dvi_13949

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CAGCAACAAACAACAAATGACAGCTTATAAATAATATAAGCAACAGCTTCTATTTTGCAAACGTTCGAATTATGCATGCGCATATAGAGGATGTATTTTTATGATATCAAGTATAACAATGTTGGCTAAAATATGCGCACCTACAGTATTTGTCTATATAACTCATTCGTGTTTATATTTTATGTAATGTTTTCCATGTAGCTAAAAGCCAACCGAATGTTATGGGAAAGTAAAGCAAAGCAAGTCCTGAT ************************************************..........((((((....(((((....)))))....)))))).......................(((((((..(((((((((.((((....(((((........)).))).....)))).)))))))))..)))))))..........************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	V116 male body	M061 embryo	SRR060659 Argentina_testes_total	SRR060667 160_females_carcasses_total	SRR060686 Argx9_0-2h_embryos_total	V053 head
....AACAAACAACAAATGACAGCTT.................................................................................................................................................................................................................................	22	0	1	2.00	2	1	1	0	0	0	0	0
........................................................................................................................................................................................................................ATGTTATGGGAAAGTAAAGC...............	20	0	1	1.00	1	0	0	0	1	0	0	0
.................................................................................................................................................................................................................CAACCGAATGTTATGGGAAAGTAAA.................	25	0	1	1.00	1	0	1	0	0	0	0	0
.............................................................CGTTCGAATTATGCATGCGCAT........................................................................................................................................................................	22	0	1	1.00	1	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................AGCAAAGCAAGTCCTGAT	18	0	1	1.00	1	0	0	0	0	0	1	0
..........................ATAAATAATATAAGCAACAG.............................................................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................TGTTATGGGAAAGTAAAGCAAA............	22	0	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................TGTTATGGGTAACTAAAGC...............	19	2	3	0.33	1	0	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droVir3	scaffold_12970:10951345-10951595 +	dvi_13949	CAG---------CAACAAACAACAA-ATG----------------------------ACAGC--------------------------------------------------TTATAAATA---------------------------------------------------------------------------------------ATATAAGCAACAGCTTCTATTTTGCAAACGTTCGAAT---------------------------------------------------------------------------------------------------------------------------TATGCA-----------------------------------------------------------------------------------------------------------TGCGCATATAGAGGATGTATTTTTATGATATC-----------------------------------AAGTATAACAATGTTGGCTAAAATATGCGCACCTACAGT----------------------------------------------------------------------------------------------------------------ATTTGTCTA----------------TATA------ACTCAT----TCGTGTTTA---------------------TATTTTA--------------------------------------TGTAATGTTTTCCATGTAGCTAAAAGCCAACCGAATGTTATGGGAAAGTAAAGC----------------------------------------------------------------AAAGCAAGTCCTGAT--------------
droMoj3	scaffold_6473:10399190-10399523 -		CAA---------CAGCAGCAGCAGCAGCA----------------------------ACAAC---AA--------------------------------------------T-------------------------------------------------------------------------GCATAAATAACAGACTATAAATAATCCGAGCAGC--------------------------------------------------------------------------------------------------------------TG--------------------------------------------------C-----------------------------------------------------------------AGCTCGCTCGACATTCATAT-------------------------------------------------------------------------------------------------------------GAAGCTG-AAATGATGTTTAAATAAAAATATGCACATTTCCGTATATATTTGCATATGTGTGCATATGTGTGCATGGGTGTCTAGTAGCATATATGTATGTAAGTGTGTGGAGGGGGGACTGTGTGTGTCTA----------------TAAA------TCGTAT----TCATATTCA---------------------TGTTTAATCTCATATGTCTCATGTTCTTCGTCTTATTCTTTTGC---------------TGTAGCTAAAAGCCAATCGAATGCTCTGGGAAAGTAAAGC----------------------------------------------------------------GAAACAAGTGCTGCA--------------
droGri2	scaffold_15203:2944290-2944591 +		CAA---------CAATCAGAATAACAAGA----------------------------ACGAT---AA--------------------------------------------TGGAAACAACAA-----------ATATTGCAAGT--------------------------------------------------------------------------------------------GCTCGAATTATGCTTGCATGTGCAGGATACTCATACGTATACGTATACGTGTGTGTAT----------------------------------------------------------------------------------------GT----------ATATG-----------------------------------TGTATGTATGTAGGT---------ATT--------TGTATGGTATATG-GTATAT-----------------GATATC-----------------------------------GAGTACCGTCATGTCGGCTAAAATATG-----------------------------------------------------------------------------------------------------------------------ACTATATGCATATATATATGCTAATATTGTAACATAACTGATTCAT----TCCTGTTTA---------------------T----------------------------------------------------TTTGTATATAGCTAAAAGCCAACCGCATTCTGTGGGAAAGTAAAGC----------------------------------------------------------------GAAGCAAGTGCTGCA--------------
droWil2	scf2_1100000004511:6249809-6249983 +		CAG---------GCGCAGCAACAACAATT----------------------------GCAAT---TG-G----------GA----------CAA--TTCCAACAGCAA---CAGCCTCAAC----------------------------------------------------------------A-----------------------GGTAAGCA----------------------------------------AGCATCATTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCTGTTCTCAATTACAATTCA-------------------------------------------------------------------------------------------------------------------------------------------AT------------------------------TTAATTGAAT--TTCATTTTTG----------------------------------------------------------------T---------------TCCAGCAGACAATTCCCCAGCAGATACAACAACAACAAAC----------------------------------------------------------------ACAACAAGTTTTG-G--------------
dp5	XL_group1e:3501347-3501569 -		CAG---------CAACAGCTGCTTAAATG------------GATCCAATAATCCACAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT------------------------------TATGCTCAATCCTCATATGTGTGCCTGCGGATGTTCATTTAAAATATTTAAAGGAT--------C------------------------------------------------------------TACAAT-TAAGACATA---------CATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAATATAGT----------------------------------------------------------------------------------------------------------------ATTTGTATT----------------TATGCAGTCGATTAAT----TTGTTTGTACATTT---------------------------------------------------------------------------TTCAGGTGAAGGCAAATCGAAGACTGTGGGAAAATAAGGC----------------------------------------------------------------CAAGCAAGTGCTCCA--------------
droPer2	scaffold_17:438205-438418 -		ATG---------GAGGATATAA-----------------------------TCCACAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT------------------------------TATGCTCAATCCTCATATGTGTGCCTGCGGATGTTCATTTAAAATATTTAAAGGATAGTTGCATC------------------------------------------------------------TACAAT-TAAGACATA---------CATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTACATATAGT----------------------------------------------------------------------------------------------------------------ATTTGTATT----------------TATGCAGTCGATTAAT----TTGTTTGTACATTT---------------------------------------------------------------------------TTCAGGTGAAGGCAAATCGAAGACTGTGGGAAAATAAGGC----------------------------------------------------------------CAAGCAAGTGCTCCA--------------
droAna3	scaffold_13334:775790-775951 +		CCA--A------CAAAAACAAGAAGAAAA------------AAA-------------ACAGC---AAGGAAGCAG------------------------------------CGT---------ATTTGGCGAAA----------------------------------------------------ATCTTG--------------------------------------------------------------------------------CAT-------------------T----------------------------------------------------------------------------------------------------------------------------GATGGT--AATGCATGCTAGAAAACCGCAGCGTATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGATGGGTATGGATATT---------------------TGT--------------------------------------TGTAAAACAATCAAA-------------------------------------------------------------AACAACAA---------------TTAAAAGT--------------------------TGTTAAC--TAAA----A
droBip1	scf7180000396575:437408-437627 -		GCCAACAACCATCAGCAACAGCTG---------------------------------------------------------------------------------------CTGAATCAAC---------------------AAT----------------------------------------GGTCATA--------------------------------------------------------------------------------CAT-------------------TAAAATA-------------------------------------------------------------------------------TACAATTTAAGAGATA---------CACATAAATGCAAA-----------ACATGCCAG--------------------------------------------------------------------------ATTTTCAGATTTATATAAAAGATTTTTCAGTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------GTTTCAGTAT------------------------------CTTATAGATTTTTGTGGTTTTT---------------------CAT--------------------------------------T-----------------TCCAGGTAAAGGCCAATCGAATGCTGTGGGAAAATAAGGC----------------------------------------------------------------CAAACAAGTGCTGCA--------------
droKik1	scf7180000302344:1521841-1521916 -		TTT---------AAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAAATT---T----------TT----------------------------------------------------------T-----------------TTCAGCTAAAGGCCAATCGCATGTTGTGGGAGAGTAAGGC----------------------------------------------------------------CAAGCAGGTGCTGCA--------------
droFic1	scf7180000454106:2588816-2589019 +		CAG---------CAACAATAAAAACAACA----------------------------ACAGC---CAGC----------AATAAACAATAACAG---AGTTACAG------CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGAACAACAACAACCGCTGCTAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGA------TTATAA----ACAAAAACA---------------------TAACAAACCGTACAACATTTATGTAATATTTACAATATTTTTGT---------------CG--------------------------AGGCACCAAAGCAAAGTAACATTTTGCAACGTAGACTC---------------TT--------------------------AGGCGTCGCACACA-AAAA----T
droEle1	scf7180000490971:4386-4503 +		CAG---------CAACAAGAGCAGTG-------------------------------------------------------------------------CAGTAACAA---CAAGAACAAA----------------------------------------------------------------A-----------------------AATAAACGTGAAAAGATATTCTTCAAAAAATAACAA---------------------------------------------------------------------------------------------------------------------------CACACA-----------------------------------------------------------------------------------------------------------GTCAAATATAAAGGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCACATC------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC---GAATATA--------------
droRho1	scf7180000778255:11016-11204 +		CAG--C------AGCCAACAATCAAAATC------------ACA-------------GCAACAATAG--TAGCAATAAATT----------TTGTTATCCTACGGCGG---CGGCCATGG-----------------------------------------------------------------------A--------------------------------------------------------------------------------------------GAATATGTTCCAGAACAATCAGATGGC------------------GG--------------------------------------------------CCGCC-GCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGC----------------------------------------------------------------------------------------------------------------ACGTGAATC----------------GCT----------GCTGAATTCTTATCTG---------------------TATCAGA--------------------------------------AAGAAGGCGAT-------------------------------------------------------------CCCGGCAG---------------CTATATGT--------------CGGAGC----A----------GAGC----T
droBia1	scf7180000302428:391432-391672 -		TAA---------AAGCAAACAAAGTTACA----------------------------AA-------------------------------------------------------------------------------------ACGCCGCAATTGAAAGCTTCCATTTTAAAACAGAGAAATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAATGCAACACAAGT--AATAAATATTTAAATATATGAATTTATGCAAAATATATAT-------------------------------------------------------------------------------------------------------------GAACCTATAAAAAATATATAAATAAAAA---------------------------------------------------------------------------------------GTTACTATTT------------------------------TCTATAAATATA---------------TATAAAGCATATATTATGT--------------------------------------G-T---------------ACGCGTTGAAGACAAAAACAATATT-TTAAATAATAAATC----------------------------------------------------------------AAATCAATT--------------------
droTak1	scf7180000415812:38771-38822 -		AGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGCCAATCGAATGCTGTGGGAGAGTAAGGC----------------------------------------------------------------GAAGGAAGTGCTGCA--------------
droEug1	scf7180000409466:1487265-1487524 -		CAG---------CAACACTATACAA-ATT------------AAAGCA-------------AA-------------------------------------------------------CA---------------AAGTTACAAATCGCCGCAATTGAAAGCTTCCATTTTGAAACAGAGAAATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------GCAGAATAAATATTTAACTATATGAATTTATGCAAC--ATATAT-------------------------------------------------------------------------------------------------------------GAACCTATAAAATATATATATAT--------------------------------------------------------------------------------ATATATAAAGAAGTTACTATTT------------------------------TCTATAAAT----TTAAT-ATTCAATATACAAA----------------------------------------------------GT---------------TGAAGACAAAA-----ACCAAAATCAAATCAAACTTTGCC----------------------------------------------------------------CAGTCGAGTACTGCAAATACGAAC----T
dm3	chrUextra:17248539-17248783 +		TAA---------TAACAATAAACATAATA----------------------------ATAAT---AA-T----------AA------------------------------TAATATTAGT---------------------AATAATCATAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAGAATTTCGCCAATCCATAATAATATAATATTATATATAATA---------TAATTATATAAT------------------------------------ATAAAT---------ATATATATAAA-------------------------------------------TCCGTAAAAATAATATAAAAAAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------ATAGTTAAAATATTGTTTTATTGAT--------------------------------CGCGACTGTGTGTCATGTGCTTTCTTGTCGTTGTTAAAAAGTTAACAAAGC-AATAATAAT--------------
droSim2	2l:12008774-12008876 +		CAA---------TAACAATTT---AAATA------------CAGGCAACA-------ATAGC---CAGC----------AA------------------------CAGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCGCAGATACTGC----------------------------------------------------------------CGGTCAAGTACGAGTATTTAGAGAATCTA
droSec2	scaffold_20:116200-116251 +		AGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGCCAATCGAATGCTGTGGGAGAGTAAGGC----------------------------------------------------------------GAAGCAAGTGCTGCA--------------
droYak3	X:3014909-3014999 +		CAA---------CTGCGACGACAAAACTCCTGGTGCACATTAA--------------------------------------------------------------------CGCAGGCAAC----------------------------------------------------------------A-----------------------GTTTAACG---------------------TGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATT----------------ATT----------GCGAATTTGT--------------------------------------------------------------------TG-----------------------------------------------------------------------------------------TGTGTTTTTC-----------------------------------------TGCG----A
droEre2	scaffold_4803:1520-1646 +		ATA--A------TAATAATATATAAT----------------ATATAATA----------AT--------------------------------------------------ATATAATAT--ATTTTATATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT---------TATATATATTTT------------------------------------ATATAT---------ATT--------TATATAATATATAAATATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATATAATAATAATAA-----------------------T----------------------------------------AATAATAATAATAAT--------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

CAG---------CAACAAACAACAA-ATG----------------------------ACAGC--------------------------------------------------TTATAAATA---------------------------------------------------------------------------------------ATATAAGCAACAGCTTCTATTTTGCAAACGTTCGAAT---------------------------------------------------------------------------------------------------------------------------TATGCA-----------------------------------------------------------------------------------------------------------TGCGCATATAGAGGATGTATTTTTATGATATC-----------------------------------AAGTATAACAATGTTGGCTAAAATATGCGCACCTACAGT----------------------------------------------------------------------------------------------------------------ATTTGTCTA----------------TATA------ACTCAT----TCGTGTTTA---------------------TATTTTA--------------------------------------TGTAATGTTTTCCATGTAGCTAAAAGCCAACCGAATGTTATGGGAAAGTAAAGC----------------------------------------------------------------AAAGCAAGTCCTGAT--------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.............AACAAACAACAA-ATG----------------------------ACAGC--------------------------------------------------TT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTATGGGAAAGTAAAGC----------------------------------------------------------------.............................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGAATGTTATGGGAAAGTAAA...............................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................CGTTCGAAT---------------------------------------------------------------------------------------------------------------------------TATGCA-----------------------------------------------------------------------------------------------------------TGCGCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC----------------------------------------------------------------AAAGCAAGTCCTGAT--------------	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................ATAAATA---------------------------------------------------------------------------------------ATATAAGCAACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTATGGGAAAGTAAAGC----------------------------------------------------------------AAA..........................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CAA---------CAGCAGCAGCAGCAGCA----------------------------ACAAC---AA--------------------------------------------T-------------------------------------------------------------------------GCATAAATAACAGACTATAAATAATCCGAGCAGC--------------------------------------------------------------------------------------------------------------TG--------------------------------------------------C-----------------------------------------------------------------AGCTCGCTCGACATTCATAT-------------------------------------------------------------------------------------------------------------GAAGCTG-AAATGATGTTTAAATAAAAATATGCACATTTCCGTATATATTTGCATATGTGTGCATATGTGTGCATGGGTGTCTAGTAGCATATATGTATGTAAGTGTGTGGAGGGGGGACTGTGTGTGTCTA----------------TAAA------TCGTAT----TCATATTCA---------------------TGTTTAATCTCATATGTCTCATGTTCTTCGTCTTATTCTTTTGC---------------TGTAGCTAAAAGCCAATCGAATGCTCTGGGAAAGTAAAGC----------------------------------------------------------------GAAACAAGTGCTGCA--------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
......................................................................................................................................................................................................ACTATAAATAATCCGAGCAGC--------------------------------------------------------------------------------------------------------------TG--------------------------------------------------C-----------------------------------------------------------------AGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	1	0

droGri2

CAA---------CAATCAGAATAACAAGA----------------------------ACGAT---AA--------------------------------------------TGGAAACAACAA-----------ATATTGCAAGT--------------------------------------------------------------------------------------------GCTCGAATTATGCTTGCATGTGCAGGATACTCATACGTATACGTATACGTGTGTGTAT----------------------------------------------------------------------------------------GT----------ATATG-----------------------------------TGTATGTATGTAGGT---------ATT--------TGTATGGTATATG-GTATAT-----------------GATATC-----------------------------------GAGTACCGTCATGTCGGCTAAAATATG-----------------------------------------------------------------------------------------------------------------------ACTATATGCATATATATATGCTAATATTGTAACATAACTGATTCAT----TCCTGTTTA---------------------T----------------------------------------------------TTTGTATATAGCTAAAAGCCAACCGCATTCTGTGGGAAAGTAAAGC----------------------------------------------------------------GAAGCAAGTGCTGCA--------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAACCGCATTCTGTGGGAAAG...................................................................................................	23	1	1.00	1	0	1

droWil2

CAG---------GCGCAGCAACAACAATT----------------------------GCAAT---TG-G----------GA----------CAA--TTCCAACAGCAA---CAGCCTCAAC----------------------------------------------------------------A-----------------------GGTAAGCA----------------------------------------AGCATCATTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCTGTTCTCAATTACAATTCA-------------------------------------------------------------------------------------------------------------------------------------------AT------------------------------TTAATTGAAT--TTCATTTTTG----------------------------------------------------------------T---------------TCCAGCAGACAATTCCCCAGCAGATACAACAACAACAAAC----------------------------------------------------------------ACAACAAGTTTTG-G--------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
No Reads

dp5

CAG---------CAACAGCTGCTTAAATG------------GATCCAATAATCCACAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT------------------------------TATGCTCAATCCTCATATGTGTGCCTGCGGATGTTCATTTAAAATATTTAAAGGAT--------C------------------------------------------------------------TACAAT-TAAGACATA---------CATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAATATAGT----------------------------------------------------------------------------------------------------------------ATTTGTATT----------------TATGCAGTCGATTAAT----TTGTTTGTACATTT---------------------------------------------------------------------------TTCAGGTGAAGGCAAATCGAAGACTGTGGGAAAATAAGGC----------------------------------------------------------------CAAGCAAGTGCTCCA--------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCAAATCGAAGACTGTGG........................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	3
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGGCAAATCGAAGACTGTGG........................................................................................................	24	1	2.00	2	0	1	0	0	0	0	0	0	0	1
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGGCAAATCGAAGACTGTGGGA......................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	2
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAAGGCAAATCGAAGACTGTGGGA......................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	2
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGGCAAATCGAAGACTGTGGG.......................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	2
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAAGGCAAATCGAAGACTGTGG........................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGGC----------------------------------------------------------------CAAGCAAGTGC..................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAATCGAAGACTGTGGG.......................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATAAGGC----------------------------------------------------------------CAAGCAAGTGCT.................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAATCGAAGACTGTGGGAAAAT..................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1

droPer2

ATG---------GAGGATATAA-----------------------------TCCACAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT------------------------------TATGCTCAATCCTCATATGTGTGCCTGCGGATGTTCATTTAAAATATTTAAAGGATAGTTGCATC------------------------------------------------------------TACAAT-TAAGACATA---------CATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTACATATAGT----------------------------------------------------------------------------------------------------------------ATTTGTATT----------------TATGCAGTCGATTAAT----TTGTTTGTACATTT---------------------------------------------------------------------------TTCAGGTGAAGGCAAATCGAAGACTGTGGGAAAATAAGGC----------------------------------------------------------------CAAGCAAGTGCTCCA--------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droAna3

CCA--A------CAAAAACAAGAAGAAAA------------AAA-------------ACAGC---AAGGAAGCAG------------------------------------CGT---------ATTTGGCGAAA----------------------------------------------------ATCTTG--------------------------------------------------------------------------------CAT-------------------T----------------------------------------------------------------------------------------------------------------------------GATGGT--AATGCATGCTAGAAAACCGCAGCGTATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGATGGGTATGGATATT---------------------TGT--------------------------------------TGTAAAACAATCAAA-------------------------------------------------------------AACAACAA---------------TTAAAAGT--------------------------TGTTAAC--TAAA----A	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..........................................AA-------------ACAGC---AAGGAAGCAG------------------------------------CGT---------ATTTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0
.............AAAAACAAGAAGAAAA------------AAA-------------AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.........................................................................AG------------------------------------CGT---------ATTTGGCGAAA----------------------------------------------------ATCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
............................................................GC---AAGGAAGCAG------------------------------------CGT---------ATTTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------GATGGT--AATGCATGCTAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
...............AAACAAGAAGAAAA------------AAA-------------ACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
..............AAAACAAGAAGAAAA------------AAA-------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0

droBip1

GCCAACAACCATCAGCAACAGCTG---------------------------------------------------------------------------------------CTGAATCAAC---------------------AAT----------------------------------------GGTCATA--------------------------------------------------------------------------------CAT-------------------TAAAATA-------------------------------------------------------------------------------TACAATTTAAGAGATA---------CACATAAATGCAAA-----------ACATGCCAG--------------------------------------------------------------------------ATTTTCAGATTTATATAAAAGATTTTTCAGTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------GTTTCAGTAT------------------------------CTTATAGATTTTTGTGGTTTTT---------------------CAT--------------------------------------T-----------------TCCAGGTAAAGGCCAATCGAATGCTGTGGGAAAATAAGGC----------------------------------------------------------------CAAACAAGTGCTGCA--------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTT---------AAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAAATT---T----------TT----------------------------------------------------------T-----------------TTCAGCTAAAGGCCAATCGCATGTTGTGGGAGAGTAAGGC----------------------------------------------------------------CAAGCAGGTGCTGCA--------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CAG---------CAACAATAAAAACAACA----------------------------ACAGC---CAGC----------AATAAACAATAACAG---AGTTACAG------CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGAACAACAACAACCGCTGCTAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGA------TTATAA----ACAAAAACA---------------------TAACAAACCGTACAACATTTATGTAATATTTACAATATTTTTGT---------------CG--------------------------AGGCACCAAAGCAAAGTAACATTTTGCAACGTAGACTC---------------TT--------------------------AGGCGTCGCACACA-AAAA----T	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CAG---------CAACAAGAGCAGTG-------------------------------------------------------------------------CAGTAACAA---CAAGAACAAA----------------------------------------------------------------A-----------------------AATAAACGTGAAAAGATATTCTTCAAAAAATAACAA---------------------------------------------------------------------------------------------------------------------------CACACA-----------------------------------------------------------------------------------------------------------GTCAAATATAAAGGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCACATC------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC---GAATATA--------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAG--C------AGCCAACAATCAAAATC------------ACA-------------GCAACAATAG--TAGCAATAAATT----------TTGTTATCCTACGGCGG---CGGCCATGG-----------------------------------------------------------------------A--------------------------------------------------------------------------------------------GAATATGTTCCAGAACAATCAGATGGC------------------GG--------------------------------------------------CCGCC-GCCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGC----------------------------------------------------------------------------------------------------------------ACGTGAATC----------------GCT----------GCTGAATTCTTATCTG---------------------TATCAGA--------------------------------------AAGAAGGCGAT-------------------------------------------------------------CCCGGCAG---------------CTATATGT--------------CGGAGC----A----------GAGC----T	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TAA---------AAGCAAACAAAGTTACA----------------------------AA-------------------------------------------------------------------------------------ACGCCGCAATTGAAAGCTTCCATTTTAAAACAGAGAAATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAATGCAACACAAGT--AATAAATATTTAAATATATGAATTTATGCAAAATATATAT-------------------------------------------------------------------------------------------------------------GAACCTATAAAAAATATATAAATAAAAA---------------------------------------------------------------------------------------GTTACTATTT------------------------------TCTATAAATATA---------------TATAAAGCATATATTATGT--------------------------------------G-T---------------ACGCGTTGAAGACAAAAACAATATT-TTAAATAATAAATC----------------------------------------------------------------AAATCAATT--------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGCCAATCGAATGCTGTGGGAGAGTAAGGC----------------------------------------------------------------GAAGGAAGTGCTGCA--------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CAG---------CAACACTATACAA-ATT------------AAAGCA-------------AA-------------------------------------------------------CA---------------AAGTTACAAATCGCCGCAATTGAAAGCTTCCATTTTGAAACAGAGAAATATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------------------------------------------------GCAGAATAAATATTTAACTATATGAATTTATGCAAC--ATATAT-------------------------------------------------------------------------------------------------------------GAACCTATAAAATATATATATAT--------------------------------------------------------------------------------ATATATAAAGAAGTTACTATTT------------------------------TCTATAAAT----TTAAT-ATTCAATATACAAA----------------------------------------------------GT---------------TGAAGACAAAA-----ACCAAAATCAAATCAAACTTTGCC----------------------------------------------------------------CAGTCGAGTACTGCAAATACGAAC----T	Size	Hit Count	Total Norm	Total
No Reads

dm3

TAA---------TAACAATAAACATAATA----------------------------ATAAT---AA-T----------AA------------------------------TAATATTAGT---------------------AATAATCATAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAGAATTTCGCCAATCCATAATAATATAATATTATATATAATA---------TAATTATATAAT------------------------------------ATAAAT---------ATATATATAAA-------------------------------------------TCCGTAAAAATAATATAAAAAAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------ATAGTTAAAATATTGTTTTATTGAT--------------------------------CGCGACTGTGTGTCATGTGCTTTCTTGTCGTTGTTAAAAAGTTAACAAAGC-AATAATAAT--------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAT--------------------------------CGCGACTGTGTGTCATGTGC.......................................................	25	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAGAATTTCGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0
................................................................................................................................................TAATCATAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAGAATTTCGCCAATCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGAT--------------------------------CGCGACTGTGTGTCATG..........................................................	25	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................TAATCATAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAGAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTTATTGAT--------------------------------CGCGACTGTGTG...............................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGCTTTCTTGTCGTTGTTAAAAA...................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................TAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAGAATTTCGCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATATTGTTTTATTGAT--------------------------------CGCGACTG...................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTTTCTTGTCGTTGTTAAAAAGT.................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTCATGTGCTTTCTTGTCGT............................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................T---------------------AATAATCATAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAGGAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATATTGTTTTATTGAT--------------------------------CGCG.......................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATATTGTTTTATTGAT--------------------------------CGCGACT....................................................................	25	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATAAAAAAGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------AA..................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

CAA---------TAACAATTT---AAATA------------CAGGCAACA-------ATAGC---CAGC----------AA------------------------CAGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCCGCAGATACTGC----------------------------------------------------------------CGGTCAAGTACGAGTATTTAGAGAATCTA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.........................................................................................................CAGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C............................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................................................................AA------------------------CAGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
....................................................................C----------AA------------------------CAGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAGCAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA...........................................................................................................	16	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

AGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGCCAATCGAATGCTGTGGGAGAGTAAGGC----------------------------------------------------------------GAAGCAAGTGCTGCA--------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGCCAATCGAATGCTGTGGG.......................................................................................................	22	1	1.00	1	0	0	1	0

droYak3

CAA---------CTGCGACGACAAAACTCCTGGTGCACATTAA--------------------------------------------------------------------CGCAGGCAAC----------------------------------------------------------------A-----------------------GTTTAACG---------------------TGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATT----------------ATT----------GCGAATTTGT--------------------------------------------------------------------TG-----------------------------------------------------------------------------------------TGTGTTTTTC-----------------------------------------TGCG----A

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

ATA--A------TAATAATATATAAT----------------ATATAATA----------AT--------------------------------------------------ATATAATAT--ATTTTATATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTT---------TATATATATTTT------------------------------------ATATAT---------ATT--------TATATAATATATAAATATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATATAATAATAATAA-----------------------T----------------------------------------AATAATAATAATAAT--------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dvi_13949

scaffold_12970:10951395-10951545 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-22.4	-22.3	-22.3