ID:

dvi_14160

 Coordinate:

scaffold_13042:530763-530913 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.0

Flybase annnotation

CDS [Dvir\GJ15778-cds]; exon [dvir_GLEANR_16215:6]; intron [Dvir\GJ15778-in]

Repeatable elements

NameClassFamilyStrand
(TTTTC)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12875:2887123-2887142 +
  2. scaffold_12875:15958887-15958906 -
  3. scaffold_12928:5678515-5678534 -
  4. scaffold_12963:18170356-18170375 -
  5. scaffold_12970:1633062-1633081 +
  6. dvi_14160  scaffold_13042:530848-530867 -
  7. scaffold_13047:2005312-2005331 +
  8. scaffold_13047:13325763-13325782 +
  9. scaffold_13047:13502955-13502974 -
  10. scaffold_13049:5014202-5014221 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTGCAAGAAATGACAGAGACAACATGCAAAAAAAAAAAACGTCACGTTCAACCGTTAAAGCGCCCGTTAAAAAGCAAATTGCAGCTAAACCAGAAAAAAAGAAAAGAAAGAAAAGAAAAGAAAAAGAAAAAAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTTTAGCTGTGTTAGTTTTATACCTTAAACAGTGCTTGCATTTGATGCCCAAGGAGACGACGAAGAGAGCTCGCTGCCCCAT
************************************************************************************************.........................(((...((......((((((.......)))))).......))...))).********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060658
140_ovaries_total
 M047
female body
 SRR060663
160_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060679
140x9_testes_total
 V047
embryo
 SRR060659
Argentina_testes_total
 SRR060666
160_males_carcasses_total
 V116
male body		 SRR060682
9x140_0-2h_embryos_total
 M061
embryo
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060677
Argx9_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
.......................................................................................................AAAAGAAAGAAAAGAAGAGAAAGAGA.......................................................................................................................... 26 2 1 2.00 2 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GACGACGAAGAGAGCTCGCT....... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TTCCTGTTCTGTCGATTGTCATGTTCC................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATTTGATGCCCAAGGAGACGACGAAGA................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CACAGACGACGAAGAGAGCTCGC........ 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTGCTTGCATTTGATGCCCAAGGAG.......................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGACGACGAAGAGAGCTCGCT....... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACGAAGAGAGCTCGCTGCCCC.. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGCGACGAAGAGAGCTCGCTGC..... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AGGAGACGACGAAGAGAGCT........... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGCATTTGATGCCCAAGGAGA......................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCTTGCATTTGATGCCCAAGGA........................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AAAAAGAAAAACGTCACGTTCT....................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GAGACGACGAGGAGAGCTCGCT....... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTGCATTTGATGCCCAAGGAGA......................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................GAAAAGAAAGAAAAGAAGAGAAAGA............................................................................................................................ 25 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................GTCAAGAAAGAAAAGAAAAGAA............................................................................................................................... 22 2 4 0.50 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................GCTCTGTTAGTACTATACCTT........................................................ 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................AAAAAGAAAAACGTCACGTT......................................................................................................................................................................................................... 20 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................AACCAGAAATAAAGAAACCAAAGA.......................................................................................................................................... 24 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................GGAGACGTCGGAGAGAGC............ 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AAAAGAAAGAAAAGAAGAGAA............................................................................................................................... 21 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................AAAGAAAGAAAAGAAGAGAA............................................................................................................................... 20 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GATAGATACAGCATGCAAAAAA........................................................................................................................................................................................................................ 22 3 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGATGCCGAAGGAGAGGA...................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................CAAGAAAGAAAAGAAAAGA................................................................................................................................ 19 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................AAAAAAGAAAAGAAAGAAAA....................................................................................................................................... 20 0 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................AAGAAAGAAAAGAAAAGAAAAC............................................................................................................................ 22 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................CTAGGAGGCGACGAAG................. 16 2 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0
.................................................................................................................................................................................................................GTTGATGCCGAAGGAGAGGA...................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................ATAAAAAAAGAAAAGAAAGGAAAGTA.................................................................................................................................... 26 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................CGTCAAGAAAGAAAAGAAAAGAAA.............................................................................................................................. 24 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................AAAAGACGAGAAAAAGAAAAAA..................................................................................................................... 22 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GTTCCTTTAGCTCAGTTGGT.................................................................. 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................AAAAAAAAAAAACTTCACG........................................................................................................................................................................................................... 19 1 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................AGAAAAGAAGGAAAAGAAA................................................................................................................................... 19 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................AAAGAAAAGAAGGAAAAGAA.................................................................................................................................... 20 1 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................AAAAGAAAGAAAAGAAGAG................................................................................................................................. 19 1 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................CAAAAAGGAAAAGAAAGATAAGA..................................................................................................................................... 23 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................GAAGGAAAAGAAAGAAAAGA..................................................................................................................................... 20 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAAACGTTCTTTACTGTCTCTGTTGTACGTTTTTTTTTTTTGCAGTGCAAGTTGGCAATTTCGCGGGCAATTTTTCGTTTAACGTCGATTTGGTCTTTTTTTCTTTTCTTTCTTTTCTTTTCTTTTTCTTTTTTCATCTTAACAAGGACAAGACAGCTAACAGTACAAGGAAATCGACACAATCAAAATATGGAATTTGTCACGAACGTAAACTACGGGTTCCTCTGCTGCTTCTCTCGAGCGACGGGGTA
*********************************************************************************.........................(((...((......((((((.......)))))).......))...))).************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060662
9x160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060675
140x9_ovaries_total
 SRR060655
9x160_testes_total
 SRR060667
160_females_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
.......................................................................................................................................................................................................................CGGGTTCCTCTGCTGCTTCTC............... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGGGTTCCTCCGCTGCTC.................. 18 2 4 0.25 1 0 1 0 0 0 0 0 0
.........................................GTAGTGCTAGTGGGCAATT............................................................................................................................................................................................... 19 3 4 0.25 1 0 0 1 0 0 0 0 0
...............................................................................................................................................................TCAGTACAAGGACATCGA.......................................................................... 18 2 7 0.14 1 0 0 0 1 0 0 0 0
........................................TGCAGTGTACGTTGGCAGT................................................................................................................................................................................................ 19 3 15 0.13 2 0 0 0 0 2 0 0 0
..........................................................................................................TCTTTCTTTTCTTTTCTTTG............................................................................................................................. 20 1 9 0.11 1 0 0 0 0 0 1 0 0
.........................................................................................................................................ATTAACTAGGACTAGACAG............................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
...............................................................................TAACTTCCATTTGGTCTTCT........................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13042:530713-530963 - dvi_14160 T-----------------TTTGCAAGAAATGACAGAGACAACA-TGCAAAA----------------------------AAAAAAAACGTCACGTTCAACCGTTAAAGCGCCCGTT------------A-------------------------------------------------------------------------------------------------AA------AAGCAAATTGCAGCTAAACCAGAA-A----------------AAAAGAAAAGAAAG----------A-AAAGAAA-AG---------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---------AGAAAA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTTTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCCCCAT
droMoj3 scaffold_6308:622087-622321 + T-----------------TTTGCAAGCAA-GACAGAGACAACAATGCAA-----------------------------------------------------------------------------ATTAA-AGTAAA--------------------AA-----------------------AAAAT-------------------------------------------------------------------------------GA-AAAAAT-----CTGA----------------A------A-AGCAGCTGAATAACACCAAAATCGAGA-------------------------------------------------------------------------------------------------------------------------------TC----------------------------AAGAAAACGAAACAATCC--AAATACAAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTTTAGCTGTGTTAGTTTTATACATTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCACAT
droGri2 scaffold_15203:5850796-5851080 - T-----------------TTTGCTAGAAT-GACAGAGACAACA-AGCAAAAACCAAATATACGAGAAACTATATGTGTAAAAAGAAACGCCACGAATAACCGTTAAAGCGCCCGTT------------ATA-AGA-----------------------------------AAAAAAGAAACTA---------------------------------------------------AAACAAAATGCAGCTA------------------------------------------------------AGAAA-AG---------AA-----------------------AAA-AGAAAGTCAA--------------------------------------------------------------------------------------------------------TC----------------------------AAAA--------ACTAAA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACATTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCACAT
droWil2 scf2_1100000004909:3719480-3719653 + C-----------------GTT-----------------------------------------------------------------------------------AAT--------------GCG-----------------------------------------------------------AAAAT----------GGAA------GCAAAACTTACT---------------------------------------------ATG--------------------------------A-AATGAAAGAGC-----------------ATTAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCCCAT
dp5 XL_group1e:7159907-7160123 + T-----------------TAT----------------------------------------------------------------------------------------------------GCGG-TTTC-----CGAG-CAAAAGAAAAACGACGAATGAAT-----------------------------AAAAGA--AGACAAATAC------GAAT---------------------------------------------AAGAAAAAAAT-----CTAA----------------G------A-AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAATGAAGCGGTGA--AG----ATGTAGAATTGTTCCTGTTCTGTCGATTGTCAAATTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCCCT-ACCCCAT
droPer2 scaffold_13:1393743-1393958 - T-----------------TAT----------------------------------------------------------------------------------------------------GCGG-TTTCCTAGCAAAA-G-----AAAAACGACGAATGAAT-----------------------------AAAAGA--AGACAAATAC------GAAT---------------------------------------------AAGA-AAAAAT-----CTAA----------------G------A-AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAATGAAGCGATGA--AG----ATGTAGAATTGTTCCTGTTCTGTCGATTGTCATATTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCCCT-ACCCCAT
droAna3 scaffold_13417:1684108-1684346 + T-----------------T------------------------------------------------------------------------------------------------------GCAG-TCTCTAAGCCAAG-------------------CGAAGACGA-----AGAAGAACGCAAAAAT----------GAAA------AC------GAAT---------------------------------------------ATG--------------------------------AAAATGAAA-AG---------AAAACGAAAATCAAGAATAAGAATCAGA-AGAAAGTCAT--------------------------------------------------------------------------------------------------------TG----------------------------AAGA--------AACCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCACGTTCCTCTAGCTGTGTTAGTTTTATACCTTAAAACAGTGCTTGCATTTGATGGCCCAAGGAGACGACGAAGAGAGCTCGCTTGC-CAAC
droBip1 scf7180000396621:188545-188783 - C-----------------TCT------------------------------------------------------------------------------------------------AA--GCAG-TCCCTAAGCCAAG-CAA--------------ACGAAGACGA-----AGAAGAACGCAAAA-TA------C--GAAT------AC------GAAT---------------------------------------------ACG--------------------------------A-AATGAAA-AGC---------------AAATCAAGAATAAGAGTCACA-CCAAAGTCAA--------------------------------------------------------------------------------------------------------TG----------------------------AAGA--------ATCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCACGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCACAC
droKik1 scf7180000302395:568469-568728 - CAAAGGTCAC-AGAAAT-TTT----------------------------------------------------------------------------------------------------GCAG-TTTCA-AGTCAAATCAA-------------AACGCAGCCAA-----AGAAGAACGCAAAA-AAAAAAAAC--GAA-------AC-------------------------------------------------------------------------------GAATCGAATCGA-AAAGAAA-AG---------A--------------------------------AATCAA--------------------------------------------------------------------------------------------------------TCAACCCAAACTCAAATTGA--------TGAAG---------AGCCGAAAAA----AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCGCAT
droFic1 scf7180000453829:502653-502817 - AAA----AAAAAA----A--------------------------------------------------------------------------------------------------AAATTACAG-ATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCG-AATCAA--------------------------------------------------------------------------------------------------------TT----------------------------AAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAAT
droEle1 scf7180000491272:1150771-1150965 - ------------------------------------------------------------------------------------------------------------------------------------------G-CAA-------------ATCGAAGACGA-----AGAAGAACGCAAAA-TGAAAACAAGA--AA------AA------GAATCAACTCAA------ACTCAAACTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAAC
droRho1 scf7180000779616:60753-60963 + A-----------------GA------------------------------------------------------------------------------------------------AAATTGCAG-TTCCT-AGCCATG-CAA-------------AACGAAGACGA-----AGAAGAACGCAAAA-GAAAAAAAA--GAAA------AA------TAATCAACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTC-----------------AAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAAC
droBia1 scf7180000302126:2848072-2848352 - T-----------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCAAAA-------------------------------------------------------------------------------GAGATCAAA----------------------------------------------------------------------------------TGAA-----CTAGAATGAACTCAAAAGAGATCAAATGAACTAGAATGAACTCAAAAGAGATCAAATGAACTAGGATGAACTCAAAAGATTCCAAATGAACTAAAAAAATGAAATCAAACTCGAATCGAATCCATAACAAAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAAC
droTak1 scf7180000415248:220569-220798 + T------------------------------------------------------------------------------------------------------------------------GCAG-TTCCT-TGCCAAG-CAA-------------AACGAAGACGA-----AGAAGAACGCAAAA-A----------GAAA------AC------GAATCAACTCAAAAACCAAATCAAACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTCGAATCGAATCAATT-TAAAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAAC
droEug1 scf7180000409230:294652-294876 + A-----------------TA----------------------------------------------------------------------------------------------------------------------------------ACGAAAAATGAAAAAGAAAAAAAGAAGAAAGTAAAA------------GA--------------------------------------------------------------------------------------------------------------------------------AAATCAAGATCA-------AAAT--ATGATATTGAAT----------C----------------------------------------------------------------------------------------TCAACTCAAACTTGAATCGAATTAA---TAACG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCCGAAC
dm3 chrX:20101642-20101840 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAACGCGTAA-T----------GATA------AC--------------------------------TTAATCTAAACT------CAAATAAGTTCAAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAAC
droSim2 x:18905863-18906112 - dsi_13807 T----GTCTC-AG----A--------------------------------------------------------------------------------------------------CAATTGCAG-TTCCT-AGCCAAG-CAA--------------ACGAAGACGA-----AGAAGAACGCGTAA-T----------GATA------AC--------------------------------TCAATCTAAACTGAAATTCAAATAAGTTCAAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAAC
droSec2 scaffold_8:2296598-2296717 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAAC
droYak3 X:19340563-19340831 - T----GTCTC-AA----A--------------------------------------------------------------------------------------------------AAATTGCAG-TTCCT-TGCCAAG-CAA-------------AACGAAGACGA-----AGAAGAACGCATAA-T----------GAAA------AC------GAATCAACTCGA------AATCAAACTCAATATAAACT------CAAATCAATTTAA-ATCAAATC-------GAATCGAATCGA-AT-----------------------------------------------AG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCCCT-GCAGAAC
droEre2 scaffold_4690:10196026-10196276 - T-----------------TTC-----------------------------------------------------------------------------------------------------CTTGTTCCT-AGCCAAG-CAA-----A------AAGCGAGGACGA-----AGAAGAACGCATAA-A----------GAAA------AC------GAATCGACTCAA------AATCAAAGTCAATCTAAACTAAAA-T----------------CAAATCAAA--TCGAATCG-----A-AT-----------------------------------------------AG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
T-----------------TTTGCAAGAAATGACAGAGACAACA-TGCAAAA----------------------------AAAAAAAACGTCACGTTCAACCGTTAAAGCGCCCGTT------------A-------------------------------------------------------------------------------------------------AA------AAGCAAATTGCAGCTAAACCAGAA-A----------------AAAAGAAAAGAAAG----------A-AAAGAAA-AG---------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---------AGAAAA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTTTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCCCCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGAAGAGAGCTCGCT-.......2011.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGTTCTGTCGATTGTCATGTTCC....................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGACGACGAAGA.................2711.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGCATTTGATG-CCCAAGGAG...........................2511.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACGAAGAGAGCTCGCT-.......2111.001000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGAGAGCTCGCT-GCCCC..2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGACGACGAAGAGAGCT............2011.001000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTGATG-CCCAAGGAGA..........................2111.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCATTTGATG-CCCAAGGA............................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCATTTGATG-CCCAAGGAGA..........................2211.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................A-A----------------AAAAGAAAAGAAAG----------A-AAA.................................................................................................................................................................................................................................................................................................................................................20100.101000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AAGAAAG----------A-AAAGAAA-AG---------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA---------C.......................................................................................................................................22100.101000000000000000000010000000000000000000000000000000000000000000
droMoj3
T-----------------TTTGCAAGCAA-GACAGAGACAACAATGCAA-----------------------------------------------------------------------------ATTAA-AGTAAA--------------------AA-----------------------AAAAT-------------------------------------------------------------------------------GA-AAAAAT-----CTGA----------------A------A-AGCAGCTGAATAACACCAAAATCGAGA-------------------------------------------------------------------------------------------------------------------------------TC----------------------------AAGAAAACGAAACAATCC--AAATACAAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTTTAGCTGTGTTAGTTTTATACATTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCACATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CCCAAGGAGATGACGAAGAGAGCTCGC.........2811.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAGAGAGCTCGCT-GC.....2211.001000001
droGri2
T-----------------TTTGCTAGAAT-GACAGAGACAACA-AGCAAAAACCAAATATACGAGAAACTATATGTGTAAAAAGAAACGCCACGAATAACCGTTAAAGCGCCCGTT------------ATA-AGA-----------------------------------AAAAAAGAAACTA---------------------------------------------------AAACAAAATGCAGCTA------------------------------------------------------AGAAA-AG---------AA-----------------------AAA-AGAAAGTCAA--------------------------------------------------------------------------------------------------------TC----------------------------AAAA--------ACTAAA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACATTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCACATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGATGACGAAGAGA...............1811.00110
droWil2
C-----------------GTT-----------------------------------------------------------------------------------AAT--------------GCG-----------------------------------------------------------AAAAT----------GGAA------GCAAAACTTACT---------------------------------------------ATG--------------------------------A-AATGAAAGAGC-----------------ATTAAGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCCCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAGAGAGCTCGCT-GCCCC..2512.00210100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGAT.........................1912.00200020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGATGACGAA...................2511.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATGACGAAGAGAGCT............1911.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGATGACGAAGAGAGCTCG..........2211.00110000
.........................................................................................................................GCG-----------------------------------------------------------AAAAT----------GGAA------GCAAAACTTACT---------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-CCCAAGGAGATGACGAAG..................2211.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAGAGAGCTCGCT-.......2011.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAGAGAGCTCGC.........1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-CCCAAGGAGATGACGAAGAGA...............2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGACGAAGAGAGCT............1811.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATGTTCCTCTAGCTGTGTTA.......................................................................2411.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-CCCAAGGAGATGACGAAGA.................2311.00100100
dp5
T-----------------TAT----------------------------------------------------------------------------------------------------GCGG-TTTC-----CGAG-CAAAAGAAAAACGACGAATGAAT-----------------------------AAAAGA--AGACAAATAC------GAAT---------------------------------------------AAGAAAAAAAT-----CTAA----------------G------A-AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAATGAAGCGGTGA--AG----ATGTAGAATTGTTCCTGTTCTGTCGATTGTCAAATTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCCCT-ACCCCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGATGACGAAG..................2612.0020000000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAGAGCTCCCT-ACCCC..2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAGAGAGCTCCCT-AC.....2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTCCTGTTCTGTCGATT..............................................................................................2111.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATG-CCCAAGGAGATGACGAAGAG................2611.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAGAGAGCTCCCT-.......2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTGATG-CCCAAGGAGAT.........................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-CCCAAGGAGATGACGAAGAGA...............2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGAAGAGAGCTCCCT-.......1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCCTGTTCTGTCGATT..............................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGA--AG----ATGTAGAATTGT..............................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGATGACGAAGAG................2811.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGACGAAGAGAGCTCCC.........2111.0011000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACCTTA-AACAGTGCTTG..............................................2111.0010100000000
droPer2
T-----------------TAT----------------------------------------------------------------------------------------------------GCGG-TTTCCTAGCAAAA-G-----AAAAACGACGAATGAAT-----------------------------AAAAGA--AGACAAATAC------GAAT---------------------------------------------AAGA-AAAAAT-----CTAA----------------G------A-AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAATGAAGCGATGA--AG----ATGTAGAATTGTTCCTGTTCTGTCGATTGTCATATTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCCCT-ACCCCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAAGCGATGA--AG----ATGTAGAATTGTT.............................................................................................................2812.002200000
.........................................................................................................................................................................................................................................................................................CTAA----------------G------A-AG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAATGAAGCG......................................................................................................................................2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAAGAGAGCTCCCT-ACCCC..2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACGAAGAGAGCTCCCT-ACCCC..2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACGAAGAGAGCTCCCT-ACC....2411.001010000
droAna3
T-----------------T------------------------------------------------------------------------------------------------------GCAG-TCTCTAAGCCAAG-------------------CGAAGACGA-----AGAAGAACGCAAAAAT----------GAAA------AC------GAAT---------------------------------------------ATG--------------------------------AAAATGAAA-AG---------AAAACGAAAATCAAGAATAAGAATCAGA-AGAAAGTCAT--------------------------------------------------------------------------------------------------------TG----------------------------AAGA--------AACCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCACGTTCCTCTAGCTGTGTTAGTTTTATACCTTAAAACAGTGCTTGCATTTGATGGCCCAAGGAGACGACGAAGAGAGCTCGCTTGC-CAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................AGTCAT--------------------------------------------------------------------------------------------------------TG----------------------------AAGA--------AACCGA--------AAGTAGAATT................................................................................................................2811.001000010
...............................................................................................................................................................GAAGACGA-----AGAAGAACGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
droBip1
C-----------------TCT------------------------------------------------------------------------------------------------AA--GCAG-TCCCTAAGCCAAG-CAA--------------ACGAAGACGA-----AGAAGAACGCAAAA-TA------C--GAAT------AC------GAAT---------------------------------------------ACG--------------------------------A-AATGAAA-AGC---------------AAATCAAGAATAAGAGTCACA-CCAAAGTCAA--------------------------------------------------------------------------------------------------------TG----------------------------AAGA--------ATCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCACGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCACACSizeHit CountTotal NormTotal
No Reads
droKik1
CAAAGGTCAC-AGAAAT-TTT----------------------------------------------------------------------------------------------------GCAG-TTTCA-AGTCAAATCAA-------------AACGCAGCCAA-----AGAAGAACGCAAAA-AAAAAAAAC--GAA-------AC-------------------------------------------------------------------------------GAATCGAATCGA-AAAGAAA-AG---------A--------------------------------AATCAA--------------------------------------------------------------------------------------------------------TCAACCCAAACTCAAATTGA--------TGAAG---------AGCCGAAAAA----AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGATGACGAAGAGAGCTCGCT-GCCGCATSizeHit CountTotal NormTotal
No Reads
droFic1
AAA----AAAAAA----A--------------------------------------------------------------------------------------------------AAATTACAG-ATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCG-AATCAA--------------------------------------------------------------------------------------------------------TT----------------------------AAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAATSizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------------------------------------------------------------------------------------------------------G-CAA-------------ATCGAAGACGA-----AGAAGAACGCAAAA-TGAAAACAAGA--AA------AA------GAATCAACTCAA------ACTCAAACTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAACSizeHit CountTotal NormTotal
No Reads
droRho1
A-----------------GA------------------------------------------------------------------------------------------------AAATTGCAG-TTCCT-AGCCATG-CAA-------------AACGAAGACGA-----AGAAGAACGCAAAA-GAAAAAAAA--GAAA------AA------TAATCAACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTC-----------------AAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAACSizeHit CountTotal NormTotal
No Reads
droBia1
T-----------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCAAAA-------------------------------------------------------------------------------GAGATCAAA----------------------------------------------------------------------------------TGAA-----CTAGAATGAACTCAAAAGAGATCAAATGAACTAGAATGAACTCAAAAGAGATCAAATGAACTAGGATGAACTCAAAAGATTCCAAATGAACTAAAAAAATGAAATCAAACTCGAATCGAATCCATAACAAAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAACSizeHit CountTotal NormTotal
No Reads
droTak1
T------------------------------------------------------------------------------------------------------------------------GCAG-TTCCT-TGCCAAG-CAA-------------AACGAAGACGA-----AGAAGAACGCAAAA-A----------GAAA------AC------GAATCAACTCAAAAACCAAATCAAACTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTCGAATCGAATCAATT-TAAAG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCAGAACSizeHit CountTotal NormTotal
No Reads
droEug1
A-----------------TA----------------------------------------------------------------------------------------------------------------------------------ACGAAAAATGAAAAAGAAAAAAAGAAGAAAGTAAAA------------GA--------------------------------------------------------------------------------------------------------------------------------AAATCAAGATCA-------AAAT--ATGATATTGAAT----------C----------------------------------------------------------------------------------------TCAACTCAAACTTGAATCGAATTAA---TAACG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCGCT-GCCGAACSizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAACGCGTAA-T----------GATA------AC--------------------------------TTAATCTAAACT------CAAATAAGTTCAAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATG-CCCAAGGAGACGAC......................2153.80190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000100000000000001000000000100000001100000000000000000000000000000000001000000000000400000000000000000000011000000400000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCATGTTCCTCTAGCTGT...........................................................................2153.40170000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000001200000000000000000000000000000300000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGACGACGAAGAGAGC.............2152.40120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000110000000000000000000000000000000000000000020000000000000000000000000000000000000000000100000000000000000000000000000000000300000000000000000000000000000300000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTCCTGTTCTGTCGATT..............................................................................................2152.20110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000400000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTCGATTGTCATGTTCC....................................................................................2152.00100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000001000201000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-CCCAAGGAGACGACGAAGAGAGC.............2552.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000510000000000000000000000000
....................................................................................................................................................................................................................................................................................................TCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGC.....................................................................................................................................2151.6080000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000200000000000000000000000000000000000000000000000100000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGTTCTGTCGATTGTC...........................................................................................2151.6080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCTGTCGATTGTCATGT.......................................................................................2151.6080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000002000200000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTTCCTCTAGCTGTGTT........................................................................2151.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000100000000000000000000000000000200000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATG-CCCAAGGAGACGACGAAGA.................2451.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTGATG-CCCAAGGAGACGACGAA...................2851.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-CCCAAGGAGACGACGAAGA.................2151.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000000000000000200000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCCTCTAGCTGTGTTAG......................................................................2151.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGACGACGAAGAGAGCT............2151.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGAGAGCTCACT-GCAGA..2151.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGACGACGAAGAGAGCTC...........2151.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000200000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTCCTGTTCTGTCGAT...............................................................................................2151.4070000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000300000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGTTCCTCTAGCTGTGT.........................................................................2151.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000030000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTCGATTGTCATGTTCC....................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTGCTTGCATTTGATG-....................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAGGAGACGACGAAGAGAGCTCAC.........2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGATG-CCCAAGGAGAC.........................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTAGAATTGTTCCTGTTC......................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTGTCATGTTCCTCTA................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGAGCTCACT-GCAGAA.2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAG....................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTCCTGTTCTGTCGATTGT............................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATTGTTCCTGTTCTGTCGATTG.............................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGCATTTGATG-CCCAAGG.............................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GAATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------A.......................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGAAGAGAGCTCACT-GCAGAAA2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------AGCCGA--------AAGTAGAATTGTTCCTGT........................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACGAAGAGAGCTCACT-GCA....2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACGAAGAGAGCTCACT-GCAGAA.2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................G-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAA..................................................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------TC..................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CCCAAGGAGACGACGAAGAG................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................C-----CAAA--TCGAATCAG------A-----------------------------------------------TCG-AAT.............................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------AGCCGA--------AAGTAGAATTGTTCCTGT........................................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAG.......................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CAAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------TCG-................................................................................................................................................................................................................................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------AAGTAGAATTGTTCCTGTTCT.....................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAG.......................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTCGATTGTCATGTTCCTCTAG...............................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCG...................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTTCTGTCGATTGTCATG........................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATG-CCCAAGGAGACGACGAA...................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGTTCCTCTAGCTGT...........................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAGGAGACGACGAAGAGAGCTCACT-.......2850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-CCCAAGGAGACGACGAAGAGA...............2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATACCTTA-AACAGTGCTTGCATTTGAC......................................2950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTGCATTTGATG-CCCAAGGAG...........................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATTGTCATGTTCCTCTAGC..............................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-CCCAAGGAGACGACGAAG..................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGACGACGAAGAGAGCTA...........2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGAAGAGAGCTCACT-GCA....2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................ATAAGTTCAAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------....................................................................................................................................................................................................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................CGAATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------A..................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GAATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------TAA.....................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCCTGTTCTGTCGATTGTCATG........................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTGATG-CCCAAGGAGACGACGA....................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGAGACGACGAAGAGAG..............2150.2010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATG-CCCAAGGAGACGACGAAGAGAG..............2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGAGACGACGAAGAG................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTT.............................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTTCCTCTAGCTGTGTTAGTTT...................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATG-CCCAAGGAGACGAA......................2150.2010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACGAAGAGAGCTCAC.........2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTCCTGTTCTGTCGATTG.............................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGAGACGACGAAGAGAGC.............2250.2010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AG......................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-CCCAAGGAGACGACGAA...................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATG-CCCAAGGAGACGA.......................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGAGAGCTCACT-G......1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGCATTTGATG-CCCAAGGAG...........................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTATACCTTA-AACAGTGC.................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CCCAAGGAGACGACGAAGAGAG..............2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................TTCAAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------TCG-................................................................................................................................................................................................................................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCATTTGATG-CCCAAGGAGACGAC......................2850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATTGTCATGTTCCTCTA................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTA.....................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGTTCCTCTAGCTGTGTTAGT.....................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGA--------AAGTAGAATTGTTCCTGTTC......................................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTGATG-CCCAAGGAGA..........................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGATG-CCCAAGGAGACGACGAA...................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGTCATGTTCCTCTAGCTG............................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGTTCTGTCGATTGTCATGTTCCTC..................................................................................2850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTCGATTGTCATGTT......................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGACGACGAAGAGAGCTCACT-G......2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGACGAATC....................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACGAAGAGAGCTCACT-GCAG...2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-CCCAAGGAGACGACGAAGAC................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGTTCAAAAC-----CAAA--TCGAATC............................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAG....................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGTTCTGTCGATTGTCAT.........................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATGTTCCTCTAGCTGTGTTAGT.....................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTC............................................................................................................2850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGACGAAGAGAGCTCACT-.......2250.2010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T----GTCTC-AG----A--------------------------------------------------------------------------------------------------CAATTGCAG-TTCCT-AGCCAAG-CAA--------------ACGAAGACGA-----AGAAGAACGCGTAA-T----------GATA------AC--------------------------------TCAATCTAAACTGAAATTCAAATAAGTTCAAAAC-----CAAA--TCGAATCAG------A-----------------------------------------------TCG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAGAGCTCACT-GCAGAAC2212.00220000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGACGAAGAGAGCT............1811.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAGAGAGCTCACT-GC.....2011.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTCCTGTTCTGTCGATG..............................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-CCCAAGGAGACGACGAAG..................2011.00100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTTCCTCTAGCTGTGTTAGT.....................................................................2311.00100000001000000000
droSec2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTGCATTTGATG-CCCAAGGAG...........................2611.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGAGACGACGAAGAGAGC.............2211.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGAC.........................1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACGAAGAGAGCTCACT-GCA....2411.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCATTTGATG-CCCAAGGAGACGACG.....................2711.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATG-CCCAAGGAGACGA.......................1911.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGAAGAGAGCTCA..........1811.0011000
droYak3
T----GTCTC-AA----A--------------------------------------------------------------------------------------------------AAATTGCAG-TTCCT-TGCCAAG-CAA-------------AACGAAGACGA-----AGAAGAACGCATAA-T----------GAAA------AC------GAATCAACTCGA------AATCAAACTCAATATAAACT------CAAATCAATTTAA-ATCAAATC-------GAATCGAATCGA-AT-----------------------------------------------AG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCCCT-GCAGAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATG-CCCAAGGAGACGACGAAGA.................2712.00200000110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACGAAGAGAGCTCCCT-GCAGAAC2812.00200000020000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGCATTTGATG-CCCAAGGAG...........................2512.00200000110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGCATTTGATG-CCCAAGGA............................2411.00101000000000
..........................................................................................................................................G-CAA-------------AACGAAGACGA-----AGAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGAAGAGAGCTCCCT-GCAGAA.2611.00100000000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGAAGAGAGCTCCC.........1911.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGAAGAGAGCTCCCT-GC.....2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATT................................................................................................................2111.00100000010000
.............................................................................................................................................................................................................................................CAAACTCAATATAAACT------CAAATCA.......................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droEre2
T-----------------TTC-----------------------------------------------------------------------------------------------------CTTGTTCCT-AGCCAAG-CAA-----A------AAGCGAGGACGA-----AGAAGAACGCATAA-A----------GAAA------AC------GAATCGACTCAA------AATCAAAGTCAATCTAAACTAAAA-T----------------CAAATCAAA--TCGAATCG-----A-AT-----------------------------------------------AG-AATCAA--------------------------------------------------------------------------------------------------------TC-----------------------------AG---------AGCCGA--------AAGTAGAATTGTTCCTGTTCTGTCGATTGTCATGTTCCTCTAGCTGTGTTAGTTTTATACCTTA-AACAGTGCTTGCATTTGATG-CCCAAGGAGACGACGAAGAGAGCTCACT-GCAGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-CCCAAGGAGACGACGAAGAGA...............2512.0020000200
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATG-CCCAAGGAGACGACGAAG..................2311.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATG-CCCAAGGAGACGACGAAGA.................2611.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGCATTTGATG-CCCAAGGAG...........................2511.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGAGAGCTCACT-GCA....2011.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAAGAGAGCTCACT-GCAGAAC2411.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CCCAAGGAGACGACGAAGA.................2011.0010000100
........................................................................................................................................................................................................................GAATCGACTCAA------AATCAAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000

Generated: 05/16/2015 at 09:06 PM