ID:

dvi_14219

 Coordinate:

scaffold_13042:966081-966231 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1 -7.1 -6.9

Flybase annnotation

exon [dvir_GLEANR_16274:1]; CDS [Dvir\GJ15838-cds]; intron [Dvir\GJ15838-in]

No Repeatable elements found

Sense Strand Reads

-----------------------###########################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGCAAATATCCAAACGTAACGCAATGGCTGCTAGATTTATACAGAGAATTGTAAGAATACAAAGGATATTAGTATAACAATATTATTAACAGCTTGCCAGTTTAGCACAAGCAAACATTGTGTGCCGCGATTGCCAACCCTTTCGCAACACCGCCTCCTCCCCCGCGCCCCAAGCAACATTTGCCCATTTCTGATTACGTGCGGCCTTCTAACGGGGAGGCGAAAAAAAAACCTAATAATACAGCTAAAAC
**************************************************(((((.........((((((........))))))........)))))..((((.((....))))))......********************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060667
160_females_carcasses_total
 M028
head
 M061
embryo
 SRR060672
9x160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060658
140_ovaries_total
 SRR060666
160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 V053
head
........................TGGCTGCTAGATTTATACA................................................................................................................................................................................................................ 19 0 1 5.00 5 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GCAAATATCCAAACGTAACGC..................................................................................................................................................................................................................................... 21 0 1 4.00 4 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGGCTGCTAGATTTATACAGAGA............................................................................................................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GTAACGCAATGGCTGCTAGATT...................................................................................................................................................................................................................... 22 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGGCTGCTAGATTTATACAGAGAATTATC...................................................................................................................................................................................................... 29 2 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.......................ATGGCTGCTAGATTTATACA................................................................................................................................................................................................................ 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGTAACGCAATGGCTGCTAGAT....................................................................................................................................................................................................................... 22 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................GCCCATTTCTGATTACGTGCG................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAACGTAACGCAATGGCTGCTAGATT...................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CGTAACGCAATGGCTGCTAGATTTA.................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GGCTGCTAGATTTATACAGAG............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AATGGCTGCTAGATTTATACAGAGAA........................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AACGTAACGCAATGGCTGCTAGAT....................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................AACGCAATGGCTGCTAGATT...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..CAAATATCCAAACGTAACGCAATGGCTG............................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AATATCCAAACGTAACGC..................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TTAGCACAAGCAAACATTGTG................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................GTAAGAATACAAAGGATATTAGT.................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGGCTGCTAGATTTATACAGAGAAT.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCTAGATTTATACAGAGAAT.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....ATATCCAAACGTAACGCAA................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GTGTGCCGCGATTGCCAGCCC............................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCTAGATTTATACAGAGAATTAT....................................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GTAATGGCTGCTAGATTTATACAGAGA............................................................................................................................................................................................................ 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................AGAATTGTAAGAATGCAAAGGA......................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....AATATCCAAACGTAACGCAAT.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................AATGGCTGCTAGATTTATACAGAGA............................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AGATTTATACAGAGAATTATCA..................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAACGTAACGCAATGGCTGCTAG......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........CCAAACGTAACGCAATGGCT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................TAACGCAATGGCTGCTAGA........................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GGCTGCTAGATTTATACA................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CAAACGTAACGCAATGGCTGCT........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACGCAATGGCTGCTAGATTTATACAGA.............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GTGCCGCGATTGCCAACCCTTTCGCA........................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCCTTCTAACGGGGGGGC.............................. 18 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................................AGATTTATACAGAGAATTATC...................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAACGTAACGCAATGGCTGGTA.......................................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGCTAGATTTATACAGAGA............................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................AGATTTATACAGAGAATTAT....................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..CAAATATCCAAACGTAACGC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................GCTGCTAGATTTATACAGAGAAT.......................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................CTGCTAGATTTATACAGAGAATT......................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGGCTGCTAGATTTATACAGAG............................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGGCTGCTCGATTTATACAGAGAA........................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................TGGCTGCTAGATTTATACAGAGAA........................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........CCAAACGTAACGCAATGGC............................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TCCAAACGTAACGCAATGGCTGCTAG......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................ATGGCTGCTAGATTTATACAGAGA............................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................TAACGCAATGGCTGCTAGATTTA.................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................ACATTTCCCCAGTTCTGATT....................................................... 20 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GATTTATACAGAGAATTATC...................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GTCACGCAATGGCTGATAGG........................................................................................................................................................................................................................ 20 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................AAAGGATAATAGTATTAC............................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................TTACAATATTATTAACAGCA............................................................................................................................................................. 20 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTCGCAACAGAGCCGCCTC........................................................................................... 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TAACGGGGAGGTGAATCA........................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................TACAATATTATTAACAGCA............................................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

ACGTTTATAGGTTTGCATTGCGTTACCGACGATCTAAATATGTCTCTTAACATTCTTATGTTTCCTATAATCATATTGTTATAATAATTGTCGAACGGTCAAATCGTGTTCGTTTGTAACACACGGCGCTAACGGTTGGGAAAGCGTTGTGGCGGAGGAGGGGGCGCGGGGTTCGTTGTAAACGGGTAAAGACTAATGCACGCCGGAAGATTGCCCCTCCGCTTTTTTTTTGGATTATTATGTCGATTTTG
*********************************************************************************************************************************(((((.........((((((........))))))........)))))..((((.((....))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060658
140_ovaries_total
 SRR060674
9x140_ovaries_total
 SRR060679
140x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 SRR060686
Argx9_0-2h_embryos_total
........................................................................................TGTCGAACGGTCAAATCGTGTT............................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................CGCGGGGTTCGTTGTAAACG................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..............GCATTGCGTTCCCGACGATCT........................................................................................................................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................GTTTGTAACACACGGCGCTAA....................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................................................GGGTGGGAAAGCGTGGAGGCG................................................................................................. 21 3 3 0.33 1 0 0 0 0 1 0
...........TGGGCATTGGGTTACCGA.............................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13042:966031-966281 + dvi_14219 TGCAAAT-ATCCA------AACGTAACGCAATGGCTGCTAGATTTATACAGAGAATTGTAAGAATA--CA---AAGGATATT--AGTATAACAA--T---ATTATTAACAGCTTGCCAGTTTAG-------------CACAAGCAAA---CATTGT--GTGCCGCGATT--GCCAACCCTTT-------------------------CGCAACAC---------C-----G-------------CCTCCT-CC--CC-----------------------------------------CGCGCCCCAA--G-----C---------AACAT--TTGCCC------------ATTTCTGATTACGTGCG-GCCTTCTAACGGGGAGGCGAAAAAAAAACCTAAT------AA-------T-----ACAGCTAAAAC
droMoj3 scaffold_6328:2952142-2952422 + TGCAAGTAACCCA---AA-AACGCAACGCAATGGCTGCTAGATTTATACAGAAAATTGTAAGATCA--TA---AGAGAGTTT--AATAAAATAA--T---TTTA---ACAGCTTGCCAAATTAG--------------TTAAGCAAA---CATTGTATGTGCCGCGACT--GTCAACCCTTT-------------------------CGCAATTC---------TCCTTCGCCTTCT--------------GT--CCCGCAGACACATACACG-C-------------------ATACAGA------T--G-----C---------AATAT--TTGCCC------------ATTTGTGATTACGTGCG-CCCTTCCA----GGAGGGGAAA---GAAACCAAAAGAAATAACTAATAATAACGAA--ACATAAAC
droGri2 scaffold_15081:2089696-2089923 + TGCAAAT-ATCAA-------ACTCAACGCAATGGCTGCTAGATTTATACAGAAAATTGTAAGAATA--CA---AAGGATAAT--ATCATAATAA--T---ATTAACTACGGCTTGCGAGTTATG--------------ACAAGCAAA---C-------------------------------------------------ATTGTGCTGCGCTTG----------------------------T--T---C-GCCCC--------------CATCCTGCCGCAACGTCTCCCCCAT-------------------------------------------------C------CCATTGATTACGTGCGGCC-TTAT-------GGGGGA-C---AAAACTAATAATAATAAGAAAGAAAAA---TGA---TAAAC
droWil2 scf2_1100000004909:1820656-1820856 + TAAATA---------------CATAACACAATGGCTGCTAGATTTATACAGAAAATTGTAAGAATA--AAAAGTGTAGGAGA--AAAAGA---A-GC---GAT----------CGCCAGTTACGGCAAAGCATATTTTCAA----AA---C------------------------AGGCGCCCAAC-----TCAACTG-CCTCCCTTAGAGTCCC-------------------------------T------------------------CTCC-------------------GGAAAAAAAACGAA--C--------------------CATTCAATTGGATAA------TAGTGAAATATAT-------------------------------------C------AA-------------CTA---ACAAT
dp5 XL_group1a:5398909-5399141 + TGAAAATATAATA--------AGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAATA--TG---TGTAAATTT--AATTGAACACTGT---T--------------------CTAGCAAATTATTCCTCTGAACGAAA---CATCGC--CT--CGAAGTT--TCC---TCTTC----------------------------------GACCACCCC-----A-------------CCCACCC-C--CTTGT---------------------------------------------------GCAACCACCCCTTGGGGCAT------TTAAGACCG-----ACAATTGATTACGTTCTTGG-TTAT-------TGTCTA-C---AAAAATAAT------GA-------------A--A--ATAAA
droPer2 scaffold_14:2047067-2047299 + TGAAAATATATTA--------AGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAATA--TG---TGTAAATTT--AATTGAACACTGT---T--------------------CTAGCAAATTATTTCTCTGAACGAAA---CATCGC--CT--CGAAGTT--TCC---TCTTC----------------------------------GACCACCCC-----A-------------CCCACCC-C--CTTGT---------------------------------------------------GCAACCACCCCTTGGGGCAT------TTAAGACCG-----ACTATTGATTACGTTCTTGG-TTAT-------TGTCTA-C---AAAAATAAT------GA-------------A--A--ATAAA
droAna3 scaffold_13417:2517924-2518104 + TGCAAAC---CAAGTCCT-AAGACAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGGAAG--TG---TGTAGATTT--AAGCGTCCA--GC---GCT--------------------TGCCATTTATCCCCGTAACCGAGAACCCCTTGTT---------------------------------------------------------------------------------------------C-GT-----------------------------------------------------------------------------------CCAGGACAG------CAGCTGATTACGTGCT-GG-TCGC-------TGGCTA------AAAATAAT------AG-------------CGAACT-CCAC
droBip1 scf7180000396003:16814-16995 + TGCAAA---CCGAGTCCTAAAGACAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGGAAG--TG---TGTAGATTT--AAGCGTCCA--GC---GCT--------------------TGCCATTTATCCCCGTAACCGAGAACCTCTTGTA---------------------------------------------------------------------------------------------C-GG-----------------------------------------------------------------------------------CCAGGACAG------CAGCTGATTACGTGCT-GG-TCGT-------TGGCTA------AAAATAAT------AG-------------CGAACT-CCAC
droKik1 scf7180000302517:1144764-1144979 - TGCAAAT-CCCGA---------GCAACGCAATGGCCGCTAGATTCATACAGAAAATTGTAAGAGCCCCCG---TGTATATCTATAAGCAACGCA-ACCCCATC---------------------------A-------------------------------------------------------------GTCCGG-CCCC------------------------------TTCTGTCCTGT--C---C-GCCCA--------------CG-C-------------------AA-------TCCGATCCCCAACG--------------TTCCCCGCAGGACAGCAGCAGCAGTTGATTACGTGCT-G-----TAGCCGCCTGGCTA-----AAA-ATAATAGTGTCGA-------T-----GC-AGCAGAAC
droFic1 scf7180000454073:1691473-1691649 - ----------------------GCAACGCAATGGCTGCTCGATTCATACAGAAAATTGTAAGAGCCC-CG-TGTGT----------------------------------------CTG----------------------------------TGT--GTGCTTTGTGTGTGTGTAGGCTTTAAGTTGAATTGACCCGGCCACG-------CCC------------------------------CCT--------------------------------------------ACCCGCCCACATCGAAATCC----------------------CTAAAAAGGACTG------CAGTTGATTACGTGCA-------C-------TGGCTG-----A------------------------------CAAAAAGTAC
droEle1 scf7180000490751:1072705-1072898 - TGCAAAAGACCCA--------GGCAACACAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGCGCCTCT-AACCC-------------------------GAATCC-------------------------------------------------------------GTCTT-CCCCCGCGCCGCGTCAAC----------------------------CC--------------------------------------------TTTTCGCCCACGTTCGAATCCC----C--------------AA-TCCGCAGGACAG------CAATTGATTACGTGCT-GG---------------CTG-----AAAAGTACT------GG-------------CCAACTACAAC
droRho1 scf7180000761121:229698-229883 + TGCAAAAAACCGA--------GGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGCGCCTTA-AACCC---------------------------------------------------------------------------------------------ACCT-CCCCCGCGCCGCGGCATC----------------------------CC--------------------------------------------TTCTCGCCCACGTCCAAAA-C-----C--------------AATTCCGCAGGACAG------CAATTGATTACGTGCT-GG---------------CTG-----AAAAGTACT------GG-------------CCAACTACAAC
droBia1 scf7180000302069:1185759-1185946 + TGCAAAA-ACCGA---------GCAACGCAATGGCTGCTAGATTCGTACAGAAAATTGTAAGAA-C--CG---TGTAGAGTT--AAGCGACCTATGC---T--------------------CCC--------------------------------------------------------------------GACCCC-TCCCGCGCCGCGTTCC-----------------------------CC--------------------------------------------CTCTCGCCGACGACCAGA--C-----C---------GAA--AATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAACCTAAT------GG-------------CCAACTACCAC
droTak1 scf7180000415169:881701-881857 + TGCAAAA-ACCGA--------GGCAACGCAATGGCTGCTAGATTCGTACAGAAAATTGTAAGAA-C--CG---TGTAGAGTT--AAGC---------------------------------------------------------------------------------------------------------------CCCCGCGTCGCGATTC---------CC------------------CCC--------CG--------------CTCC-------------------TTC---CGACCGAA--C-----A---------AAT--AATTCCGCAGGACAG------CCGTTGATTACGTGCT-G------------------------------------------------------CCAACTACCAC
droEug1 scf7180000409109:35149-35333 + TGCAAAA-ACCGA--------GGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAT-T--CG---TGTAGACTT--AAGCTT---A-GA--------------------------------------------------------------------------------------------GTTGTCCCGCCCCCGCGCCGCGTTTC----------------------------TCC--------------------------------------------CTCTCGCCCTTCTCGCCCTTC-----C--------------AATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAACTAAT------GG-------------CCAACAACCAC
dm3 chrX:19415571-19415753 - TGCAAAA-ACCGA--------TCCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TTTAGGCTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGACCCG-CCCCGCGTCGCGCCTC----------------------------T--T---AAC--CC--------------CACC-------------------ATACAGCGACCAAA--C-----C--------------AATTCTGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAGTACT------GG-------------CCAACTACCAC
droSim2 x:18305171-18305352 - TGCAAAA-ACCGA--------TCCATCGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TTTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTTACCCG-CCCCGCGTCGCGTCTC----------------------------T--T----CC--CC--------------CGCC-------------------ATACAGCGACCAAA--C-----C--------------AATTCTGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAATACT------GG-------------CCAACTACCAC
droSec2 scaffold_8:1697879-1698060 - TGCAAAA-ACCGA--------TCCATCGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TTTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGACCCG-CCCCGCGTCGCGTCTC----------------------------T--T----CC--CC--------------CACC-------------------ATACAGCGACCAAA--C-----C--------------AATTCTGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAATACT------GG-------------CCAACTACCAC
droYak3 X:11921612-11921791 + TGCAAAA-ACCGA--------TCCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGACCCGCCCCCGCGTCGCGCCCCC---------------------------------------CT--------------CTCT-------------------ATACAGCGACCAAA--C-----C--------------AATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAGTACT------GG-------------CCAACAACCAC
droEre2 scaffold_4690:9652725-9652900 - TGCAAAA-ACCGA--------TCCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGAGA---------------------------------------------------------------------------------------------------CTTGACCCGCCCCCGCGTCGCGCCCAT---------------------------------------TT--------------CTCT-------------------ATACAGCGACCAA-------------------------ATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAGTACT------GG-------------CCAACTACCAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGCAAAT-ATCCA------AACGTAACGCAATGGCTGCTAGATTTATACAGAGAATTGTAAGAATA--CA---AAGGATATT--AGTATAACAA--T---ATTATTAACAGCTTGCCAGTTTAG-------------CACAAGCAAA---CATTGT--GTGCCGCGATT--GCCAACCCTTT-------------------------CGCAACAC---------C-----G-------------CCTCCT-CC--CC-----------------------------------------CGCGCCCCAA--G-----C---------AACAT--TTGCCC------------ATTTCTGATTACGTGCG-GCCTTCTAACGGGGAGGCGAAAAAAAAACCTAAT------AA-------T-----ACAGCTAAAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................TGGCTGCTAGATTTATACA.................................................................................................................................................................................................................................................................................................................................................................................................1915.005003000000000000002000000000000000000000000000000000000000000000
.GCAAAT-ATCCA------AACGTAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................2114.004002100000000000001000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTTATACAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
......................GTAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2212.002011000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTTATACA.................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000000000000000000000000000000000000000000000000000000000000
.....................CGTAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000002
...............................................................................................................................................................................................................................................................................................................................................GCCC------------ATTTCTGATTACGTGCG-..................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
............A------AACGTAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................CGTAACGCAATGGCTGCTAGATTTA.....................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................GGCTGCTAGATTTATACAGAG..............................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTTATACAGAGAA............................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...................AACGTAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
........................AACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
..CAAAT-ATCCA------AACGTAACGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
....AAT-ATCCA------AACGTAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................TTAG-------------CACAAGCAAA---CATTGT--G....................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.........................................................GTAAGAATA--CA---AAGGATATT--AGT............................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTTATACAGAGAAT...........................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................TGCTAGATTTATACAGAGAAT...........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.....AT-ATCCA------AACGTAACGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
....AAT-ATCCA------AACGTAACGCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTTATACAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............A------AACGTAACGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........CCA------AACGTAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000100000000000000000000000000000000000
.......................TAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................GGCTGCTAGATTTATACA.................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........CA------AACGTAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
.........................ACGCAATGGCTGCTAGATTTATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GTGCCGCGATT--GCCAACCCTTT-------------------------CGCA................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................TGCTAGATTTATACAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
..CAAAT-ATCCA------AACGTAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.................................GCTGCTAGATTTATACAGAGAAT...........................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
..................................CTGCTAGATTTATACAGAGAATT..........................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTTATACAGAG..............................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTTATACAGAGAA............................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
..........CCA------AACGTAACGCAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.........TCCA------AACGTAACGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTTATACAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................TAACGCAATGGCTGCTAGATTTA.....................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGCAAGTAACCCA---AA-AACGCAACGCAATGGCTGCTAGATTTATACAGAAAATTGTAAGATCA--TA---AGAGAGTTT--AATAAAATAA--T---TTTA---ACAGCTTGCCAAATTAG--------------TTAAGCAAA---CATTGTATGTGCCGCGACT--GTCAACCCTTT-------------------------CGCAATTC---------TCCTTCGCCTTCT--------------GT--CCCGCAGACACATACACG-C-------------------ATACAGA------T--G-----C---------AATAT--TTGCCC------------ATTTGTGATTACGTGCG-CCCTTCCA----GGAGGGGAAA---GAAACCAAAAGAAATAACTAATAATAACGAA--ACATAAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....AGTAACCCA---AA-AACGCAACGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
..CAAGTAACCCA---AA-AACGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...................................................................................................................................................................................................................................TTCGCCTTCT--------------GT--CCCGCAGAC...........................................................................................................................................................................2111.001100000
....................ACGCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......................GCAACGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................GACACATACACG-C-------------------ATACAGA------T--G-----C---------A............................................................................................................2411.001100000
................AA-AACGCAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
TGCAAAT-ATCAA-------ACTCAACGCAATGGCTGCTAGATTTATACAGAAAATTGTAAGAATA--CA---AAGGATAAT--ATCATAATAA--T---ATTAACTACGGCTTGCGAGTTATG--------------ACAAGCAAA---C-------------------------------------------------ATTGTGCTGCGCTTG----------------------------T--T---C-GCCCC--------------CATCCTGCCGCAACGTCTCCCCCAT-------------------------------------------------C------CCATTGATTACGTGCGGCC-TTAT-------GGGGGA-C---AAAACTAATAATAATAAGAAAGAAAAA---TGA---TAAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............A-------ACTCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
droWil2
TAAATA---------------CATAACACAATGGCTGCTAGATTTATACAGAAAATTGTAAGAATA--AAAAGTGTAGGAGA--AAAAGA---A-GC---GAT----------CGCCAGTTACGGCAAAGCATATTTTCAA----AA---C------------------------AGGCGCCCAAC-----TCAACTG-CCTCCCTTAGAGTCCC-------------------------------T------------------------CTCC-------------------GGAAAAAAAACGAA--C--------------------CATTCAATTGGATAA------TAGTGAAATATAT-------------------------------------C------AA-------------CTA---ACAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..AATA---------------CATAACACAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2215.00540010
...ATA---------------CATAACACAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2613.00301020
.............................AATGGCTGCTAGATTTATAC..................................................................................................................................................................................................................................................................................................................................................................................................2013.00321000
..............................ATGGCTGCTAGATTTATACA.................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
............................CAATGGCTGCTAGATTTATA...................................................................................................................................................................................................................................................................................................................................................................................................2012.00211000
..............................ATGGCTGCTAGATTTATAC..................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.AAATA---------------CATAACACAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...............................................................................................................................................................................................................AGAGTCCC-------------------------------T------------------------CTCC-------------------GGAAAAGG.....................................................................................................................................2111.00100010
................................GGCTGCTAGATTTATACAGAAAATT..........................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...ATA---------------CATAACACAATGGCTGCC............................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
...ATA---------------CATAACACAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
......................ATAACACAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...ATA---------------CATAACACAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....................CATAACACAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..AATA---------------CATAACACAATGGCTGCTAGATTT......................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...............................TGGCTGCTAGATTTATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
...........................ACAATGGCTGCTAGATTTATAC..................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...............................TGGCTGCTAGATTTATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..AATA---------------CATAACACAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.........................................................................................................................................................................................................................................................................................................................................................A------TAGTGAAATATAT-------------------------------------C------AA-------------CTA---.....2011.00100001
....TA---------------CATAACACAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
............................CAATGGCTGCTAGATTTAT....................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..AATA---------------CATAACACAATGGCTGCG............................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
dp5
TGAAAATATAATA--------AGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAATA--TG---TGTAAATTT--AATTGAACACTGT---T--------------------CTAGCAAATTATTCCTCTGAACGAAA---CATCGC--CT--CGAAGTT--TCC---TCTTC----------------------------------GACCACCCC-----A-------------CCCACCC-C--CTTGT---------------------------------------------------GCAACCACCCCTTGGGGCAT------TTAAGACCG-----ACAATTGATTACGTTCTTGG-TTAT-------TGTCTA-C---AAAAATAAT------GA-------------A--A--ATAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................ACGCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100100000
.....................AGCAACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
............A--------AGCAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..........ATA--------AGCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........AATA--------AGCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
......................GCAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............................TGGCTGCTAGATTCATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........AATA--------AGCAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
...........TA--------AGCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
.GAAAATATAATA--------AGCAACGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000000
.........AATA--------AGCAACGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
............A--------AGCAACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................CAACGCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......................GCAACGCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................CGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........TA--------AGCAACGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....ATATAATA--------AGCAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................................GATTCATACAGAAAATTGTC.......................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
..........ATA--------AGCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........................CGCAATGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................ACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................CGCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................AGTT--TCC---TCTTC----------------------------------GACCACCC...................................................................................................................................................................................................................2011.0010010000000
..........ATA--------AGCAACGCAATGGCTGCTAGATTCAC....................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
.......................................AGATTCATACAGAAAATTGTC.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
............A--------AGCAACGCAATGGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.........................ACGCAATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................GAACGAAA---CATCGC--CT--CGAA.............................................................................................................................................................................................................................................................................2011.0010100000000
.....ATATAATA--------AGCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
........................AACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................GTAAATTT--AATTGAACACTGT---T--------------------..........................................................................................................................................................................................................................................................................................................................2211.0010010000000
droPer2
TGAAAATATATTA--------AGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAATA--TG---TGTAAATTT--AATTGAACACTGT---T--------------------CTAGCAAATTATTTCTCTGAACGAAA---CATCGC--CT--CGAAGTT--TCC---TCTTC----------------------------------GACCACCCC-----A-------------CCCACCC-C--CTTGT---------------------------------------------------GCAACCACCCCTTGGGGCAT------TTAAGACCG-----ACTATTGATTACGTTCTTGG-TTAT-------TGTCTA-C---AAAAATAAT------GA-------------A--A--ATAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........TTA--------AGCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................GATTACGTTCTTGG-TTAT-------TGTC................................................2211.001100000
.........ATTA--------AGCAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........TATTA--------AGCAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...AAATATATTA--------AGCAACGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................AATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.......ATATTA--------AGCAACGCAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........ATTA--------AGCAACGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................AACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................ACGCAATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droAna3
TGCAAAC---CAAGTCCT-AAGACAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGGAAG--TG---TGTAGATTT--AAGCGTCCA--GC---GCT--------------------TGCCATTTATCCCCGTAACCGAGAACCCCTTGTT---------------------------------------------------------------------------------------------C-GT-----------------------------------------------------------------------------------CCAGGACAG------CAGCTGATTACGTGCT-GG-TCGC-------TGGCTA------AAAATAAT------AG-------------CGAACT-CCACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................T-AAGACAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2414.004000004
................CT-AAGACAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2513.003000003
......C---CAAGTCCT-AAGACAACGCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
...............CCT-AAGACAACGCAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................1912.002001001
.......................CAACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2212.002110000
.................T-AAGACAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
...................AAGACAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
....AAC---CAAGTCCT-AAGACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
............................CAATGGCTGCTAGATTCATACAGAAAA............................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........AAGTCCT-AAGACAACGCAATGGCTGCC............................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
............AGTCCT-AAGACAACGCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.....................GACAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................TGCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
........................AACGCAATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................GGCTGCTAGATTCATACAGAAAATTGTC.......................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
........................AACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.............................AATGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
......C---CAAGTCCT-AAGACAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.....................GACAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
....................AGACAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...............CCT-AAGACAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..............TCCT-AAGACAACGCAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............AGTCCT-AAGACAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
................CT-AAGACAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................CGCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
......C---CAAGTCCT-AAGACAACGCAATG..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................ATGGCTGCTAGATTCATA...................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
...........AAGTCCT-AAGACAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..........................................................................................................................................................GTT---------------------------------------------------------------------------------------------C-GT-----------------------------------------------------------------------------------CCAGGACAG------CAGCTG.............................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................TACGTGCT-GG-TCGC-------TGGC................................................1811.001010000
.................T-AAGACAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
TGCAAAC---CAAGTCCT-AAGACA..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
......................ACAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................GACAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
TGCAAAC---CAAGTCCT-AAGACAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
....AAC---CAAGTCCT-AAGACAACGCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....AAC---CAAGTCCT-AAGACAACGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
TGCAAA---CCGAGTCCTAAAGACAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGGAAG--TG---TGTAGATTT--AAGCGTCCA--GC---GCT--------------------TGCCATTTATCCCCGTAACCGAGAACCTCTTGTA---------------------------------------------------------------------------------------------C-GG-----------------------------------------------------------------------------------CCAGGACAG------CAGCTGATTACGTGCT-GG-TCGT-------TGGCTA------AAAATAAT------AG-------------CGAACT-CCACSizeHit CountTotal NormTotal
No Reads
droKik1
TGCAAAT-CCCGA---------GCAACGCAATGGCCGCTAGATTCATACAGAAAATTGTAAGAGCCCCCG---TGTATATCTATAAGCAACGCA-ACCCCATC---------------------------A-------------------------------------------------------------GTCCGG-CCCC------------------------------TTCTGTCCTGT--C---C-GCCCA--------------CG-C-------------------AA-------TCCGATCCCCAACG--------------TTCCCCGCAGGACAGCAGCAGCAGTTGATTACGTGCT-G-----TAGCCGCCTGGCTA-----AAA-ATAATAGTGTCGA-------T-----GC-AGCAGAACSizeHit CountTotal NormTotal
No Reads
droFic1
----------------------GCAACGCAATGGCTGCTCGATTCATACAGAAAATTGTAAGAGCCC-CG-TGTGT----------------------------------------CTG----------------------------------TGT--GTGCTTTGTGTGTGTGTAGGCTTTAAGTTGAATTGACCCGGCCACG-------CCC------------------------------CCT--------------------------------------------ACCCGCCCACATCGAAATCC----------------------CTAAAAAGGACTG------CAGTTGATTACGTGCA-------C-------TGGCTG-----A------------------------------CAAAAAGTACSizeHit CountTotal NormTotal
No Reads
droEle1
TGCAAAAGACCCA--------GGCAACACAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGCGCCTCT-AACCC-------------------------GAATCC-------------------------------------------------------------GTCTT-CCCCCGCGCCGCGTCAAC----------------------------CC--------------------------------------------TTTTCGCCCACGTTCGAATCCC----C--------------AA-TCCGCAGGACAG------CAATTGATTACGTGCT-GG---------------CTG-----AAAAGTACT------GG-------------CCAACTACAACSizeHit CountTotal NormTotal
No Reads
droRho1
TGCAAAAAACCGA--------GGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGCGCCTTA-AACCC---------------------------------------------------------------------------------------------ACCT-CCCCCGCGCCGCGGCATC----------------------------CC--------------------------------------------TTCTCGCCCACGTCCAAAA-C-----C--------------AATTCCGCAGGACAG------CAATTGATTACGTGCT-GG---------------CTG-----AAAAGTACT------GG-------------CCAACTACAACSizeHit CountTotal NormTotal
No Reads
droBia1
TGCAAAA-ACCGA---------GCAACGCAATGGCTGCTAGATTCGTACAGAAAATTGTAAGAA-C--CG---TGTAGAGTT--AAGCGACCTATGC---T--------------------CCC--------------------------------------------------------------------GACCCC-TCCCGCGCCGCGTTCC-----------------------------CC--------------------------------------------CTCTCGCCGACGACCAGA--C-----C---------GAA--AATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAACCTAAT------GG-------------CCAACTACCACSizeHit CountTotal NormTotal
No Reads
droTak1
TGCAAAA-ACCGA--------GGCAACGCAATGGCTGCTAGATTCGTACAGAAAATTGTAAGAA-C--CG---TGTAGAGTT--AAGC---------------------------------------------------------------------------------------------------------------CCCCGCGTCGCGATTC---------CC------------------CCC--------CG--------------CTCC-------------------TTC---CGACCGAA--C-----A---------AAT--AATTCCGCAGGACAG------CCGTTGATTACGTGCT-G------------------------------------------------------CCAACTACCACSizeHit CountTotal NormTotal
No Reads
droEug1
TGCAAAA-ACCGA--------GGCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAT-T--CG---TGTAGACTT--AAGCTT---A-GA--------------------------------------------------------------------------------------------GTTGTCCCGCCCCCGCGCCGCGTTTC----------------------------TCC--------------------------------------------CTCTCGCCCTTCTCGCCCTTC-----C--------------AATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAACTAAT------GG-------------CCAACAACCACSizeHit CountTotal NormTotal
No Reads
dm3
TGCAAAA-ACCGA--------TCCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TTTAGGCTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGACCCG-CCCCGCGTCGCGCCTC----------------------------T--T---AAC--CC--------------CACC-------------------ATACAGCGACCAAA--C-----C--------------AATTCTGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAGTACT------GG-------------CCAACTACCACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................GGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................18114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200020000000200000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GA--------TCCAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002400000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000200000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGCTGCTAGATTCATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATA...................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GA--------TCCAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GA--------TCCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CC-------------------ATACAGCGACCAAA--C-----C--------------AAT.....................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GA--------TCCAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACCGA--------TCCAACGCAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000
.....................TCCAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GA--------TCCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A-ACCGA--------TCCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......A-ACCGA--------TCCAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
............A--------TCCAACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTCATACAGAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTCATACAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACCGA--------TCCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.........................ACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TGACCCG-CCCCGCGTCGCGCC..............................................................................................................................................................................................................................2112.0020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................GGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATTCTGCAGGACAG------CAGTTGAA...........................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................TGGCTGCTAGATTCATACAGAAAATTC.........................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............A--------TCCAACGCAATGGCTGCTAGATTCAT....................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................ACGCAATGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTCATACAATC..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACAGAAAATTGTAAGAC-C--CG---T.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................ACCAAA--C-----C--------------AATTCTGCAGGACAG------...................................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATAATC................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TTTAGGCTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGAC................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGCTGCTAGATTCATACAGAAAA............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCTGCTAGATTCATACAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AA-ACCGA--------TCCAACGCAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGA--------TCCAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGCTGCTAGATTCATACAG................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAAA-ACCGA--------TCCAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAA-ACCGA--------TCCAACGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAAA-ACCGA--------TCCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................TAGATTCATACAGAAAATTGTC.......................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GA--------TCCAACGCAATGGCTGCTAGATTCATA...................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCCAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............A--------TCCAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................GA---------------------------------------------------------------------------------------------------CTTGACCCG-CCCCGCGTC...................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACAGAAATC...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGCTGCTAGATTCATACAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTCATACAGATC.............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAA-ACCGA--------TCCAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCAATGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AGCGACCAAA--C-----C--------------AATTCTGCG...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................GCTGCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................AGATTCATACAGAAAATT..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A-ACCGA--------TCCAACGCAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACAA................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GCAATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................C--CG---TTTAGGCTT--AAGCGA---------------------------------------------------------------------------------------------------C.....................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAAA-ACCGA--------TCCAACGCAATGGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATACAGAAAATTGTAAGAC-C--C..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................CGCGTCGCGCCTC----------------------------T--T---AAC--CC--------------C...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................CGCGTCGCGCCTC----------------------------T--T---AAC--CC--------------CACC-------------------A............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGCCTC----------------------------T--T---AAC--CC--------------CACC-------------------AT...........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGTAAGAC-C--CG---TTTAGGCTT--A..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACAGAAAA............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AGCGACCAAA--C-----C--------------AATTCTGCA...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A-ACCGA--------TCCAACGCAATG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................TGGCTGCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............A--------TCCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAA-ACCGA--------TCCAACGCAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................C-------------------ATACAGCGACCAAA--C-----C--------------AAT.....................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................GTAAGAC-C--CG---TTTAGGCT..................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GA--------TCCAACGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CCCCGCGTCGCGCCTC----------------------------T--T---AAC--C...................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.......................CAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACAG................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACGCAATGGCTGCTAGATTCATACAGAAAAT...........................................................................................................................................................................................................................................................................................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CTGCTAGATTCATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CAATGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACCGA--------TCCAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CCGA--------TCCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ACC-------------------ATACAGCGACCAAA--C-----C--------------AA......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................CAATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTCATACAATC..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACGCAATGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCCAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACAATC..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACGCAATGGCTGCTAGATTCATACAG................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACGCAATGGCTGCTAGATTCATACAATC..............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AATGGCTGCTAGATTCATA...................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCTGCTAGATTCATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AATTGTAAGAC-C--CG---TTTAGGCTT--AAGC...........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................A---------------------------------------------------------------------------------------------------CTTGACCCG-CCCCGCGTCGC.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCCAACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGGCTGCTAGATTCATACATC...............................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GTTGATTACGTGCT-GG---------------CCC-----TG.......................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GCAGGACAG------CAGTTGACC..........................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
droSim2
TGCAAAA-ACCGA--------TCCATCGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TTTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTTACCCG-CCCCGCGTCGCGTCTC----------------------------T--T----CC--CC--------------CGCC-------------------ATACAGCGACCAAA--C-----C--------------AATTCTGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAATACT------GG-------------CCAACTACCACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........CCGA--------TCCATCGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
...........GA--------TCCATCGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2212.00200100000000100000
...........GA--------TCCATCGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020000000000000
.....AA-ACCGA--------TCCATCGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
....AAA-ACCGA--------TCCATCGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
....AAA-ACCGA--------TCCATCGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.................................GCTGCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...AAAA-ACCGA--------TCCATCGCAATGGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.............................................................................GACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTTACC...............................................................................................................................................................................................................................................1811.00100001000000000000
...................................................................................................................................................................................................................................................................................................................A--C-----C--------------AATTCTGCAGGACAG------...................................................................................1811.00110000000000000000
...............................................................C-C--CG---TTTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTTACCC..............................................................................................................................................................................................................................................2711.00101000000000000000
.......................CATCGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
............A--------TCCATCGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.GCAAAA-ACCGA--------TCCATCGC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.......................CATCGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...............................TGGCTGCTAGATTCATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...........GA--------TCCATCGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...........................................................................TAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTTACC...............................................................................................................................................................................................................................................2011.00110000000000000000
........................................GATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
........................ATCGCAATGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...........................................................AAGAC-C--CG---TTTAGAGC..................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
TGCAAAA-ACCGA--------TCCATCGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TTTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGACCCG-CCCCGCGTCGCGTCTC----------------------------T--T----CC--CC--------------CACC-------------------ATACAGCGACCAAA--C-----C--------------AATTCTGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAATACT------GG-------------CCAACTACCACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........GA--------TCCATCGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
.......................CATCGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................................GCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
............................CAATGGCTGCTAGATTCATACAG................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.........CCGA--------TCCATCGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...........GA--------TCCATCGCAATGGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
...............................................................C-C--CG---TTTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGA.................................................................................................................................................................................................................................................2411.0011000
......................................TAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................A--C-----C--------------AATTCTGCAGGACAG------CA.................................................................................2011.0010010
.........................................................................TTTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGAC................................................................................................................................................................................................................................................2111.0011000
...........GA--------TCCATCGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.........CCGA--------TCCATCGCAATGGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....................................CTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.........................TCGCAATGGCTGCTAGATTCA.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...........GA--------TCCATCGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.....AA-ACCGA--------TCCATCGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
TGCAAAA-ACCGA--------TCCATCGC......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...........GA--------TCCATCGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................................GGCTGCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
droYak3
TGCAAAA-ACCGA--------TCCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGCGA---------------------------------------------------------------------------------------------------CTTGACCCGCCCCCGCGTCGCGCCCCC---------------------------------------CT--------------CTCT-------------------ATACAGCGACCAAA--C-----C--------------AATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAGTACT------GG-------------CCAACAACCACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......A-ACCGA--------TCCAACGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000000000
...........GA--------TCCAACGCAATGGCTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..CAAAA-ACCGA--------TCCAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.....................................CTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.....................................................................................AGCGA---------------------------------------------------------------------------------------------------CTTGACCCGCCCCCGCGTCGCGC...............................................................................................................................................................................................................................2811.00100100000000
......A-ACCGA--------TCCAACGCAATGGC................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...............................TGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
................................GGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................AACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.............................AATGGCTGCTAGATTCAT....................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.......................CAACGCAATGGCTGCTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
.............................AATGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................CAACGCAATGGCTGCTAGATTCAT....................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...............................TGGCTGCTAGATTCATAC..................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..............................ATGGCTGCTAGATTCATACAGAA..............................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
droEre2
TGCAAAA-ACCGA--------TCCAACGCAATGGCTGCTAGATTCATACAGAAAATTGTAAGAC-C--CG---TGTAGACTT--AAGAGA---------------------------------------------------------------------------------------------------CTTGACCCGCCCCCGCGTCGCGCCCAT---------------------------------------TT--------------CTCT-------------------ATACAGCGACCAA-------------------------ATTCCGCAGGACAG------CAGTTGATTACGTGCT-GG---------------CCA-----AAAAGTACT------GG-------------CCAACTACCACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........GA--------TCCAACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2613.0032100000
.GCAAAA-ACCGA--------TCCAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
...........GA--------TCCAACGCAATGGCTGCTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........GA--------TCCAACGCAATGGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
........................AACGCAATGGCTGCTAGATTCATACA.................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...................................TGCTAGATTCATACAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...........GA--------TCCAACGCAATGGCTGCT............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
....AAA-ACCGA--------TCCAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
.................................................................................................................................................................................................................................................................................................................................................................AGTTGATTACGTGCT-GG---------------CC...............................................1911.0010100000
..........................CGCAATGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
.........................ACGCAATGGCTGCTAGATTC......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........GA--------TCCAACGCAATGGCTGCTAGATT.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
............A--------TCCAACGCAATGGCTGCTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
........................................GATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.............................AATGGCTGCTAGATTCATACAGA...............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
................................................................................................................................................................................................................................................................................................................CAA-------------------------ATTCCGCAGGACAG------CAGTTGATTA.........................................................................2711.0010000010
..........................................................TAAGAC-C--CG---TGTAGACTT--AAG............................................................................................................................................................................................................................................................................................................................................................2111.0010000100
....................................GCTAGATTCATACAGAAAATTGT........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
...............................TGGCTGCTAGATTCATACAGAAA.............................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.GCAAAA-ACCGA--------TCCAACGCAATGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000

Generated: 05/16/2015 at 10:00 PM