ID:

dvi_14102

 Coordinate:

scaffold_13036:1090755-1090905 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.3 -18.1 -17.8

Flybase annnotation

CDS [Dvir\GJ14664-cds]; exon [dvir_GLEANR_14810:1]; intron [Dvir\GJ14664-in]

Repeatable elements

NameClassFamilyStrand
Hoyak1DNAhAT-hobo-

Sense Strand Reads

-------------------------#########################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACTTGTTATTGCTATTTATTTGACAATGGGGATACCGAGTATTTTTGAATGTATGTAATAGAGAGCTGCATGAATGAAAAAAAAAAAACATTCTAATGAACAATGCCAGAAATGAGTTAAGTGAAATTGAATGCAAAGACGAATATGTTTGAAAGTGTAGTGCGGCCACGTAGAACTGGGACGAACAAGAAAGAAAACGAATTTAATGAGTGGTAATGCGATGGAATAAGAGGTTTTGTTTCGAATGCATT
**************************************************.((((((.........))))))................(((((.(((..((...((((....)).))...))...))))))))............((((((.....((..((((....))))..)).....))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 V116
male body		 M028
head
 SRR060684
140x9_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 M047
female body
 SRR060668
160x9_males_carcasses_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 M061
embryo
 SRR060660
Argentina_ovaries_total
 V047
embryo
 SRR060675
140x9_ovaries_total
 V053
head
 SRR1106730
embryo_16-30h
 SRR060658
140_ovaries_total
 SRR060657
140_testes_total
 SRR060689
160x9_testes_total
 SRR060678
9x140_testes_total
 SRR1106714
embryo_2-4h
 SRR060683
160_testes_total
 SRR060670
9_testes_total
 SRR060681
Argx9_testes_total
 SRR060680
 9xArg_testes_total
 SRR1106716
embryo_4-6h
 SRR060676
9xArg_ovaries_total
 SRR1106713
embryo_0-2h
 SRR1106718
embryo_6-8h
 SRR060655
9x160_testes_total
 SRR060656
9x160_ovaries_total
 SRR060673
9_ovaries_total
 SRR1106712
embryo_0-2h
 SRR1106715
embryo_4-6h
 SRR060677
Argx9_ovaries_total
 SRR1106717
embryo_6-8h
 SRR1106726
embryo_14-16h
 SRR060674
9x140_ovaries_total
 SRR1106719
embryo_8-10h
 SRR1106722
embryo_10-12h
 SRR1106728
larvae
 GSM1528803
follicle cells		 SRR1106729
mixed whole adult body
...........................................................................................................................................................................AGAACTGGTACGGACAAG.............................................................. 18 2 2 407.50 815 364 16 93 34 41 30 28 12 25 13 17 12 12 6 13 13 8 10 12 7 10 5 3 5 1 3 2 5 2 0 1 1 2 3 1 1 0 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGTACGGACAAG.............................................................. 21 3 1 356.00 356 143 69 38 14 11 13 7 6 7 1 6 4 4 1 7 3 3 3 5 3 1 2 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAGG............................................................. 20 3 2 233.00 466 78 200 13 27 11 19 8 19 4 13 0 11 4 18 4 12 2 0 2 4 5 3 0 1 2 3 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGTACGGACAAG.............................................................. 22 3 1 196.00 196 74 27 20 6 6 10 7 4 4 4 4 5 4 1 3 3 1 2 2 2 2 0 2 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAG.............................................................. 19 2 2 168.00 336 134 48 38 22 18 12 7 7 6 4 4 3 2 5 1 1 2 3 1 1 6 2 1 1 1 1 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGGACAAGG............................................................. 19 3 14 87.29 1222 137 551 25 52 29 44 44 21 11 68 5 27 21 57 17 28 0 2 4 4 30 5 7 6 2 2 7 0 8 3 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................TTAGAACTGGTACGGACAAG.............................................................. 20 3 5 80.00 400 135 77 43 22 15 22 10 12 6 9 4 1 2 3 7 3 4 7 3 7 1 1 0 0 1 0 1 1 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGTACGGACAA............................................................... 20 3 4 70.75 283 49 34 17 26 30 25 10 11 9 5 8 4 9 0 4 3 9 9 3 6 0 1 1 1 0 3 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGTACGGACA................................................................ 20 3 4 63.25 253 81 30 31 5 15 16 7 7 11 4 3 5 1 7 2 1 9 3 5 4 1 0 0 0 0 1 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAA............................................................... 18 2 4 51.75 207 52 1 16 24 17 13 20 2 5 0 6 5 10 3 10 1 5 5 2 2 3 1 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGTACGGAC................................................................. 19 3 14 51.36 719 261 35 121 31 36 34 24 13 10 16 17 14 11 15 12 5 1 7 9 3 6 4 2 6 1 5 2 0 7 1 1 2 0 0 0 3 0 0 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGTACGGACA................................................................ 19 3 8 50.75 406 133 36 49 31 20 22 9 16 6 11 8 7 11 4 5 2 8 2 5 2 4 3 1 0 0 2 1 0 2 1 0 0 0 0 0 1 1 0 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGTACGGACAA............................................................... 21 3 3 40.67 122 15 13 8 11 20 13 9 0 8 1 4 0 3 1 1 0 7 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTAGAACTGGTACGGACAA............................................................... 19 3 20 14.00 280 39 23 10 24 23 32 17 0 16 9 18 8 10 3 8 3 7 4 2 11 0 1 1 0 0 0 2 0 1 0 4 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0
.......................................................................................................................................................................ACTTAGAACTGGTACGGA.................................................................. 18 3 20 4.95 99 0 0 0 0 0 0 26 0 0 0 29 0 0 0 0 0 0 12 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGTACGGACAAG.............................................................. 17 2 9 4.22 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 9 0 0 0 0 1 0 2 2 0 0 0 4 4 0 2 0 0 1 1 1 0 0
..........................................................................................................................................................................TAGAACTGGGACGGACAAGG............................................................. 20 2 1 4.00 4 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGAACAAGG............................................................. 19 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGGACAAGA............................................................. 19 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGGACGGACAAGG............................................................. 19 2 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGGACAAGGA............................................................ 20 3 3 2.00 6 1 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGGACGGACAAGGG............................................................ 21 3 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGGACGGACAAG.............................................................. 19 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................ATGTTTGAAAGTGTAGTGC........................................................................................ 19 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAGGAA........................................................... 22 3 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGGACAAGAG............................................................ 20 3 2 2.00 4 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATTGAACAATGCCACAAATG......................................................................................................................................... 21 2 2 1.50 3 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ATTGGACAATGGGGAAACC....................................................................................................................................................................................................................... 19 2 3 1.33 4 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTAGAACTGGGACGGACAAG.............................................................. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGCACAAGG............................................................. 20 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAGAG............................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AACGTAGAACTGGTACGGACAAG.............................................................. 23 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGGACGGACAAG.............................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CGTAGAACTGGTACGGACAAG.............................................................. 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAGA............................................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAGGA............................................................ 21 3 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GGTAATGCGATGGAATCAGAGGT................. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGTACGGACAAGA............................................................. 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CAACGTAGAACTGGTACGGA.................................................................. 20 3 5 1.00 5 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGCACGGACAAG.............................................................. 21 3 2 1.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AACGTAGAACTGGTACGGACA................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGGACGGACAAG.............................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATGGAAGAAGACGTTTTGGTT.......... 21 3 3 1.00 3 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGCACGGACAAG.............................................................. 19 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................AAAAAAAAACATTCTGATGGAC...................................................................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGAACGGACAAG.............................................................. 21 3 3 1.00 3 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTAGAACTGGTACGAACAAGG............................................................. 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGGACGGACAAGG............................................................. 18 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTGAAAGTGTAGTGCGGCCACGTAG.............................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGTACGGACAAGA............................................................. 18 2 2 1.00 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAGAA............................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CGTAGAACTGGTACGGACAAGG............................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGTACGAACAA............................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGTACGAACAAGG............................................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GTAGAACTGGTACGGACAAGG............................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGGACGGACA................................................................ 20 2 2 1.00 2 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CACTTAGAACTGGTACGGACA................................................................ 21 3 2 1.00 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CACTTAGAACTGGTACGGAC................................................................. 20 3 5 0.60 3 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGTACGTACA................................................................ 20 3 4 0.50 2 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGCACAAGG............................................................. 19 3 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CAGCTGCATTAATGAAAAAAA........................................................................................................................................................................ 21 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TTAGAACTGGGACGGACAA............................................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATATTGGACAATGGGGAAACC....................................................................................................................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CAGCTGCATTAATGAAAAAA......................................................................................................................................................................... 20 2 4 0.50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACCTAGAACTGGTACGGACAAG.............................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGTACGGACAAGAG............................................................ 19 3 14 0.43 6 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................ATTCTCGTGAACAATGCCGGA............................................................................................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAGAT............................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGAACAAGGG............................................................ 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CCACTTAGAACTGGTACGGAC................................................................. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGGACGGAC................................................................. 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGTACGGACAAGGAA........................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGCACGGACAA............................................................... 20 3 7 0.29 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACGTAGAACGGGTACGGACAA............................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................TATTGAACAATGCCACAAAT.......................................................................................................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ATTGGACAATGGGGGTAAC....................................................................................................................................................................................................................... 19 3 18 0.22 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGCACGGACAAGG............................................................. 20 3 14 0.21 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGTACGGACAAGGA............................................................ 19 3 11 0.18 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGGACGGA.................................................................. 18 2 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TCTCGTGAACAATGCCGGAAA........................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACATAGAACTGGTACGGACA................................................................ 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................AATGAACAATGCCAAAAATC......................................................................................................................................... 20 2 12 0.17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CCACTTAGAACTGGTACGGA.................................................................. 20 3 12 0.17 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AACGTAGAACTGGTACGGA.................................................................. 19 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CATGAATGGAAAAAAAAA..................................................................................................................................................................... 18 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CAACTTAGAACTGGGACG.................................................................... 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CAGAACTGGTACGGACAAG.............................................................. 19 3 14 0.14 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CTTAGAACTGGTACGTACA................................................................ 19 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGTACGGACAAAAAA........................................................... 21 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGTACGGACAAGAC............................................................ 19 3 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGAACTGGCACGGACAAG.............................................................. 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................CCGTAGAACTGGCACGGAC................................................................. 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................CCTAGAACTGGTACGGACA................................................................ 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTGGACAATGGGGAAACC....................................................................................................................................................................................................................... 18 2 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ATTGGACAAGGGGGAAACC....................................................................................................................................................................................................................... 19 3 19 0.11 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................ATTTGACAATGGGGGAAAC....................................................................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATGGAAGAAGACGTTTTGGT........... 20 3 11 0.09 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGATCTGGTACGGACAAG.............................................................. 19 3 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGTACGAACAAGGG............................................................ 19 3 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TGGCAATGGGGATAGCGTGT................................................................................................................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GAACTGGGACGGACAAGGG............................................................ 19 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTACGGACAAT.............................................................. 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TAGAACTGGTGCGGACAAG.............................................................. 19 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CATGAATGAAATAAACAA..................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGATAGAATTAGAGGTATT.............. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CGACTTAGAACTGGTACG.................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................ACTTAGAACTGGTACGAC.................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............ATATTGGACAATGGGG............................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................................................................................................ATGTTTGAAACTTTAGTG......................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TGCATCAGTGAAAAAAAAA...................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TGAACAATAACGATAAATAAACTGTTACCCCTATGGCTCATAAAAACTTACATACATTATCTCTCGACGTACTTACTTTTTTTTTTTTGTAAGATTACTTGTTACGGTCTTTACTCAATTCACTTTAACTTACGTTTCTGCTTATACAAACTTTCACATCACGCCGGTGCATCTTGACCCTGCTTGTTCTTTCTTTTGCTTAAATTACTCACCATTACGCTACCTTATTCTCCAAAACAAAGCTTACGTAA
**************************************************.((((((.........))))))................(((((.(((..((...((((....)).))...))...))))))))............((((((.....((..((((....))))..)).....))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060656
9x160_ovaries_total
 V053
head
 SRR060671
9x160_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060673
9_ovaries_total
.......................................................................................................................................................................................TTGTTCTGTCTTTTGCTTA................................................. 19 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................TGTTACGGTCTTTCCTCGATTCC................................................................................................................................. 23 3 2 0.50 1 0 1 0 0 0 0
..................ATTCTGTTGCCCCTATGGC...................................................................................................................................................................................................................... 19 3 7 0.14 1 0 0 0 1 0 0
........................................................................................................................................................................................TGCACCTTCTTTTGCTTAAAT.............................................. 21 3 7 0.14 1 0 0 1 0 0 0
.........................................................................................................................................................................................................AAATTATGCACCGTTACGCT.............................. 20 3 9 0.11 1 0 0 0 0 1 0
.......................................................................................................................................................................................TTGCTTATTCTTTTGCTTAAAT.............................................. 22 3 20 0.05 1 0 0 1 0 0 0
......................................................................................................TACGGTCTTTCCTCGATTCA................................................................................................................................. 20 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13036:1090705-1090955 + dvi_14102 ACTTGTT-ATTGCTAT-T------------------TATTTGACAATGGGG----------------ATACCGAGTATTTTT-----------------------------------GA--ATGT---------------AT--GTAAT------------------------AGAGAGCTGCATGAATGAAAA--AAAAAAAACATTCTAATGAACAATGCCAGAA---------ATGAGTTAAGTGAAATTGAATGCAAAGACGAATATGTTTGAAAGTGTA-GT--------------------GCGGCCACGTAGAA----------CTGGGACGAACAAGA----------AAGAAAACGAATTTAATGAGT-GGTAATGCGATGGAATA--AGAGGTTTTGTTTCGAATGCATT
droMoj3 scaffold_6500:30025899-30026167 + ATTTGTT-TTTGTATACTTTGTTA-TTAACTTTTTA---------------------------------------T-------------ACC--CTGAACCCATTGAAA--AT--------GGGT---------------AT--AGAGT------------------------AGACGTCTGCATGAATGGCAA--AAAAAGCACATTCAACTGTACAAAGTCATCA---------TTGAATTGAGTGAAAACTTGAAAAAAACGAAATGAGAATGAGTGAGCGACT--------------------GAAGTCGTGTTTCT----------CTCGGCTGCACAAAAATATTGCCGAAAAGAAACGAAGTGAGTGAGT-GAGCAGTAGAAGCTATT--AAATGTTGTATATTGAATACATT
droGri2 scaffold_3249:552-770 + ACTTGGA-ACTGTTTT-ATTTTTAAT-----CA----------CATGATGT----------------GTGCTTA---------------------------------TT--------------AC---------------GTTGTTTTTAAAATATTCCATGAAGTAAAATCCATTGAACTACGATAAATATGA--AATCAGTTTGTAATAATGATCGATGCTAGAA---------ATCA-----------------------------------------------------------------------TTATTTGCGT----------TCCATGAATAAAAAAAGGAA-ATAGCAGGTATGAAAATGT--GCA---------AAGACGACGAGAGAGAAAT-CAAATCGAGCA-AAT
droWil2 scf2_1100000004898:37877-38128 - TTAAGTC-ATATTA-----------------------A-------------------------------------T-------------TCG--GAAAAACTATGGAAT--ATGTCGGA--TAGT---------------GT--TGATT------------------------AGAGAGCTGCATGAATGATAG--AAAAATCA-ATTCGAGTTAACAACATTCAAAACCAAATAAATGAATTGAATGACTTTGAAAATCGACTTCAACT---------AAATGAGT--------------------GTG-CGACGTAAAA----------ATCAGTCGCACAACATTCAA-ACGAAACAAAACGAATTGAATGAGTTAGAAAGTGAGTC-AATA--AGTTGCTATGATTCGAATGCATT
dp5 XR_group5:293005-293213 + TAT-----------------------------------------------------------------------------------------------------------------------------------------AT--GTATT------------------------AGAGCTCTGCGTGAATGGCAACAAATACCGGCATTTTAATTAACAATGCGCAAA---------ATGAATTGAATGAATTCGAATTCGAAGTGTAAGTGCAATGACAAA-----------------TGTACATATGTATGTACGTACGAGTATGTATAGCTCCTAAATACAACATTCGA-ACAACCTGGCACGAATTGTGAGGA------------------G--AGTGGCT-GTTTCCGAATTCATT
droPer2 scaffold_58:119969-120190 - TAT-----------------------------------------------------------------------------------------------------------------------------------------AT--GTATT------------------------AGAGCTCTGCGTGAATGGCAACAAATACCGGCATTTTAATTAACAATGCGCACA---------ATGAATTGAATGAATTCGAATGGTGCGCCGATGGAGTTTGAGTGTGTAAGTGCCATGAAAAATGTACA----TACGTACGTACGAGTATGTATAGCTCCTAAATACAACATTCGA-ACAACCTGGCACGAATTGTGAGGA------------------G--AGGGGCT-GTTTCCGAATTCATT
droAna3 scaffold_13417:4908688-4908928 - TTGCATT---TGATT----------------------TTATA---ATAATT----------------TTGAAT--AAT----------------C--------------------CTAACAGCGT---------------AT--GAAGT------------------------AGACATCTGCATGAGTGGCAA--AAAACCCACATTCAAACGCACAATGCTAAAA---------ATGAGTTGAGTGAATTTGAGAGCAAAGCCAACATGATGTGAGAGGGTTGGA--------------------TCTCTTACGC-CTA----------CTCATTTGCACAATCATTTG-GTAGAAGGAAACGAATTTAGTGAACTGAGAACGTTGAAAACAG--AGACGTT-T----------CATT
droBip1 scf7180000395185:8647-8906 - TTTGATT-ATCGAATTT-----------------------------------------------------TTTGTTTTGTTATGTTGGTACACTC--TTCCC---------------TA--ACAT---------------CT--GTACT------------------------AGAGGTCTGCATAAATAGGTA--AAAAACGACATTCAAATGCACAACCTTTAAA---------ATGAATTGAGTGAGATAGAATGCTGAGACGAAAATTAATGAATTGATGAGT--------------------GCGACTGTGTAGGT----------CTCACTCGCACAACATTCGG-GGAATGAAAACCTAATTGAATGAGTTAGAGTTACAGTT--CGC--ATTCGAATTGTTTCGAATGCATT
droKik1 scf7180000301507:7523-7739 - TTTTGTT--------------------------------------------------------------------------------------------------------------------GT---------------AC--ATATT------------------------AGACATCTACATGAGTGGCAA--AAAAATGGCATTTAAATGCACAAAGCTCAAA---------ATGAGTTGAGTGAATTTGAAGCAAATGCCAAACTAAATGGAATGAGTTGAC--------------------TCGCTTACGTAGGA----------CTCGGCCGCACAAAGAATAG-AGAAGGAGAAACGAATGGAATGAAATGAGAACTCGGAAAACTG--AGACGCT-GTATTCGAATG-ATT
droFic1 scf7180000451907:13429-13676 - TTGTAA---TTGAAT--A------------------TAGCTGGTACAGAGG----------------GTACCCA---------------------------------AT--------------AT---------------GTGAGCTTT------------------------AGACATCTGCATAAGTGGCAA--AAAACCCACATTCAAATGCACAATGCTTAAA---------ATGAGTTGAGTGAATTTGAGAGCGAAGCCAACATGGAGTGAAAGGGTTGGC--------------------TCTCTTTCAC-CTA----------CTCATTTGCACAAAGAGCAG-GTAGAAGGAAACGAATTGAGTGAATTGAGAACGTTGAAAACAG--AGACGTT-TCATTCGAATG-ATT
droEle1 scf7180000489742:896-1075 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAGCTGAACGAATGTCAA--AAAATCTAAATTCGAATGTACAATGCTTAAA---------ATGAGTTAGGTGAATTTGAATGAGAAGCTAGACAAGTATGAGTGAGTGAGT--------------------GG------------------------------TACGAC---AAACCTGACAGAAAACCAAATAAACGAAT-GAGAACAATATGTAATT--GAACGAG-TTATTCGAATACATT
droRho1 scf7180000772208:140-236 + TCAGTGC---GAT----T------------------CTTATGACAATGAGG----------------ATATTTATAATATTA-----------------------------------AA--TTGG---------------AT--GAAGA------------------------AAA----------------------AAATTGCATTTAA-------------------------------------------------------------------AAAATAAGT-------------------------------------------------------------------------------------------AAG------------------------TATTTAAAAAGAACA
droBia1 scf7180000297051:5803-5918 - AAAGTA---------------------------------------------------------------------------------------------------------------------------------------T--AATAA------------------------AGAGAAAAGAAGAAATGAAAA--AATAATAAGATTACAAAAAAATACCTTAAAA---------ACAAAACAAATCAAAATGAAT-------------------------------------------------------------------------------------------------------------------------AAGTATTGTGAAAAGTG--CAACAGG-GTA--------ATGT
droTak1 scf7180000415572:23477-23730 - TGTTTTT-GTTAACT----------------TT------TCGA-GCTCAGT----------------TCGCTGAATCT------------------------TT---TC------------GTGT---------------AC--GTGTT------------------------AGACATCTGCATGAATAACAA--AAAATACATATTCGAATTGACAATGTTCGAA---------ATGAGTTGAATGAGTTGGAATGTGTAGGGAAACTGGCTTGAATAAATAAGT--------------------GTACTGACGTAAAA----------TTCAGTCGAACCAGAAATG--GTGATGGAAAACGAATCGAGTAAAT-GAGTACACGAACAACTC--AGACGAATTTATTCGAATCCATT
droEug1 scf7180000409588:14778-15034 + ATTTCTT-TTCGAAAAT-------------------TCATCGACAAGCTAGCATCCAAAGATTATACATACTGA---------------------------------ATTT------AA----ACTTTTTAGCTCTAATAGT--TCCTG------------------------AGATATCAGC---------------------GATTCAAATGCACAATGCTCAAA---------ATGAGTTAAGTTAATTTGAAAGCAAAGCCAAACTGGAGTGAGTGAGTTGCC--------------------TCGCTTACGTACGA----------CTCATTCGCACAAAGAATAG-AGAAAGAGAAACGAATTGAATGAAGTGAAAACTCAGAAAACTG--AGACGCT-G----------AATT
dm3 chr2RHet:2892931-2892997 - AAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAACTGTTAAAACGGTTAAAACAACAT---------ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACACGAA
droSim2 node_92824:2-208 + T-----------------------------------------------------------------------------------------------------------------------------------------------GTATT------------------------AGAAATCTGCATGAGTGGCGA--AAAAGGCACATTCAAATGCACAATGCCGAAA---------ATGAATGGAATGAGAATGAAAGCAAAGTCAAACTGGTATGAGTGAGTGAGT--------------------GAATTTACGTACGA----------CTCAGTCGCACAACAACGAA-ACAGATGGAAATGAATTGAATGGAATGAGAACACAGTAAATTG--AGACGCT-TCATTCGAATG-ATT
droSec2 scaffold_539:6835-6891 - AAGTGTC-ATTACATC-ATATTGAAT-----TG-------TGGTAATGGAG----------------TTACCGAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGA----ATG
droYak3 3L:23747267-23747521 - GTTTTTTTATCGTTCC-CTATCGA-TCGACCGCTAT---------------------------------------TATCGTA-----------------------------------GA--AGCG---------------GT--GTACT------------------------AGACATCTGCATGAGTGGCGA--AAAAGGCACATTCAAATGCACAATGCCGAAA---------ATGAATGGAATGAGAATGAAAGCAAAGTCAAACTGGTATGAGTGAGTGAGT--------------------GAATTTACGTACGA----------CTCAGTCGCACAACAACGAA-ACAGATGGAAATGAACTGAATGGAATGAGAACACAGTAAATTG--AGACGCT-TCATTCGAATG-ATT
droEre2 scaffold_4690:18418066-18418156 + GAG-----------------------------------------------------------------------------------------------------------------------TGC---------------AC--GGAAC------------------------CGAAAACTGCTCAAAAAAAAA--AAAAAAAACAGGAAAATG------------------------------------------------------------------------------------------------------------------------------------------------------------GGTACA---------GGGAAAGTACAGGGAAATT-CAACTTTAAGG-CGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ACTTGTT-ATTGCTAT-T------------------TATTTGACAATGGGG----------------ATACCGAGTATTTTT-----------------------------------GA--ATGT---------------AT--GTAAT------------------------AGAGAGCTGCATGAATGAAAA--AAAAAAAACATTCTAATGAACAATGCCAGAA---------ATGAGTTAAGTGAAATTGAATGCAAAGACGAATATGTTTGAAAGTGTA-GT--------------------GCGGCCACGTAGAA----------CTGGGACGAACAAGA----------AAGAAAACGAATTTAATGAGT-GGTAATGCGATGGAATA--AGAGGTTTTGTTTCGAATGCATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................ATGTTTGAAAGTGTA-GT--------------------GC...............................................................................................................1912.002001000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TTGAAAGTGTA-GT--------------------GCGGCCACGTAG.....................................................................................................2511.001000000000000000000001000000000000000000000000000000000000000000
droMoj3
ATTTGTT-TTTGTATACTTTGTTA-TTAACTTTTTA---------------------------------------T-------------ACC--CTGAACCCATTGAAA--AT--------GGGT---------------AT--AGAGT------------------------AGACGTCTGCATGAATGGCAA--AAAAAGCACATTCAACTGTACAAAGTCATCA---------TTGAATTGAGTGAAAACTTGAAAAAAACGAAATGAGAATGAGTGAGCGACT--------------------GAAGTCGTGTTTCT----------CTCGGCTGCACAAAAATATTGCCGAAAAGAAACGAAGTGAGTGAGT-GAGCAGTAGAAGCTATT--AAATGTTGTATATTGAATACATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGA...........................................................................................................................................................................242010.05201838400259
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTG............................................................................................................................................................................23202.20444310000
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGTCGTG........................................................................................................28201.953918000201
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGTC...........................................................................................................25201.70349100240
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGAAAAC.......................................................................................................................................................................28201.503014000151
...........................................................................................................................................................................................................................................................................ATGAGAATGAGTGAGCGACT--------------------GAAG.............................................................................................................24201.00201200035
....................................................................................................................................................................................................................................................................................................................................................ACAAAAATATTGCCGAAAAGAA..........................................................2211.001100000
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGT............................................................................................................24200.8517730052
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGTCG..........................................................................................................26200.7515720033
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGAAAACT......................................................................................................................................................................29200.6012500070
.........................................................................................................................................................................................................................AAAGTCATCA---------TTGAATTGAGTGA...........................................................................................................................................................................23200.60121020000
.........................................................................................................................................................................................................................................................................AAATGAGAATGAGTGAGCGACT--------------------GAAG.............................................................................................................26200.5511710012
................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGT-GAGCAGTAGAAGCTA...........................2480.504000004
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAG.............................................................................................................23200.5010620020
...........................................................................................................................................................................................................................................................................ATGAGAATGAGTGAGCGACT--------------------GAAGTC...........................................................................................................26200.408200060
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGAAA.........................................................................................................................................................................26200.408400013
..............................................................................................................................................................................................................................................................................................T--------------------GAAGTCGTGTTTCT----------CTCGGCTGCACA.............................................................................27200.408700010
................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGT-GAGCAGTAGAAGCTAT..........................2580.383000003
....................................................................................................................................................................................TGCATGAATGGCAA--AAAAAGCACATTC...................................................................................................................................................................................................................27200.306500010
.............................................................................................................................................................................................................................................................................GAGAATGAGTGAGCGACT--------------------GAAGTCGTG........................................................................................................27200.255210011
...............................................................................................................................................................................................................................................................................GAATGAGTGAGCGACT--------------------GAAGTCGTG........................................................................................................25200.255500000
...........................................................................................................................................................................................................................................................................ATGAGAATGAGTGAGCGACT--------------------GAAGTCG..........................................................................................................27200.255010004
..............................................................................................................................................................................................................................................................................AGAATGAGTGAGCGACT--------------------GAAGTCGTG........................................................................................................26200.204100030
.........................................................................................................................................................................................................................AAAGTCATCA---------TTGAATTGAGTG............................................................................................................................................................................22200.204400000
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGAA..........................................................................................................................................................................25200.204200002
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGAAAACA......................................................................................................................................................................29200.204400000
..................................................................................................................................................................................TCTGCATGAATGGCAA--AAAAAGCACA......................................................................................................................................................................................................................26200.204300001
....................................................................................................................................................................................TGCATGAATGGCAA--AAAAAGCACATTCA..................................................................................................................................................................................................................28200.153000030
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGT.............................................................................................................................................................................22200.153300000
.............................................................................................................................................................................................................................................................................GAGAATGAGTGAGCGACT--------------------GAAGTC...........................................................................................................24200.153300000
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGC............................................................................................................24200.153000030
..........................................................................................................................................................................................................................................................................................CGACT--------------------GAAGTCGTGTTTCT----------CTCGGC...................................................................................25200.153200010
.....................................................................................................................................................................................................................................................................AACGAAATGAGAATGAGTGAGCGAC......................................................................................................................................25200.153100020
................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGT-GAGCAGTAGAAG..............................2180.131000001
................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGT-GAGCAGTAGAAGCT............................2380.131000001
................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGT-GAGCAGTAGAAGCTATT--.......................2680.131000010
................................................................................................................................................................................................................................................................................................................................................................................TGAGTGAGT-GAGCAGTAGAAGCTATT--AA.....................2880.131000001
.....................................................................................................................................................................................GCATGAATGGCAA--AAAAAGCACATT....................................................................................................................................................................................................................25200.102100010
........................................................................................................................................................................................................................................................................GAAATGAGAATGAGTGAGCGACT--------------------GAAG.............................................................................................................27200.102200000
......................................................................................................................................................................................................................................................................................TGAGCGACT--------------------GAAGTCGTGTTTCT----------CTCGG....................................................................................28200.102100010
....................................................................................................................................................................................TGCATGAATGGCAA--AAAAAGCACAT.....................................................................................................................................................................................................................25200.102200000
..............................................................................................................................................................................................................................................................................................T--------------------GAAGTCGTGTTTCT----------CTCGGC...................................................................................21200.102100010
..............................................................................................................................................................................................................................................................................................T--------------------GAAGTCGTGTTTCT----------CTCGGCTGC................................................................................24200.102200000
....................................................................................................................................................................................................................TGTACAAAGTCATCA---------TTGAATTGAGTGA...........................................................................................................................................................................28200.102200000
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGA...............................................................................................................................................................................20200.102000020
..........................................................................................................................................................................................................................................................................................................................TGTTTCT----------CTCGGCTGCACAAAAATAT......................................................................26200.102200000
....................................................................................................................................................................................................................TGTACAAAGTCATCA---------TTGAATTGAGTG............................................................................................................................................................................27200.102200000
.............................................................................................................................................................................................................................................................................GAGAATGAGTGAGCGACT--------------------GAAGTCG..........................................................................................................25200.102100001
.......................................................................................................................................................................................................................................................................................................................TCGTGTTTCT----------CTCGGCTGCAC..............................................................................21200.102200000
.........................................................................................................................................................................................................................................................................AAATGAGAATGAGTGAGCGACT--------------------G................................................................................................................23200.102200000
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGAAAA........................................................................................................................................................................27200.102200000
..............................................................................................................................................................................................................................................................................................T--------------------GAAGTCGTGTTTCT----------CTCGG....................................................................................20200.102100010
.....................................................................................................................................................................................................................................................................AACGAAATGAGAATGAGTGAGCGA.......................................................................................................................................24200.102200000
......................................................................................................................................................................................................................TACAAAGTCATCA---------TTGAATTGAGTGA...........................................................................................................................................................................26200.102110000
.......................................................................................................................................................................................................................ACAAAGTCATCA---------TTGAATTGAGTGA...........................................................................................................................................................................25200.102100010
....................................................................................................................................................................................TGCATGAATGGCAA--AAAAAGCACATT....................................................................................................................................................................................................................26200.102000020
...........................................................................................................................................................................................ATGGCAA--AAAAAGCACATTCAACTGTA............................................................................................................................................................................................................27180.061000010
...................................................................................................................................................................................................................................................................AAAACGAAATGAGAATGAGTGAGC.........................................................................................................................................24200.051000001
...............................................................................................................................................................................................................................................................................GAATGAGTGAGCGACT--------------------GAAGTCGT.........................................................................................................24200.051100000
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGC...........................................................................................................................................................................24200.051010000
.........................................................................................................................................................................................................................................................................AAATGAGAATGAGTGAGCGACT--------------------.................................................................................................................22200.051100000
...........................................................................................................................................................................................................................AGTCATCA---------TTGAATTGAGTGAAAAC.......................................................................................................................................................................25200.051100000
..........................................................................................................................................................................................................................................................................................................................TGTTTCT----------CTCGGCTGCACAAAAATA.......................................................................25200.051000010
....................................................................................................................................................T------------------------AGACGTCTGCATGAATGGCA...................................................................................................................................................................................................................................21200.051100000
......................................................................................................................................................................................................................................................................ACGAAATGAGAATGAGTGAGCGACT--------------------GA...............................................................................................................27200.051000010
.............................................................................................................................................................................................................................................................................GAGAATGAGTGAGCGACT--------------------GAAGT............................................................................................................23200.051100000
.........................................................................................................................................................................................................................................................................AAATGAGAATGAGTGAGCGACT--------------------GAA..............................................................................................................25200.051100000
...............................................................................................................................................................................................................................................................................GAATGAGTGAGCGACT--------------------GAAGTCGTGTT......................................................................................................27200.051100000
.....................................................................................................................................................................................GCATGAATGGCAA--AAAAAGCACAT.....................................................................................................................................................................................................................24200.051100000
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATT.................................................................................................................................................................................18200.051000010
....................................................................................................................................................................................................................................................................AAACGAAATGAGAATGAGTGAGCGAC......................................................................................................................................26200.051100000
.........................................................................................................................................................................................................................AAAGTCATCA---------TTGAATTGAGTGAAAAC.......................................................................................................................................................................27200.051000010
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGG...........................................................................................................................................................................24200.051010000
...........................................................................................................................................................................................................................AGTCATCA---------TTGAATTGAGTGA...........................................................................................................................................................................21200.051010000
..........................................................................................................................................................................................................................................................................AATGAGAATGAGTGAGCGACT--------------------GAAG.............................................................................................................25200.051100000
.........................................................................................................................................................................................................................................................................AAATGAGAATGAGTGAGCGACT--------------------GA...............................................................................................................24200.051000010
.....................................................................................................................................................................................................................GTACAAAGTCATCA---------TTGAATTGAGT.............................................................................................................................................................................25200.051010000
.......................................................................................................................................................................................................................................................................................................................TCGTGTTTCT----------CTCGGCTGCACA.............................................................................22200.051000010
...................................A---------------------------------------T-------------ACC--CTGAACCCATTGAAA--AT--------GG.........................................................................................................................................................................................................................................................................................................24200.051100000
..............................................................................................................................................................................................................................................................................AGAATGAGTGAGCGACT--------------------GAAGTCGTGT.......................................................................................................27200.051100000
.....................................................................................................................................................................................................................................................................AACGAAATGAGAATGAGTGAGCGACT--------------------G................................................................................................................27200.051100000
...................................................................................................................................................................................................................................................................AAAACGAAATGAGAATGAGTGAGCG........................................................................................................................................25200.051000010
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGTCGT.........................................................................................................27200.051100000
...................................................................................................................................................................................................................................................................AAAACGAAATGAGAATGAGTGAGCGAC......................................................................................................................................27200.051100000
.............................................................................................................................................................................................................................TCATCA---------TTGAATTGAGTGAAAACTTG....................................................................................................................................................................26200.051100000
..............................................................................................................................................................................................................................................................................AGAATGAGTGAGCGACT--------------------GAAGTCG..........................................................................................................24200.051000001
....................................................................................................................................................................................................................TGTACAAAGTCATCA---------TTGAATTGAGT.............................................................................................................................................................................26200.051100000
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGTCGTT........................................................................................................28200.051100000
....................................................................................................................................................................................TGCATGAATGGCAA--AAAAAGCACATC....................................................................................................................................................................................................................26200.051000010
..................................................................................................................................................................................TCTGCATGAATGGCAA--AAAAAGCACAT.....................................................................................................................................................................................................................27200.051100000
........................................................................................................................................................................................................................................................................GAAATGAGAATGAGTGAGCGACT--------------------GAA..............................................................................................................26200.051000010
........................................................................................................................................................................................................................................................................................AGCGACT--------------------GAAGTCGTGTTTCT----------CTCGGC...................................................................................27200.051100000
..................................................................................................................................................................................................................ACTGTACAAAGTCATCA---------TT......................................................................................................................................................................................19200.051100000
..............................................................................................................................................................................................................................CATCA---------TTGAATTGAGTGAAAACT......................................................................................................................................................................23200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................T--AAATGTTGTATATTGAATACATT24200.051000001
.........................................................................................................................................................................................................................................................................AAATGAGAATGAGTGAGCGAC......................................................................................................................................21200.051000010
........................................................................................................................................................................................................................................................................................................................CGTGTTTCT----------CTCGGCTGCACAAA...........................................................................23200.051100000
........................................................................................................................................................................................................................CAAAGTCATCA---------TTGAATTGAGTGAAACT.......................................................................................................................................................................28200.051000010
............................................................................................................................................................................................................................................................................................ACT--------------------GAAGTCGTGTTTCT----------CTCGGCT..................................................................................24200.051000001
..............................................................................................................................................................................................................................................................................AGAATGAGTGAGCGACT--------------------GAAGTC...........................................................................................................23200.051100000
................................................................................................................................................................................................................CAACTGTACAAAGTCATCA---------TT......................................................................................................................................................................................21200.051000010
..............................................................................................................................................................................................................................................................................................T--------------------GAAGTCGTGTTTCT----------CTCGGCTGCA...............................................................................25200.051100000
................................................................................................................................................................................................................................................................................AATGAGTGAGCGACT--------------------GAAGTCGTG........................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................ACGAAATGAGAATGAGTGAGCGAC......................................................................................................................................24200.051000010
.............................................................................................................................................................................AGACGTCTGCATGAATGGCAA--AAAA............................................................................................................................................................................................................................25200.051100000
....................................................................................................................................................T------------------------AGACGTCTGCATGAATGGCAA--AAA.............................................................................................................................................................................................................................25200.051100000
..........................................................................................................................................................................................................................AAGTCATCA---------TTGAATTGAGTGA...........................................................................................................................................................................22200.051100000
.......................................................................................................................................................................................................................ACAAAGTCATCA---------TTGAATTGAGTGAAA.........................................................................................................................................................................27200.051100000
................................................................................................................................................................................................................................................................................AATGAGTGAGCGACT--------------------GAAGT............................................................................................................20200.051000010
...................................................................................................................................................................................................................................................................................................................GAAGTCGTGTTTCT----------CTCGGCTGCA...............................................................................24200.051100000
.......................................................................................................................................................................................................................................................................CGAAATGAGAATGAGTGAGCGACT--------------------G................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................................TGAGAATGAGTGAGCGACT--------------------GAAGTCC..........................................................................................................26200.051000010
................................................................................................................................................................................................................................................................................................................................................................CCGAAAAGAAACGAAGTGAGTGAGT-G.........................................26200.051100000
.....................................................................................................................................................................................................................................................................AACGAAATGAGAATGAGTGAGCG........................................................................................................................................23200.051100000
droGri2
ACTTGGA-ACTGTTTT-ATTTTTAAT-----CA----------CATGATGT----------------GTGCTTA---------------------------------TT--------------AC---------------GTTGTTTTTAAAATATTCCATGAAGTAAAATCCATTGAACTACGATAAATATGA--AATCAGTTTGTAATAATGATCGATGCTAGAA---------ATCA-----------------------------------------------------------------------TTATTTGCGT----------TCCATGAATAAAAAAAGGAA-ATAGCAGGTATGAAAATGT--GCA---------AAGACGACGAGAGAGAAAT-CAAATCGAGCA-AATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TTAAGTC-ATATTA-----------------------A-------------------------------------T-------------TCG--GAAAAACTATGGAAT--ATGTCGGA--TAGT---------------GT--TGATT------------------------AGAGAGCTGCATGAATGATAG--AAAAATCA-ATTCGAGTTAACAACATTCAAAACCAAATAAATGAATTGAATGACTTTGAAAATCGACTTCAACT---------AAATGAGT--------------------GTG-CGACGTAAAA----------ATCAGTCGCACAACATTCAA-ACGAAACAAAACGAATTGAATGAGTTAGAAAGTGAGTC-AATA--AGTTGCTATGATTCGAATGCATTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................TTCAA-ACGAAACAAAACGAATTG..................................................23200.05100010
dp5
TAT-----------------------------------------------------------------------------------------------------------------------------------------AT--GTATT------------------------AGAGCTCTGCGTGAATGGCAACAAATACCGGCATTTTAATTAACAATGCGCAAA---------ATGAATTGAATGAATTCGAATTCGAAGTGTAAGTGCAATGACAAA-----------------TGTACATATGTATGTACGTACGAGTATGTATAGCTCCTAAATACAACATTCGA-ACAACCTGGCACGAATTGTGAGGA------------------G--AGTGGCT-GTTTCCGAATTCATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................TGCGCAAA---------ATGAATTGAATGAATTCGAA....................................................................................................................................................................2830.3310100000000
droPer2
TAT-----------------------------------------------------------------------------------------------------------------------------------------AT--GTATT------------------------AGAGCTCTGCGTGAATGGCAACAAATACCGGCATTTTAATTAACAATGCGCACA---------ATGAATTGAATGAATTCGAATGGTGCGCCGATGGAGTTTGAGTGTGTAAGTGCCATGAAAAATGTACA----TACGTACGTACGAGTATGTATAGCTCCTAAATACAACATTCGA-ACAACCTGGCACGAATTGTGAGGA------------------G--AGGGGCT-GTTTCCGAATTCATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TTGCATT---TGATT----------------------TTATA---ATAATT----------------TTGAAT--AAT----------------C--------------------CTAACAGCGT---------------AT--GAAGT------------------------AGACATCTGCATGAGTGGCAA--AAAACCCACATTCAAACGCACAATGCTAAAA---------ATGAGTTGAGTGAATTTGAGAGCAAAGCCAACATGATGTGAGAGGGTTGGA--------------------TCTCTTACGC-CTA----------CTCATTTGCACAATCATTTG-GTAGAAGGAAACGAATTTAGTGAACTGAGAACGTTGAAAACAG--AGACGTT-T----------CATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................TG-GTAGAAGGAAACGAATTTAGTGAAC...........................................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................TTTG-GTAGAAGGAAACGAATTTAGT...............................................2520.501010000
....................................................................TGAAT--AAT----------------C--------------------CTAACAGCGT---------------AT--GAA.................................................................................................................................................................................................................................................................................2420.501000010
................................................ATT----------------TTGAAT--AAT----------------C--------------------CTAACAGCGT---------------AT--....................................................................................................................................................................................................................................................................................2520.501000001
.....................................................................GAAT--AAT----------------C--------------------CTAACAGCGT---------------AT--....................................................................................................................................................................................................................................................................................2020.501000010
...................................................................................................................................................GT------------------------AGACATCTGCATGAGTGGC....................................................................................................................................................................................................................................2180.383012000
............................................................................................................................................................................................................................................................TGAGAGCAAAGCCAACATGATGTGAG..............................................................................................................................................26200.306006000
..................................................................................................................................................AGT------------------------AGACATCTGCATGAGTGG.....................................................................................................................................................................................................................................2160.171100000
..................................................................................................................................................AGT------------------------AGACATCTGCATGAGTGGC....................................................................................................................................................................................................................................2260.171100000
.........................................................................................................................................................................................................................................................................................................................................................................................TGAGAACGTTGAAAACAG--AGACGTT-...............25200.102000020
.................................................................................................................................................................................................................................................................................................................................................TGCACAATCATTTG-GTAGAAGGAAA.........................................................25200.102110000
...............................................................................................................................................................................................................................................................................................................................................TTTGCACAATCATTTG-GTAGAAGGAA..........................................................26200.102020000
.................................................................................................................................................................................................................................AA---------ATGAGTTGAGTGAATTTGAGAGC.................................................................................................................................................................25200.102020000
..........................................................................................................................................................................................................................................................................................TTGGA--------------------TCTCTTACGC-CTA----------CTCATTTGCA...............................................................................28200.051100000
...........................................................................................................................................................................................................................................................TTGAGAGCAAAGCCAACATGATGT.................................................................................................................................................24200.051010000
......................................................................................................................................................................................................................................................................................................................CTTACGC-CTA----------CTCATTTGCACAATCA.........................................................................26200.051100000
.................................................................................................................................................................................................................................................................GCAAAGCCAACATGATGTGAGAGC...........................................................................................................................................24200.051010000
.............................................................................................................................................................................................................................................................................................................................................CATTTGCACAATCATTTG-GTAGAAGGA...........................................................27200.051010000
............................................................................................................................................................................................................................................................................................................................C-CTA----------CTCATTTGCACAATCATTTG-GT..................................................................26200.051010000
........................................................................................................................................................................................................................................................................................................................TACGC-CTA----------CTCATTTGCACAATCATT.......................................................................26200.051010000
....................................................................................................................................................T------------------------AGACATCTGCATGAGTGGCAA--AAAACC..........................................................................................................................................................................................................................28200.051100000
...........................................................................................................................................................................................................................................................TTGAGAGCAAAGCCAACATGATGTG................................................................................................................................................25200.051100000
................................................................................................................................................................................................................................................................................................................................................TTGCACAATCATTTG-GTAGAAGGA...........................................................24200.051100000
.............................................................................................................................................................................................................................................................GAGAGCAAAGCCAACATGATGTGAGA.............................................................................................................................................26200.051010000
..................................................................................................................................................................................................................................................TGAGTGAATTTGAGAGCAAAGC............................................................................................................................................................22200.051100000
..........................................................................................................................................................................................................................................................TTTGAGAGCAAAGCCAACATGATG..................................................................................................................................................24200.051001000
........................................................................................................................................................................................................................................................................................................................................................TCATTTG-GTAGAAGGAAACG.......................................................20200.051100000
.......................................................................................................................................................................................................................................................................................................................TTACGC-CTA----------CTCATTTGCACAATCAT........................................................................26200.051100000
....................................................................................................................................................................................................................................................................................................................CTCTTACGC-CTA----------CTCATC...................................................................................18200.051010000
............................................................................................................................................................................................................................GCTAAAA---------ATGAGTTGAGTGAATTT.......................................................................................................................................................................24200.051010000
..............................................................................................................................................................................................................................................................................GATGTGAGAGGGTTGGA--------------------TCT..............................................................................................................20200.051000010
..........................................................................................................................................................................................................................................................................................TTGGA--------------------TCTCTTACGC-CTA----------CTCATTTGC................................................................................27200.051100000
droBip1
TTTGATT-ATCGAATTT-----------------------------------------------------TTTGTTTTGTTATGTTGGTACACTC--TTCCC---------------TA--ACAT---------------CT--GTACT------------------------AGAGGTCTGCATAAATAGGTA--AAAAACGACATTCAAATGCACAACCTTTAAA---------ATGAATTGAGTGAGATAGAATGCTGAGACGAAAATTAATGAATTGATGAGT--------------------GCGACTGTGTAGGT----------CTCACTCGCACAACATTCGG-GGAATGAAAACCTAATTGAATGAGTTAGAGTTACAGTT--CGC--ATTCGAATTGTTTCGAATGCATTSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTGTT--------------------------------------------------------------------------------------------------------------------GT---------------AC--ATATT------------------------AGACATCTACATGAGTGGCAA--AAAAATGGCATTTAAATGCACAAAGCTCAAA---------ATGAGTTGAGTGAATTTGAAGCAAATGCCAAACTAAATGGAATGAGTTGAC--------------------TCGCTTACGTAGGA----------CTCGGCCGCACAAAGAATAG-AGAAGGAGAAACGAATGGAATGAAATGAGAACTCGGAAAACTG--AGACGCT-GTATTCGAATG-ATTSizeHit CountTotal NormTotal
No Reads
droFic1
TTGTAA---TTGAAT--A------------------TAGCTGGTACAGAGG----------------GTACCCA---------------------------------AT--------------AT---------------GTGAGCTTT------------------------AGACATCTGCATAAGTGGCAA--AAAACCCACATTCAAATGCACAATGCTTAAA---------ATGAGTTGAGTGAATTTGAGAGCGAAGCCAACATGGAGTGAAAGGGTTGGC--------------------TCTCTTTCAC-CTA----------CTCATTTGCACAAAGAGCAG-GTAGAAGGAAACGAATTGAGTGAATTGAGAACGTTGAAAACAG--AGACGTT-TCATTCGAATG-ATTSizeHit CountTotal NormTotal
No Reads
droEle1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACAGCTGAACGAATGTCAA--AAAATCTAAATTCGAATGTACAATGCTTAAA---------ATGAGTTAGGTGAATTTGAATGAGAAGCTAGACAAGTATGAGTGAGTGAGT--------------------GG------------------------------TACGAC---AAACCTGACAGAAAACCAAATAAACGAAT-GAGAACAATATGTAATT--GAACGAG-TTATTCGAATACATTSizeHit CountTotal NormTotal
No Reads
droRho1
TCAGTGC---GAT----T------------------CTTATGACAATGAGG----------------ATATTTATAATATTA-----------------------------------AA--TTGG---------------AT--GAAGA------------------------AAA----------------------AAATTGCATTTAA-------------------------------------------------------------------AAAATAAGT-------------------------------------------------------------------------------------------AAG------------------------TATTTAAAAAGAACASizeHit CountTotal NormTotal
No Reads
droBia1
AAAGTA---------------------------------------------------------------------------------------------------------------------------------------T--AATAA------------------------AGAGAAAAGAAGAAATGAAAA--AATAATAAGATTACAAAAAAATACCTTAAAA---------ACAAAACAAATCAAAATGAAT-------------------------------------------------------------------------------------------------------------------------AAGTATTGTGAAAAGTG--CAACAGG-GTA--------ATGTSizeHit CountTotal NormTotal
No Reads
droTak1
TGTTTTT-GTTAACT----------------TT------TCGA-GCTCAGT----------------TCGCTGAATCT------------------------TT---TC------------GTGT---------------AC--GTGTT------------------------AGACATCTGCATGAATAACAA--AAAATACATATTCGAATTGACAATGTTCGAA---------ATGAGTTGAATGAGTTGGAATGTGTAGGGAAACTGGCTTGAATAAATAAGT--------------------GTACTGACGTAAAA----------TTCAGTCGAACCAGAAATG--GTGATGGAAAACGAATCGAGTAAAT-GAGTACACGAACAACTC--AGACGAATTTATTCGAATCCATTSizeHit CountTotal NormTotal
No Reads
droEug1
ATTTCTT-TTCGAAAAT-------------------TCATCGACAAGCTAGCATCCAAAGATTATACATACTGA---------------------------------ATTT------AA----ACTTTTTAGCTCTAATAGT--TCCTG------------------------AGATATCAGC---------------------GATTCAAATGCACAATGCTCAAA---------ATGAGTTAAGTTAATTTGAAAGCAAAGCCAAACTGGAGTGAGTGAGTTGCC--------------------TCGCTTACGTACGA----------CTCATTCGCACAAAGAATAG-AGAAAGAGAAACGAATTGAATGAAGTGAAAACTCAGAAAACTG--AGACGCT-G----------AATTSizeHit CountTotal NormTotal
No Reads
dm3
AAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAACTGTTAAAACGGTTAAAACAACAT---------ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACACGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................TAAAACGGTTAAAACAACAT---------ACAAGT..................................................................................................................................................................................2681.63130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001000000000000000101200000000000000000000000000000000000000000000000000000000000002000000100000000100000000000000000200000000
............................................................................................................................................................................................................................................ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------C...........2171.1480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ACTGTTAAAACGGTTAAAACAACAT---------A.......................................................................................................................................................................................2630.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................T---------ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAA......2770.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACACGA.21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................TTAAAACGGTTAAAACAACAT---------ACAAGT..................................................................................................................................................................................2770.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................T---------ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------C...........2270.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CGGTTAAAACAACAT---------ACAAGT..................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000011001020000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACGGTTAAAACAACAT---------ACAAGTTAAA..............................................................................................................................................................................27200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TAAAACGGTTAAAACAACAT---------ACAAG...................................................................................................................................................................................2580.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACACG..21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TAAAACAACAT---------ACAAGTTAAA..............................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AACAT---------ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------C...........2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTAAAACGGTTAAAACAACAT---------ACAAG...................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CAT---------ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAA......2970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------C...........2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................T---------ACAAGTTAAAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CC..........2370.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GGTTAAAACAACAT---------ACAAGC..................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AAAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACACG..22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GGTTAAAACAACAT---------ACAAGT..................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TAAAACAACAT---------ACAAGTTAAAAAAA..........................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CGGTTAAAACAACAT---------ACAAGA..................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTAAAACAACAT---------ACAAGTTAA...............................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AAAACGGTTAAAACAACAT---------ACAAGT..................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AAAAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACAC...20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AACGGTTAAAACAACAT---------ACAAGTTAA...............................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AAAATAGAA--------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAACACG..19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T-----------------------------------------------------------------------------------------------------------------------------------------------GTATT------------------------AGAAATCTGCATGAGTGGCGA--AAAAGGCACATTCAAATGCACAATGCCGAAA---------ATGAATGGAATGAGAATGAAAGCAAAGTCAAACTGGTATGAGTGAGTGAGT--------------------GAATTTACGTACGA----------CTCAGTCGCACAACAACGAA-ACAGATGGAAATGAATTGAATGGAATGAGAACACAGTAAATTG--AGACGCT-TCATTCGAATG-ATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AAGTGTC-ATTACATC-ATATTGAAT-----TG-------TGGTAATGGAG----------------TTACCGAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGA----ATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................AAT-----TG-------TGGTAATGGAG----------------TTACC............................................................................................................................................................................................................................................................................................................................................................21200.1022000
droYak3
GTTTTTTTATCGTTCC-CTATCGA-TCGACCGCTAT---------------------------------------TATCGTA-----------------------------------GA--AGCG---------------GT--GTACT------------------------AGACATCTGCATGAGTGGCGA--AAAAGGCACATTCAAATGCACAATGCCGAAA---------ATGAATGGAATGAGAATGAAAGCAAAGTCAAACTGGTATGAGTGAGTGAGT--------------------GAATTTACGTACGA----------CTCAGTCGCACAACAACGAA-ACAGATGGAAATGAACTGAATGGAATGAGAACACAGTAAATTG--AGACGCT-TCATTCGAATG-ATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................TGAAAGCAAAGTCAAACTGGTATGAGT.............................................................................................................................................27445.0018004711580050005
..............................................................................................................................................................................................................................................................................................T--------------------GAATTTACGTACGA----------CTCAGTCGCA...............................................................................25412.75510132990000000
............................................................................................................................................................................................................................................................TGAAAGCAAAGTCAAACTGGTATGAGC.............................................................................................................................................2748.0032003200000000
.................................................................................................................................................................................................................................................TGGAATGAGAATGAAAGCAAAGTCAAAC.......................................................................................................................................................2848.0032003200000000
............................................................................................................................................................................................................................................................TGAAAGCAAAGTCAAACTGGTATGAG..............................................................................................................................................2647.00280181000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATTG--AGACGCT-TCATTCGAATG-ATT2536.0018011000000016
....................................................................................................................................................................................................................................................................................................................................................................................................TAAATTG--AGACGCT-TCATTCGAATG-A..2635.331604210000009
....................................................................................................................................................................................................................................................................................................................................................................................................TAAATTG--AGACGCT-TCATTCGAATG-ATT2835.001506900000000
......................................................................................................................................................................................................................................................TGAGAATGAAAGCAAAGTCAAACTGG....................................................................................................................................................2643.5014041000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AATTG--AGACGCT-TCATTCGAATG-ATT2633.3310001000000000
....................................................................................................................................................................................................................TGCACAATGCCGAAA---------ATGAATGGAAT.............................................................................................................................................................................2643.251301600000006
.............................................................................................................................................................................................................................................TGAATGGAATGAGAATGAAAGCAAAGTC...........................................................................................................................................................2842.7511001100000000
......................................................................................................................................................................................................................................................TGAGAATGAAAGCAAAGTCAAACTGGT...................................................................................................................................................2742.7511001100000000
...............................................................................................................................................................................................................................GAAA---------ATGAATGGAATGAGAATGAAAGC.................................................................................................................................................................2742.7511001100000000
....................................................................................................................................................T------------------------AGACATCTGCATGAGTGGCGA--AAAAGGA.........................................................................................................................................................................................................................2942.7511000000000011
.........................................................................................................................................................................................................................................................................................................................................................................................TGAGAACACAGTAAATTG--AGACG..................2322.50500000000005
...................................T---------------------------------------TATCGTA-----------------------------------GA--AGCG---------------GT--GTACT------------------------AGACATC................................................................................................................................................................................................................................................2822.50501300010000
......................................................................................................................................................................................................................................................................................TGAGTGAGT--------------------GAATTTACGTACGA----------CT.......................................................................................2532.33702500000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AAATTG--AGACGCT-TCATTCGAATG-ATT2732.33701600000000
..........................................................................................................................................................................................................................................................................................TGAGT--------------------GAATTTACGTACGA----------CTCAGT...................................................................................2542.25905300100000
........................................................................................................................................................................................................................................................................................................................TACGTACGA----------CTCAGTCGCACAACAAC........................................................................2642.00800200000006
..................................................................................................................................................................................TCTGCATGAGTGGCGA--AAAAGGCACA......................................................................................................................................................................................................................2642.00806200000000
..............................................................................................................................................................................................................................................................................................T--------------------GAATTTACGTACGA----------CTCAGTCGCACA.............................................................................2742.00804400000000
............................................................................................................................................................................................................................................................................................................................................TCAGTCGCACAACAACGAA-ACAGATG.............................................................2642.00800100000007
............................................................................................................................................................................................................................................................TGAAAGCAAAGTCAAACTGGTATGA...............................................................................................................................................2541.75706010000000
....................................................................................................................................................................................................................................................................................................................................................................................................TAAATTG--AGACGCT-TCATTCGAATG-AT.2731.67501000000004
............................................................................................................................................................................................................................................................................................AGT--------------------GAATTTACGTACGA----------CTCAGTCGCA...............................................................................2741.25501400000000
....................................................................................................................................................................................TGCATGAGTGGCGA--AAAAGGCACATT....................................................................................................................................................................................................................2641.25503110000000
......................................................................................................................................................................................................................................................TGAGAATGAAAGCAAAGTCAAAC.......................................................................................................................................................2341.25500500000000
............................................................................................................................................................................................................................................................TGAAAGCAAAGTCAAACTGGTATG................................................................................................................................................2441.25503200000000
....................................................................................................................................................................................................................TGCACAATGCCGAAA---------ATGAA...................................................................................................................................................................................2041.25500500000000
..........................................................................................................................................................................................................................................................................................TGAGT--------------------GAATTTACGTACGA----------CTCAGTCGCA...............................................................................2941.00400400000000
...........................................................................................................................................................................................................................................................................................................................................................................TGAACTGAATGGAATGAGAACACAGT...............................2611.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGGAAATGAACTGAATGGAATGAGAA.....................................2611.00101000000000
..................................................................................................................................................................................TCTGCATGAGTGGCGA--AAAAGGCACATT....................................................................................................................................................................................................................2841.00403100000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTG--AGACGCT-TCATTCGAATG-ATT2431.00302100000000
...........................................................................................................................................................................................................................TGCCGAAA---------ATGAATGGAATGAGAA........................................................................................................................................................................2441.00402200000000
....................................................................................................................................................................................................................................................................................................................................................................................................TAAATTG--AGACGCT-TCATTCGAATG-ATC2831.00300300000000
.............................................................................................................................................................................................................................................................GAAAGCAAAGTCAAACTGGTATGAGT.............................................................................................................................................2640.75302000000001
...................................................................................................................................................................................................................................................GAATGAGAATGAAAGCAAAGTCAAAC.......................................................................................................................................................2640.75300300000000
...............................................................................................................................................................................................................................................................................................................................................................................................CACAGTAAATTG--AGACGCT-TCATT..........2430.67201100000000
......................................................................................................................................................................................................................................................................................................................................................................................................AATTG--AGACGCT-TCATTCGAATG-ATC2630.67200200000000
........................................................................................................................................................................................................................................................................................................................TACGTACGA----------CTCAGTCGCACAACAACGA......................................................................2840.50202000000000
...............................................................................................................................................................................ACATCTGCATGAGTGGCGA--AAAAGGC.........................................................................................................................................................................................................................2640.50200200000000
......................................................................................................................................................................................................................................................TGAGAATGAAAGCAAAGTCAAACTGGTA..................................................................................................................................................2840.50201100000000
............................................................................................................................................................................................................................................ATGAATGGAATGAGAATGAAAGCAAAG.............................................................................................................................................................2740.50202000000000
..........................................................................................................................................................................................................CACATTCAAATGCACAATGCCGAAA---------A.......................................................................................................................................................................................2640.50201100000000
..............................................................................................................................................................................................................................................................................................T--------------------GAATTTACGTACGA----------CTCAGTCGCAC..............................................................................2640.50200200000000
............................................................................................................................................................................................................................................................................................................................................TCAGTCGCACAACAACGAA-ACAGATGG............................................................2740.50201100000000
...................................T---------------------------------------TATCGTA-----------------------------------GA--AGCG---------------GT--GTACT------------------------AGACA..................................................................................................................................................................................................................................................2620.50101000000000
......................................................................................................................................................................................................................................................TGAGAATGAAAGCAAAGTCAAACTGGC...................................................................................................................................................2740.50200200000000
.....................................................................................................................................................................................GCATGAGTGGCGA--AAAAGGCACATT....................................................................................................................................................................................................................2540.50202000000000
...........................................................................................................................................................................................................................................................................................GAGT--------------------GAATTTACGTACGA----------CTCAGT...................................................................................2440.50202000000000
.................................................................................................................................................................................................................................................................................................................................................CGCACAACAACGAA-ACAGATGGAAA.........................................................2540.50200200000000
...........................................................................................................................................................................................................................TGCCGAAA---------ATGAATGGAATGAGAAT.......................................................................................................................................................................2540.50200200000000
...............................................................................................................................................................................................................................................AATGGAATGAGAATGAAAGCAAAGTC...........................................................................................................................................................2640.50200200000000
............................................................................................................................................................................................................................................................................................................................TACGA----------CTCAGTCGCACAACAACGAA-ACA.................................................................2840.50201100000000
....................................................................................................................................................................................................................................................AATGAGAATGAAAGCAAAGTCAAAC.......................................................................................................................................................2540.50200200000000
.....................................................................................................................................................................................................AAAGGCACATTCAAATGCACAATGCC.....................................................................................................................................................................................................2640.50200200000000
.............................................................................................................................................................................................................................................................GAAAGCAAAGTCAAACTGGTATGAG..............................................................................................................................................2540.50202000000000
..............................................................................................................................................................................................................TTCAAATGCACAATGCCGAAA---------ATGAATG.................................................................................................................................................................................2840.50202000000000
................................................................................................................................................................................................................................................................................................................................................TCGCACAACAACGAA-ACAGATGGA...........................................................2440.50200200000000
...........................................................................................................................................................................................................................TGCCGAAA---------ATGAATGGAATGAGAATG......................................................................................................................................................................2640.50200100100000
.................................................................................................................................................................................................................................AA---------ATGAATGGAATGAGAATGAAAGC.................................................................................................................................................................2540.50200200000000
............................................................................................................................................................................................TGGCGA--AAAAGGCACATTCAAATGCA............................................................................................................................................................................................................2640.50202000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATTG--AGACGCT-TCATTCGAATG-A..2330.33101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CACAGTAAATTG--AGACGCT-TCATTCGAA......2830.33101000000000
......................................................................................................................................................................................................................................................................................TGAGTGAGT--------------------GAATTTACGTACGA----------C........................................................................................2430.33100010000000
......................................................................................................................................................................................................................................................................................................................................................................................................AATTG--AGACGCT-TCATTCGAATG-A..2430.33100010000000
....................................................................................................................................................................................................................................................................................................................................................................................................TAAATTG--AGACGCT-TCATTCGAATG-...2530.33101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TG--AGACGCT-TCATTCGAATG-ATT2330.33100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TAAATTG--AGACGCT-TCATTCGAA......2330.33100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................CACAGTAAATTG--AGACGCT-TCATTC.........2530.33101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AAATTG--AGACGCT-TCATTCGAATG-ATC2730.33100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AAATTG--AGACGCT-TCATTCGAATG-AT.2630.33101000000000
.............................................................................................................................................................................................................................................TGAATGGAATGAGAATGAAAGCAAAGC............................................................................................................................................................2740.25100100000000
.................................................................................................................................................................................................................................................................GCAAAGTCAAACTGGTATGAGT.............................................................................................................................................2240.25100100000000
.............................................................................................................................................................................................................................................TGAATGGAATGAGAATGAAAGCAAAGT............................................................................................................................................................2740.25100100000000
....................................................................................................................................................T------------------------AGACATCTGCATGAGTGGCGA--AAAA............................................................................................................................................................................................................................2640.25101000000000
................................................................................................................................................................................................................CAAATGCACAATGCCGAAA---------ATGAATG.................................................................................................................................................................................2640.25100100000000
....................................................................................................................................................................................................AAAAGGCACATTCAAATGCACAATGCC.....................................................................................................................................................................................................2740.25101000000000
...............................................................................................................................................................................................CGA--AAAAGGCACATTCAAATGC.............................................................................................................................................................................................................2240.25100100000000
.................................................................................................................................................................................................................................................TGGAATGAGAATGAAAGCAAAGTCAAACT......................................................................................................................................................2940.25100100000000
..........................................................................................................................................................................................................................................................................................TGAGT--------------------GAATTTACGTACGA----------CTCAGTCGCC...............................................................................2940.25100100000000
............................................................................................................................................................................................................................................................................................................................................TCAGTCGCACAACAACGAA-ACAGATGGA...........................................................2840.25101000000000
...............................................................................................................................................................................................................................................................................................................................GA----------CTCAGTCGCACAACAACGAA-ACAGA...............................................................2740.25100100000000
......................................................................................................................................................................................................................CACAATGCCGAAA---------ATGAATGGAATGA...........................................................................................................................................................................2640.25100100000000
...................................................................................................................................................................................................................................................................................................................GAATTTACGTACGA----------CTCAGT...................................................................................2040.25100100000000
...............................................................................................................................................................................................................TCAAATGCACAATGCCGAAA---------ATGAA...................................................................................................................................................................................2540.25101000000000
...................................................................................................................................................................................................................................................................................................................GAATTTACGTACGA----------CTCAGTCGCACA.............................................................................2640.25101000000000
..................................................................................................................................................................................TCTGCATGAGTGGCGA--AAAAGGCAC.......................................................................................................................................................................................................................2540.25100100000000
.........................................................................................................................................................................................................................................................................................................................ACGTACGA----------CTCAGTCGCACAACAACG.......................................................................2640.25101000000000
..................................................................................................................................................................................TCTGCATGAGTGGCGA--AAAAGGCA........................................................................................................................................................................................................................2440.25101000000000
.................................................................................................................................................................................................................................................TGGAATGAGAATGAAAGCAAAGTC...........................................................................................................................................................2440.25100100000000
..................................................................................................................................................................................TCTGCATGAGTGGCGA--AAAAGGC.........................................................................................................................................................................................................................2340.25100100000000
.................................................................................................................................................................................................A--AAAAGGCACATTCAAATGCACAATGC......................................................................................................................................................................................................2740.25100100000000
.....................................................................................................................................................................................................................................................................................................................................................CAACAACGAA-ACAGATGGAAATGAA.....................................................2540.25101000000000
.....................................................................................................................................................................................................................................................ATGAGAATGAAAGCAAAGTCAAACC......................................................................................................................................................2540.25100100000000
....................................................................................................................................................................................TGCATGAGTGGCGA--AAAAGGC.........................................................................................................................................................................................................................2140.25100100000000
.......................................................................................................................................................................................................................................................................................................................TTACGTACGA----------CTCAGTCGCA...............................................................................2040.25100100000000
............................................................................................................................................................................................................CATTCAAATGCACAATGCCGAAA---------ATGAA...................................................................................................................................................................................2840.25100100000000
.............................................................................................................................................................................................................................................TGAATGGAATGAGAATGAAAGC.................................................................................................................................................................2240.25100100000000
..............................................................................................................................................................................................................................................................AAAGCAAAGTCAAACTGGTATGAGT.............................................................................................................................................2540.25100100000000
....................................................................................................................................................T------------------------AGACATCTGCATGAGTGGCGA--AAAAG...........................................................................................................................................................................................................................2740.25101000000000
................................................................................................................................................................................................................................................................................................................................................TCGCACAACAACGAA-ACAGATGGAA..........................................................2540.25101000000000
...................................................................................................................................................................................CTGCATGAGTGGCGA--AAAAGGCACAT.....................................................................................................................................................................................................................2640.25101000000000
..............................................................................................................................................................................GACATCTGCATGAGTGGCGA--AAAAGG..........................................................................................................................................................................................................................2640.25101000000000
.............................................................................................................................................................................................................................................................................................GT--------------------GAATTTACGTACGA----------CTC......................................................................................1940.25100100000000
..........................................................................................................................................................................................................CACATTCAAATGCACAATGCC.....................................................................................................................................................................................................2140.25100100000000
.............................................................................................................................................................................................................................................................................................................................................CAGTCGCACAACAACGAA-ACAGATGGA...........................................................2740.25100000000001
..............................................................................................................................................................................................................................................................................................................................................AGTCGCACAACAACGAA-ACAGATGGA...........................................................2640.25101000000000
................................................................................................................................................................................................................................................ATGGAATGAGAATGAAAGCAAAGTCAAAC.......................................................................................................................................................2940.25100100000000
....................................................................................................................................................................................................................TGCACAATGCCGAAA---------ATGAATGG................................................................................................................................................................................2340.25100100000000
....................................................................................................................................................................................................................TGCACAATGCCGAAA---------ATGAATGGAATGAA..........................................................................................................................................................................2940.25100100000000
.............................................................................................................................................................................AGACATCTGCATGAGTGGCGA--AAAAGG..........................................................................................................................................................................................................................2740.25100100000000
......................................................................................................................................................................................................................................................................................................................TTTACGTACGA----------CTCAGTCGCACAACAAC........................................................................2840.25100100000000
..................................................................................................................................................................................................................AATGCACAATGCCGAAA---------ATGAATGG................................................................................................................................................................................2540.25100100000000
....................................................................................................................................................................................TGCATGAGTGGCGA--AAAAGGCACATTC...................................................................................................................................................................................................................2740.25101000000000
.......................................................................................................................................................................................................................................................................................................................TTACGTACGA----------CTCAGTCGCACA.............................................................................2240.25101000000000
.............................................................................................................................................................................................................................................................GAAAGCAAAGTCAAACTGGTATG................................................................................................................................................2340.25100100000000
................................................................................................................................................................................................GA--AAAAGGCACATTCAAATGCACAATGC......................................................................................................................................................................................................2840.25100100000000
................................................................................................................................................................................CATCTGCATGAGTGGCGA--AAAAGGCACA......................................................................................................................................................................................................................2840.25101000000000
................................................................................................................................................................................................................CAAATGCACAATGCCGAAA---------ATGAATGG................................................................................................................................................................................2740.25100100000000
...........................................................................................................................................................................................................................................................................................GAGT--------------------GAATTTACGTACGA----------CTCAGTCGCA...............................................................................2840.25101000000000
...........................................................................................................................................................................................................................TGCCGAAA---------ATGAATGGAATGAGA.........................................................................................................................................................................2340.25101000000000
........................................................................................................................................................................................................................................................................................AGTGAGT--------------------GAATTTACGTACGA----------CTCAGT...................................................................................2740.25101000000000
.............................................................................................................................................................................................................................................TGAATGGAATGAGAATGAAAGCAAAG.............................................................................................................................................................2640.25101000000000
..................................................................................................................................................................................................................AATGCACAATGCCGAAA---------ATGAATGGAA..............................................................................................................................................................................2740.25101000000000
......................................................................................................................................................................................................................CACAATGCCGAAA---------ATGAATGGAATG............................................................................................................................................................................2540.25100100000000
...............................................................................................................................................................................................................................................................................................................................................GTCGCACAACAACGAA-ACAGATGGA...........................................................2540.25100100000000
......................................................................................................................................................................................................................................................TGAGAATGAAAGCAAAGTCAAACT......................................................................................................................................................2440.25100100000000
................................................................................................................................................................................................................................................................................................................................................TCGCACAACAACGAA-ACAGATGGAAAT........................................................2740.25100100000000
.....................................................................................................................................................................................................................................................................................................................................................CAACAACGAA-ACAGATGGAAATGA......................................................2440.25100100000000
...................................................................................................................................................................................................................................................................................................................GAATTTACGTACGA----------CTCAGTCGCA...............................................................................2440.25101000000000
..................................................................................................................................................................................TCTGCATGAGTGGCGA--AAAAGGCACAT.....................................................................................................................................................................................................................2740.25101000000000
................................................................................................................................................................................................................................................................................................................................................TCGCACAACAACGAA-ACAGATGG............................................................2340.25101000000000
....................................................................................................................................................................................................AAAAGGCACATTCAAATGCACAATGC......................................................................................................................................................................................................2640.25100100000000
..................................................................................................................................................................................................................................A---------ATGAATGGAATGAGAATGAAAGCAAAG.............................................................................................................................................................2840.25100100000000
................................................................................................................................................................................................................................................................................................................................A----------CTCAGTCGCACAACAACGAA-ACAGA...............................................................2640.25100100000000
..............................................................................................................................................................................................................TTCAAATGCACAATGCCGAAA---------ATG.....................................................................................................................................................................................2440.25101000000000
..............................................................................................................................................................................GACATCTGCATGAGTGGCGA--AAAAGGC.........................................................................................................................................................................................................................2740.25100100000000
....................................................................................................................................................T------------------------AGACATCTGCATGAGTGGCGA--AAAAA...........................................................................................................................................................................................................................2740.25100100000000
...........................................................................................................................................................................................................................................................................................................................................CTCAGTCGCACAACAACGAA-ACAGA...............................................................2540.25101000000000
............................................................................................................................................................................................................................................................................................AGT--------------------GAATTTACGTACGA----------CTCAGTCGCACA.............................................................................2940.25100100000000
...........................................................................................................................................................................................................................TGCCGAAA---------ATGAATGGAATGAGAATA......................................................................................................................................................................2640.25100100000000
..................................................................................................................................................................................................................................................GGAATGAGAATGAAAGCAAAGTCAAACT......................................................................................................................................................2840.25100100000000
...........................................................................................................................................................................................................................TGCCGAAA---------ATGAATGGAATGAGAATGAA....................................................................................................................................................................2840.25100100000000
........................................................................................................................................................................................................................................................................................................................TACGTACGA----------CTCAGTCGCACAACAACG.......................................................................2740.25101000000000
................................................................................................................................................................................................................................AAA---------ATGAATGGAATGAGAATGAAAGC.................................................................................................................................................................2640.25100100000000
........................................................................................................................................................................................TGAGTGGCGA--AAAAGGCACATTCAAA................................................................................................................................................................................................................2640.25101000000000
....................................................................................................................................................................................................................TGCACAATGCCGAAA---------ATGAATGGAATG............................................................................................................................................................................2740.25100100000000
...........GTTCC-CTATCGA-TCGACCGCTA.................................................................................................................................................................................................................................................................................................................................................................................................2260.17101000000000
.............TCC-CTATCGA-TCGACCGCTAT---------------------------------------TATCG....................................................................................................................................................................................................................................................................................................................................................2660.17101000000000
.................CTATCGA-TCGACCGCTAT---------------------------------------.........................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
..................TATCGA-TCGACCGCTAT---------------------------------------TATC.....................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
....................TCGA-TCGACCGCTAT---------------------------------------.........................................................................................................................................................................................................................................................................................................................................................15200.05100000000001
droEre2
GAG-----------------------------------------------------------------------------------------------------------------------TGC---------------AC--GGAAC------------------------CGAAAACTGCTCAAAAAAAAA--AAAAAAAACAGGAAAATG------------------------------------------------------------------------------------------------------------------------------------------------------------GGTACA---------GGGAAAGTACAGGGAAATT-CAACTTTAAGG-CGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 08:20 PM