ID:

dvi_13757

 Coordinate:

scaffold_12970:9340810-9340960 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.1 -14.0 -13.7 -13.6

Flybase annnotation

CDS [Dvir\GJ19445-cds]; exon [dvir_GLEANR_4341:2]; intron [Dvir\GJ19445-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTAATAATGTTCTTGTTAATTTTACGTATATATTTAATTCGGTGATAAGTGCGATGCCAGCGCGATAAATAATTATGCGTATTTTTGGCAATAAGAGTTGTTCGTATTGGCCTCGCACTTATTCACAACATTTACATGCACACCCACACATAAACACATTCATAACAAAAACAACAACCACAACAACAAACTATTGATTAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCGCAGCAACAACAACA
**********************************************************.................((.((.(((((((((.((((.(((((..(((...((...))...)))..))))).))))..)))..........................))))))..))...)).********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060677
Argx9_ovaries_total
 M028
head
 SRR060654
160x9_ovaries_total
 SRR060679
140x9_testes_total
 V053
head
 M061
embryo
 SRR060682
9x140_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
.............................ATATTTAATTCGGTGATAAGTG........................................................................................................................................................................................................ 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..........................................................AGCGCGATAAATAATTATG.............................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TGATTAGCAAACAATTCAACA.................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................................TACAGCAACTGGCTGCGCAGCAA........ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................TAATTATGCGTATTTTTGGCAATAAGAG.......................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................ATTTTTGGCAATAAGAGTTGT...................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................ACACATTCATAACAAAAACAACAACCAC...................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CAAAAACAACAACCACAACAA................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAAAACAACAACCACAACAACTA.............................................................. 23 1 13 0.08 1 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................CAACAGACTATTGATGAACA................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 1
......................................................................................GGCAAAAACAGTCGTTCGT.................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

AATTATTACAAGAACAATTAAAATGCATATATAAATTAAGCCACTATTCACGCTACGGTCGCGCTATTTATTAATACGCATAAAAACCGTTATTCTCAACAAGCATAACCGGAGCGTGAATAAGTGTTGTAAATGTACGTGTGGGTGTGTATTTGTGTAAGTATTGTTTTTGTTGTTGGTGTTGTTGTTTGATAACTAATCGTTTGTTAAGTTGTGATAGTCGTCGTTGACCGACGCGTCGTTGTTGTTGT
**********************************************************************.................((.((.(((((((((.((((.(((((..(((...((...))...)))..))))).))))..)))..........................))))))..))...)).********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060672
9x160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
.................................................................................................................................................................................................................AATTGTCATAGTCGTCTTTGA..................... 21 3 4 0.25 1 1 0
.............................................................................................................................................................................................................GTAAAGTTGTTATAGTCGTTGT........................ 22 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:9340760-9341010 + dvi_13757 TTAATAATGTTC-----TTGTTAATTTTA---CG--------------------TATATATTTAATTCGGTGATAAGTGCGATGCCAGCG--CGA---------TAAA-----------------------------------------------------T-----------AATTA---------------------TGCG--TATTT--T------------------------TGGCAATAAGAG-----------TTGT----------TCGTATTGGCCTCGCACTTATT--------------------------CA-------------------CA------------ACAT-TTACATGCACA--CCCA-----------CACATAAA------------CACAT----TC----------------------------------------------------ATAACA---AAAACAACA---------------ACCACAACAACAAACTATTGATTAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------
droMoj3 scaffold_6308:1392701-1392973 - TTTATAATGTTT-----TTGTT------T---AT--------------------ATCT-----AATTGGGTGATAAGTGCGACGCC-GACATTGTTGTT-G------------------------ACTTT--------CCCTT------------TGTTCAT-----------G-----------------TTT-----GATG--T--------------------TTAATTTATTTTGGCAACAATTG-----------GTGT------------GTTTTGGCCTCGTACTTATTG---------------AAACAC---------CCGCAC----------CT------------ACAC-CTACATTTACA--CCCA-----------CACCTAAA------------CACAT----TC----------------------------------------------------ATAACC--AAAACCAACA---------------ACCACAACAACAAACTATTGATTAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------
droGri2 scaffold_15203:2044679-2044984 - TGAA---TGTTA-ATATTTGTTTATATTTGTAAG--------------------TTTG-----CAATTGATTGCGTGTGCGACGCCAGCG--CGATAG---------------------------------------------------------------------------A-TTT---------------------TGCG--T--------------------------------TGCAACTATCGGTAGTTT------------------TCGTATTGGCCTCGCAGTTG---------CACTTACTT----TTG---CACATCCACAT-----------------------------CCACACACACA--TGCACACATATA---CACAT------------------------ACGCACATTCATTTCACACCCCCACATATAAAAAAGAGACACACACACCTATTCATAACA------ACAACA---------------ACCACAACAACAAACTATTGATTAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------
droWil2 scf2_1100000004540:2527379-2527620 - CTA----TAT-----------TTTAGATA---ACTTTAAGCACACTTAATACAGGACA-----AAC-----------------TCC-------------------------------------------------------------------------GGCACTTTTA---------------------GTGAAAACGGATAAT--GGATTTCA------------------------------ATTG-TTGCGCATGGGTACGGCCA---CAAC-GACGGG--------------------------------------------------------------------------------------TCCG--CCCA-----------CTGTTACACAGACCATAACAC----AGAC------C-------------------------------------A---------ATAGCA---ACAACA------------------ACAACAA----------------------------------------------TAGTAATACAAC--AACCACATCAAATCATCCCA-CAAC-CACAC---------------------AGATACGTCTAC-----A---AACTGTG---CCGGCTGCA---GCTGTA-------
dp5 XR_group8:2357322-2357485 + AAT----CAT-----------TTTAATTA---TTTTTGACTTCAATTTGT----------------------------T----------------------------------------------------------------------TGTGTTTCCTCTTTCTTCTT---------------------CTTTATCCACGCATA--CGCTTTGAAT------------------------------CA-C-------------------------------------------------------TA-----------------------------------------------------G-------------------------GCG------AA------------AATAC----CA----------------------------------------------------ACAACA---ATAACAACA---------------TCCAAAACAA------------------------CAACAACAACAACAGTAAC---------------------------------------------------------------------------------------AAGACCAACA-CAACAACA---ACAACA-------
droPer2 scaffold_24:698240-698406 - AAT----CAT-----------TTTAATTA---TTTTTGACTTCAATTTGT----------------------------T----------------------------------------------------------------------TGTGTTTCCTCTTTCTTCTT---------------------CTTTATCCACGCATA--CGCTTTGAAT------------------------------CA-C-------------------------------------------------------TA-----------------------------------------------------G-------------------------GCG------AA------------AATAC----CA----------------------------------------------------ACAACA---ATAACAACA---------------TCCAAAACA-----------------------------------------------------------ACAACAACAACAA-------------------------------------------------CAACAGTAACAAGACCAACA-CAACAACA---ACAACA-------
droAna3 scaffold_13117:2320031-2320170 - GTAATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAC--------------------------------------------------------------------------------------------------------------------------------------------------------CACTAGTAACAACAATACAAGCAATAGCAATAGCAACAGCAACAACAGCG---------------AGAACAACAACATGCTACTCTTTCACCAA--------CATTACCATCAGCAA------------------------------------------------------------------------------------CAGCAAGACCAA---CAGCAACT---ACAACGCCTGGGA
droBip1 scf7180000396434:363160-363402 - TTAATCTCGTTT-----TTATTAAGTTAC---T-----------------------AT-ATCTTTTTGGATAATTCGTTTGAGGTTATAA-----------------ACAAAAAAGTACATCTCTAACTT--------CCGTG------------TGGGAAT-----------G-----------------------------------------------------------------------TGTG-TTGTGCCTTGCCAC-----------------------TAAGCCG---------ATTTAGTTGAGAATTTCGCCA-------------------CA------------ACAA-GAACACACACA--CACACACACACA---CACAT------------------------ACAGAGA----------------------------------------------------------------GACATTGGGAACAACAACTAGAACATGTTTCGAGAGCCTGACACACATACCAACACACTCAG---------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302696:1072261-1072363 + TTG----CAC-----------GCGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------CATAT------------------------AA----------------------------------------------------------------TCAGAA---------------ATATTACCAACAAACTATTGATCAGCAAACCATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---GCAACA-------
droFic1 scf7180000453851:86089-86312 - TTA----AAT-----------AAGCAATG---AGTTT--------------------------GTCT-----CCCAACGAGACA----------------------AA-----------------------------------------------------A-----------AAAAATATATATGTATAA-AAAAAAGGAAAAAGGTTC--GGGGCGGTCGCACA-------------------A-----------TTGG-------C---ACTT-GAAAGGCATCAA-----------------------------------------------------------------------------------------------------GATAC-------------------------A----------------------------ATGGCAATA---------------ACTGCA---GCAGCA------------------ACATCAC----------------------------------------------CAGCAACACAGC--AGCGGCGGCAAACAAGCTAAACAAGTATTGC---------------------CGCTGTGCCGAG-----A---AGCAGCAG---CAGCAACAACAACAGC--------
droEle1 scf7180000491104:2396864-2397011 - GCCACAACCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT-------------------------------------------------------------------------TCGCAACA-----------------ACA------AG------------CACAC----CA----------------------------------------------------ACAACA---ACAACA------------------ACAACAACAACAGCCACCTCAATTGCTGCCCACACA---------------------------TC--AGT----------------------------TTGCACACTTGTCTTCCTTTGTGACACCAA--CAGCAGC---AGCGGCAGCAGCAGCAGCA---GCAGCG-------
droRho1 scf7180000776792:8608-8702 - CG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTACTAAT-GATA---------------------------------------------------------------ATAAACA-T---------------------------------------------------------------------------------------------------------------------------------------CACCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCTCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------
droBia1 scf7180000302126:770926-771110 - TTGCTAA-----------------TCTTA---AG--------------------GACC-----ATCTTAGTGGTTAGTGCGATGCCAGAC--CGG-----------AA-----------------------------------------------------C-----------G-----------------------------------------------------------------------CTTG-TAGCTTA-------AACACAAAC-CCCTACTGGCACCGCACTAATGATG----CACTAATAA----C--------------------------------------------------GAAACA-C---------------------------------------------------------------------------------------------------------------------------------------CATCAACACCCTATTGATCAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCTCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------
droTak1 scf7180000415289:295144-295331 + CCATCAATGCTCACTAATTGCTAATCTTA---AG--------------------GACC-----CATCTAGTGGTTAGTGCGATGCCAGAT-TCGAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-GACTGGCATCGCACTAATTGTG----CACTAATAA----T--------------------------------------------------TAAACA-C--------------------------------------------CA----------------------------------------------------TC-----------------------------------AACCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCTCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------
droEug1 scf7180000409466:4778870-4779096 + GTT----CAT-----------GTTCATCA---GGCTT--------------------------TTCTTTTTCATCAGCGCGGCGGCGAAAAGCGAGAAGCGAGCGTAA---------ACACTTT--GCTTTCATACGTCGCGACGTTCGTGTTGTTG----TGTTGTTT-------------------------------------------------------------------------------------------------------------------ATGGCAACAACTAC-ACGT---------------------------------------------------------------AGCAACACC--CA----CG------GCAGCAG------------CACAG-----C----------------------------------------------------ACAGCA---GAAGCAGCA---------------GCAGCAG-------------------------------------------------CAGCACAGCACAGCAGAAGCGGCAA-------------------------------------------------------C---AGCAGCAGCAGCAGCAACA---ACAGCA-------
dm3 chrX:16230174-16230379 + TTA------------------------------------------------------------------GTGGTTAGTGCGATGCCAGACATCGAGAGTCAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATGAACATC---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------
droSim2 x:15349725-15349953 + TTT----CGT-----------TAGTATTA---AG--------------------GACT-----ATCTTAGTGGTTAGTGCGATGCCAGACATCGGGAGTCAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATGAACACC---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------
droSec2 scaffold_17:57127-57355 + TTT----CGT-----------TAGTATTA---AG--------------------GACT-----ATCTTAGTGGTTAGTGCGATGCCAGACATCGGGAGTTAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATGAACACC---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------
droYak3 X:10361014-10361222 + TAT--------------------------------------------------------------CTTAGTGGTTAGTGCGATGCCAGACATCGAGAATCAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATAAACA-T---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------
droEre2 scaffold_4784:15912427-15912653 + TTCATAATGTTC----------------G---CCT-------------------------------------GTTAGTTCAATA---------------------------------------------------AATCAGGACATGTATGCGATTGGCCATGCTTGTTCTAGA-A----------------TTAACCAAACG--TGTTC--C-------------------------------------------------------------------TGGCCACGCAACCC---------CACCCCCTCAGACTGCCGCC-----CAAAACCACCCCCACGTACCGCCCCAGATACAA-G------AACA--AATG-----------CAAATTCAAACACAAACACAA----AGAC------A----------------------------------------------------------------------------------------------------------------GGCAGCAAAAGCAG------------------------------------------------------------------------------------------C---AGCAGCAGCAACAGCAACG---GCAACA-------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTAATAATGTTC-----TTGTTAATTTTA---CG--------------------TATATATTTAATTCGGTGATAAGTGCGATGCCAGCG--CGA---------TAAA-----------------------------------------------------T-----------AATTA---------------------TGCG--TATTT--T------------------------TGGCAATAAGAG-----------TTGT----------TCGTATTGGCCTCGCACTTATT--------------------------CA-------------------CA------------ACAT-TTACATGCACA--CCCA-----------CACATAAA------------CACAT----TC----------------------------------------------------ATAACA---AAAACAACA---------------ACCACAACAACAAACTATTGATTAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................ATATTTAATTCGGTGATAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000200000000000000000000000000000000000
......................................................................................AGCG--CGA---------TAAA-----------------------------------------------------T-----------AATTA---------------------TG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTAGCAAACAATTCAACA........................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................T-----------AATTA---------------------TGCG--TATTT--T------------------------TGGCAATAAGAG-----------.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATTT--T------------------------TGGCAATAAGAG-----------TTGT----------.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................A------------CACAT----TC----------------------------------------------------ATAACA---AAAACAACA---------------ACCAC..........................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---AAAACAACA---------------ACCACAACAA.....................................................................................................................................................................2130.331001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTTATAATGTTT-----TTGTT------T---AT--------------------ATCT-----AATTGGGTGATAAGTGCGACGCC-GACATTGTTGTT-G------------------------ACTTT--------CCCTT------------TGTTCAT-----------G-----------------TTT-----GATG--T--------------------TTAATTTATTTTGGCAACAATTG-----------GTGT------------GTTTTGGCCTCGTACTTATTG---------------AAACAC---------CCGCAC----------CT------------ACAC-CTACATTTACA--CCCA-----------CACCTAAA------------CACAT----TC----------------------------------------------------ATAACC--AAAACCAACA---------------ACCACAACAACAAACTATTGATTAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAATTCAACACTATCAGCA...............................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAACAACAAACTATTGATTAG......................................................................................................................................................2411.001000010
droGri2
TGAA---TGTTA-ATATTTGTTTATATTTGTAAG--------------------TTTG-----CAATTGATTGCGTGTGCGACGCCAGCG--CGATAG---------------------------------------------------------------------------A-TTT---------------------TGCG--T--------------------------------TGCAACTATCGGTAGTTT------------------TCGTATTGGCCTCGCAGTTG---------CACTTACTT----TTG---CACATCCACAT-----------------------------CCACACACACA--TGCACACATATA---CACAT------------------------ACGCACATTCATTTCACACCCCCACATATAAAAAAGAGACACACACACCTATTCATAACA------ACAACA---------------ACCACAACAACAAACTATTGATTAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---.............1811.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAAC.................2011.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACA------ACAACA---------------ACCACAACAACA...................................................................................................................................................................2460.17110
droWil2
CTA----TAT-----------TTTAGATA---ACTTTAAGCACACTTAATACAGGACA-----AAC-----------------TCC-------------------------------------------------------------------------GGCACTTTTA---------------------GTGAAAACGGATAAT--GGATTTCA------------------------------ATTG-TTGCGCATGGGTACGGCCA---CAAC-GACGGG--------------------------------------------------------------------------------------TCCG--CCCA-----------CTGTTACACAGACCATAACAC----AGAC------C-------------------------------------A---------ATAGCA---ACAACA------------------ACAACAA----------------------------------------------TAGTAATACAAC--AACCACATCAAATCATCCCA-CAAC-CACAC---------------------AGATACGTCTAC-----A---AACTGTG---CCGGCTGCA---GCTGTA-------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................TACAGGACA-----AAC-----------------TCC-------------------------------------------------------------------------GGCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
................................................ATACAGGACA-----AAC-----------------TCC-------------------------------------------------------------------------GGCACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..............................................TAATACAGGACA-----AAC-----------------TCC-------------------------------------------------------------------------GGCACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
....................................................................................................................................................................................................................................................................GTACGGCCA---CAAC-GACGGG--------------------------------------------------------------------------------------T.......................................................................................................................................................................................................................................................................................................................2020.50101000
..............................................................................................................................................................................................GTGAAAACGGATAAT--GGATTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----A---AACTGTG---CCGGCTGCA---.............1920.50110000
..................................................................................................................................................................................................AAACGGATAAT--GGATTTCA------------------------------ATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100010
.......................................................................................................................................................................................................................................................................CGGCCA---CAAC-GACGGG--------------------------------------------------------------------------------------TCC.....................................................................................................................................................................................................................................................................................................................1920.50101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGTCTAC-----A---AACTGTG---CCG......................2120.50110000
...................................................................................................................................................................................................AACGGATAAT--GGATTTCA------------------------------ATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100010
dp5
AAT----CAT-----------TTTAATTA---TTTTTGACTTCAATTTGT----------------------------T----------------------------------------------------------------------TGTGTTTCCTCTTTCTTCTT---------------------CTTTATCCACGCATA--CGCTTTGAAT------------------------------CA-C-------------------------------------------------------TA-----------------------------------------------------G-------------------------GCG------AA------------AATAC----CA----------------------------------------------------ACAACA---ATAACAACA---------------TCCAAAACAA------------------------CAACAACAACAACAGTAAC---------------------------------------------------------------------------------------AAGACCAACA-CAACAACA---ACAACA-------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................ATA--CGCTTTGAAT------------------------------CA-C-------------------------------------------------------TA-----------------------------------------------------G-------------------------......................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------CAACAACAACAACAGTAAC---------------------------------------------------------------------------------------A..................................2350.2010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACAA------------------------CAACAACAACAACA...............................................................................................................................22180.0610100000000
droPer2
AAT----CAT-----------TTTAATTA---TTTTTGACTTCAATTTGT----------------------------T----------------------------------------------------------------------TGTGTTTCCTCTTTCTTCTT---------------------CTTTATCCACGCATA--CGCTTTGAAT------------------------------CA-C-------------------------------------------------------TA-----------------------------------------------------G-------------------------GCG------AA------------AATAC----CA----------------------------------------------------ACAACA---ATAACAACA---------------TCCAAAACA-----------------------------------------------------------ACAACAACAACAA-------------------------------------------------CAACAGTAACAAGACCAACA-CAACAACA---ACAACA-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GTAATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAC--------------------------------------------------------------------------------------------------------------------------------------------------------CACTAGTAACAACAATACAAGCAATAGCAATAGCAACAGCAACAACAGCG---------------AGAACAACAACATGCTACTCTTTCACCAA--------CATTACCATCAGCAA------------------------------------------------------------------------------------CAGCAAGACCAA---CAGCAACT---ACAACGCCTGGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAGCG---------------AGAA...........................................................................................................................................................................2311.001000001
droBip1
TTAATCTCGTTT-----TTATTAAGTTAC---T-----------------------AT-ATCTTTTTGGATAATTCGTTTGAGGTTATAA-----------------ACAAAAAAGTACATCTCTAACTT--------CCGTG------------TGGGAAT-----------G-----------------------------------------------------------------------TGTG-TTGTGCCTTGCCAC-----------------------TAAGCCG---------ATTTAGTTGAGAATTTCGCCA-------------------CA------------ACAA-GAACACACACA--CACACACACACA---CACAT------------------------ACAGAGA----------------------------------------------------------------GACATTGGGAACAACAACTAGAACATGTTTCGAGAGCCTGACACACATACCAACACACTCAG---------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTG----CAC-----------GCGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------CA---------------------------------------------------------------------------------------------------------------------------------------------CATAT------------------------AA----------------------------------------------------------------TCAGAA---------------ATATTACCAACAAACTATTGATCAGCAAACCATTCAACACTATCAGCAGCAACTGGCTGCGCAG------------------------------------------------------------------------------------------CAACA---GCAACA-------SizeHit CountTotal NormTotal
No Reads
droFic1
TTA----AAT-----------AAGCAATG---AGTTT--------------------------GTCT-----CCCAACGAGACA----------------------AA-----------------------------------------------------A-----------AAAAATATATATGTATAA-AAAAAAGGAAAAAGGTTC--GGGGCGGTCGCACA-------------------A-----------TTGG-------C---ACTT-GAAAGGCATCAA-----------------------------------------------------------------------------------------------------GATAC-------------------------A----------------------------ATGGCAATA---------------ACTGCA---GCAGCA------------------ACATCAC----------------------------------------------CAGCAACACAGC--AGCGGCGGCAAACAAGCTAAACAAGTATTGC---------------------CGCTGTGCCGAG-----A---AGCAGCAG---CAGCAACAACAACAGC--------SizeHit CountTotal NormTotal
No Reads
droEle1
GCCACAACCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT-------------------------------------------------------------------------TCGCAACA-----------------ACA------AG------------CACAC----CA----------------------------------------------------ACAACA---ACAACA------------------ACAACAACAACAGCCACCTCAATTGCTGCCCACACA---------------------------TC--AGT----------------------------TTGCACACTTGTCTTCCTTTGTGACACCAA--CAGCAGC---AGCGGCAGCAGCAGCAGCA---GCAGCG-------SizeHit CountTotal NormTotal
No Reads
droRho1
CG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACTACTAAT-GATA---------------------------------------------------------------ATAAACA-T---------------------------------------------------------------------------------------------------------------------------------------CACCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCTCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------SizeHit CountTotal NormTotal
No Reads
droBia1
TTGCTAA-----------------TCTTA---AG--------------------GACC-----ATCTTAGTGGTTAGTGCGATGCCAGAC--CGG-----------AA-----------------------------------------------------C-----------G-----------------------------------------------------------------------CTTG-TAGCTTA-------AACACAAAC-CCCTACTGGCACCGCACTAATGATG----CACTAATAA----C--------------------------------------------------GAAACA-C---------------------------------------------------------------------------------------------------------------------------------------CATCAACACCCTATTGATCAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCTCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------SizeHit CountTotal NormTotal
No Reads
droTak1
CCATCAATGCTCACTAATTGCTAATCTTA---AG--------------------GACC-----CATCTAGTGGTTAGTGCGATGCCAGAT-TCGAAAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-GACTGGCATCGCACTAATTGTG----CACTAATAA----T--------------------------------------------------TAAACA-C--------------------------------------------CA----------------------------------------------------TC-----------------------------------AACCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAACTGGCTGCTCAG------------------------------------------------------------------------------------------CAACA---ACAACA-------SizeHit CountTotal NormTotal
No Reads
droEug1
GTT----CAT-----------GTTCATCA---GGCTT--------------------------TTCTTTTTCATCAGCGCGGCGGCGAAAAGCGAGAAGCGAGCGTAA---------ACACTTT--GCTTTCATACGTCGCGACGTTCGTGTTGTTG----TGTTGTTT-------------------------------------------------------------------------------------------------------------------ATGGCAACAACTAC-ACGT---------------------------------------------------------------AGCAACACC--CA----CG------GCAGCAG------------CACAG-----C----------------------------------------------------ACAGCA---GAAGCAGCA---------------GCAGCAG-------------------------------------------------CAGCACAGCACAGCAGAAGCGGCAA-------------------------------------------------------C---AGCAGCAGCAGCAGCAACA---ACAGCA-------SizeHit CountTotal NormTotal
No Reads
dm3
TTA------------------------------------------------------------------GTGGTTAGTGCGATGCCAGACATCGAGAGTCAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATGAACATC---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................GTTAGTGCGATGCCAGACATCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000100000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................ATC-GACTGGCATCGCACTA....................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTGCTCAGC--AACAACAACAAG................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--AACAACAACAAGTA-------------------------------------------------------C---AAC................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTCAACACTATCAGCA...............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTCAACACTATCAGCAGCAAT..........................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCAAACAATTCAACACTATCAGC................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
......................................................................TGGTTAGTGCGATGCCAGACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................CAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
........................................................................GTTAGTGCGATGCCAGACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCTGCTCAGC--AACAACAACAAG................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---A..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................CCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGCTGCTCAGC--AACA........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATTGGCTGCTCAGC--AA..........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TATTGTTGTAGCCC---AATC-GACTGGC.............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGCTGCTCAGC--AAC.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TAAT-GCTA---------------------------------------------------------------ATGAACATC---------------------------------------------------------------------------------------------------------------------------------------CATC.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACAATTCAACACTATCAG.................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GTTAGTGCGATGCCAGACATCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACACTATCAGCAGCAATTGGC......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAATTCAACACTATCAGCAGC.............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TTG-TAGTGTATTGTTGTAGCCC---AATC-....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................C---AATC-GACTGGCATCGCACTA....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATTGGCTGCTCAGC--AACA........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TGGCATCGCACTAATAAT-GC............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCA...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTATTGATCAGCAAACAA...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTCAGC--AACAACAACA..................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATTGGCTGCTCAGC--AAC.........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAGCAGCAATTGGCTGC...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAATTCAACACTATCAGCAG..............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTGGCTGCTCAGC--AACAACAAC...................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCAACACTATCAGCAGCA............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TGGTTAGTGCGATGCCAGACATCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ACATC---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGA..........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGCTGCTCAGC--AACAACAACAAGT...............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAG..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTGCTCAGC--AACAACAACAAGT...............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAAC..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAGCAGCAATTGGCTGCTCAGC--AAC.........................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACA...............................3011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATTG-TAGTGTATTGTTGTAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AA.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGC.............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GAGAGTCAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------AT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAGTA-------------------------------------------------------C---AACAGCAACA.........................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTT----CGT-----------TAGTATTA---AG--------------------GACT-----ATCTTAGTGGTTAGTGCGATGCCAGACATCGGGAGTCAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATGAACACC---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................A---AG--------------------GACT-----ATCTTAGTGGTTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
droSec2
TTT----CGT-----------TAGTATTA---AG--------------------GACT-----ATCTTAGTGGTTAGTGCGATGCCAGACATCGGGAGTTAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATGAACACC---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................GTTAGTGCGATGCCAGACATCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AAC................................2611.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGCTGCTCAGC--AACAAC......................................................................................................2111.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTGGCTGCTCAGC--AAC.........................................................................................................2011.0010010
droYak3
TAT--------------------------------------------------------------CTTAGTGGTTAGTGCGATGCCAGACATCGAGAATCAAGCCAAA-----------------------------------------------------T-----------G-----------------------------------------------------------------------ATTG-TAGTGTATTGTTGTAGCCC---AATC-GACTGGCATCGCACTAATAAT-GCTA---------------------------------------------------------------ATAAACA-T---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTGATCAGCAAACAATTCAACACTATCAGCAGCAATTGGCTGCTCAGC--AACAACAACAAGTA-------------------------------------------------------C---AACAGCAACAGTTGCAACA---ACACCA-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAAGTA-------------------------------------------------------C---AACAGCAACA.........................2422.00400000000004
........................................................................GTTAGTGCGATGCCAGACATCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACAATTCAACACTATCAGT................................................................................................................................2211.00100000100000
................................................................................................................................................................................................................................................................................................................................................................................AAACA-T---------------------------------------------------------------------------------------------------------------------------------------CATCAACCAACTATTG...........................................................................................................................................................2211.00100100000000
droEre2
TTCATAATGTTC----------------G---CCT-------------------------------------GTTAGTTCAATA---------------------------------------------------AATCAGGACATGTATGCGATTGGCCATGCTTGTTCTAGA-A----------------TTAACCAAACG--TGTTC--C-------------------------------------------------------------------TGGCCACGCAACCC---------CACCCCCTCAGACTGCCGCC-----CAAAACCACCCCCACGTACCGCCCCAGATACAA-G------AACA--AATG-----------CAAATTCAAACACAAACACAA----AGAC------A----------------------------------------------------------------------------------------------------------------GGCAGCAAAAGCAG------------------------------------------------------------------------------------------C---AGCAGCAGCAACAGCAACG---GCAACA-------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................GTTCTAGA-A----------------TTAACCAAACG--TGTTC--C-------------------------------------------------------------------T................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCAG------------------------------------------------------------------------------------------C---AGCAGCAGCA.........................19200.2552000120
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAG------------------------------------------------------------------------------------------C---AGCAGCAGCA.........................18200.1022000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGCAG------------------------------------------------------------------------------------------C---AGCAGCAGC..........................19200.1020000020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGCAG------------------------------------------------------------------------------------------C---AGCAGCAGCA.........................20200.0510000010

Generated: 05/16/2015 at 09:28 PM