGAGTTCTGAAA---.....2211.00100000100000
..........................................................................................................................................................................................................................................................................AGAATGGCAAGAGTTCTGAAA---A....2211.00110000000000
.....................................................................................................................................................................................................................................................................CGTGCAGAATGGCAAGAGTTCTGA..........2411.00100000010000
........................................................................................................................................................................................................................................................AACAAAATGCCGTCGTGCAGAATGGC.....................2611.00101000000000
..................................................................................................................................................................................................................................................................CGTCGTGCAGAATGGCAAGAGTTCTGAA.........2811.00100000010000
.................................................................................................................................................................................................................................................................CCGTCGTGCAGAATGGCAAGA.................2111.00100000010000
.......................................................................................................................................................................................................................AAATCGTAAATA-TTTTTAATTCTCA......................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................CGTGCAGAATGGCAAGAGTTCT............2211.00101000000000
.............................................................................................................................................................................................................................................CTCAGATGATAAACAAAATGCCGTC.................................2511.00100000010000
.................................................................................................................................................................................................................................................GATGATAAACAAAATGCCGTCGTG..............................2411.00100000010000
.............................................................................................................................................................................................................................................................AATGCCGTCGTGCAGAATGGCA....................2211.00100000010000
.......................................................................................................................................................................................................................................................AAACAAAATGCCGTCGTGCAGAATGGC.....................2711.00100000010000
.........................................................................................................................................................................................................................................................ACAAAATGCCGTCGTGCAGAATG.......................2311.00101000000000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGTTCT............2111.00100000010000
.............................................................................................................................................................................................................................................CTCAGATGATAAACAAAATGCCGTCGTGC.............................2911.00100000010000
......................................................................................................................................................................................................................................................................GTGCAGAATGGCAAGAGTT..............1911.00100000010000
............................................................................................................................................................................................................................................................AAATGCCGTCGTGCAGAATGGC.....................2211.00100000010000
droEre2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAATCGTAAATA-TTTTTAATTCTCAGATGATAAACAAAATGCCGTCGTGCAGAATGGCAAGAGTTCTGAAA---ATGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................TGCCGTCGTGCAGAATGGCAAGAGT...............2512.0020000002
.............................................................................................................................................................................................................................................................................ATGGCAAGAGTTCTGAAA---ATGAC2311.0010000100
.............................................................................................................................................................................................................................................CTCAGATGATAAACAAAATGCCGTC.................................2511.0010000100
.............................................................................................................................................................................................................................................CTCAGATGATAAACAAAATGCCGT..................................2411.0010000010

Generated: 05/17/2015 at 03:29 AM