dvi_13596

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GACATAACTCCGCGGGGAGATACGACGTTCCAAAACGACATAACTCCTCGGTAAGATATGACGTTCCAAAACGACATAACTCCCCGCGGAGATATGACGTTCCAAAACGACATAGCTCCGCGGGGAGATATGACGTTCCAAAACGACATAACTCCGCGGGGAGATACGACGTTCCAAAATGACATAACTCCCCGCGGAGATATGACGTTCCAAAACGACATAGCTCCGCGCGGAGATATGACGTTCCAAAA ***************************************************************************...(((((((((((.((((.((((....((((.((((.((((....)))).)))).))))....)))).)))).)))))))))))***************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	SRR060679 140x9_testes_total	SRR060683 160_testes_total	M028 head	SRR060665 9_females_carcasses_total	SRR060669 160x9_females_carcasses_total	SRR060670 9_testes_total	SRR060672 9x160_females_carcasses_total	SRR060675 140x9_ovaries_total	SRR060682 9x140_0-2h_embryos_total	SRR060684 140x9_0-2h_embryos_total
.........................................................................................................................................................................................................................ACATAGCTCCGCGCGGAGATA.............	21	0	20	0.15	3	3	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................GACATAACTCCGCGGGGAGATTC....................................................................................	23	1	10	0.10	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................ATATGACGTTCCAAAACGACA...............................	21	0	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0
GACATAACTCCGCGGGGAGATTC....................................................................................................................................................................................................................................	23	1	10	0.10	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................AACTCCCCGCGGAGATATGACG........................................................................................................................................................	22	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1
............................................................................................................................................AAACGACATAACTCCGCGGGGA.........................................................................................	22	0	20	0.05	1	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................GACATAGCTCCGCGCGGAG................	19	0	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
............................................................................TAACTCCCCGCGGAGATATGA..........................................................................................................................................................	21	0	20	0.05	1	0	0	0	0	0	0	0	0	1	0	0
....................................................AAGATATGACGTTCCAAAA....................................................................................................................................................................................	19	0	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................ATGACGTTCCAAAACGACAT..........................................................................................................................................	20	0	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................TCCAAAACGACATAGCTCCGC......................	21	0	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0
................................................................TCCAAAACGACATAACTC.........................................................................................................................................................................	18	0	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................ACATAACTCCCCGCGGAGATATG...............................................	23	0	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................TCCAAAACGACATAACTCC................................................................................................	19	0	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................AACTCCCCGCGGAGATATGACG............................................	22	0	20	0.05	1	0	0	0	0	0	0	0	0	0	1	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12970:8261664-8261914 -	dvi_13596	GACATAACTCCGCGGGGAGAT-----------------------------------------------------------------------------------------------------------------------ACGACGTTCCAAAACGACATAACTCCTCGGTAAGATATGACGTTCCAAAACGACATAACTCC-----CCGCGGAGATATGACGTTCCAAAACGACATAGCTCCG------------------------------------------------------------------------------------CGGGGAGATATGACGTTCC-------------AAAACGACATAACTCCGC-------------------------GGG------------------------------------------------------------------------------------------------------------GAGATACG-------------ACGTTCCAAAA------------------------------------TGACATAACTCCCCGCGGAGATATGACGTTC-C-AAAACGACATAGCTCCGC---------------------------------------GCGGAGATATGACGTTCCAAAA
droWil2	scf2_1100000006560:725-972 +		GACATATCTCCGCGCGAAATT-----------------------------------------------------------------------------------------------------------------------ATGTCGTTTCAGAA-----------------------------------------------------------------------------CGACATATCTCCGCGCGAAATTATTGTTGGGGTTTATTATTATATCATCGCCGGTGATTTGCGCGGAGATATGTCGTTTCAAAACGTCATATCTCCGCCGTTAAA------------------------AAAACGACATATCTCCGCGCG-------------------------------------------------------------------------------------------------------------------------------------AAATTATG-------------TCGTTTCAGAACGACATATCTCCGCCCGAAATTATGTCGTTTCAGAACGACAT--------------------------------------ATCTCCGC---------------------------------------GCGGAGATATGTCGTTTT----
dp5	Unknown_group_95:17567-17798 +	dps_3480	GACATATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCCACAAACGACATATCTCCGCGCGAAATTATGTCGTTTTAAAG-----------------------------------------------------------------------------CGACATACCTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTCTCAAAA----CGTCATAACTCCGCGCGGAGATATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATATG-------------TCGTTTCAAAA------------------------------------CGTCATATCTCCGCGCGGAGATATGTCGTTTGT-GACACG---------------------------------------------------GCGGAGATATGTCGTTCCGAAA
droPer2	scaffold_166:88326-88557 +	dpe_2417	GACATATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCCACAAACGACATATCTCCGCGCGAAATTATGTCGTTTTAAAG-----------------------------------------------------------------------------CGACATACCTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTCTCAAAA----CGTCATAACTCCGCGCGGAGATATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATATG-------------TCGTTTCAAAA------------------------------------CGTCATATCTCCGCGCGGAGATATGTCGTTTGT-GACACG---------------------------------------------------GCGGAGATATGTCGTTTCGAAA
droAna3	scaffold_12905:147194-147266 +		AAAATGACACAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCC------------------------------------------------------------------------------------GCGGGCGATA---------TGACG----------------------------------------TTTTCAAA-----------------------------------------------------------------------------------------------------------------------------------------------AAG------------------------------------TGACGGAATGCCCTCGGAC-----------------------------------------------------------------------------GCTATGACACT------
droBip1	scf7180000395614:342-387 -		AAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATAGCTTTT------------------------------------------------------------------------------------CGGGGAAATT---------CTTCACTCCCAGA----TAGTATAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1	scf7180000298648:310-528 +		GACATAACTCCGCGCAGAGAT------------------------------------------------------------------------------ATG---------------ACGCTTTTTTTTTTGGCGGAGATATGTCGCATGAAAA-----------------------------------------------------------------------------CGACATAACTCCG------------------------------------------------------------------------------------CTCGGAGATA---------TGTCGCAGGAAAA----CGACATAACTCCGCTCGGAGATATGTCGCTTTTTTTCCGGCG------------------------------------------------------------------------------------------------------------GAGCTATG-------------TCGTTTTAAAG------------------------------------CGACATAACTCCGCGCGGAGATATGTCGTTA-T-AAAACGACATAGCTCCGC---------------------------------------CGGAAAAAAAG-----------
droEle1	scf7180000489519:6937-7137 -		GACATAATTTCGCTCGATCTA-----------------------------------------------------------------------------------------------------------------------ATGACGTTTGAGAACGCCATAAGTCCGCCGTAGAA-----------AAAACGACATAATTTCGGTAGCCGCAGAATA--AAC--TGCTAAGCGACATAAGTTCG------------------------------------------------------------------------------------CGCGAAATTA-------------------------------------------------TGTCGTTTTAAAACTATTT------------------------------------------------------------------------------------------------------------G-------TGCCGGACTTATGTCGTTTTAAAG------------------------------------TGACCTAATTTCGCGGGGA---------------AAAACGACATAATTTCAC-------------------------------------------------------------
droRho1	scf7180000778200:8942-9181 +		GACATATCTCCGCGCGGAGAT-----------------------------------------------------------------------------------------------------------------------AAGACGTTGAAAAA-----------------------------------------------------------------------------CGACAGATCTCCG------------------------------------------------------------------------------------CGCGAAATTA---------TTTCGTTTTTAAA----GGTCCTATCTCCGCCCGGAGATGTGTCGTTTGCAGAAGCGCGGAGATATGCCGTTTTGAGACGACATAACTCCCCCGCTGATCAACGCGGAGTTATGTCGTATAAAAACGACATATCTCCGCCCTTCTGC---------------------------------------------------------------------------------------------------------------------------AAACGACATATCTCCGC---------------------------------------GCGGAGATGTGACGTTAAAAAA
droBia1	scf7180000301475:10312-10546 +		A---TAAATCG-------------------------------------------------------------------------------------------------------------------------GCGGAGATGTAACTTTTCATAG-----------------------------------------------------------------------------CGACATAACTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTCTTGAAA----CGTCATATCTCCGCGCGGAAATATGTCGCTTTTTGTTCAGCG------------------------------------------------------------------------------------------------------------GAGATATG-------------TCTTTTTAAAAC-----------------------------------CGACATAACTCCGCGCCGAGATATGACGTTT-TGAAAACGACATAGCTCCGCCAAAAAAAAAACGACAATTCCGCTCGAAAATTGTACCGAGCGGAGATATGTCGTCC-----
droTak1	scf7180000415630:176795-177034 -		GTCATACCTCCGCGCGGAGAT-----------------------------------------------------------------------------------------------------------------------ATGTCGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAGAGCGGAGATATGACGTTTAAAAACGACATATCTCCCCTGTTAATCAACGCGGAGATATGACGTTTAAAAACGACATATCTTCGCCCTTTTAAAAACGACATATCTCCGCGCGGAGATGTG-------------ACGTTTAAAAACGAAATATTTTCGCGCGGAGATATGTCGCTTTTAAACGTCAT--------------------------------------ATCTCCGC---------------------------------------GCGGAGATATGTCGTTCGCAGA
droYak3	v2_chrUn_1329:7165-7402 +		GACATATCTCATC-CGAAATTAAATCGACATACCTCCTAGCGAAGTACCTCCCGAAGTTTTTTGAGTTCGGAGGAGATATGTCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAA----CGATATATCTCCGCTAGGAGGTATGTCGTTTTAATTTCGGAT------------------------------------------------------------------------------------------------------------GAGATATG-------------TCGTTTTGAAACGATC-------------------------------TCAAAAAACTTTGGGAGGAGATATGTCGTTT-TGAAAACGACACAACTCATCCA-------------------GCT------TATTATCG-GCGGAGATGTGTCGTT------
droEre2	scaffold_4690:18024841-18025080 -		GACATATCCTCGG-CGAACTAAACTCGACATATCTCC----------------GTCCTTTTCTTA--TTGGTGGAGTTATGTCGCTTTAAAAACGATATATTTCCGTCAAACTAAAAACGACATATCTCCGCGCGGAACTTTGTTGTTTTACAA-----------------------------------------------------------------------------CGACATTATTCCG------------------------------------------------------------------------------------CGCAGAGATA---------TGACGTTTCATA-----GGACATAACTCCGTGAGGAGATATATCGTTTTTAGATCGACG------------------------------------------------------------------------------------------------------------GAGATATG-------------T---------------------------------------------------------CGC-----------------------------------------------------------------------------GTGGACTTATGTCGTT------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

GACATAACTCCGCGGGGAGAT-----------------------------------------------------------------------------------------------------------------------ACGACGTTCCAAAACGACATAACTCCTCGGTAAGATATGACGTTCCAAAACGACATAACTCC-----CCGCGGAGATATGACGTTCCAAAACGACATAGCTCCG------------------------------------------------------------------------------------CGGGGAGATATGACGTTCC-------------AAAACGACATAACTCCGC-------------------------GGG------------------------------------------------------------------------------------------------------------GAGATACG-------------ACGTTCCAAAA------------------------------------TGACATAACTCCCCGCGGAGATATGACGTTC-C-AAAACGACATAGCTCCGC---------------------------------------GCGGAGATATGACGTTCCAAAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAGCTCCGC---------------------------------------GCGGAGATA.............	21	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGACGTTC-C-AAAACGACA......................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AACTCC-----CCGCGGAGATATGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................AAACGACATAACTCCGC-------------------------GGG------------------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATAGCTCCGC---------------------------------------GCGGAG................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................TAACTCC-----CCGCGGAGATATGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................AAGATATGACGTTCCAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................ATGACGTTCCAAAACGACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-C-AAAACGACATAGCTCCGC---------------------------------------......................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TCCAAAACGACATAACTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAACTCCCCGCGGAGATATG........................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................TCC-------------AAAACGACATAACTCC...............................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTCCCCGCGGAGATATGACG.....................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droWil2

GACATATCTCCGCGCGAAATT-----------------------------------------------------------------------------------------------------------------------ATGTCGTTTCAGAA-----------------------------------------------------------------------------CGACATATCTCCGCGCGAAATTATTGTTGGGGTTTATTATTATATCATCGCCGGTGATTTGCGCGGAGATATGTCGTTTCAAAACGTCATATCTCCGCCGTTAAA------------------------AAAACGACATATCTCCGCGCG-------------------------------------------------------------------------------------------------------------------------------------AAATTATG-------------TCGTTTCAGAACGACATATCTCCGCCCGAAATTATGTCGTTTCAGAACGACAT--------------------------------------ATCTCCGC---------------------------------------GCGGAGATATGTCGTTTT----	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..................................................................................................................................................................................................................................................................................................TGCGCGGAGATATGTCGTTTCAAAACG..........................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.70	14	0	10	0	4	0
..................................................................................................................................................................................................................................................................................................TGCGCGGAGATATGTCGTTTCAAAA............................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.25	5	0	4	0	1	0
............................................................................................................................................................................................................................................................................................................................................TAAA------------------------AAAACGACATATCTCCGCGCG-------------------------------------------------------------------------------------------------------------------------------------AA...................................................................................................................................................................................	27	5	0.20	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................GATTTGCGCGGAGATATGTCGTTTA................................................................................................................................................................................................................................................................................................................................................................................................	25	7	0.14	1	0	1	0	0	0
....................................................................................................................................................................................................................................................CGCGAAATTATTGTTGGGGTTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................TTTATTATTATATCATCGCCGGTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................	27	7	0.14	1	0	0	0	1	0
..................................................................................................................................................................................................................................................CGCGCGAAATTATTGTTGGGGTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	7	0.14	1	0	0	0	1	0
....................................................................................................................................................TCAGAA-----------------------------------------------------------------------------CGACATATCTCCGCGCGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	13	0.08	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................GCGCGGAGATATGTCGTTTCAAAACG..........................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................AAACGACATATCTCCGCGC...........................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGC---------------------------------------GCGGAGATATGTCGTTTT----	22	20	0.05	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................TGCGCGGAGATATGTCGTTTCAAAAC...........................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0
.......................................................................................................................................................GAA-----------------------------------------------------------------------------CGACATATCTCCGCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................CGCGCG-------------------------------------------------------------------------------------------------------------------------------------AAATTATG-------------TCGTTTCAGAACG...................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGACAT--------------------------------------ATCTCCGC---------------------------------------GCG...................	20	20	0.05	1	0	0	0	0	1
..........CGCGCGAAATT-----------------------------------------------------------------------------------------------------------------------ATGTCGTTTCAGAA-----------------------------------------------------------------------------CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................GCGCG-------------------------------------------------------------------------------------------------------------------------------------AAATTATG-------------TCGTTTCAGAACGAC.................................................................................................................................................	28	20	0.05	1	0	1	0	0	0
...........GCGCGAAATT-----------------------------------------------------------------------------------------------------------------------ATGTCGTTTCAGAA-----------------------------------------------------------------------------CGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGC---------------------------------------GCGGAGATATGTCGTTT.....	21	20	0.05	1	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACAT--------------------------------------ATCTCCGC---------------------------------------GCGGAGT...............	23	20	0.05	1	0	0	0	0	1
...................................................................................................................................................................................................................................................................................................................TTTCAAAACGTCATATCTC.................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	1	0

dp5

GACATATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCCACAAACGACATATCTCCGCGCGAAATTATGTCGTTTTAAAG-----------------------------------------------------------------------------CGACATACCTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTCTCAAAA----CGTCATAACTCCGCGCGGAGATATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATATG-------------TCGTTTCAAAA------------------------------------CGTCATATCTCCGCGCGGAGATATGTCGTTTGT-GACACG---------------------------------------------------GCGGAGATATGTCGTTCCGAAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................................................................	21	3	767.00	2301	0	232	0	0	0	0	2	1863	203	1
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................................................................	22	3	661.00	1983	0	69	0	0	0	0	0	1856	58	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................................................................	21	3	534.00	1602	0	27	0	0	0	0	0	1503	71	1
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................................................................	21	3	509.67	1529	0	110	0	0	0	0	0	1403	16	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................................................................	22	3	487.33	1462	0	210	0	0	0	0	0	1235	17	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................................................................	20	3	439.00	1317	0	156	0	0	0	0	0	1113	48	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................................................................	23	3	393.33	1180	0	44	0	0	0	0	0	1100	36	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................................................................	21	3	144.33	433	0	104	0	0	0	0	4	318	7	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................................................................	20	3	98.00	294	0	21	0	0	0	0	0	222	50	1
.....................................................................................................................................................................................................................................................................................................................................................................AAA----CGTCATAACTCCGCGCGG.........................................................................................................................................................................................................................................................................................................................	21	2	97.00	194	0	136	0	0	0	0	0	58	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGA.................................................................................................................................................................................	20	3	61.33	184	0	47	0	0	0	1	0	134	2	0
............................................................................................................GATCCACAAACGACATATCTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	60.00	180	0	156	0	0	0	0	0	22	2	0
..........................................................................................................................................................................................................................................................................................................................................................................................GCGGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................................................................	21	5	56.00	280	0	21	0	0	0	0	0	239	20	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................................................................	20	6	52.00	312	0	18	0	0	0	0	0	260	34	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGA.................................................................................................................................................................................	21	3	51.00	153	0	39	0	0	0	0	0	114	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................................................................	19	3	46.33	139	0	24	0	0	0	0	0	92	23	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAG..................................................................................................................................................................................	19	3	45.33	136	0	26	0	0	0	0	0	104	6	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACGGT..................................................................................................................................................................................................................................................................................................	23	3	36.67	110	0	4	0	0	0	0	0	94	12	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAG..................................................................................................................................................................................	20	3	31.00	93	0	21	0	0	0	0	0	68	4	0
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................................................................	20	3	30.00	90	0	21	0	0	0	0	0	69	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................................................................	20	3	28.00	84	0	20	0	0	0	0	0	59	5	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGA.................................................................................................................................................................................	19	3	27.33	82	0	22	0	0	0	0	0	59	1	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAAA.....................................................................................................................................................................................................................................................................................................	22	3	26.67	80	0	1	0	0	0	0	0	78	1	0
....................................................................................................................................................................................................................................................................................................................................................................AAAA----CGTCATAACTCCGCGCG..........................................................................................................................................................................................................................................................................................................................	21	2	25.50	51	0	37	0	0	0	0	1	13	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATA...............................................................................................................................................................................	22	3	20.67	62	0	8	0	0	0	0	0	54	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................................................................	22	3	20.00	60	0	1	0	0	0	0	0	56	3	0
......................................................................................................................................................................................................................................................................................................................................................................AA----CGTCATAACTCCGCGCGGA........................................................................................................................................................................................................................................................................................................................	21	2	18.50	37	0	18	0	0	0	0	0	19	0	0
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................................................................	21	3	17.67	53	0	11	0	0	0	0	0	42	0	0
..................................................................................................TATCTCCGCCGATCCACAAACGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	17.67	53	0	52	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................ACTCCGCGCGGAGATATGTCG...............................................................................................................................................................................................................................................................................................................	21	2	16.50	33	0	15	0	0	0	0	0	18	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................	19	3	16.33	49	0	12	0	0	0	0	0	31	6	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAT................................................................................................................................................................................	21	3	16.33	49	0	27	0	0	0	0	1	21	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................CGGAGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................................................................	21	6	15.67	94	0	4	0	0	0	0	0	79	11	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGGT..................................................................................................................................................................................................................................................................................................	24	3	15.33	46	0	1	0	0	0	0	0	43	2	0
............................................................................................................GATCCACAAACGACATATCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	13.00	39	0	34	0	1	0	0	1	3	0	0
.................................................................................................................................................................................................................................................................................................................................................................................TAACTCCGCGCGGAGATATG..................................................................................................................................................................................................................................................................................................................	20	2	11.00	22	0	21	1	0	0	0	0	0	0	0
....................................................................................................TCTCCGCCGATCCACAAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	11.00	33	0	30	0	0	0	0	0	3	0	0
...............................................................................................................................................TCGTTTTAAAG-----------------------------------------------------------------------------CGACATACCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	10.67	32	0	31	0	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................AA----CGTCATAACTCCGCGCGG.........................................................................................................................................................................................................................................................................................................................	20	2	10.50	21	0	17	0	0	0	0	0	4	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAT................................................................................................................................................................................	20	3	10.00	30	0	16	0	0	0	0	0	13	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................	18	3	9.67	29	0	18	0	0	0	1	0	10	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................................................................	19	3	9.67	29	0	10	0	0	0	1	0	18	0	0
.............................................................................................................ATCCACAAACGACATATCTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	9.00	27	0	25	0	0	0	0	0	2	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................................................................	22	5	8.20	41	0	6	0	0	0	0	0	35	0	0
..................................................................................................................CAAACGACATATCTCCGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	18	7.89	142	0	124	0	0	0	0	4	13	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGT.................................................................................................................................................................................	20	3	7.33	22	0	14	0	0	0	1	1	4	2	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAG......................................................................................................................................................................................................................................................................................................	21	6	7.33	44	0	2	0	0	0	0	0	41	1	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	4	7.25	29	0	28	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACGGTT------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	24	3	7.00	21	0	0	0	0	0	0	0	20	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................................................................	19	6	6.83	41	0	8	0	0	0	0	0	28	5	0
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................................................................	19	3	6.33	19	0	7	0	0	0	0	0	12	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................................................................	20	3	6.00	18	0	13	0	0	0	0	0	5	0	0
......................................................................................................TCCGCCGATCCACAAACGACATATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	5.67	17	0	13	3	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATA...............................................................................................................................................................................	21	3	5.67	17	0	8	0	0	0	0	0	9	0	0
..................................................................................................TATCTCCGCCGATCCACAAACGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	5.67	17	0	14	3	0	0	0	0	0	0	0
..........................................................................................................................ATATCTCCGCGCGAAATTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	5.67	17	0	10	0	0	0	0	0	7	0	0
...............................................................................................................................................................................................................................................................................................................................................ATA---------TGTCGTCTCAAAA----CGTCA......................................................................................................................................................................................................................................................................................................................................	21	2	5.50	11	0	5	0	0	0	0	0	6	0	0
....................................................................................................................................................................................................................................................................................................................................................................AAAA----CGTCATAACTCCGCGCC..........................................................................................................................................................................................................................................................................................................................	21	2	5.50	11	0	4	0	0	0	0	0	7	0	0
.......................................................................................................................................................................................................................................................................................................................................................................A----CGTCATAACTCCGCGCGGA........................................................................................................................................................................................................................................................................................................................	20	2	5.50	11	0	11	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACT....................................................................................................................................................................................................................................................................................................	22	3	5.33	16	0	0	0	0	0	0	0	14	2	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAG..................................................................................................................................................................................	18	3	5.33	16	0	6	0	0	0	0	0	8	2	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATT...............................................................................................................................................................................	22	3	5.00	15	0	5	0	0	0	0	0	10	0	0
.....................................................................................................................................................TAAAG-----------------------------------------------------------------------------CGACATACCTCCG------------------------------------------------------------------------------------CGCGGAGA.......................................................................................................................................................................................................................................................................................................................................................................	26	4	4.75	19	0	10	2	0	6	0	1	0	0	0
....................................................................................................TCTCCGCCGATCCACAAACGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	4.67	14	0	12	0	0	0	0	0	2	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAC................................................................................................................................................................................	21	3	4.67	14	0	0	0	0	0	0	0	14	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................CGGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................................................................	20	6	4.67	28	0	5	0	0	0	0	0	15	8	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................................................................	19	6	4.50	27	0	3	0	0	0	0	0	11	13	0
.............................................................................................................................................................................................................................................................................................................................................AGATA---------TGTCGTCTCAAAA----CGTC.......................................................................................................................................................................................................................................................................................................................................	22	2	4.50	9	0	6	0	0	0	0	1	2	0	0
............................................................................................................................................................................................................................................TACCTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTC.....................................................................................................................................................................................................................................................................................................................................................	25	2	4.50	9	0	7	2	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACC....................................................................................................................................................................................................................................................................................................	22	3	4.33	13	0	1	0	0	0	0	0	11	1	0
..............................................................................................................TCCACAAACGACATATCTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	6	4.33	26	0	22	0	0	0	0	0	4	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................................................................	18	6	4.33	26	0	7	0	0	0	0	0	17	2	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACGGT..................................................................................................................................................................................................................................................................................................	22	3	4.33	13	0	0	0	0	0	0	0	11	2	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATT...............................................................................................................................................................................	21	3	4.33	13	0	10	0	0	0	0	0	2	1	0
..................................................................................................TATCTCCGCCGATCCACAAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	4.00	12	0	12	0	0	0	0	0	0	0	0
...............................................................................................................................TCCGCGCGAAATTATGTCGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	4.00	12	0	8	0	0	0	1	1	2	0	0
.......................................................................................................................................................................................................................................................................................................................................................................A----CGTCATAACTCCGCGCGGAG.......................................................................................................................................................................................................................................................................................................................	21	2	4.00	8	0	4	0	0	0	0	0	4	0	0
............................................................................................................GATCCACAAACGACATATCTCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	4.00	12	0	8	0	0	0	0	0	4	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................................................................	24	3	4.00	12	0	1	0	0	0	0	0	10	1	0
..............................................................................................................TCCACAAACGACATATCTCCGCGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	4.00	8	0	8	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................CAAAA----CGTCATAACTCCGCGC...........................................................................................................................................................................................................................................................................................................................	21	2	4.00	8	0	2	0	0	0	0	0	5	1	0
...................................................................................................................AAACGACATATCTCCGCGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	4	3.75	15	0	14	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................................................................	19	3	3.67	11	0	3	0	0	0	0	0	8	0	0
.............................................................................................................ATCCACAAACGACATATCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	3.67	11	0	11	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACA....................................................................................................................................................................................................................................................................................................	22	3	3.67	11	0	0	0	0	0	0	0	11	0	0
.....................................................................................................................................................................................................................................................................................................................................................................AAA----CGTCATAACTCCGCGCGGT........................................................................................................................................................................................................................................................................................................................	22	2	3.50	7	0	4	0	0	0	0	0	3	0	0
.................................................................................................................................................................................................................................................................................................................................................................................TAACTCCGCGCGGAGATATGT.................................................................................................................................................................................................................................................................................................................	21	2	3.50	7	0	3	0	0	0	0	0	4	0	0
...............................................................................................................................................................................................................................................................................................................................................ATA---------TGTCGTCTCAAAA----CGTCAT.....................................................................................................................................................................................................................................................................................................................................	22	2	3.50	7	0	3	0	0	0	0	0	4	0	0
......................................................................................................................................................................................................................................................................................................................................................................AA----CGTCATAACTCCGCGCGGTT.......................................................................................................................................................................................................................................................................................................................	22	2	3.50	7	0	5	0	0	0	0	0	2	0	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	4	3.50	14	0	14	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................AAA----CGTCATAACTCCGCGCGC.........................................................................................................................................................................................................................................................................................................................	21	2	3.50	7	0	4	0	0	0	0	0	3	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------T....................................................................................................................................................................................	22	3	3.33	10	0	0	0	0	0	0	0	10	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACT....................................................................................................................................................................................................................................................................................................	21	3	3.33	10	0	2	0	0	0	0	0	7	1	0
...........................................................................................................................TATCTCCGCGCGAAATTATGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	3.33	10	0	7	0	0	0	0	0	3	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................................................................	18	6	3.33	20	0	3	0	0	0	0	0	17	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	4	3.25	13	0	13	0	0	0	0	0	0	0	0
......TCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	4	3.25	13	0	13	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................AAA----CGTCATAACTCCGCGCGT.........................................................................................................................................................................................................................................................................................................................	21	2	3.00	6	0	6	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................AGATA---------TGTCGTCTCAAAA----CGT........................................................................................................................................................................................................................................................................................................................................	21	2	3.00	6	0	5	0	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACGTT..................................................................................................................................................................................................................................................................................................	23	3	3.00	9	0	0	0	0	0	0	0	9	0	0
.....................................................................................................................................................................................................................................................................................................................................................................AAA----CGTCATAACTCCGCGCG..........................................................................................................................................................................................................................................................................................................................	20	2	3.00	6	0	6	0	0	0	0	0	0	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	4	2.75	11	0	11	0	0	0	0	0	0	0	0
.................................................................................................................ACAAACGACATATCTCCGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	19	2.68	51	0	35	0	0	0	0	0	16	0	0
.............................................................................................................................TCTCCGCGCGAAATTATGTCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	2.67	8	0	5	0	0	0	0	0	3	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------G....................................................................................................................................................................................	21	3	2.67	8	0	5	0	0	0	0	0	3	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAAT.....................................................................................................................................................................................................................................................................................................	22	3	2.67	8	0	0	0	0	0	0	0	8	0	0
...............................................................................................................CCACAAACGACATATCTCCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	2.60	13	0	10	0	0	0	0	0	3	0	0
....................................................................................................................................................................................................................................................................................................................................................................AAAA----CGTCATAACTCCGCGCT..........................................................................................................................................................................................................................................................................................................................	21	2	2.50	5	0	3	0	0	0	0	0	2	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	4	2.50	10	0	8	0	0	0	0	0	2	0	0
.................................................................................................................................................................................................................................................................................................................................................................................TAACTCCGCGCGGAGATATGTC................................................................................................................................................................................................................................................................................................................	22	2	2.50	5	0	4	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................ACTCCGCGCGGAGATATGTCGT..............................................................................................................................................................................................................................................................................................................	22	2	2.50	5	0	5	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................CGTCATAACTCCGCGCGGAG.......................................................................................................................................................................................................................................................................................................................	20	2	2.50	5	0	5	0	0	0	0	0	0	0	0
...............................................................................................................................TCCGCGCGAAATTATGTCGTTTTAAAG-----------------------------------------------------------------------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	2	2.50	5	0	5	0	0	0	0	0	0	0	0
...........................................................................................................................TATCTCCGCGCGAAATTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	2.33	7	0	7	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------G....................................................................................................................................................................................	20	3	2.33	7	0	7	0	0	0	0	0	0	0	0
.....................................................................................................CTCCGCCGATCCACAAACGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	2.33	7	0	7	0	0	0	0	0	0	0	0
......................................................................................................TCCGCCGATCCACAAACGACATATCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	2.33	7	0	7	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................................................................	20	3	2.33	7	0	0	0	0	0	0	0	7	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAAA.....................................................................................................................................................................................................................................................................................................	21	3	2.33	7	0	0	0	0	0	0	0	5	2	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	4	2.25	9	0	9	0	0	0	0	0	0	0	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	10	2.00	20	0	19	0	0	0	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAA------------------------------------CGTCATATCTCCGCGCGG...............................................................................................	24	4	2.00	8	0	8	0	0	0	0	0	0	0	0
..........................................................................................................................................TTATGTCGTTTTAAAG-----------------------------------------------------------------------------CGACATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................A----CGTCATAACTCCGCGCGG.........................................................................................................................................................................................................................................................................................................................	19	2	2.00	4	0	4	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GT...................................................................................................................................................................................	18	3	2.00	6	0	5	0	0	0	0	0	1	0	0
...............................................................................................................................................TCGTTTTAAAG-----------------------------------------------------------------------------CGACATACCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	2.00	6	0	2	0	0	0	0	0	4	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAT................................................................................................................................................................................	22	3	2.00	6	0	3	0	0	0	0	0	3	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGGA..................................................................................................................................................................................................................................................................................................	24	3	2.00	6	0	0	0	0	0	0	0	6	0	0
.........CCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	4	2.00	8	0	8	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................CGTCATAACTCCGCGCGGAGA......................................................................................................................................................................................................................................................................................................................	21	2	2.00	4	0	4	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................GACATACCTCCG------------------------------------------------------------------------------------CGCGGAGAT......................................................................................................................................................................................................................................................................................................................................................................	21	4	2.00	8	0	2	0	1	5	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................CCGCGCGGAGATATGTCGTTT............................................................................................................................................................................................................................................................................................................	21	14	2.00	28	0	26	0	0	0	0	2	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGCGGAGATATGTCGTTT..................................................................................	21	14	2.00	28	0	26	0	0	0	0	2	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GATA---------TGTCGTCTCAAAA----CGTC.......................................................................................................................................................................................................................................................................................................................................	21	2	2.00	4	0	4	0	0	0	0	0	0	0	0
................................................................................................................CACAAACGACATATCTCCGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	13	2.00	26	0	21	0	0	0	0	1	4	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATA...............................................................................................................................................................................	20	3	2.00	6	0	5	0	0	0	0	0	1	0	0
......TCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	4	2.00	8	0	8	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACA....................................................................................................................................................................................................................................................................................................	21	3	2.00	6	0	0	0	0	0	0	0	6	0	0
......................................................................................................................................................................................................................................................................................................................................................................AA----CGTCATAACTCCGCGCGGT........................................................................................................................................................................................................................................................................................................................	21	2	2.00	4	0	3	0	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATAAA-------------A...............................................................................................................................................................	25	3	2.00	6	0	0	0	0	0	0	0	6	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAC......................................................................................................................................................................................................................................................................................................	21	6	1.83	11	0	0	0	0	0	0	0	11	0	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	10	1.80	18	0	17	1	0	0	0	0	0	0	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	4	1.75	7	0	7	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGT.................................................................................................................................................................................	19	3	1.67	5	0	5	0	0	0	0	0	0	0	0
.........................................................................................................................CATATCTCCGCGCGAAATTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	1.67	5	0	2	0	0	0	0	0	3	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGGTT------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	25	3	1.67	5	0	0	0	0	0	0	0	5	0	0
...............................................................................................................................TCCGCGCGAAATTATGTCGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	1.67	5	0	5	0	0	0	0	0	0	0	0
............................................................................................................GATCCACAAACGACATATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	1.67	5	0	5	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................	17	3	1.67	5	0	0	0	0	0	0	0	5	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................................................................	18	3	1.67	5	0	2	0	0	0	0	0	2	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACGGTT------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	23	3	1.67	5	0	1	0	0	0	0	0	4	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAG..................................................................................................................................................................................	28	3	1.67	5	0	0	0	0	0	0	0	5	0	0
...................................................................................................................................................................................................................................................................................................................................................................................ACTCCGCGCGGAGATATGTC................................................................................................................................................................................................................................................................................................................	20	2	1.50	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................CGTCATAACTCCGCGCGGA........................................................................................................................................................................................................................................................................................................................	19	2	1.50	3	0	3	0	0	0	0	0	0	0	0
................................................................................................................CACAAACGACATATCTCCGCGCGAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	2	1.50	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................TACCTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTCT....................................................................................................................................................................................................................................................................................................................................................	26	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.......CTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	10	1.50	15	0	12	0	0	0	0	0	3	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATAA..............................................................................................................................................................................	23	3	1.33	4	0	0	0	0	0	0	0	4	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGCTC------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	25	3	1.33	4	0	0	0	0	0	0	0	4	0	0
....................................................................................................TCTCCGCCGATCCACAAACGACATATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	1.33	4	0	4	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAC................................................................................................................................................................................	22	3	1.33	4	0	0	0	0	0	0	0	4	0	0
...................................................................................................ATCTCCGCCGATCCACAAACGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	1.33	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................................................................	23	3	1.33	4	0	0	0	0	0	0	0	4	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------G....................................................................................................................................................................................	18	3	1.33	4	0	3	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAT................................................................................................................................................................................	19	3	1.33	4	0	2	0	0	0	0	0	2	0	0
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................................................................	18	3	1.33	4	0	3	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................................................................	17	6	1.33	8	0	0	0	0	0	0	0	8	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAG..................................................................................................................................................................................	21	3	1.33	4	0	2	0	0	0	0	0	2	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACGGA..................................................................................................................................................................................................................................................................................................	23	3	1.33	4	0	1	0	0	0	0	0	3	0	0
.......................................................................................................CCGCCGATCCACAAACGACATATCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	1.33	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACGC...................................................................................................................................................................................................................................................................................................	23	3	1.33	4	0	0	0	0	0	0	0	4	0	0
....................................................................................................TCTCCGCCGATCCACAAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	1.33	4	0	4	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAAA.....................................................................................................................................................................................................................................................................................................	20	3	1.33	4	0	1	0	0	0	0	0	2	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAA................................................................................................................................................................................	21	3	1.33	4	0	3	0	0	0	0	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................................................................	22	3	1.33	4	0	1	0	0	0	0	0	2	0	1
......TCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	10	1.30	13	0	10	1	0	0	0	0	2	0	0
..............................................................................................................TCCACAAACGACATATCTCCGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	4	1.25	5	0	5	0	0	0	0	0	0	0	0
..............................................................................................................TCCACAAACGACATATCTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	6	1.17	7	0	7	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAG......................................................................................................................................................................................................................................................................................................	19	6	1.17	7	0	0	0	0	0	0	0	7	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGTTTGT-G..............................................................................	21	13	1.08	14	0	4	0	0	0	0	1	9	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGTTTGTG.........................................................................................................................................................................................................................................................................................................	21	13	1.08	14	0	4	0	0	0	0	1	9	0	0
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAACGTT..................................................................................................................................................................................................................................................................................................	21	3	1.00	3	0	0	0	0	0	0	0	1	2	0
...........................................................................................................................TATCTCCGCGCGAAATTATGTCGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAA................................................................................................................................................................................	20	3	1.00	3	0	3	0	0	0	0	0	0	0	0
................................................................................................................................................CGTTTTAAAG-----------------------------------------------------------------------------CGACATACCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	1.00	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACGGTA------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	24	3	1.00	3	0	0	0	0	0	0	0	3	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGA.................................................................................................................................................................................	18	3	1.00	3	0	3	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................ATA---------TGTCGTCTCAAAA----CGT........................................................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	0	0	0	0	0	0	2	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAACTC...................................................................................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	3	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAA------------------------------------CGTCATATCTCCGCG..................................................................................................	22	4	1.00	4	0	4	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................AA----CGTCATAACTCCGCGCGGTTT......................................................................................................................................................................................................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................TCCGCCGATCCACAAACGACATATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	1.00	3	0	1	2	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGCGGAGATATGTCGTT...................................................................................	21	14	1.00	14	0	12	0	0	0	0	1	1	0	0
......TCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	4	1.00	4	0	3	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	0	3	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAACA....................................................................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	2	1	0
.............................................................................................................................................................................................................................................................................................................................................AGATA---------TGTCGTCTCAAAA----CGTT.......................................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGG.................................................................................................................................................................................	20	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.....ATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	4	1.00	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................AACTCCGCGCGGAGATATG..................................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGTTTGTGGAACGGC..................................................................................................................................................................................................................................................................................................	28	3	1.00	3	0	0	0	0	0	0	0	1	2	0
......................................................................................................................................................................................................................................................................................................................................................................AA----CGTCATAACTCCGCGCGGTA.......................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	4	1.00	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................	21	3	1.00	3	0	1	0	0	0	0	0	2	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................TCCGCGCGGAGATATGTCGTT.............................................................................................................................................................................................................................................................................................................	21	14	1.00	14	0	12	0	0	0	0	1	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACTA...................................................................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.............................................................................................................................................................................................................................................................................................................................................................................GTCATAACTCCGCGCGGAG.......................................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................CGCGGAGATA---------TGTCGTCTCAAAA----CG.........................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................................................................	21	3	1.00	3	0	0	0	0	0	0	0	1	2	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GT...................................................................................................................................................................................	19	3	1.00	3	0	0	0	0	0	0	0	3	0	0
....................................................................................................................................................................................................................................................................................................................................................................AAAA----CGTCATAACTCCGCGC...........................................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	1	0	0	0	0	0	1	0	0
...........................................................................................................................TATCTCCGCGCGAAATTATGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	1.00	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................TCCACAAACGACATATCTCCGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	5	1.00	5	0	4	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................CGGAGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	3	0	0
........................................................................................................................................................................................................................................GACATACCTCCG------------------------------------------------------------------------------------CGCGGAGATA---------............................................................................................................................................................................................................................................................................................................................................................	22	4	1.00	4	0	1	1	0	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................AA----CGTCATAACTCCGCGCG..........................................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAAG.....................................................................................................................................................................................................................................................................................................	22	3	1.00	3	0	0	0	0	0	0	0	3	0	0
.............................................................................................................ATCCACAAACGACATATCTCCGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	1	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATATG-------------TAA.............................................................................................................................................................	24	3	1.00	3	0	0	0	0	0	0	0	3	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATAT..............................................................................................................................................................................	21	3	1.00	3	0	2	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................A----CGTCATAACTCCGCGCG..........................................................................................................................................................................................................................................................................................................................	18	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................ATCCACAAACGACATATCTCCGCGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................AACGACATATCTCCGCGCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	4	1.00	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................AACTCCGCGCGGAGATATGTC................................................................................................................................................................................................................................................................................................................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTC.....................................................................................................................................................................................................................................................................................................................................................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................TAACTCCGCGCGGAGATATGTCGTT.............................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................TCTCCGCCGATCCACAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	3	1.00	3	0	2	0	0	0	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................CAAAA----CGTCATAACTCCGCGCG..........................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	26	3	1.00	3	0	0	0	0	0	0	0	0	3	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGT.................................................................................................................................................................................	21	3	1.00	3	0	1	0	0	0	0	0	1	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACTC...................................................................................................................................................................................................................................................................................................	23	3	1.00	3	0	0	0	0	0	0	0	3	0	0
...........................................................................................................................................................................................................................................................................................................................................................TGTCGTCTCAAAA----CGTCATAACT.................................................................................................................................................................................................................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................AAA----CGTCATAACTCCGCGCC..........................................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0

droPer2

GACATATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCCACAAACGACATATCTCCGCGCGAAATTATGTCGTTTTAAAG-----------------------------------------------------------------------------CGACATACCTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTCTCAAAA----CGTCATAACTCCGCGCGGAGATATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATATG-------------TCGTTTCAAAA------------------------------------CGTCATATCTCCGCGCGGAGATATGTCGTTTGT-GACACG---------------------------------------------------GCGGAGATATGTCGTTTCGAAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................................................................	21	2	2.00	4	0	0	0	0	0	4
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGA.......................................................................................................................................................................................................................................................................................................	19	5	1.60	8	0	0	0	0	0	8
..............................................................................................................................................................................................................................................................................................................................................................................................AGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	0	0	0	0	2
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	0	0	0	0	2
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAACG....................................................................................................................................................................................................................................................................................................	19	2	1.00	2	0	0	0	0	0	2
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAA......................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	0	0	0	0	2
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................................................................	21	2	1.00	2	0	0	0	0	0	2
................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGTTTGTGGAACGG...................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	0	0	0	0	2
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.67	2	0	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGAC................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAA------------------------------------CGTCATATCTCCGCGCGGA..............................................................................................	25	2	0.50	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GAGATAT..............................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAACGT...................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	1
...................................................................................................................................................................................................................................................................................................................................................................................................TGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------GA...................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................................................................................GATATGTCGTTTGTGGAAC.....................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTTGTGGAACGGCG------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGCGGAGATATGTCGTTTGT-GA.............................................................................	26	4	0.50	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGTTTGTGG........................................................................................................................................................................................................................................................................................................	18	5	0.40	2	0	0	0	0	0	2
......TCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	1	0	0	0	0
..................................................................................................TATCTCCGCCGATCCACAAACGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0
......TCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	3	0.33	1	0	1	0	0	0	0
.........CCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGATCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0
......................................................................................................TCCGCCGATCCACAAACGACATATCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	1	0	0	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0
.....................................................................................................CTCCGCCGATCCACAAACGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	0.33	1	1	0	0	0	0	0
..CATATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	1	0	0	0	0
..................................................................................................TATCTCCGCCGATCCACAAACGACATATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	3	0.33	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGCGGAGATATGTCGTTTGT-GACA...........................................................................	28	4	0.25	1	0	1	0	0	0	0
........TCCG--------------------------------------------------------------------------------ACGACATATCTCCGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	5	0.20	1	0	1	0	0	0	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	0.20	1	0	1	0	0	0	0
....TATCTCCG--------------------------------------------------------------------------------ACGACATATCTCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGCGGAGATATGTCGTTTG.................................................................................	22	7	0.14	1	0	0	0	0	0	1
......................................................................................................................................................................................................................................................................................................................................................................................CCGCGCGGAGATATGTCGTTTG...........................................................................................................................................................................................................................................................................................................	22	7	0.14	1	0	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGTTTGTG.........................................................................................................................................................................................................................................................................................................	21	8	0.13	1	0	0	0	0	0	1
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGTTTGT-G..............................................................................	21	8	0.13	1	0	0	0	0	0	1
..................................................................................................................CAAACGACATATCTCCGCGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	11	0.09	1	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................GCGGAGATATGTCGTTTGT..........................................................................................................................................................................................................................................................................................................	19	12	0.08	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGATATGTCGTTTGT-...............................................................................	19	12	0.08	1	0	0	0	0	0	1

droAna3

AAAATGACACAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCC------------------------------------------------------------------------------------GCGGGCGATA---------TGACG----------------------------------------TTTTCAAA-----------------------------------------------------------------------------------------------------------------------------------------------AAG------------------------------------TGACGGAATGCCCTCGGAC-----------------------------------------------------------------------------GCTATGACACT------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

AAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACATAGCTTTT------------------------------------------------------------------------------------CGGGGAAATT---------CTTCACTCCCAGA----TAGTATAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GACATAACTCCGCGCAGAGAT------------------------------------------------------------------------------ATG---------------ACGCTTTTTTTTTTGGCGGAGATATGTCGCATGAAAA-----------------------------------------------------------------------------CGACATAACTCCG------------------------------------------------------------------------------------CTCGGAGATA---------TGTCGCAGGAAAA----CGACATAACTCCGCTCGGAGATATGTCGCTTTTTTTCCGGCG------------------------------------------------------------------------------------------------------------GAGCTATG-------------TCGTTTTAAAG------------------------------------CGACATAACTCCGCGCGGAGATATGTCGTTA-T-AAAACGACATAGCTCCGC---------------------------------------CGGAAAAAAAG-----------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GACATAATTTCGCTCGATCTA-----------------------------------------------------------------------------------------------------------------------ATGACGTTTGAGAACGCCATAAGTCCGCCGTAGAA-----------AAAACGACATAATTTCGGTAGCCGCAGAATA--AAC--TGCTAAGCGACATAAGTTCG------------------------------------------------------------------------------------CGCGAAATTA-------------------------------------------------TGTCGTTTTAAAACTATTT------------------------------------------------------------------------------------------------------------G-------TGCCGGACTTATGTCGTTTTAAAG------------------------------------TGACCTAATTTCGCGGGGA---------------AAAACGACATAATTTCAC-------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GACATATCTCCGCGCGGAGAT-----------------------------------------------------------------------------------------------------------------------AAGACGTTGAAAAA-----------------------------------------------------------------------------CGACAGATCTCCG------------------------------------------------------------------------------------CGCGAAATTA---------TTTCGTTTTTAAA----GGTCCTATCTCCGCCCGGAGATGTGTCGTTTGCAGAAGCGCGGAGATATGCCGTTTTGAGACGACATAACTCCCCCGCTGATCAACGCGGAGTTATGTCGTATAAAAACGACATATCTCCGCCCTTCTGC---------------------------------------------------------------------------------------------------------------------------AAACGACATATCTCCGC---------------------------------------GCGGAGATGTGACGTTAAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

A---TAAATCG-------------------------------------------------------------------------------------------------------------------------GCGGAGATGTAACTTTTCATAG-----------------------------------------------------------------------------CGACATAACTCCG------------------------------------------------------------------------------------CGCGGAGATA---------TGTCGTCTTGAAA----CGTCATATCTCCGCGCGGAAATATGTCGCTTTTTGTTCAGCG------------------------------------------------------------------------------------------------------------GAGATATG-------------TCTTTTTAAAAC-----------------------------------CGACATAACTCCGCGCCGAGATATGACGTTT-TGAAAACGACATAGCTCCGCCAAAAAAAAAACGACAATTCCGCTCGAAAATTGTACCGAGCGGAGATATGTCGTCC-----	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GTCATACCTCCGCGCGGAGAT-----------------------------------------------------------------------------------------------------------------------ATGTCGTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAGAGCGGAGATATGACGTTTAAAAACGACATATCTCCCCTGTTAATCAACGCGGAGATATGACGTTTAAAAACGACATATCTTCGCCCTTTTAAAAACGACATATCTCCGCGCGGAGATGTG-------------ACGTTTAAAAACGAAATATTTTCGCGCGGAGATATGTCGCTTTTAAACGTCAT--------------------------------------ATCTCCGC---------------------------------------GCGGAGATATGTCGTTCGCAGA	Size	Hit Count	Total Norm	Total
No Reads

droYak3

GACATATCTCATC-CGAAATTAAATCGACATACCTCCTAGCGAAGTACCTCCCGAAGTTTTTTGAGTTCGGAGGAGATATGTCGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAA----CGATATATCTCCGCTAGGAGGTATGTCGTTTTAATTTCGGAT------------------------------------------------------------------------------------------------------------GAGATATG-------------TCGTTTTGAAACGATC-------------------------------TCAAAAAACTTTGGGAGGAGATATGTCGTTT-TGAAAACGACACAACTCATCCA-------------------GCT------TATTATCG-GCGGAGATGTGTCGTT------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGTTTTAATTTCGGAT------------------------------------------------------------------------------------------------------------GAGA.................................................................................................................................................................................	25	3	3.33	10	0	0	0	0	0	0	0	0	0	0	10
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATCG-GCGGAGATGTGTC.........	21	4	0.50	2	0	1	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................GAGGTATGTCGTTTTAATTTCGGAT------------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------GCT------TATTATCG-GCGGAGATGTG...........	24	3	0.33	1	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCATCCA-------------------GCT------TATTATCG-GCGGAGA...............	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATCG-GCGGAGATGTGTCG........	22	4	0.25	1	0	0	0	0	0	0	1	0	0	0	0

droEre2

GACATATCCTCGG-CGAACTAAACTCGACATATCTCC----------------GTCCTTTTCTTA--TTGGTGGAGTTATGTCGCTTTAAAAACGATATATTTCCGTCAAACTAAAAACGACATATCTCCGCGCGGAACTTTGTTGTTTTACAA-----------------------------------------------------------------------------CGACATTATTCCG------------------------------------------------------------------------------------CGCAGAGATA---------TGACGTTTCATA-----GGACATAACTCCGTGAGGAGATATATCGTTTTTAGATCGACG------------------------------------------------------------------------------------------------------------GAGATATG-------------T---------------------------------------------------------CGC-----------------------------------------------------------------------------GTGGACTTATGTCGTT------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATG-------------T---------------------------------------------------------CGC-----------------------------------------------------------------------------GTGGACTTATGTCGTT------	24	1	1.00	1	1	0	0	0	0	0	0
...................TAAACTCGACATATCTCC----------------GTCCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0

dvi_13596

scaffold_12970:8261714-8261864 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

CTGTATTGAGGCGCCCCTCTATGCTGCAAGGTTTTGCTGTATTGAGGAGCCATTCTATACTGCAAGGTTTTGCTGTATTGAGGGGCGCCTCTATACTGCAAGGTTTTGCTGTATCGAGGCGCCCCTCTATACTGCAAGGTTTTGCTGTATTGAGGCGCCCCTCTATGCTGCAAGGTTTTACTGTATTGAGGGGCGCCTCTATACTGCAAGGTTTTGCTGTATCGAGGCGCGCCTCTATACTGCAAGGTTTT ***************************************************************************************...(((((((((((.((((.((((....((((.((((.((((....)))).)))).))))....)))).)))).)))))))))))***************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060684 140x9_0-2h_embryos_total	M047 female body	SRR060675 140x9_ovaries_total	SRR060674 9x140_ovaries_total	SRR060685 9xArg_0-2h_embryos_total	SRR060688 160_ovaries_total	SRR060656 9x160_ovaries_total	SRR060689 160x9_testes_total	SRR060676 9xArg_ovaries_total	SRR060677 Argx9_ovaries_total	SRR060657 140_testes_total	SRR060658 140_ovaries_total	SRR060679 140x9_testes_total	V116 male body	SRR060682 9x140_0-2h_embryos_total	SRR060687 9_0-2h_embryos_total	SRR060673 9_ovaries_total	SRR060678 9x140_testes_total	SRR060654 160x9_ovaries_total	V053 head	SRR060681 Argx9_testes_total	SRR060686 Argx9_0-2h_embryos_total	SRR060668 160x9_males_carcasses_total	SRR060659 Argentina_testes_total	SRR060663 160_0-2h_embryos_total	SRR060664 9_males_carcasses_total	SRR060667 160_females_carcasses_total	SRR060660 Argentina_ovaries_total
...................................................................................................................................................................................ACTGTATTGAGGGGCGCCTCTAT.................................................	23	0	10	3.30	33	6	0	8	4	4	0	1	0	3	2	0	1	0	0	0	1	1	0	1	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................AATGTATTGAGGGGCGCCTCTAT.................................................	23	1	17	1.59	27	10	0	3	5	3	0	0	0	0	2	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAATGTATTGAGGGGCGCCTCTAT.................................................	24	2	20	0.80	16	5	0	2	1	2	0	0	0	1	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1
..................................................................................GGGCGCCTCTATACTGCAAG.....................................................................................................................................................	20	0	20	0.60	12	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................ATTGAGGGGCGCCTCTATACT..........................................................................................................................................................	21	0	20	0.40	8	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................ATTGAGGGGCGCCTCTATACT..............................................	21	0	20	0.40	8	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................CCTCTATACTGCAAGGTTTTG...........................................................................................................	21	0	20	0.35	7	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TGTATTGAGGGGCGCCTCTAT.................................................	21	0	20	0.35	7	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.........................................................................TGTATTGAGGGGCGCCTCTAT.............................................................................................................................................................	21	0	20	0.30	6	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGAGGCGCGCCTCTATACTGC........	21	0	20	0.30	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	2	0	0
...............CCTCTATGCTGCAAGGTTTTG.......................................................................................................................................................................................................................	21	0	20	0.25	5	0	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AACTGTATTGAGGGGCGCCTCTAT.................................................	24	1	14	0.21	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..........................................................................GTATTGAGGGGCGCCTCTATA............................................................................................................................................................	21	0	20	0.20	4	0	0	0	0	0	0	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................GCTGTATTGAGGGGCGCCTCTA..............................................................................................................................................................	22	0	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................GCTGTATCGAGGCGCGCCTCT...............	21	0	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................CCTCTATACTGCAAGGTTTT	20	0	20	0.15	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................GCTGTATCGAGGCGCGCCTCTAT.............	23	0	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................GGGCGCCTCTATACTGCAA......................................................................................................................................................	19	0	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0
............................................................................................ATACTGCAAGGTTTTGCTGTAT.........................................................................................................................................	22	0	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
..............................................................................................................................................................CCCTCTATGCTGCGAGGTTT.........................................................................	20	1	20	0.10	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CTCTATGCTGCAAGGTTTTGCT.....................................................................................................................................................................................................................	22	0	20	0.10	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................GCTGTATTGAGGCGCCCCTCTAT.....................................................................................	23	0	20	0.10	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................GCTGTATTGAGGCGCCCCTCTA......................................................................................	22	0	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
.........................................................................................................................................................................................TTGAGGGGCGCCTCTATACTG.............................................	21	0	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GGGCGCCTCTATACTGCAAGGTTTTGCT.................................	28	0	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ACTGCAAGGTTTTGCTGTATT............................................................................................................................................................................	21	0	20	0.10	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GTATCGAGGCGCGCCTCTAT.............	20	0	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..............CCCTCTATGCTGCGAGGTTT.........................................................................................................................................................................................................................	20	1	20	0.10	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................ACTGTACTGAGGGGCGCCTCTAT.................................................	23	1	12	0.08	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................CCCCTCTATGCTGCAAGGTTT.........................................................................	21	0	15	0.07	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............CCCCTCTATGCTGCAAGGTTT.........................................................................................................................................................................................................................	21	0	15	0.07	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................AATGTATTGAGGGGCGCCTCTA..................................................	22	1	17	0.06	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................ACTGCATTGAGGGGCGCCTCTAT.................................................	23	1	18	0.06	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................AATCCAATCTATACTGCAAGGTTTTGCT.................................................................................................................................................................................	28	3	18	0.06	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................GTATTGAGGGGCGCCTCTATACT..............................................	23	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
................CTCTATGCTGCAAGGTTTTG.......................................................................................................................................................................................................................	20	0	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................CTCTATACTGCAAGGTTTTGC..........................................................................................................	21	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CTGTATTGAGGGGCGCCTCTATA................................................	23	0	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................GCGCCCCTCGATGCAGCAAGG............................................................................	21	2	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...........................................GAGGCGCCATTCTATACTGCAAGGTT......................................................................................................................................................................................	26	1	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0