ID:

dvi_14101

 Coordinate:

scaffold_13036:1087347-1087497 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_14704:2]; CDS [Dvir\GJ14633-cds]; intron [Dvir\GJ14633-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAACACAGCGACGGCAAATTCTGGCGTGGAATCCAACGGATGCGGAGGAGGGGAACAATTGCTTAATCGCAGCGAGCCGAGCGCTGATTTACGCAAGAAGTTTCAGTCGCGTGCTCTGGCGCCATTGCCAAAGAAAGGTTCGTGTATGGTCCAATGATTGACGTAATTGTATTCAATTGTATGCGCCAATTGCTTTTCAGCTTATGCCATTGACGCCGCCGAAACGGAGCCGAAGGAGCAAAAGAAGAGC
**************************************************.....(((((((((((((((..((((((((((((((((((...((.....))...))))).))))))((((......))))......)))))))...........))))))).))))))))...((((((.......))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060657
140_testes_total
 SRR060687
9_0-2h_embryos_total
 V047
embryo
 M047
female body
 M027
male body		 M061
embryo
 SRR060672
9x160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
................................TCCAACGGATGCGGAGGAG........................................................................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................GCTTATGCCATTGACGCCGC............................... 20 0 2 0.50 1 0 0 1 0 0 0 0 0
............................................................................................................................ATTACCAAAGAAAGGTTCC............................................................................................................ 19 2 2 0.50 1 0 1 0 0 0 0 0 0
.................AGTTCTGGCGGGGAAGCCA....................................................................................................................................................................................................................... 19 3 7 0.29 2 0 0 0 2 0 0 0 0
...............................................................................................................................................TCTACGGTCCAAAGATTGAC........................................................................................ 20 3 4 0.25 1 0 0 0 0 1 0 0 0
.....................................................................................................................................GAAAGGTTGGTGGTTGGTCC.................................................................................................. 20 3 5 0.20 1 0 0 0 0 0 1 0 0
..................GTTCTGGCGGGGAAGCCA....................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0
.....................................CGGGTACGGACGAGGGGA.................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0
...........................................................................................................................................................TGATTGACGTCAGTGTACT............................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTTTGTGTCGCTGCCGTTTAAGACCGCACCTTAGGTTGCCTACGCCTCCTCCCCTTGTTAACGAATTAGCGTCGCTCGGCTCGCGACTAAATGCGTTCTTCAAAGTCAGCGCACGAGACCGCGGTAACGGTTTCTTTCCAAGCACATACCAGGTTACTAACTGCATTAACATAAGTTAACATACGCGGTTAACGAAAAGTCGAATACGGTAACTGCGGCGGCTTTGCCTCGGCTTCCTCGTTTTCTTCTCG
**************************************************.....(((((((((((((((..((((((((((((((((((...((.....))...))))).))))))((((......))))......)))))))...........))))))).))))))))...((((((.......))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 SRR060665
9_females_carcasses_total
 M047
female body
 V047
embryo
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR1106728
larvae
 SRR060676
9xArg_ovaries_total
......................................................TTGTTTCCGAATTAGAGTCGC................................................................................................................................................................................ 21 3 3 1.33 4 0 0 1 0 0 1 0 1 1 0 0 0 0 0
......................................................TTGTTTCCGAATTAGCGTCG................................................................................................................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGGCGGCTTTGCCTCGGCTTCCTCG........... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................TTGTTTCCGAATTAGCGTCGT................................................................................................................................................................................ 21 3 3 0.67 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0
..................................................................TAGCGTCGCTCCGCACGCCACT................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ACCAGGTTACTAGCTTCA...................................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
......................................................TTGTTACCGAATTAGAGTCGT................................................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................GTTCTTCAAAGTCAGAGTA.......................................................................................................................................... 19 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTCGGCTTCCCCTTTTT....... 17 2 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2 0 0
..........................................................................................................................................CCAGCTCAGACCAGGTTAC.............................................................................................. 19 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................GACCGCGGTAACCGTTTC..................................................................................................................... 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_13036:1087297-1087547 - dvi_14101 CAAAC------A------------CAGCGACGG------------------CAAATTCT------GGCGTGG-AATCCAACGGAT-------------------------------------------------------GC---------GGAGGAGGGG---AACAATT---------G-CTTAATCGCA-------------GCGAGCCGAGCGCTGATTTACGCAAGAAGTTTCAGTCGCGTGCTCTGGCGCCATTGCCAAAGAAAGGTTCGTGTATG-------------GTC---------C-AAT----GATTGACGTAATTGTA----------------------------------------------------------------T---------------------------------------TC--AA-TTGTATGCGCCAATTGC--------------TTTTCAGCTTATGCCATTGAC---GCCGCCG------AAACGGAGCCGAAGGAGCAAAAGAAGAGC
droMoj3 scaffold_6473:14433514-14433746 - CCACG---------------------------------------------------ACAGAT---GCCGCCG-AT-----------------------------------------------------------------GC---------GGAGGAGGCTAATAATCAGT---------GTCTCAGCCGCA-------------GCGAGCCCAGCGCCGATCTGCGCAAAAAGTTTCAATCGCGCGCTTTGCCGCCGCTGCCACGAAAAGGTGAGCTGGCA-------------TCT--------T--CTA-TG-GA--GT-----------------------GATTGGAGTCACTTT------------------------------------AATC-----CTCT-G-----------------------------AT-GCA--CT---------C--------------TTTACAGCTTATGCCATTGAT---GCCGCCG------AAGCGGAGCCGGAGGAGCAGAAGAAGAGC
droGri2 scaffold_14853:6731211-6731466 + CAACAA------------------CAACAGC-----------------------AGCCAGTTG--TGCGGTG-AATGC--------------------TGCAACGGAT--------------------------------GT---------GGAGGAGGTGATGAACAATT---------GTCTCAATCGTA-------------TCGAGCCGAGTGCCGATCTGCGTAAGAAATTTCAATCTCGAGCGTTGCCGCCATTGCCAAAAAAGGGTGAGTCAAAAATATATCAAAAATGCC---------ACCG-----AA-------------------------------------T----------A-CCCCAAAA-----------------------------------CCCATTTAA-TCTG---------ATCCGATTTGTA--CA---------C--------------TCGCCAGCTTATGCCATTGAT---GCCGCCG------AAACGGAGCCGGA----------------
droWil2 scf2_1100000004909:3993425-3993713 + CAACGG------------------CGG---CGGC----------------ATAAACTCC------TCCAATAGCA--------TC------------TTGGACGC--C--------------------------------AC---------AGAGGAGGCCACCCACAATT---------GCCTAAATCGCGGCGTCAACGGCG-GAGAACTGAATGCAGATTTGCGTAAAAAGTTTCAGTCGCGTGCCTTGCCGCCCCTACCAAAGAAAGGTAAAGAAAAA-------------ATT--------T--TAT----TTCATTTGATCAACTC-----------------------ACCTTAGA------------------------------------C-----A----TTTCATTTAA-TTTC--------ATTTC-ATT-TAA--------------------------CAGCAGCAGCCTATGCTATAGAT---GCTATCTCAACCGAGTCAGAGCAGGATCAGCTAAAGAAAAAC
dp5 XL_group1e:12030213-12030517 + CTGTGGAAGCAACTGCTGTGGCTGCTG---AGGG----------------CCAGGACCAGGAGTC---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCACAGCAACACCAGCCACCGCCCCAGG---GGAGTCATCGTCCGATGAGGGACTCAAGAAGTTCCAGTCGCGTGCACTGCCACCATTACCAAAGAAGGGTAAATAAATG-------------ACAC-------C--TA-CT---CCTGCCCAC-------------------------------------AGAATCTCTAAAACATTTGCCTCCTCCTT----TATT-----TTCC-T-----------------------------TT-CC------TCTACTTGCGCTTCTTTCAAGCAGCAGCCGCCTATGCCATAGATGAAGCTGTCGAA--C-AACCCGAACAGGAGGA--------TCAAC
droPer2 scaffold_14:1580559-1580866 - CAGTGGAAGCAACTGCTGTGGCTGCTG---AGGG----------------CCAGGACCAGGAGTC---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCACAGCAACACCAGCCACCGCCCCAGG---GGAGTCATCGTCCGATGAGGGACTCAAGAAGTTCCAGTCGCGTGCACTGCCACCATTACCAAAGAAGGGTAAATAAATG-------------ACAC-------A--TA-CT---CCTGCCC---------------------------------------AGAGTCTCTAAAAGATTTGCCTCCTCCTTTCTTTTCC-----TTTCCTTTCC------------------------------------TCTACTCGCGTTTCTTTCAAGCAGCAGCCGCCTATGCCATAGAAGAAGCTGTCGAA--C-AACCCGAACAGGAGGA--------TCAAC
droAna3 scaffold_13335:399526-399842 - CAG---------------------------------------------------ACGCAACTG--GTCACGG-AACTGAAGGATGTTGGCGGTGTTGCTGGTG-----GACCGGGATGTGCTGCCGGACCGGGCGGTGTT--GCAGGAGGTGGAGGAG--------------------GAGTTCTTATCACGGCGGAGGC---CGACGAAACGAATGCCGATTTGCGCAAAAAGTTTCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGTAGGGTTTTG-------------TTTT-------T--TTT----TATTGAAAATAAAGT----GTTA----------------------------------AGA-----------------------------------TCCTTTTAA-TCTCTAATC---CTTGA-ATCCCCA--------------------------CAGCTGCAGCCTATGCCATTGAA---TCTGTTG------AACCGGAGCCGGAGGAGCAGAAGAAGAAC
droBip1 scf7180000396484:14891-15189 + CGGAC------AAC---CTG-----------------------------------GACAATTG--ATCGCGG-AACTGAAGGATG------------CTGGAG-----GACCGGGATGTGCAGCCGGGGCTGGCGGAATC--GGGGGAGCTGGAGGAG--------------------GAGTTCTGATCACGGCGGAGGC---CGACGAAACAAATGCCGATCTGCGCAAAAAGTTTCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTAAGGCTTC----------------T--------G---GG----AA-----------------TTAG--AGTTGA-----------------GAGAA------A-------------------TCCG---------------------ATGT--TAACTTTGAACC-CTT-TTG--------------------------TAGCTGCAGCCTATGCCATTGAA---TCTGTTG------ATCCGGAGCCGGAGGAGCTGAAGAAGAAC
droKik1 scf7180000302696:245078-245271 - CAGCTGG----------------TCAGCAACAGCAACTGCTGCTGACCCAGCAACTACAGCTG--GCCACCG-AGCTAAACGTCGGCGGCGG------TG----------------------------------------GAGGAGGA---GGAGGAG------GAG-----------CGGTGTTAGCCACGGCGGAAGC---GGACGAAACGAATGCCGATCTGCGGAAGAAGTTTCAGTCGCGTGCCCTGCCACCACTACCAAAGAAGGGTAAGTAGATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453915:13395-13641 + CTAGC---------GCTCCG------G---CGGC----------------CCAGGCTCAGCTG--GCTGGTG-AACTGAGCG----------------------------------------------------------------------GAGGTG--------------------GAGCGCCGATCACGGCGGACGC---TGACGAACCGAGCGCGGATCTGCGCAAGAAGTTTCAGTCGCGCGCCCTGCCACCATTACCAAAGAAGGGTGAGTAT-T--------------GCC---------GCCC-----AA-------------------------------------TTAGAGGATGCGTC-------------------------TTTAGCGCCAGTCT-------------TGT-----T---A--TT-CCT-TCA--------------------------CAGCTGCAGCCTATGCCGTTGAA---GCCACCA------AATCGGAATTGGAGGA------------C
droEle1 scf7180000490982:172434-172577 + CAG---------------------------------------------------GCCCAGCTG--GCCACCG-AACTGAATGGCGGGAAT------------GGC--C--------------------------------TG---------GGAGGAG--------------------GAGCATTGATCGCGGCAGAGGCGTCGGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779481:84792-85042 + CAA---------------------------------------------------ACCCAGTTG--GCCACCG-AACTGAACGGCGGCGTT----------------------------------------------------------------GGCG--------------------GGACGTTGATCACGGCGGAAGC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTATGCT-------AG---TG-GC-------T--TG-GC---AC------------------------------------TGCTTAGATGAACC-------------------------TCTAATGGCAGT-----------------CC--------A-TCC-CTT-CAA--------------------------CAGCTGCAGCCTATGCCATTGAA---GCCGTGA------AACCGGAACCGGAGGAGCCCAAGACGAAC
droBia1 scf7180000301760:3739661-3739904 - CAA---------------------------------------------------ACGCAGCTG--GCCACCG-AAGTGAACGGCGGCGGC-------------------------------------------------------------GGAGGAG--------------------GAGCGTCCACCACGGCGGAAGC---GGAGGAACCCAGTGCCGATCTGCGCAAGAAGTTCCAGTCGCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGTAGT-------------GCC---------CCCT---------------------------------------------------------CTCTAAAAGC------------GGTCTTTACC-----TTTC-G------------T-----T-------G-TCC-CCC--------------------------TAGCTGCGGCCTATGCCATTGAA---GCCGTTA------AATCGGAAGCGGAGGAGCTGAAGACGAAC
droTak1 scf7180000415210:292306-292532 + CAA---------------------------------------------------ACGCAGCTG--GCCACCG-AAGTG------------------------------------------------------------------------------------------------------GCGCTAATCACGGCGGAGGC---AGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCACGTGCCCTGCCACCACTACCAAAGAAGGGTAATTAGAAG-------------GTC---------CCTT-ATCCAA--GT---------------------------------------GAAGAGTC-------------------------TCTAA---------------------ATTTT--ATT---TTTG---TC-CCA--------------------------CAGCTGCAGCCTATGCCATTGAA---GCCGTTA------AATCGGAACCCGAGGAGCTGAAGGCGAAC
droEug1 scf7180000408176:970227-970504 + TAACC------AGCGCTCCGGGGGTAG---CAGG----------------ACAAACCCAGCTG--GCCACCG-AACTGAACGGTGTTGGC-------------------------------------------------------------GGAGGAG--------------------GGGCGTTAATCACGGCGGAAGC---GGACGAACCTAATGCCGATCTGCGCAAGAAGTTCCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGTAAGTATT---------------GCC---------CCCTC-TA-AA-------------------------------------TCCGTAGGAGAGTC-------------------------ACTAAAGCCCGG----------------------CC---TTTTC-TAT-CAA--------------------------TAGCAGCAGCCTATGCCATTGAA---GCCATTA------AACCGGAACCAGAGGAGCTAAAGACGAAC
dm3 chrX:17717281-17717542 - CGGGT------------------GCAG---CGGG----------------GCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGGCTGAGGC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGGACG-------------CCTT-------G--CAG----AACTGCTGGTTGTGT----CTAT--AGTTGTCTA----------------------------------------------TA---------------------ATTGTCATAGC---TTTGC-CAT-TCA--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AGTCGGAACCGGAGGAGGTCAAGACGAAT
droSim2 x:16828077-16828332 - TAACC------AGCGCTCCGGGGTCAG---CGGG----------------CCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGCGTTGATTACGGCTGAGTC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGGACG-------------CCT--------G--CAG----AGCTGGCGGTCGTGTAAGTCT--A--------------------------------------------------------TA---------------------ATTGTCATACC---TTTGC-CATCCCA--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AGTCGGAACCGGAGGAG------------
droSec2 scaffold_8:27684-27939 - TAACC------AGCGCTCCGGGGTCAG---CGGG----------------CCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGCGTTGATTACGGCTGAGTC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGGACG-------------CCT--------G--CAG----AACTGGCGGTCGTGTAAGTCT--A--------------------------------------------------------TA---------------------ATTGTCATACC---TTTGC-CATCCCG--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AGTCGGAACCGGAGGAG------------
droYak3 X:16344777-16345030 - CAA---------------------------------------------------ACCCAGCTG--GCCAGCG-AACTGAATG------------------------------------------------------------------------------------------------GGGCGTTAATTACGGCTGAGGC---AGACGAATCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTAGTCG-------------TCTCCGCGCCTC--CTG----AACTGGTCATCTTCCATGCTT--ATAAATGACTA----------------------------------------------TA---------------------A-----ATAAC---TTTAC-CAT-CCA--------------------------CAGCCGCAGCCTATGCCATAGAA---GCCGTCA------AACCGGAGCCGGAGGAGCTCAAGACGAAC
droEre2 scaffold_4690:8053931-8054196 - TAACC------AGCGCTCCGGGGGCAG---CGGG----------------CCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGCGGTAATTACGGCTGAGGC---AGACGAACCAAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTAGTCG-------------GCT--------C--CCA----AACTGGTGATCTTGTATGCCT--A--------------------------------------------------------TA---------------------A-TGTCGTAAT---TTTCC-CAT-CCA--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AACCGGAGCCGGAGGAGGTCAAGGCGAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAAAC------A------------CAGCGACGG------------------CAAATTCT------GGCGTGG-AATCCAACGGAT-------------------------------------------------------GC---------GGAGGAGGGG---AACAATT---------G-CTTAATCGCA-------------GCGAGCCGAGCGCTGATTTACGCAAGAAGTTTCAGTCGCGTGCTCTGGCGCCATTGCCAAAGAAAGGTTCGTGTATG-------------GTC---------C-AAT----GATTGACGTAATTGTA----------------------------------------------------------------T---------------------------------------TC--AA-TTGTATGCGCCAATTGC--------------TTTTCAGCTTATGCCATTGAC---GCCGCCG------AAACGGAGCCGAAGGAGCAAAAGAAGAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................TCCAACGGAT-------------------------------------------------------GC---------GGAGGAG..............................................................................................................................................................................................................................................................................................................................................................................................1920.501000000010000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATGCCATTGAC---GCCGC.....................................2020.501000000000000000000000000000000000000000000000000000000000001000
droMoj3
CCACG---------------------------------------------------ACAGAT---GCCGCCG-AT-----------------------------------------------------------------GC---------GGAGGAGGCTAATAATCAGT---------GTCTCAGCCGCA-------------GCGAGCCCAGCGCCGATCTGCGCAAAAAGTTTCAATCGCGCGCTTTGCCGCCGCTGCCACGAAAAGGTGAGCTGGCA-------------TCT--------T--CTA-TG-GA--GT-----------------------GATTGGAGTCACTTT------------------------------------AATC-----CTCT-G-----------------------------AT-GCA--CT---------C--------------TTTACAGCTTATGCCATTGAT---GCCGCCG------AAGCGGAGCCGGAGGAGCAGAAGAAGAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................T--------T--CTA-TG-GA--GT-----------------------GATTGGAGTC.........................................................................................................................................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................TA-TG-GA--GT-----------------------GATTGGAGTCAC.......................................................................................................................................................................................2011.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT---GCCGCCG------AAGCGGAGC....................1911.001100000
......................................................................................................................................................................................................................................................................................GGCA-------------TCT--------T--CTA-TG-GA--GT-----------------------GATTGGAGT..........................................................................................................................................................................................2611.001000001
......................................................................................................................................................................................................................................................................................................................TA-TG-GA--GT-----------------------GATTGGAGTC.........................................................................................................................................................................................1811.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................C-----CTCT-G-----------------------------AT-GCA--CT---------C--------------TTTACA............................................................2011.001010000
droGri2
CAACAA------------------CAACAGC-----------------------AGCCAGTTG--TGCGGTG-AATGC--------------------TGCAACGGAT--------------------------------GT---------GGAGGAGGTGATGAACAATT---------GTCTCAATCGTA-------------TCGAGCCGAGTGCCGATCTGCGTAAGAAATTTCAATCTCGAGCGTTGCCGCCATTGCCAAAAAAGGGTGAGTCAAAAATATATCAAAAATGCC---------ACCG-----AA-------------------------------------T----------A-CCCCAAAA-----------------------------------CCCATTTAA-TCTG---------ATCCGATTTGTA--CA---------C--------------TCGCCAGCTTATGCCATTGAT---GCCGCCG------AAACGGAGCCGGA----------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CAACGG------------------CGG---CGGC----------------ATAAACTCC------TCCAATAGCA--------TC------------TTGGACGC--C--------------------------------AC---------AGAGGAGGCCACCCACAATT---------GCCTAAATCGCGGCGTCAACGGCG-GAGAACTGAATGCAGATTTGCGTAAAAAGTTTCAGTCGCGTGCCTTGCCGCCCCTACCAAAGAAAGGTAAAGAAAAA-------------ATT--------T--TAT----TTCATTTGATCAACTC-----------------------ACCTTAGA------------------------------------C-----A----TTTCATTTAA-TTTC--------ATTTC-ATT-TAA--------------------------CAGCAGCAGCCTATGCTATAGAT---GCTATCTCAACCGAGTCAGAGCAGGATCAGCTAAAGAAAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................TAAATCGCGGCGTCAACGGC.................................................................................................................................................................................................................................................................................................................................................2012.00200200
.................................................................TCCAATAGCA--------TC------------TTGGACGC--C--------------------------------................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
......................................................................................................................................................................................CTAAATCGCGGCGTCAACGGCG-GA.............................................................................................................................................................................................................................................................................................................................................2411.00100010
.....................................................................ATAGCA--------TC------------TTGGACGC--C--------------------------------AC---------AGAGG................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.............................................................................................................................................................................................GCGGCGTCAACGGCG-GAGAACT........................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................................................................................................................................................................................TAAATCGCGGCGTCAACGGCG-GAGAACT........................................................................................................................................................................................................................................................................................................................................2811.00101000
.......................................................................................................................................................................................................................................AAGTTTCAGTCGCGTGCCTTGCCGC............................................................................................................................................................................................................................................................................................2511.00100100
............................................................................................................................................AC---------AGAGGAGGCCACCCATG....................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......................................................................................................................................................................................CTAAATCGCGGCGTCAACGGC.................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................................................C--------------------------------AC---------AGAGGAGGCCACCCATGG...................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTCAACCGAGTCAGAGC....................2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAACCGAGTCAGAGCAGGATCAGC...........2811.00100100
...........................................................................................................................................................................................TCGCGGCGTCAACGGCG-GAGAACTGAA.....................................................................................................................................................................................................................................................................................................................................2711.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGAGCAGGATCAGCT..........1911.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATCTCAACCGAGTCAGAGC....................2211.00100010
dp5
CTGTGGAAGCAACTGCTGTGGCTGCTG---AGGG----------------CCAGGACCAGGAGTC---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCACAGCAACACCAGCCACCGCCCCAGG---GGAGTCATCGTCCGATGAGGGACTCAAGAAGTTCCAGTCGCGTGCACTGCCACCATTACCAAAGAAGGGTAAATAAATG-------------ACAC-------C--TA-CT---CCTGCCCAC-------------------------------------AGAATCTCTAAAACATTTGCCTCCTCCTT----TATT-----TTCC-T-----------------------------TT-CC------TCTACTTGCGCTTCTTTCAAGCAGCAGCCGCCTATGCCATAGATGAAGCTGTCGAA--C-AACCCGAACAGGAGGA--------TCAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................C---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCACAG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
................................................................C---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCAC............................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................CAGCCACCGCCCCAGG---GGAGTCATCG.......................................................................................................................................................................................................................................................................................................................................2611.0010010000000
droPer2
CAGTGGAAGCAACTGCTGTGGCTGCTG---AGGG----------------CCAGGACCAGGAGTC---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCACAGCAACACCAGCCACCGCCCCAGG---GGAGTCATCGTCCGATGAGGGACTCAAGAAGTTCCAGTCGCGTGCACTGCCACCATTACCAAAGAAGGGTAAATAAATG-------------ACAC-------A--TA-CT---CCTGCCC---------------------------------------AGAGTCTCTAAAAGATTTGCCTCCTCCTTTCTTTTCC-----TTTCCTTTCC------------------------------------TCTACTCGCGTTTCTTTCAAGCAGCAGCCGCCTATGCCATAGAAGAAGCTGTCGAA--C-AACCCGAACAGGAGGA--------TCAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....GGAAGCAACTGCTGTGGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................TC---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCAC............................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAA--C-AACCCGAACAGGAGGA--------TC...2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--C-AACCCGAACAGGAGGA--------TCAAC2411.001001000
.........................................................................................................................................................................................................................................GTTCCAGTCGCGTGCACTG................................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA--C-AACCCGAACAGGAGG..............1911.001010000
..........................................................................................................................................................................................................................................TTCCAGTCGCGTGCACTGCCACC...........................................................................................................................................................................................................................................................................................2311.001100000
................................................................C---------------------------------------------------------------------------------------------GTCACCAGCAGCAGTCAC............................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droAna3
CAG---------------------------------------------------ACGCAACTG--GTCACGG-AACTGAAGGATGTTGGCGGTGTTGCTGGTG-----GACCGGGATGTGCTGCCGGACCGGGCGGTGTT--GCAGGAGGTGGAGGAG--------------------GAGTTCTTATCACGGCGGAGGC---CGACGAAACGAATGCCGATTTGCGCAAAAAGTTTCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGTAGGGTTTTG-------------TTTT-------T--TTT----TATTGAAAATAAAGT----GTTA----------------------------------AGA-----------------------------------TCCTTTTAA-TCTCTAATC---CTTGA-ATCCCCA--------------------------CAGCTGCAGCCTATGCCATTGAA---TCTGTTG------AACCGGAGCCGGAGGAGCAGAAGAAGAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAA---TCTGTTG------AACCGGAGCCGGAG...............2611.001100000
.............................................................................................GTTGCTGGTG-----GACCGGGATGTGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCCGGAGGAGCAGAAGAAGAA.2411.001100000
.................................................................................GATGTTGGCGGTGTTGCTGGTG-----GACC............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..........................................................................................................................GCCGGACCGGGCGGTGTT--GCA...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTG------AACCGGAGCCGGAGG..............2011.001100000
............................................................................................................................................................................................CACGGCGGAGGC---CGACGAAACGAATGC..................................................................................................................................................................................................................................................................................................................................2711.001000001
.................................................................................................................................................GGAGGTGGAGGAG--------------------GAGTTCT...................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................TGGTG-----GACCGGGATGTGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................GTGCTGCCGGACCGGGCGGTGTT--..............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...................................................................................TGTTGGCGGTGTTGCTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................CGGTGTT--GCAGGAGGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................CACGG-AACTGAAGGATGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
droBip1
CGGAC------AAC---CTG-----------------------------------GACAATTG--ATCGCGG-AACTGAAGGATG------------CTGGAG-----GACCGGGATGTGCAGCCGGGGCTGGCGGAATC--GGGGGAGCTGGAGGAG--------------------GAGTTCTGATCACGGCGGAGGC---CGACGAAACAAATGCCGATCTGCGCAAAAAGTTTCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTAAGGCTTC----------------T--------G---GG----AA-----------------TTAG--AGTTGA-----------------GAGAA------A-------------------TCCG---------------------ATGT--TAACTTTGAACC-CTT-TTG--------------------------TAGCTGCAGCCTATGCCATTGAA---TCTGTTG------ATCCGGAGCCGGAGGAGCTGAAGAAGAACSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCTGG----------------TCAGCAACAGCAACTGCTGCTGACCCAGCAACTACAGCTG--GCCACCG-AGCTAAACGTCGGCGGCGG------TG----------------------------------------GAGGAGGA---GGAGGAG------GAG-----------CGGTGTTAGCCACGGCGGAAGC---GGACGAAACGAATGCCGATCTGCGGAAGAAGTTTCAGTCGCGTGCCCTGCCACCACTACCAAAGAAGGGTAAGTAGATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTAGC---------GCTCCG------G---CGGC----------------CCAGGCTCAGCTG--GCTGGTG-AACTGAGCG----------------------------------------------------------------------GAGGTG--------------------GAGCGCCGATCACGGCGGACGC---TGACGAACCGAGCGCGGATCTGCGCAAGAAGTTTCAGTCGCGCGCCCTGCCACCATTACCAAAGAAGGGTGAGTAT-T--------------GCC---------GCCC-----AA-------------------------------------TTAGAGGATGCGTC-------------------------TTTAGCGCCAGTCT-------------TGT-----T---A--TT-CCT-TCA--------------------------CAGCTGCAGCCTATGCCGTTGAA---GCCACCA------AATCGGAATTGGAGGA------------CSizeHit CountTotal NormTotal
No Reads
droEle1
CAG---------------------------------------------------GCCCAGCTG--GCCACCG-AACTGAATGGCGGGAAT------------GGC--C--------------------------------TG---------GGAGGAG--------------------GAGCATTGATCGCGGCAGAGGCGTCGGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAA---------------------------------------------------ACCCAGTTG--GCCACCG-AACTGAACGGCGGCGTT----------------------------------------------------------------GGCG--------------------GGACGTTGATCACGGCGGAAGC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTATGCT-------AG---TG-GC-------T--TG-GC---AC------------------------------------TGCTTAGATGAACC-------------------------TCTAATGGCAGT-----------------CC--------A-TCC-CTT-CAA--------------------------CAGCTGCAGCCTATGCCATTGAA---GCCGTGA------AACCGGAACCGGAGGAGCCCAAGACGAACSizeHit CountTotal NormTotal
No Reads
droBia1
CAA---------------------------------------------------ACGCAGCTG--GCCACCG-AAGTGAACGGCGGCGGC-------------------------------------------------------------GGAGGAG--------------------GAGCGTCCACCACGGCGGAAGC---GGAGGAACCCAGTGCCGATCTGCGCAAGAAGTTCCAGTCGCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGTAGT-------------GCC---------CCCT---------------------------------------------------------CTCTAAAAGC------------GGTCTTTACC-----TTTC-G------------T-----T-------G-TCC-CCC--------------------------TAGCTGCGGCCTATGCCATTGAA---GCCGTTA------AATCGGAAGCGGAGGAGCTGAAGACGAACSizeHit CountTotal NormTotal
No Reads
droTak1
CAA---------------------------------------------------ACGCAGCTG--GCCACCG-AAGTG------------------------------------------------------------------------------------------------------GCGCTAATCACGGCGGAGGC---AGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCACGTGCCCTGCCACCACTACCAAAGAAGGGTAATTAGAAG-------------GTC---------CCTT-ATCCAA--GT---------------------------------------GAAGAGTC-------------------------TCTAA---------------------ATTTT--ATT---TTTG---TC-CCA--------------------------CAGCTGCAGCCTATGCCATTGAA---GCCGTTA------AATCGGAACCCGAGGAGCTGAAGGCGAACSizeHit CountTotal NormTotal
No Reads
droEug1
TAACC------AGCGCTCCGGGGGTAG---CAGG----------------ACAAACCCAGCTG--GCCACCG-AACTGAACGGTGTTGGC-------------------------------------------------------------GGAGGAG--------------------GGGCGTTAATCACGGCGGAAGC---GGACGAACCTAATGCCGATCTGCGCAAGAAGTTCCAGTCCCGTGCCCTGCCACCACTACCAAAGAAGGGTAAGTATT---------------GCC---------CCCTC-TA-AA-------------------------------------TCCGTAGGAGAGTC-------------------------ACTAAAGCCCGG----------------------CC---TTTTC-TAT-CAA--------------------------TAGCAGCAGCCTATGCCATTGAA---GCCATTA------AACCGGAACCAGAGGAGCTAAAGACGAACSizeHit CountTotal NormTotal
No Reads
dm3
CGGGT------------------GCAG---CGGG----------------GCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGGCTGAGGC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGGACG-------------CCTT-------G--CAG----AACTGCTGGTTGTGT----CTAT--AGTTGTCTA----------------------------------------------TA---------------------ATTGTCATAGC---TTTGC-CAT-TCA--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AGTCGGAACCGGAGGAGGTCAAGACGAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACTGC..........................................................................................................................................................................................................................25121.00210000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000020000001000001010000000000000000000000000000000000000000000000100000000000000000000010111100000000000000000000000000000000000000000000000000000000000002000000010000000302000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACTG...........................................................................................................................................................................................................................24112.00120000000000000000000000000000000000000000000100000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000100000000110001000000000000000000010
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACTGCTG........................................................................................................................................................................................................................2718.0080000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200002000000000000000000000000000000000000000000000000000000000000000000000001000000000000002000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACTGCT.........................................................................................................................................................................................................................2616.0060000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000101000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................CTT-------G--CAG----AACTGCTGGTTGTGT----CT...........................................................................................................................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TGCCGATCTGCGCAAGAAGTTCCAGTC..........................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAGAAGTTCCAGTCTCGTGCCCTGCC..............................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GTTGATAACGGCTGAGGC---.................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TGCTGGTTGTGT----CTAT--AGTT...................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTATGCCATTGAA---GCCGTCA------AG...........................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACTGCTGG.......................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCCGTCA------AGTCGGAACCGGA................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GG----------------GCAAACCCAGTTG--GCCAGCG-AACTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGGC..........................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGC---TTTGC-CAT-TCA--------------------------CAGT................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCCGTCA------AGTCGGAACCGGAGGA.............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCATTGAA---GCCGTCA------AGTCGGA......................2612.0020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGAGGC---GGACGAACCGAATGCCGA...............................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACT............................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................AAGAAGTTCCAGTCTCGTGCCCTGC...............................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AGTCGGAACCGGAGGAGGT..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----A...............................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GGCTGAGGC---GGACGAACCGAAT....................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA------AGTCGGAACCGGAGGAGGTCAAG......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AGTCGGAACCGGAGGAGGTC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TCCAGTCTCGTGCCCTGCCACC...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AGTCGGAACCGGAGGAG............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GATAACGGCTGAGGC---GGAC.............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--C......................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................G------------------------------------------------------------------------------------------------GGACGTTGATAACGGCTGAGGC---G................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................A---------------------ATTGTCATAGC---TTTGC-CAT-TCA--------------------------CAC.................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AAACCCAGTTG--GCCAGCG-AACTGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGG----------------GCAAACCCAGTTG--GCCAGCG-AAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................AACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GG........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GAGGC---GGACGAACCGAATGC..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TGAGGC---GGACGAACCGAATGCCGATC.............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................GAACG------------------------------------------------------------------------------------------------GGACGTTGATAACG............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAACCGGAGGAGGTCAAGACGAA.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TGCCGATCTGCGCAAGAAGT.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGGCT.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AG----AACTGCTGGTTGTGT----C............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTCAAGACGAAT1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------AGTCGGAACCGGAGGAGGTCAAGA.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCA------AGTCGGAACCGGAGG..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGG...........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GATCTGCGCAAGAAGTTCCAGTC..........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACTGCATC.......................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGAGTGGACG-------------CCTT-------G--CAG----AACTGCTGG.......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCATTGAA---GCCGTCA------AGTCGGA......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AACTGG..........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGC....................................................................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TT-------G--CAG----AACTGCTGGTTGTGT----.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................AGCG-AACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGGC..........................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCA------AGTCGGAACCGGAGG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AGTCGGAACCGGAGGAGGTCATC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGACGTTGG.................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------AGTCGGAACCGGAGGAGGT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................GAATGCCGATCTGCGCAAGAAGTTCCAG............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TCTGCGCAAGAAGTTCCAGTCTCGTGC....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCA------AGTCGGAACCGGAGGAG............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAA---GCCGTCA------AGTCGGAACCGG.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGGCT.........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCATAGC---TTTGC-CAT-TCA--------------------------CAC.................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTCA------AGTCGGAACCGGAGG..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGACGT....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCA------AGTCGGAACCGGAGGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CAAACCCAGTTG--GCCAGCG-AACTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GAAGTTCCAGTCTCGTGCCCTGCCA.............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA---GCCGTCA------AGTCGGAACCGG.................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCCGTCA------AGTCGGAACCGGAGG..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGGAACCGGAGGAGGTCAAG......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................AACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAAC.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................TGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACG............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................AACGGCTGAGGC---GGACGAACCGAAA....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GCCGATCTGCGCAAGAAGTTCCAGTC..........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----AA..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGACG.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................T----CTAT--AGTTGTCTA----------------------------------------------TA---------------------ATTGTCATAGC---...........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCGGAGGAGGTCAAG......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTCA------AGTCGGAACCGGAGGAGGTCA........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTGAGTGGACG-------------CCTT-------G--CAG----................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAAGAAGGGTGAGTGGACG-------------CC...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTATGCCATTGAA---GCCGTCA------AGTCGGA......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TGGTTGTGT----CTAT--AGTTGTCTA----------------------------------------------TA---------------------ATT......................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................CCGATCTGCGCAAGAAGT.................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAA---GCCGTCA------AGTCGGAACCGGA................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................G-AACTGAACG------------------------------------------------------------------------------------------------GGACGTTGATAACGGC..........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CCGAATGCCGATCTGCGCAAGAAGTT................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GTTCCAGTCTCGTGCCCTGCCACCA..........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGCCTATGCCATTGAA---GCCGTC....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TTGTGT----CTAT--AGTTGTCTA----------------------------------------------TA---------------------AT.......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CGGCTGAGGC---GGACGAACCGAA.....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGACGTT...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................AGGC---GGACGAACCGAATGCC.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TAACC------AGCGCTCCGGGGTCAG---CGGG----------------CCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGCGTTGATTACGGCTGAGTC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGGACG-------------CCT--------G--CAG----AGCTGGCGGTCGTGTAAGTCT--A--------------------------------------------------------TA---------------------ATTGTCATACC---TTTGC-CATCCCA--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AGTCGGAACCGGAGGAG------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................TTCCAGTCTCGTGCCCTGCCACCA..........................................................................................................................................................................................................................................................................................2411.00100000010000000000
........................................................................................................................................................................................TGATTACGGCTGAGTC---GGACGAACCGA......................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................................................................................................................................................................................TGCCGATCTGCGCAAGAAGTT................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...................................................................................................................................................................................................GAGTC---GGACGAACCGAATGC..................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........................................................GTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGCGTT...................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
droSec2
TAACC------AGCGCTCCGGGGTCAG---CGGG----------------CCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGCGTTGATTACGGCTGAGTC---GGACGAACCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTGGACG-------------CCT--------G--CAG----AACTGGCGGTCGTGTAAGTCT--A--------------------------------------------------------TA---------------------ATTGTCATACC---TTTGC-CATCCCG--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AGTCGGAACCGGAGGAG------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................GATTACGGCTGAGTC---GGACGAACCGA......................................................................................................................................................................................................................................................................................................................................2611.0010100
................................................................................................................................................................................................................................................TCTCGTGCCCTGCCACCACT........................................................................................................................................................................................................................................................................................2011.0011000
droYak3
CAA---------------------------------------------------ACCCAGCTG--GCCAGCG-AACTGAATG------------------------------------------------------------------------------------------------GGGCGTTAATTACGGCTGAGGC---AGACGAATCGAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTAGTCG-------------TCTCCGCGCCTC--CTG----AACTGGTCATCTTCCATGCTT--ATAAATGACTA----------------------------------------------TA---------------------A-----ATAAC---TTTAC-CAT-CCA--------------------------CAGCCGCAGCCTATGCCATAGAA---GCCGTCA------AACCGGAGCCGGAGGAGCTCAAGACGAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................GTTAATTACGGCTGAGGC---AGACG............................................................................................................................................................................................................................................................................................................................................2311.00100000010000
......................................................................................................................................................................................GTTAATTACGGCTGAGGC---AGACGA...........................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AACCGGAGCCGGAGGAGCTCA........2211.00100100000000
...........................................................................................................................................................................................................AGACGAATCGAATGCCGATC.............................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................................................................................................................................................................................GGCGTTAATTACGGCTGAGGC---A................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
......................................................................................................................................................................................GTTAATTACGGCTGAGGC---.................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.......................................................................................................................................................................................................C---AGACGAATCGAATGCCGATCTGCGC........................................................................................................................................................................................................................................................................................................................2611.00100100000000
droEre2
TAACC------AGCGCTCCGGGGGCAG---CGGG----------------CCAAACCCAGTTG--GCCAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGCGGTAATTACGGCTGAGGC---AGACGAACCAAATGCCGATCTGCGCAAGAAGTTCCAGTCTCGTGCCCTGCCACCACTACCAAAGAAGGGTGAGTAGTCG-------------GCT--------C--CCA----AACTGGTGATCTTGTATGCCT--A--------------------------------------------------------TA---------------------A-TGTCGTAAT---TTTCC-CAT-CCA--------------------------CAGCCGCAGCCTATGCCATTGAA---GCCGTCA------AACCGGAGCCGGAGGAGGTCAAGGCGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................AAAGAAGGGTGAGTAGTCA-------------.....................................................................................................................................................................................................................................................1911.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCCGGAGGAGGTCAAGGCGAAC2511.0011000000
........................................................................................................................................................................................................................GCCGATCTGCGCAAGAAGT.................................................................................................................................................................................................................................................................................................................1911.0010000100
...................................................................CAGCG-AACTGAACG------------------------------------------------------------------------------------------------GGGC......................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.......................................................................G-AACTGAACG------------------------------------------------------------------------------------------------GGGCGGTA..................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.........................................................................................................................................................................................................................................GTTCCAGTCTCGTGCCCTGC...............................................................................................................................................................................................................................................................................................2011.0010000100
..........................................................................................................................................................................................ATTACGGCTGAGGC---AGACGA...........................................................................................................................................................................................................................................................................................................................................2011.0010000100
......................................................................................................................................................................................GGTAATTACGGCTGAGGC---AGAC.............................................................................................................................................................................................................................................................................................................................................2211.0010000100

Generated: 05/16/2015 at 08:19 PM