ID:

dvi_13730

 Coordinate:

scaffold_12970:9270137-9270216 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_4332:1]; exon [dvir_GLEANR_4332:2]; CDS [Dvir\GJ19436-cds]; CDS [Dvir\GJ19436-cds]; intron [Dvir\GJ19436-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------##################################################
AAGTTTGGTGGTAAGGTGCCCGAGGGAAGCTTCAAGATGCCGGAAACTGGGTAAGTGTGTGTTGGCCGCTCCCTTAAGGTGCACGACATTTTCATATATGTATATGCATACTTGTTTGCTCTGGGTGCAGTAGTAAATGTCCCTTTGGCGGTGATGCCGGGGCCAAGGCAAAGCCAACCG
**************************************************...........(((..(((((...(((((((((..((((........))))...))))).))))........))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M061
embryo
 M027
male body		 SRR060672
9x160_females_carcasses_total
 V047
embryo
 M047
female body
 SRR060659
Argentina_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060671
9x160_males_carcasses_total
 SRR060666
160_males_carcasses_total
 M028
head
 SRR060664
9_males_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060660
Argentina_ovaries_total
 SRR060657
140_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 GSM1528803
follicle cells		 SRR1106730
embryo_16-30h
 SRR060667
160_females_carcasses_total
 V053
head
 SRR060668
160x9_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060655
9x160_testes_total
 SRR1106713
embryo_0-2h
 SRR1106729
mixed whole adult body
 SRR060675
140x9_ovaries_total
 SRR1106714
embryo_2-4h
..............................TTTAAGATTCCGGAACCTGG.................................................................................................................................. 20 3 2 49.00 98 49 16 2 14 1 0 6 0 1 1 0 2 0 1 1 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TTAAGATTCCGGAACCTGG.................................................................................................................................. 19 3 9 31.44 283 139 21 3 2 2 31 7 4 9 10 5 6 15 0 2 3 1 5 1 0 1 2 4 0 0 2 3 2 2 0 1 0 0 0 0 0
.................................AAGATTCCGGAACCTGGAT................................................................................................................................ 19 3 15 27.33 410 55 9 4 2 29 7 22 42 4 29 43 16 18 20 16 1 15 9 5 12 4 8 12 0 0 6 6 5 2 6 1 0 0 0 2 0
..............................GTCAAGATTCCGGAACCTGG.................................................................................................................................. 20 3 5 25.20 126 13 106 0 4 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTTAAGATTCCGGAACCTG................................................................................................................................... 19 3 7 20.00 140 7 10 108 2 4 0 1 0 0 1 0 0 0 2 0 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTTAAGATTCCGGAAACTGG.................................................................................................................................. 20 3 3 9.00 27 20 1 0 3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AAGATTCCGGAACCTGGATA............................................................................................................................... 20 3 7 6.29 44 12 0 6 1 1 2 1 0 2 2 0 0 2 1 1 1 2 1 0 1 0 0 0 0 0 2 1 1 1 0 0 1 1 1 0 0
..................................AGATTCCGGAACCTGGATA............................................................................................................................... 19 3 13 2.46 32 3 0 4 1 0 1 0 1 1 1 0 0 2 1 1 0 5 3 0 0 2 0 1 0 0 1 1 1 0 1 0 0 0 0 0 1
..............................TTTAAGATTCCGGAACCT.................................................................................................................................... 18 3 20 2.20 44 0 0 39 3 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................CTTTAAGATTCCGGAACCTGG.................................................................................................................................. 21 3 1 2.00 2 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTCAAGATTCCGGAACCTGGAT................................................................................................................................ 22 3 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTTAAGATTCCGGAACCTGGG................................................................................................................................. 21 3 2 1.50 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................AAGATGCCGGAACCTGGATA............................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................TTAAGATTCCGGAACCTGGGT................................................................................................................................ 21 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........GTAAGGTGCCGGAGGGAAGC...................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTCAAGATTCCGGAACCTGGA................................................................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GGTGGTAAGGTGCCCGAGGGA......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTTAAGATTCCGGAAACTGGGT................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................ATCAAGATTCCGGAACCTGG.................................................................................................................................. 20 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GCCAAGGCAAAGCCAACC. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AAATGTCCCTTTGGCGGTG........................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GTTTGGTGGTAAGGTGCCGGA............................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AATGTCCCTTTGGCGGTGATG........................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GGGAAGCTTCAAGATGCCGGAAACT.................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................GTCCCTTTGGCGGTGAT......................... 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTTAAGATTCCGGAACCTGGGT................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............AAGGTGCCGGAGGGAAGCTTCAAG................................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CGGTGATGCCGGGGCCAAGGC........... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTCAAGATTCCGGAACCTGG.................................................................................................................................. 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GAAGCTTCAAGATGCCGGAAACT.................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GGTGGTAAGGTGCCGGAGG........................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GGTAAGGTGCCCGAGGGAA........................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TTTAAGATACCGGAAACTGGAT................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTCAAGATTCCGGAATCTGG.................................................................................................................................. 20 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.AGTTTGGTGGTAAGGTGCCGG.............................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GTTTGGTGGTAAGGTGCCGGAGG........................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TTAAGATTCCGGAAACTGGAT................................................................................................................................ 21 3 3 0.67 2 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TTAAGATTCCGGAACCTGGG................................................................................................................................. 20 3 3 0.67 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTCACGATTCCGGAAACTGGGT................................................................................................................................ 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................TAAGATTCCGGAACCTGGGTA............................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTTAAGATTCCGGAAACTG................................................................................................................................... 19 3 18 0.44 8 0 0 0 0 6 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GATTGGTGGTAAGGTGCCCC.............................................................................................................................................................. 20 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTTAAGATGCCGGAACCTGG.................................................................................................................................. 20 3 6 0.33 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GATTCCGGAACCTGGGTATG............................................................................................................................. 20 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TGAAGATTCCGGAACCTGG.................................................................................................................................. 19 3 10 0.30 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................GACATTTTCATACATGTA.............................................................................. 18 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................TCAAGATGAGGGAAACTGGC................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................TCAAGATTCCGGAACCTG................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGATTCCGGAACCTGGCTA............................................................................................................................... 19 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................GTTAAGATGCCGGAACCTG................................................................................................................................... 19 3 13 0.15 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................ATTCCGGAACCTGGGTATG............................................................................................................................. 19 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CGTAAGGTGCACGGCAATTT........................................................................................ 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CAAGATTCCGGAACCTGGA................................................................................................................................. 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TAGAGGTAAGGTGCCGGA............................................................................................................................................................. 18 3 16 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GTTTGGTGGTAAGAAGGCC............................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................AGATTCCGGAACCTGGCT................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTCAAACCACCATTCCACGGGCTCCCTTCGAAGTTCTACGGCCTTTGACCCATTCACACACAACCGGCGAGGGAATTCCACGTGCTGTAAAAGTATATACATATACGTATGAACAAACGAGACCCACGTCATCATTTACAGGGAAACCGCCACTACGGCCCCGGTTCCGTTTCGGTTGGC
**************************************************...........(((..(((((...(((((((((..((((........))))...))))).))))........))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060672
9x160_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060683
160_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060674
9x140_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060667
160_females_carcasses_total
 V053
head
 SRR1106727
larvae
 SRR060684
140x9_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 GSM1528803
follicle cells		 SRR060668
160x9_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR1106725
embryo_14-16h
 SRR1106729
mixed whole adult body
 SRR060675
140x9_ovaries_total
 M061
embryo
 V116
male body		 SRR060687
9_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060688
160_ovaries_total
.................................................................................................................................................ACCACCTCTACGGCCCCG................. 18 2 4 21.00 84 16 48 5 5 1 0 1 3 1 0 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0
.................................................................................................................................................ACCACCACTACGGCCCCT................. 18 2 9 9.33 84 59 7 3 4 0 0 3 1 2 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................AAACCACCTCTACGGCCCC.................. 19 2 3 3.00 9 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCGCCTCTGCGGCCCCGG................ 19 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAAACCACCTCTACGGCCCC.................. 20 3 5 1.00 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCTGTTCC............ 23 3 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AACCGCCACTACAGGCCCGG................ 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCACTGCGGCCCCA................. 18 3 20 1.00 20 8 7 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCGCCTCTGCGGCCCCA................. 18 3 20 0.60 12 0 0 3 0 0 0 7 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCGTTT.............. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCGG................ 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AAACCACCTCTGCGGCCCC.................. 19 3 16 0.38 6 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0
.................................................................................................................................................ACCACCTCTACGGCCCCCGTT.............. 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCGCCTCTACGGCCC................... 16 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCGCCTCTGCGGCCCC.................. 17 2 9 0.33 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATACCACCTCTACGGCCCC.................. 19 3 17 0.29 5 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GAAACCACCTCTACGGCCCCT................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCTGTT.............. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................AAACCACCTCTACGGCCC................... 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCGGTC.............. 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCGTT............... 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTGCGGCCCCGG................ 19 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AAACCACCCCTACGGCCCCT................. 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................ACCGACGAGGGAAGTCCATG.................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCGGG............... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AACCACCTCTACGGCCCCGC................ 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................ACCGCCCCTACGGCCCCA................. 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCCGT............... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTGAACCAACGAGTCCCAC..................................................... 19 3 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCGCCTCTACGGCCCT.................. 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................TTCTAAGGCCTTGGACCTA................................................................................................................................ 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................AAAACACCTCTACGGCCCC.................. 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAAACCACCTCTACGGCCC................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................ACCACCCCTACGGCCCC.................. 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ACACCACCCCTACGGCCCC.................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACCACCTCTACGGCCCCGT................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:9270087-9270266 + dvi_13730 AAGTTTGGTGGTAAGGTGCCCGAGGGAAGCTTCAAGATGCCGGAAACT---------GGGTAAGTGTGTG--TTGGC--CGCTCCCTT-------------------AAGGTG----C---------------------ACG---------------------------------------------------A----CATTTTCATATATGTATA---------------------------------------------------------------------------TGCATACTTG------------------------TTTGCTCTG----------------------------GGT-G---CAGTAGTAAATGTCCCTTTGGCGGTGATGCC---G---GGGCCAAGGCAAA---GCCAACCG----
droMoj3 scaffold_6473:13377807-13377999 - AAGTTCGGCGGTAAGGTGCCTGAGGGCGATTTCAAGATGCCGGACGCT---------GGGTAAGTGTGTG------------------------------TTTA-TGTGT--G-----------------------------------------------------------------------------------------------------TGTG----TGTGCG----------TGCGC--------GTAATAGCTGGGTAATCCAAATCCTTGC---AA------GTTT-------------TTCTT-AA-----------ATATTC------------TCTGCTT-------------------GTTTAGCAAATGCCCTTTCGGTGGCGATGCC---G---GTTCCAAGGCGAA---GCCGGCTT----
droGri2 scaffold_14853:5999133-5999306 + AAGTTCGGTGGCAAAGTGCCTGAAGGTGAATTCAAA---CCGGAAGC---------TGGGTAAGTGTGTG----------------------TGTGTGTG----------G-C--G-A---------------------GT-----GTGTAGCTAGTGTTTCTGCATGT--GTGCGT----------T-----A----CATTTTC-------------------------------------------------------------------------------------------------------------------------TTTTCCATTCC-------ATTTTTT----TT-------T-TTTGCAACAGCAAATGCCCCTTTGCCGACGAGAAT---G------------AAAA---GCC---------
droWil2 scf2_1100000004909:11784690-11784854 + AAATTTGGTGGTAAAGTGCCTGAGGGGGAATTCAAAATGCCGGATGCTGCTGCCGGGGGGTAAGTTCTTA--------------------------------A------------------------------------CCTATG-------------AT---ACAAGCGGACGCGT----------C-----A----CGCTTTA-----------------------------------------------------------------------------------------------------------------------------------C-------TAAATAT----TT-------A-C---TTGCAGCAAATGTCCATTCGGTGGCGATGCC------------AAAGCTAA---GCCGGCTCCTCC
dp5 XL_group1a:8833358-8833571 + AAGTTTGGCGGCCAGGTTCCGGCAGGCGACTTCAAGATGCCAGACGCCGCTGCAGGCGGGTAAGTT---GTGGTTGT--GGCCCCCTCCACG-----TTC--GC-GCATTCCG----C---------------------ACATTTTTCGCAC-------------------------------------------------------ATACATACATA----TGT---------------------------------------------------------------------------------------------AC---AATTTT-TTT---------TC---GCCTTTTTGCTAATCGAAAT---TTCCAGAAAATGCCCGTTCGGCGGCGATGCC---G---GTCCCAAATCGAA---ATCGGCCG----
droPer2 scaffold_15:1230512-1230706 + AAGTTTGGCGGCCAGGTTCCGGCAGGCGACTTCAAGATGCCAGACGCCGCTGCAGGCGGGTAAGTT---G---------------------------TTC--GC-GCATTCCG----T---------------------ACATTTTTCGCAC-------------------------------------------------------ATATGTACATA----TGT---------------------------------------------------------------------------------------------AC---AATTTTTTTT---------TC---GCTTTTTTGCAAATCGAAAT---TTCCAGAAAATGCCCGTTCGGCGGCGATGCC---G---GTCCCAAATCGAA---ATCGGCTG----
droAna3 scaffold_13047:153585-153766 - AAGTTCGGCGGAAAGGTCCCGGCCGGTGATTTCAAGATGCCCGACGCCGCCGCTGGCGGGTAAGTGCTTT--------------------------------TA-TCTAGTTT----A---------------------ACACGTTT------------------------------------------CAT---------------TCAA------------------------------------------------------------ATGCCAGC---ACCCTTA-ACGCATCCTTT-------------G-----------CT-------------------GTTT----TT-------T-TCCTCACCAGAAAGTGCCCCTTCGGCGGCGATGCC---G---GTGGCAAAGGCAAG--------------
droBip1 scf7180000396425:296980-297163 - AAGTTCGGCGGAAAGGTTCCGGCCGGCGATTTCAAGATGCCCGACGCCGCCGCAGGCGGGTAAGTGTTTA----------------------TACCT--------AGT--T-C--A-A---------------------GTG-TTAT------------------------------------------ACC---------------TTAA------------------------------------------------------------GTGCCTGC---CCCCTTACACGCATTCTTT-------------G-----------CC-------------------GTTT----TT-----GGT--CACCACTAGAAAGTGCCCCTTCGGCGGCGATGCT---G---GTGGACAAGACAAG--------------
droKik1 scf7180000302344:195237-195423 - AAATTCGGTGGCAAGGTGCCGGCGGGTGACTTCAAGATGCCCGACGCCTCTGCCGGAAGGTAAGTGCTTG--T-CCCGCCACTCC----------------------------------------------------------------------------------------------CCCCCTGGCACACAATCAAGGCTTTA--------------------------------------------ATCTAATAAC--------------------------------TGAATGA---------------------------------------------------TT----CT-------C-T---TTGCAGCAAGTGCCCCTTTGGTGGCGATGCC---A---GTGCAAAGGCCAATAAGCCGGCTT----
droFic1 scf7180000453901:785416-785620 - AAGTTCGGGGGCAAGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCTGCCGGAGGGTAAGTCTCGC----------------------TCCCT--------AATCC------------TAAGTCCGTTAGTGGCT------AG-----------------------------------------------------------------------------------------------------------------------------------C---GCACGTATATGCATTATTAACGGCCATTCT-CA-----------TC--------------GT---GTATTCTTGCGTTTCGAT-A---ACTTAGAAAGTGCCCGTTCGGTGGCGACGCCGCCG---GTGCAAAGGCCAAAA-------------
droEle1 scf7180000490996:940001-940212 + AAGTTCGGGGGCACGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCCGCCGGAGGGTAAGTTT------------------------------GCCCC---CA-----------------------------------------------------------------------------------------------------TACATACATA----TATACTATATTTACCCCATTTGCTTTACTTTAATA-----------------ACGCTTTAA------T-------------------------TGTATTTTGTTATGCCCTTTCC-------CCTGGTT----GT-------T-TGTGCCTCAGAAAGTGCCCATTTGGTGGCGATGCT---G---GTGCAAAGGCCAAGA-------------
droRho1 scf7180000779334:1059951-1060151 - AAGTTCGGGGGAACGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCCGCCGGAGGGTAAGTT---G---------------------------TCC--A--AATATATA-----------------------------------------------------------------------------------------------------TGTACATAT---CCCCATTTATACCGTACGATATAC--------------------------------------------ACCAGCAATGCCTTTTTC-TA-----------ACGTTTTT--T---C-T-T--GGTT---------TCACC-A---CCTCAGGAAGTGCCCATTTGGTGGCGATGCA---G---GTGCAAAGGCCAAGA-------------
droBia1 scf7180000302126:1408881-1409093 - AAGTTCGGGGGCAAGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCCGCCGGGGGGTAAGTT---G---------------------------CAGCCGA-AATAT--GGCAAATAC---------CCCACAGAT----T--------------------------------------------------------------------------------------------------------------ATAGATAACTCAGCCAAACCATGGACTAA------CACCT-------------CTCTT-CA-----------ATGCTCTTCCT-------TGGCCTA----AT-------C-A---TCGCAGCAAGTGCCCGTTTGGCGGCGATGCT---G---GTGCCAAGGCCAAGAAGCCG--------
droTak1 scf7180000415078:340076-340295 + AAGTTCGGGGGCACGGTGCCGGCTGGTGATTTCAAGATGCCCGACGCCTCCGCCGGAGGGTAAGAATTTC----------------------TCTTA--------AATCT-CG----ATTG---------CCTGTAGTT----TGTGTGCACCTAAGTATTGCC--------------------------------------------------CATG----AGT--------------------------------------------------------AA------CATCT-------------ATTTT-TC-----------CTACTTTTAC--------TCCGCGT-------------T--TATCAATAGCAAGTGCCCGTTTGGTGGCGATGCCGCTGGTGGGGCAAAGGCCAAAAAGCCGGCTT----
droEug1 scf7180000408900:65300-65495 - AAGTTCGGGGGCAAGGTGCCGGCTGGTGATTTCAAGATGCCCGACGCCTCGGCCGGAGGGTAAGTTT------------------------------TTCCCGAAAATATTTA----A---------------------ATA-TTAT------------------------------------------CAT---------------ATAAACAT-AT----------------------------------------------------------------------------AGCATGGAAAACCATTCGATA-----------CTG---ATTTTCTTATTC---GTTT----AT------AT-T---AATTAGCAAATGTCCATTTGGTGGCGACGCT---G---GTGCAAAGGGCAACA-------------
dm3 chrX:3693400-3693572 + AAGTTTGGTGGCACGGTGCCGCCTGGCCAATTCAA------CGGTGGCAGCGCCGGAGGGTAAGTT---A---------------------------ACC--GA-ACTATTTG----A---------------------CCAATTCT------------------------------------------CAA---------------AACAACACGAT-------------------------------------------------------------------------------------------------TGTAT---GATTTGCTCATCCC-------GCGGCTT----GT-------T-C---TTCCAGCAAGTGCCCATTCGGCGGTGTTGCT---G---GTGCCAAGGCCAAC--------------
droSim2 x:3391246-3391428 + AAGTTTGGTGGCACGGTGCCGCCTGGCCAATTCAA------CGGTGGCAGCGCCGGAGGGTAAGTT---A---------------------------ACC--GC-ACTATTTG----A---------------------CCAATTTT------------------------------------------CAA---------------AACAACACGAT-------------------------------------------------------------------------------------------------TGTAT---GGTTTGCTCATCCC-------GCGGCTT----GT-------T-T---TTCCAGCAAGTGCCCATTCGGCGGCGATGCT---G---GTGCCAAGGCCAACGAGCCGGCCA----
droSec2 scaffold_1119:732-914 + AAGTTTGGTGGCACGGTGCCGCCTGGCCAATTCAA------CGGTGGCAGTGCCGGAGGGTAAGTT---A---------------------------ACC--GC-ACTATTTG----A---------------------CCAATTTT------------------------------------------CAA---------------AACAACACGAT-------------------------------------------------------------------------------------------------TGTAT---GGTTTGCTCATCCC-------GCGGCTT----GT-------T-T---TTCCAGCAAGTGCCCATTCGGCGGCGATGCT---G---GTGCCAAGGCCAACGAGCCGGCCA----
droYak3 X:4726863-4727070 - AAGTTCGGGGGCACGGTGCCGCCTGGCGAATTCAA------CGAAGACAGCGCCGGAGGGTAAGTT---A---------------------------CCC--GT-AATATTTA----A---------------------GTATTATT-------------CTTCCGTAT--C-GCATAATCCCCTGTCCCAC---------------AATAACATTAC-------------------------------------------------------------------------------------------------TGCAT---TG-TTGATCATCCC-------GCGGCTT----GT-------C-T---TTCCAGCAAGTGCCCCTTCGGTGGCGATGCT---G---GGGCAAAGGCCAAAGTGCCGGCTT----
droEre2 scaffold_4690:1074864-1075060 + AAGTTCGGTGGCAAGGTGCCGCCTGGCCAATTCAG------CGATGGCGGTGCCGGAGGGTAAGTT---A---------------------------CCC--GT-AATATTTG----ACTGCTAATTCACCTTGTGGGT------GT----------------------------------------CCCAC---------------AATAACATCAC-------------------------------------------------------------------------TGCATCATT-----------G--------------TTGCTCATCAT---C-T-T--GGCTCCTTGT-------C-T---TTCCAGCAAGTGCCCCTTCGGTGGCGATGCT---G---GTGCAAAGGCCAAAG-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AAGTTTGGTGGTAAGGTGCCCGAGGGAAGCTTCAAGATGCCGGAAACT---------GGGTAAGTGTGTG--TTGGC--CGCTCCCTT-------------------AAGGTG----C---------------------ACG---------------------------------------------------A----CATTTTCATATATGTATA---------------------------------------------------------------------------TGCATACTTG------------------------TTTGCTCTG----------------------------GGT-G---CAGTAGTAAATGTCCCTTTGGCGGTGATGCC---G---GGGCCAAGGCAAA---GCCAACCG----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......GGTGGTAAGGTGCCCGAGGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGCAAA---GCCAACC.....1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................AAATGTCCCTTTGGCGGTG........................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AATGTCCCTTTGGCGGTGATG.....................................2111.001010000000000000000000000000000000000000000000000000000000000000
.......................GGGAAGCTTCAAGATGCCGGAAACT---------...........................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTCCCTTTGGCGGTGAT......................................1711.001000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................................................................................................CGGTGATGCC---G---GGGCCAAGGC..................2111.001000000000000010000000000000000000000000000000000000000000000000
.........................GAAGCTTCAAGATGCCGGAAACT---------...........................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.........GGTAAGGTGCCCGAGGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAGTTCGGCGGTAAGGTGCCTGAGGGCGATTTCAAGATGCCGGACGCT---------GGGTAAGTGTGTG------------------------------TTTA-TGTGT--G-----------------------------------------------------------------------------------------------------TGTG----TGTGCG----------TGCGC--------GTAATAGCTGGGTAATCCAAATCCTTGC---AA------GTTT-------------TTCTT-AA-----------ATATTC------------TCTGCTT-------------------GTTTAGCAAATGCCCTTTCGGTGGCGATGCC---G---GTTCCAAGGCGAA---GCCGGCTT----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................GTAATAGCTGGGTAATCCAAATCCT................................................................................................................................................................2511.001100000
.........GGTAAGGTGCCTGAGGGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................G---GTTCCAAGGCGAA---GCCGGC......2011.001100000
.............................TTTCAAGATGCCGGACGCT---------GG.........................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
AAGTTCGGTGGCAAAGTGCCTGAAGGTGAATTCAAA---CCGGAAGC---------TGGGTAAGTGTGTG----------------------TGTGTGTG----------G-C--G-A---------------------GT-----GTGTAGCTAGTGTTTCTGCATGT--GTGCGT----------T-----A----CATTTTC-------------------------------------------------------------------------------------------------------------------------TTTTCCATTCC-------ATTTTTT----TT-------T-TTTGCAACAGCAAATGCCCCTTTGCCGACGAGAAT---G------------AAAA---GCC---------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAATTTGGTGGTAAAGTGCCTGAGGGGGAATTCAAAATGCCGGATGCTGCTGCCGGGGGGTAAGTTCTTA--------------------------------A------------------------------------CCTATG-------------AT---ACAAGCGGACGCGT----------C-----A----CGCTTTA-----------------------------------------------------------------------------------------------------------------------------------C-------TAAATAT----TT-------A-C---TTGCAGCAAATGTCCATTCGGTGGCGATGCC------------AAAGCTAA---GCCGGCTCCTCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.AATTTGGTGGTAAAGTGCCTGAGGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200200
......GGTGGTAAAGTGCCTGAGGGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200
...TTTGGTGGTAAAGTGCCTGAGGGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200110
................................CAAAATGCCGGATGCTGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...................CTGAGGGGGAATTCAAAATGC............................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................................AAAATGCCGGATGCTGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................ATGTCCATTCGGTGGCGATGCC------------AAAGC..................2711.00100010
..........GTAAAGTGCCTGAGGGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................AAAATGCCGGATGCTGCTGCC..............................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................GATGCC------------AAAGCTAA---GCCGGCT.....2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................GCAAATGTCCATTCGGTGGC.........................................2011.00101000
..ATTTGGTGGTAAAGTGCCTGAGGGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..................................AAATGCCGGATGCTGCTGCC..............................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
................................................................................................................................................................................................................................................................................................................................................C-------TAAATAT----TT-------A-C---TTGCAG............................................................1820.50100010
dp5
AAGTTTGGCGGCCAGGTTCCGGCAGGCGACTTCAAGATGCCAGACGCCGCTGCAGGCGGGTAAGTT---GTGGTTGT--GGCCCCCTCCACG-----TTC--GC-GCATTCCG----C---------------------ACATTTTTCGCAC-------------------------------------------------------ATACATACATA----TGT---------------------------------------------------------------------------------------------AC---AATTTT-TTT---------TC---GCCTTTTTGCTAATCGAAAT---TTCCAGAAAATGCCCGTTCGGCGGCGATGCC---G---GTCCCAAATCGAA---ATCGGCCG----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................TCAAGATGCCAGACGCCGCTGCAGGCGG.........................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCAAATCGAA---ATCGGCC.....2011.0010100000000
...........................GACTTCAAGATGCCAGACGCC....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................TTCAAGATGCCAGACGCCGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................CAGGCGGGTAAGTT---GTGGTTGT--G....................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................TCAAGATGCCAGACGCCGCT.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..GTTTGGCGGCCAGGTTCCGGCAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
AAGTTTGGCGGCCAGGTTCCGGCAGGCGACTTCAAGATGCCAGACGCCGCTGCAGGCGGGTAAGTT---G---------------------------TTC--GC-GCATTCCG----T---------------------ACATTTTTCGCAC-------------------------------------------------------ATATGTACATA----TGT---------------------------------------------------------------------------------------------AC---AATTTTTTTT---------TC---GCTTTTTTGCAAATCGAAAT---TTCCAGAAAATGCCCGTTCGGCGGCGATGCC---G---GTCCCAAATCGAA---ATCGGCTG----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................AAGATGCCAGACGCCGCTGCA..............................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droAna3
AAGTTCGGCGGAAAGGTCCCGGCCGGTGATTTCAAGATGCCCGACGCCGCCGCTGGCGGGTAAGTGCTTT--------------------------------TA-TCTAGTTT----A---------------------ACACGTTT------------------------------------------CAT---------------TCAA------------------------------------------------------------ATGCCAGC---ACCCTTA-ACGCATCCTTT-------------G-----------CT-------------------GTTT----TT-------T-TCCTCACCAGAAAGTGCCCCTTCGGCGGCGATGCC---G---GTGGCAAAGGCAAG--------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................GATGCCCGACGCCGCCGCTGG............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
AAGTTCGGCGGAAAGGTTCCGGCCGGCGATTTCAAGATGCCCGACGCCGCCGCAGGCGGGTAAGTGTTTA----------------------TACCT--------AGT--T-C--A-A---------------------GTG-TTAT------------------------------------------ACC---------------TTAA------------------------------------------------------------GTGCCTGC---CCCCTTACACGCATTCTTT-------------G-----------CC-------------------GTTT----TT-----GGT--CACCACTAGAAAGTGCCCCTTCGGCGGCGATGCT---G---GTGGACAAGACAAG--------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAATTCGGTGGCAAGGTGCCGGCGGGTGACTTCAAGATGCCCGACGCCTCTGCCGGAAGGTAAGTGCTTG--T-CCCGCCACTCC----------------------------------------------------------------------------------------------CCCCCTGGCACACAATCAAGGCTTTA--------------------------------------------ATCTAATAAC--------------------------------TGAATGA---------------------------------------------------TT----CT-------C-T---TTGCAGCAAGTGCCCCTTTGGTGGCGATGCC---A---GTGCAAAGGCCAATAAGCCGGCTT----SizeHit CountTotal NormTotal
No Reads
droFic1
AAGTTCGGGGGCAAGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCTGCCGGAGGGTAAGTCTCGC----------------------TCCCT--------AATCC------------TAAGTCCGTTAGTGGCT------AG-----------------------------------------------------------------------------------------------------------------------------------C---GCACGTATATGCATTATTAACGGCCATTCT-CA-----------TC--------------GT---GTATTCTTGCGTTTCGAT-A---ACTTAGAAAGTGCCCGTTCGGTGGCGACGCCGCCG---GTGCAAAGGCCAAAA-------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAGTTCGGGGGCACGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCCGCCGGAGGGTAAGTTT------------------------------GCCCC---CA-----------------------------------------------------------------------------------------------------TACATACATA----TATACTATATTTACCCCATTTGCTTTACTTTAATA-----------------ACGCTTTAA------T-------------------------TGTATTTTGTTATGCCCTTTCC-------CCTGGTT----GT-------T-TGTGCCTCAGAAAGTGCCCATTTGGTGGCGATGCT---G---GTGCAAAGGCCAAGA-------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAGTTCGGGGGAACGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCCGCCGGAGGGTAAGTT---G---------------------------TCC--A--AATATATA-----------------------------------------------------------------------------------------------------TGTACATAT---CCCCATTTATACCGTACGATATAC--------------------------------------------ACCAGCAATGCCTTTTTC-TA-----------ACGTTTTT--T---C-T-T--GGTT---------TCACC-A---CCTCAGGAAGTGCCCATTTGGTGGCGATGCA---G---GTGCAAAGGCCAAGA-------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAGTTCGGGGGCAAGGTGCCGGCTGGCGATTTCAAGATGCCCGACGCCTCCGCCGGGGGGTAAGTT---G---------------------------CAGCCGA-AATAT--GGCAAATAC---------CCCACAGAT----T--------------------------------------------------------------------------------------------------------------ATAGATAACTCAGCCAAACCATGGACTAA------CACCT-------------CTCTT-CA-----------ATGCTCTTCCT-------TGGCCTA----AT-------C-A---TCGCAGCAAGTGCCCGTTTGGCGGCGATGCT---G---GTGCCAAGGCCAAGAAGCCG--------SizeHit CountTotal NormTotal
No Reads
droTak1
AAGTTCGGGGGCACGGTGCCGGCTGGTGATTTCAAGATGCCCGACGCCTCCGCCGGAGGGTAAGAATTTC----------------------TCTTA--------AATCT-CG----ATTG---------CCTGTAGTT----TGTGTGCACCTAAGTATTGCC--------------------------------------------------CATG----AGT--------------------------------------------------------AA------CATCT-------------ATTTT-TC-----------CTACTTTTAC--------TCCGCGT-------------T--TATCAATAGCAAGTGCCCGTTTGGTGGCGATGCCGCTGGTGGGGCAAAGGCCAAAAAGCCGGCTT----SizeHit CountTotal NormTotal
No Reads
droEug1
AAGTTCGGGGGCAAGGTGCCGGCTGGTGATTTCAAGATGCCCGACGCCTCGGCCGGAGGGTAAGTTT------------------------------TTCCCGAAAATATTTA----A---------------------ATA-TTAT------------------------------------------CAT---------------ATAAACAT-AT----------------------------------------------------------------------------AGCATGGAAAACCATTCGATA-----------CTG---ATTTTCTTATTC---GTTT----AT------AT-T---AATTAGCAAATGTCCATTTGGTGGCGACGCT---G---GTGCAAAGGGCAACA-------------SizeHit CountTotal NormTotal
No Reads
dm3
AAGTTTGGTGGCACGGTGCCGCCTGGCCAATTCAA------CGGTGGCAGCGCCGGAGGGTAAGTT---A---------------------------ACC--GA-ACTATTTG----A---------------------CCAATTCT------------------------------------------CAA---------------AACAACACGAT-------------------------------------------------------------------------------------------------TGTAT---GATTTGCTCATCCC-------GCGGCTT----GT-------T-C---TTCCAGCAAGTGCCCATTCGGCGGTGTTGCT---G---GTGCCAAGGCCAAC--------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................GGCCAATTCAA------CGGTGGCAGCG................................................................................................................................................................................................................................................................................................................................................................................................2232.3370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGGCCAATTCAA------CGGTGGCAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2832.3370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000010000000
.................................AA------CGGTGGCAGCGCCGGAGGC........................................................................................................................................................................................................................................................................................................................................................................................2131.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TGCCCATTCGGCGGTGTTGCT---G---............................2231.3340000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................CGCCTGGCCAATTCAA------CGGTGGCAGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................3031.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAATTCAA------CGGTGGCAGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CAAGTGCCCATTCGGCGGTGTTGC....................................2431.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
............................AATTCAA------CGGTGGCAGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCCAATTCAA------CGGTGGCAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................TGCCCATTCGGCGGTGTTGCT---G---G...........................2331.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CCCATTCGGCGGTGTTGCT---G---GTGC........................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTCGGCGGTGTTGCT---G---GTGCCAAGGC..................2630.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AATTCAA------CGGTGGCAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2330.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................AA------CGGTGGCAGCGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................2030.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCCAATTCAA------CGGTGGCAGCGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................2830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000
........................GGCCAATTCAA------CGGTGGCA...................................................................................................................................................................................................................................................................................................................................................................................................1930.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CAAGTGCCCATTCGGCGGTGTTGCT---G---............................2630.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...........................CAATTCAA------CGGTGGCAGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2230.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAA------CGGTGGCAGCGCCGGAGGC........................................................................................................................................................................................................................................................................................................................................................................................2230.6720000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTCGGCGGTGTTGCT---G---GTGCCA......................2230.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
............................AATTCAA------CGGTGGCAGCG................................................................................................................................................................................................................................................................................................................................................................................................1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000
...TTTGGTGGCACGGTGCCGCCTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2330.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTTGCT---G---GTGCCAAGGCCAAC--------------2530.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGTGCCCATTCGGCGGTGTTG.....................................2130.6720000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GCCCATTCGGCGGTGTTGCT---G---G...........................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................CCATTCGGCGGTGTTGCT---G---G...........................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CAATTCAA------CGGTGGCAGCG................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TCCAGCAAGTGCCCATTCGGCGG..........................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCAA------CGGTGGCAGCGCCGGAG..........................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCGGCGGTGTTGCT---G---GTGCCAAGGCC.................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................AATTCAA------CGGTGGCAGCGCCGGAGGC........................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AATTCAA------CGGTGGCAGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCCAATTCAA------CGGTGGCAGCGCCGG............................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................T---GATTTGCTCATCCC-------GCGGCT......................................................................................2130.3310000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CCAATTCAA------CGGTGGCAGCGCCGGAG..........................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGCTCATCCC-------GCGGCTT----GT-------T-C---T.................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................................................................................................................T---GATTTGCTCATCCC-------GCGGC.......................................................................................2030.3310000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................A------CGGTGGCAGCGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GGCCAATTCAA------CGGTGGCAGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCGCCTGGCCAATTCAA------CGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGCGCCGGAGGGTAAGTT---A---------------------------AC.................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................CCAATTCAA------CGGTGGCAGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCGGTGTTGCT---G---GTGCCAAGGC..................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTCGGCGGTGTTGCT---G---GTGC........................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGGCACGGTGCCGCCTGGCCAA......................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CCGCCTGGCCAATTCAA------C..........................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCCAATTCAA------CGGTGGCA...................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGGCCAATTCAA------CGGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAA------CGGTGGCAGCGCCGGAGGG........................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TGCCCATTCGGCGGTGTTGCT---G---GT..........................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................AA------CGGTGGCAGCGCCGGAGGG........................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................TCAA------CGGTGGCAGCGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................CCAATTCAA------CGGTGGCAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TCCC-------GCGGCTT----GT-------T-C---TTCC..............................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................A------CGGTGGCAGCGCCGGAGGCA.......................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................GGCCAATTCAA------CGGTGGCAGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................CACGAT-------------------------------------------------------------------------------------------------TGTAT---GATTTGCT.........................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................CCAATTCAA------CGGTGGCAGCG................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GGCACGGTGCCGCCTGGCCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTTGCT---G---GTGCCAAGGC..................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAGTTTGGTGGCACGGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCAAGTGCCCATTCGGCGG..........................................1930.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCGGTGTTGCT---G---GTGCCAAGG...................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TCGGCGGTGTTGCT---G---GTGCC.......................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................TGGCCAATTCAA------CGGTGGCAGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GTGCCCATTCGGCGGTGTTGC....................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCCTGGCCAATTCAA------CGGTGGCAG..................................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CAGCAAGTGCCCATTCGGCGG..........................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................GGCCAATTCAA------CGGTGGCAGCGCCGGAGGGTAA.....................................................................................................................................................................................................................................................................................................................................................................................3330.3310000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TCAA------CGGTGGCAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CTGGCCAATTCAA------CGGTGGCAGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ATTCGGCGGTGTTGCT---G---GT..........................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTGCT---G---GTGCCAAGGCC.................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................AT-------------------------------------------------------------------------------------------------TGTAT---GATTTGCTCATCCC-------G...........................................................................................2230.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CCAATTCAA------CGGTGGCAGCGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............................AATTCAA------CGGTGGCAGCGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CATCCC-------GCGGCTT----GT-------T-C---TTCCAGCA..........................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GGCGGTGTTGCT---G---GTGCCA......................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGGCCAATTCAA------CGGTGGCAGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GGTGGCAGCGCCGGAGGC........................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAGTTTGGTGGCACGGTGCCGCCTGGCCAATTCAA------CGGTGGCAGCGCCGGAGGGTAAGTT---A---------------------------ACC--GC-ACTATTTG----A---------------------CCAATTTT------------------------------------------CAA---------------AACAACACGAT-------------------------------------------------------------------------------------------------TGTAT---GGTTTGCTCATCCC-------GCGGCTT----GT-------T-T---TTCCAGCAAGTGCCCATTCGGCGGCGATGCT---G---GTGCCAAGGCCAACGAGCCGGCCA----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................TGGCAGCGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................CC-------GCGGCTT----GT-------T-T---TTCCAG............................................................1911.00110000000000000000
.......................TGGCCAATTCAA------CGGTGGCAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.................................AA------CGGTGGCAGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
droSec2
AAGTTTGGTGGCACGGTGCCGCCTGGCCAATTCAA------CGGTGGCAGTGCCGGAGGGTAAGTT---A---------------------------ACC--GC-ACTATTTG----A---------------------CCAATTTT------------------------------------------CAA---------------AACAACACGAT-------------------------------------------------------------------------------------------------TGTAT---GGTTTGCTCATCCC-------GCGGCTT----GT-------T-T---TTCCAGCAAGTGCCCATTCGGCGGCGATGCT---G---GTGCCAAGGCCAACGAGCCGGCCA----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................AACAACACGAT-------------------------------------------------------------------------------------------------TGTAT---GGTTTGCT.........................................................................................................2420.5010010
droYak3
AAGTTCGGGGGCACGGTGCCGCCTGGCGAATTCAA------CGAAGACAGCGCCGGAGGGTAAGTT---A---------------------------CCC--GT-AATATTTA----A---------------------GTATTATT-------------CTTCCGTAT--C-GCATAATCCCCTGTCCCAC---------------AATAACATTAC-------------------------------------------------------------------------------------------------TGCAT---TG-TTGATCATCCC-------GCGGCTT----GT-------C-T---TTCCAGCAAGTGCCCCTTCGGTGGCGATGCT---G---GGGCAAAGGCCAAAGTGCCGGCTT----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................AATTCAA------CGAAGACAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........................GAATTCAA------CGAAGACAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................GATGCT---G---GGGCAAAGGCCAAAGTGCC.........2611.00100000010000
..GTTCGGGGGCACGGTGCCGCCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.............................ATTCAA------CGAAGACAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................CAA------CGAAGACAGCGCCGGA...........................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..........GCACGGTGCCGCCTGGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...................CGCCTGGCGAATTCAA------CGAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.............CGGTGCCGCCTGGCGAATTC...................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
droEre2
AAGTTCGGTGGCAAGGTGCCGCCTGGCCAATTCAG------CGATGGCGGTGCCGGAGGGTAAGTT---A---------------------------CCC--GT-AATATTTG----ACTGCTAATTCACCTTGTGGGT------GT----------------------------------------CCCAC---------------AATAACATCAC-------------------------------------------------------------------------TGCATCATT-----------G--------------TTGCTCATCAT---C-T-T--GGCTCCTTGT-------C-T---TTCCAGCAAGTGCCCCTTCGGTGGCGATGCT---G---GTGCAAAGGCCAAAG-------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................CGATGCT---G---GTGCAAAGGC..................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................TTCCAGCAAGTGCCCCTTCGGTGGCGATG.....................................2911.0010000010
.AGTTCGGTGGCAAGGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...............GTGCCGCCTGGCCAATTCAG------C..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.................................AG------CGATGGCGGTGCCGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.........................................................................................................................................................................................................................................................................................................................................................................................AAGTGCCCCTTCGGTGGCGATGCT---................................2411.0011000000
...........................CAATTCAG------CGATGGCGGTGCCGG............................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000

Generated: 05/16/2015 at 09:11 PM