ID:

dvi_1342

 Coordinate:

scaffold_12723:2318656-2318806 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.5 -16.5 -16.3

Flybase annnotation

exon [dvir_GLEANR_2594:1]; CDS [Dvir\GJ18031-cds]; intron [Dvir\GJ18031-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

--------------####################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CATAAATAAAATCAATGGAAGACTTAACCCCATTGACCAACCTTCAACAGGTATGTACAAAATAATTGGCATAGCTTCTAAATTTAATTTCATTTAAATTTCTTTTATATTTTTCTTACAGTTTTAGTTGAATGTTTTTATGTTTTCTTAACTGCCAACACAAGCAACGCGACCACTGCCCGCATATATCCAATTACAACAATATCTTATCTACAATTTTTATTTGTAAGTGTTTATTGCATGTCATTGAC
**************************************************............(((((((.(((((((..((((((((......)))))))).................(((((..((..((((((....)))))).)).))))).......))))...(((.........)))...)))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M028
head
 GSM1528803
follicle cells		 M061
embryo
 SRR060676
9xArg_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060689
160x9_testes_total
 SRR1106729
mixed whole adult body
 M027
male body		 SRR060663
160_0-2h_embryos_total
 V047
embryo
 SRR060677
Argx9_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060674
9x140_ovaries_total
 V053
head
 SRR060655
9x160_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060681
Argx9_testes_total
.........AATCGATCGAAGACTTAATC.............................................................................................................................................................................................................................. 20 3 6 1.33 8 0 7 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................GGAAGACTTAACCCCATTGACCAACCTT............................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CACAAGCAGCGCGACCACTGC........................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GGAAGACTTAACCCCATTGACCAACCTTC.............................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AATCAGTCGAGGACTTAACCC............................................................................................................................................................................................................................. 21 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................GACTTAACCCCATTGACCAACCTTCAAC........................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TCTTACAGTTTTGGTTGAATGTT................................................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGCCAACACAAGCAACGCGACCACTGCC....................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................ACACAAGCAACGCGACCACTGCCCGC.................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TGAATGTTTTTATGTTTTCTTAACTGC................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................CATTGACCAACCTTCAACAGT........................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ATCGGTGGAGGACTTAACC.............................................................................................................................................................................................................................. 19 3 5 0.20 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TATAGTTGATTGTTTTAATGTTT.......................................................................................................... 23 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........AATAAACCGAAGACTTAACC.............................................................................................................................................................................................................................. 20 3 16 0.13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
..........ATCAGTCGAGGACTTAACC.............................................................................................................................................................................................................................. 19 3 16 0.13 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.ATAAATAAAATCATTGGA........................................................................................................................................................................................................................................ 18 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........ATCGATCGAAGACTTAATC.............................................................................................................................................................................................................................. 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
................................................................................................................................TGAATGGTTTTATTTTTTCT....................................................................................................... 20 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........AATCGATTGAAGACTTAATC.............................................................................................................................................................................................................................. 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTCAGTGTGTATTGCTTGTC...... 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
............CACTGGAGGACTGAACCC............................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTATTTATTTTAGTTACCTTCTGAATTGGGGTAACTGGTTGGAAGTTGTCCATACATGTTTTATTAACCGTATCGAAGATTTAAATTAAAGTAAATTTAAAGAAAATATAAAAAGAATGTCAAAATCAACTTACAAAAATACAAAAGAATTGACGGTTGTGTTCGTTGCGCTGGTGACGGGCGTATATAGGTTAATGTTGTTATAGAATAGATGTTAAAAATAAACATTCACAAATAACGTACAGTAACTG
**************************************************............(((((((.(((((((..((((((((......)))))))).................(((((..((..((((((....)))))).)).))))).......))))...(((.........)))...)))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060683
160_testes_total
 V047
embryo
 M027
male body		 M047
female body
 SRR060657
140_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 V116
male body		 V053
head
..................................................................................................................................................................................GGGCGTATATAGGTTAATGTT.................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..........................................................TTTTATTAACCGTATCGAAGATT.......................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................................................................................CGATATAAAAAGAATGTCAAAAT............................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
................................AACTGGTTGGAAGTTTTGCA....................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0
....................CTGAAGTGGGGTCAATGGTTG.................................................................................................................................................................................................................. 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................TGGGTAACTGGTTGGAAGTTGT.......................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................................ACGGTTGTGTTCGTTGCGCTG.............................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
....................CTGAATTGGGGTCAGTGCTTG.................................................................................................................................................................................................................. 21 3 1 1.00 1 0 0 0 0 0 0 1 0 0
.......................................................................................................CGATATAAAAAGAAAGTCAAAAT............................................................................................................................. 23 3 4 0.25 1 0 1 0 0 0 0 0 0 0
.......................................................................................................CTATATAAAAGGAATGTCAAAAT............................................................................................................................. 23 3 4 0.25 1 0 1 0 0 0 0 0 0 0
.........................................................................................................GTATAAAAAGACTGTCATAAT............................................................................................................................. 21 3 14 0.14 2 0 0 0 0 0 0 0 0 2
.........................................................................................................GTAGAAAAAGAATGTCATAAT............................................................................................................................. 21 3 13 0.08 1 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................TGTTTGTTGCGCTGGGCACG........................................................................ 20 3 17 0.06 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12723:2318606-2318856 - dvi_1342 CATAA--------------------------------------A-TAAAATCAATGGAAGACTTAACCCCATTGACCAACCTTCAACAGGTAT-----------------------------------------GTACAAAATAATTGG------CATAGCTTCTAAAT--TTAATT----------TC------ATTTAAATT-----------TCTT--------TTATA-------TTTT-T-CTTACAGTTTTAGTTGAA----TGTTTTT---ATGTTT-TCTTAACTGCCAAC-ACAAGCAACGC-GAC---CACTG-----------------------------------------------------------------------------------CCCGCATATATCCAATTAC--AACAAT------------------------ATCTTATCTAC--------AAT--TTT-TATTTGTAAGT----------------------------------GTTTATTGCATGTCATTGAC
droMoj3 scaffold_6500:9037174-9037459 + CATAAAAGAGAGAAAGAAAAAAAAAAAACAACAAGTCAAAGCAA-GAAAATCAATGGAAGACTTAACCCCATTGACAAACCTTCAACAGGTAT-----------------------------------------GTGGAAAATAGTTGG------TATACCAACTACGA--TTAATT----------TC------AGTTAATTT-----------TCAT--------TTATG-------TTTC-TCCTTACAGTTTTAGTTGAA----CGTTATTTATATGTTT-TCTTAACTGCCAGC-GCAATCAACGC-GCC---AACTG-----------------------------------------------------------------------------------CCCGCAT--ATCCATTTAC--TACAGT---------ATCTAGATAACTTA-------TCTAG--------AAT--TTT-TATTTGTAAGT----------------------------------GTTTTT-------------C
droGri2 scaffold_15252:9276453-9276687 - AGTGA--------------------------------------A-AAAAATCAATGGAAGACTTGACGCCGTTAACCAACCTTCAACAGGTAT-----------------------------------------GCACAAAATGG---CATTTGGCATAG-------TT--TGAT-T----------TG------TTTTAATTT-----------TCAT--------TGTTG-------GTTT-T-CTTACAGTTTTAGTTCCA----AGTT-TT---ATGTTT-TCTTAACTGCCAACTGCATTCAACGC-CCC-ATAACTG-----------------------------------------------------------------------------------CCCGCAT--ATTCAATTAC--AGT-------------------------------AATTTACCA-AACACAATTCTTT-TGTTTGTAAGT----------------------------------GTTTAT-------------T
droWil2 scf2_1100000004908:20499-20712 - CAAAA--------------------------------------ACAAAAATCAATGGAGGATTTGACACCGTTGGCCAACCTTCAACAGGTATCA-AA--TATATC-AA------------------------------------A-------------------------ATATTT----------TC------AGTTAATATT------------A-T-------TTATGATTTACAATT--T-CTTACAGTTTTAGTTCATTCAGTGA--TT----TGATT-TTTTACC---CTA-----CG--------ACCACCGCTGCCACGTCATTCCACAATAA-----------------------------------TA----ATT---CC----------------------------AAAAA----------------------------------------TTAT--------AAT--TTTTCTTTTGTAAGT----------------------------------TT-----------------T
dp5 4_group1:4125499-4125764 - AGAAG----------------------------------------AAAAATCAATGGAGGACTTGACACCATTAACCAACCTTCAACAGGTAGAA-AA--TACATA-CATAC--------ACGAGTATGTACATATACATTTTGCATGT------------------AT--TTATATGGGAATTTTTCCATTTTCAGTTGATTT--------TC---ATTCTGTTTATTATG-------ATT--T-CTTACAGTTTTAGTTCCA----ATAA-TT---CCA-------------------------------------------------------CAATAAC-TACTGTGCA----TTCCC-------------------------------------------------------------A---------ATATTTTGT--------------------------GACT---------TAT-TATCCGTAAGTGAAAAAATGTTATTACATGCATATCTTTGTAATTGC-----------------T
droPer2 scaffold_5:1138922-1139187 + AGAAG----------------------------------------AAAAATCAATGGAGGACTTGACACCATTAACCAACCTTCAACAGGTAGAA-AA--TACATA-CATAT--------ACGAGTATGTACATATACATTTTGCATGA------------------AT--TTATATGGGAATTTTTCCATTTTCAGTTGATTT--------TC---ATTCTGTTTATTATG-------ATT--T-CTTACAGTTTTAGTTCCA----ATAA-TT---CCA-------------------------------------------------------CAATAAC-TACTGTGCA----TTCCC-------------------------------------------------------------A---------ATATTTTGT--------------------------GACT---------TAT-TATCCGTAAGTGAAAAAATGTTATTACATGCATATCTTTATAATTGC-----------------T
droAna3 scaffold_12916:5468864-5469102 + CGGGA----------------------------------------AAAAATCAATGGAGGACCTTACGCCTCTAACCAACCTTCAACAGGTAGAAACA--CCC---ACACA----------CGTAAATCCACATGCGCATGCCAAATGT------------------ATTTTTGTTT----------TGAT-----------TTTG--T-TGCCT--A-TATGTTAATTATG-------ATTT-T-TTTGCAGTTTTAGTTCCA----AGTTTTA---TTGTTT-ATTCATCTGCCTG-----AAA-C---------------------------------------CGCA------------------ACCA-CAACA----ATT---CC--------------AACCGCA-AT---------------------------CTCTATTTGGCATTTCTCTAATTTGC---------------------------------------------------------------------------------C
droBip1 scf7180000396568:1366856-1367126 - CGGGA----------------------------------------AAAAATCAATGGAGGACCTTACGCCTTTAACCAACCTTCAACAGGTAGAAACA--CCC---ACACACCAGCACACATGTCAATCCACATGCGCATGCCAAATGT------------------GT--TTATTT----------TGAT-----------TTAGT-T-TGCCC--A-TATGTTAATTATA-------ATTT-T-TTTGCAGTTTTAGTTCCA----AGTGTTT---TTGTTT-TTTCAACTGCCTG-----CGAGT---------------------------------------TAAG--CGCA------------ACCA-CAACA----ATT---TC--------------AACCGCA-AT---------------------------ATCTATTTGGCATTTCGCTAATTCTC--------CA---TAT-TTTATGTAAGT----------------------------------GA-----------------T
droKik1 scf7180000302232:86306-86478 + TTG------------------------------------------TAAA------------------------------------------------------------------------------------------------TTTG------------------TT--TTCTCT----------TGAT-----------TTT-----------CTT--------TTTTA-------TTTT-C-GGTTTACTTTTGACGGGA----CTCTTTG----TGGTTATCCTCGCACACACC-AA--TCACTCC-A-----------------------CAAACACACTCTGTACC----CATGC-------------------------------------------------------------CACACACAGT---------ATCT-----------------------------------CGT-TAGGCA---A----------------------TAGTTTTGTAAATAGTTCAAAGACATCAGCAAC
droFic1 scf7180000454117:36667-36925 + GGA------------------------------------------AAAAATCGATGGAGGACCTGACGCCATTAACCAACCTTCAACAGGTAGAA-CA--CCC---ACACAT--------CTGTCTATCCAA-CGCGCATGCTGAATGG------------------GT--TTACTT----------TTAT-----------TT---AC-AGTCC--C-TCTATTAATTATG-------ATT--T-CTTTCAGTTTTAGTTCGA----ATAT-TA---TTATTT-GTTCAACTGCC----------------------------------------------------GAG----TTCTCCGACTATCAACCAACAACATTCGACC---CC--------------ACCCACA-CT---------------------------ATCAAGTTGGGATACATCTAATTTGC--------GA---TAT-TTTCTGTGAGT------------------------------------------------------
droEle1 scf7180000490238:1193-1342 + TATT---------------------------------------------------------------TTCAAGATTTAATTTTCAATAGATTTAA-AT---------------------------------------------------------------------------------------------------------C-----------TCTT--------TTGCA-------CTTT-T-CATACTTCTTTGTTAAAA----AT----------------------TGCTCC-----ATCTT-GCTTGAAACAAGGTCCACGTATT---------------GACG-------------------------------------------------------CTTTCATAAATTCGAAAAT--GGC----------------------------------------------AAT--CTCCTTTGCACTCTT----------------------------------TG-----------------T
droRho1 scf7180000780102:124902-125166 - GGA------------------------------------------AAAAATCAATGGAGGACCTGACGCCTTTAACGAACCTTCAACAGGTAGCA-CA--CCC---ACACAT--------CTGTCCACCCACATGTGCATGCTGAATGG------------------GT--TTAT-T----------TGAT-----------TTT--AT-CGTCC--A-TCTGTTAATTATG-------ATT--T-CTTTCAGTTCTAGTCCCA----AGAT-TA---TTATTT-GCCCAACTTTCCA-----AAAGC---------------------------------------CGAG----TACAA----------C----GAC-------TACTGCAAATCAGTGTATAAACCCACA-AT---------------------------ATCACGTTGGCATCCATCTAATTTGC--------GA---TAT-TCTCTGTAAGT----------------------------------G-------------------
droBia1 scf7180000301500:260636-260804 - GGA------------------------------------------AAAAATCAATGGAGGACCTGACGCCATTGACTAACCTTCAACAGGTAGAA-CA--CCC---ACACAC--------CCGACCATCCGCACGCGCATGCTGAATGG------------------GT--TTATTT----------TGCT-----------TATG--T-CGCTC--A-TCTGTTAATTATG-------TTTTCC-TTCTCAGTTTTAGTTCAA----AGAT-TA---TTATTT-TAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415629:93696-93882 + GGA------------------------------------------AAAAATCAATGGAGGACCTGACGCCATTAACCAACCTTCAACAGGTAGAA-CA--CCC---ACACAT--------CCGACCATCCACATGCGCATGTTGATTGG------------------GT--TTATTT----------TGAT-----------TTT--AT-CTTTC--A-TCTGTTAATTATC-------CTTTGT-TTTTCAGTTTTAGTTCCA----AGAT-TA---TTATTT-ATTCCATTGCCCA-----AAAGC---------------------------------------CGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409490:1110598-1110810 - AGG------------------------------------------GATTTTTAAGGAAATTT--------------------------------------------------------------------------GTATA-AGAATGT------------------AC--TTATTT----------TTAA------T----ATTA-TT-TCAAT--A-TTTT----TTAAC-------ATTT-T-CTTACTCTTATTTTTGAAAAGGAGTATTT---TTTCAT-TAGGAAATGCTTA-----AAAAT-GACAAAATAATGCAATAACTATA---------------TATGTT----TTTAT-------------------------------------------------------------A---------ACATTTCTT--------------------------GATTATATAAG--CCT-C-TCTGTTAAT-----------------C----------------ATTTATCATTAATCATTAAC
dm3 chr2L:8384849-8385088 + GGA------------------------------------------AAAAATCAATGGAGGACCTGACACCTTTGACCAACCTTCAACAGGTAGAG-CAGAGCCAGA-CACAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GT--TTATTT----------TGAT-----------TTCGTATCCGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTTCAGTTTTAGTTTCA----ACAT-TA---TCATTT-TTCCAACTGCCCA-----AAAGA---------------------------------------CGCG----TTC------------CTA-CAAC-------T----C--------------AAC---C-AT---------------------------CTCCAGTTGAGATACATCTAATTTCC--------GA-----------------------------------------------------------------------T
droSim2 2l:8112025-8112229 + dsi_11596 GGA------------------------------------------AAAAATCAATGGAGGACCTGACACCATTGACCAACCTTCAACAGGTAGAG-CAGAGCCAGA-CACAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GT--TTATTT----------TGAT-----------TTCGTTT-CGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTTCAGTTTTAGTTGCA----ACAT-TA---TCATTT-TTCCAACTGCCCA-----AAAGA---------------------------------------CGCG----TTC------------CGA-CAAC-------TA-------------------C-----------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_3:3881469-3881660 + GGA------------------------------------------AAAAATCAATGGAGGACCTGACACCATTGACCAACCTTCAACAGGTAGAG-CAGATCCAGA-CACAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GT--TTCTTT----------TGAT-----------TTCGTAT-CGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTTCAGTTTTAGTTGCA----ACAT-TA---TCATTT-TTCCAACTGCCCA-----AACGA---------------------------------------CGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:11023103-11023292 + GGA------------------------------------------AAAAATCAATGGAGGACTTGACACCACTGACCAACCTTCAACAGGTAGGG-CA--GTCACA-CACAT--------CTGGTCATCAAATTGCGCATGCTAATTTG------------------GT--TTATTT----------TGAT-----------TTCGAAT-CGAAC--A-TCTGTTAATTATG-------TTTT-T-CTTTCAGTTTTAGTTCCA----ACAT-TA---TCATTT-TTTTAACTGCCCA-----AAAGA---------------------------------------CGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:17294514-17294666 + GAA------------------------------------------AAAAATCAATGGAGGACTTGACACCACTGACCAACCTTCAACAGGTAGAA-CA--GCCACA-CATAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GC--TTATTT----------TGAT-----------TTTGTAT-CGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTCCAGTTTTAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CATAA--------------------------------------A-TAAAATCAATGGAAGACTTAACCCCATTGACCAACCTTCAACAGGTAT-----------------------------------------GTACAAAATAATTGG------CATAGCTTCTAAAT--TTAATT----------TC------ATTTAAATT-----------TCTT--------TTATA-------TTTT-T-CTTACAGTTTTAGTTGAA----TGTTTTT---ATGTTT-TCTTAACTGCCAAC-ACAAGCAACGC-GAC---CACTG-----------------------------------------------------------------------------------CCCGCATATATCCAATTAC--AACAAT------------------------ATCTTATCTAC--------AAT--TTT-TATTTGTAAGT----------------------------------GTTTATTGCATGTCATTGACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................GGAAGACTTAACCCCATTGACCAACCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.......................................................GGAAGACTTAACCCCATTGACCAACCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................GACTTAACCCCATTGACCAACCTTCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGCCAAC-ACAAGCAACGC-GAC---CACTG-----------------------------------------------------------------------------------CC..............................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AC-ACAAGCAACGC-GAC---CACTG-----------------------------------------------------------------------------------CCCGC...........................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TGAA----TGTTTTT---ATGTTT-TCTTAACTGC...............................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................CATTGACCAACCTTCAACAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
droMoj3
CATAAAAGAGAGAAAGAAAAAAAAAAAACAACAAGTCAAAGCAA-GAAAATCAATGGAAGACTTAACCCCATTGACAAACCTTCAACAGGTAT-----------------------------------------GTGGAAAATAGTTGG------TATACCAACTACGA--TTAATT----------TC------AGTTAATTT-----------TCAT--------TTATG-------TTTC-TCCTTACAGTTTTAGTTGAA----CGTTATTTATATGTTT-TCTTAACTGCCAGC-GCAATCAACGC-GCC---AACTG-----------------------------------------------------------------------------------CCCGCAT--ATCCATTTAC--TACAGT---------ATCTAGATAACTTA-------TCTAG--------AAT--TTT-TATTTGTAAGT----------------------------------GTTTTT-------------CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................ATTTATATGTTT-TCTTAACTGCCAGC-GCA.......................................................................................................................................................................................................................................................2911.001100000
..................................GTCAAAGCAA-GAAAATCAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
AGTGA--------------------------------------A-AAAAATCAATGGAAGACTTGACGCCGTTAACCAACCTTCAACAGGTAT-----------------------------------------GCACAAAATGG---CATTTGGCATAG-------TT--TGAT-T----------TG------TTTTAATTT-----------TCAT--------TGTTG-------GTTT-T-CTTACAGTTTTAGTTCCA----AGTT-TT---ATGTTT-TCTTAACTGCCAACTGCATTCAACGC-CCC-ATAACTG-----------------------------------------------------------------------------------CCCGCAT--ATTCAATTAC--AGT-------------------------------AATTTACCA-AACACAATTCTTT-TGTTTGTAAGT----------------------------------GTTTAT-------------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................CGC-CCC-ATAACTG-----------------------------------------------------------------------------------CCCGCAT--ATT....................................................................................................................................2311.00110
droWil2
CAAAA--------------------------------------ACAAAAATCAATGGAGGATTTGACACCGTTGGCCAACCTTCAACAGGTATCA-AA--TATATC-AA------------------------------------A-------------------------ATATTT----------TC------AGTTAATATT------------A-T-------TTATGATTTACAATT--T-CTTACAGTTTTAGTTCATTCAGTGA--TT----TGATT-TTTTACC---CTA-----CG--------ACCACCGCTGCCACGTCATTCCACAATAA-----------------------------------TA----ATT---CC----------------------------AAAAA----------------------------------------TTAT--------AAT--TTTTCTTTTGTAAGT----------------------------------TT-----------------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................GATT-TTTTACC---CTA-----CG--------ACCAC........................................................................................................................................................................................................................................2120.50101000
................................................................................................................................................................................................................................................................................................................G--------ACCACCGCTGCCACGTCATTCC.......................................................................................................................................................................................................................2320.50100100
..................................................................CACCGTTGGCCAACCTTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000
dp5
AGAAG----------------------------------------AAAAATCAATGGAGGACTTGACACCATTAACCAACCTTCAACAGGTAGAA-AA--TACATA-CATAC--------ACGAGTATGTACATATACATTTTGCATGT------------------AT--TTATATGGGAATTTTTCCATTTTCAGTTGATTT--------TC---ATTCTGTTTATTATG-------ATT--T-CTTACAGTTTTAGTTCCA----ATAA-TT---CCA-------------------------------------------------------CAATAAC-TACTGTGCA----TTCCC-------------------------------------------------------------A---------ATATTTTGT--------------------------GACT---------TAT-TATCCGTAAGTGAAAAAATGTTATTACATGCATATCTTTGTAATTGC-----------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................CAATGGAGGACTTGACACCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................GTTTTAGTTCCA----ATAA-TT---C...............................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
AGAAG----------------------------------------AAAAATCAATGGAGGACTTGACACCATTAACCAACCTTCAACAGGTAGAA-AA--TACATA-CATAT--------ACGAGTATGTACATATACATTTTGCATGA------------------AT--TTATATGGGAATTTTTCCATTTTCAGTTGATTT--------TC---ATTCTGTTTATTATG-------ATT--T-CTTACAGTTTTAGTTCCA----ATAA-TT---CCA-------------------------------------------------------CAATAAC-TACTGTGCA----TTCCC-------------------------------------------------------------A---------ATATTTTGT--------------------------GACT---------TAT-TATCCGTAAGTGAAAAAATGTTATTACATGCATATCTTTATAATTGC-----------------TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CGGGA----------------------------------------AAAAATCAATGGAGGACCTTACGCCTCTAACCAACCTTCAACAGGTAGAAACA--CCC---ACACA----------CGTAAATCCACATGCGCATGCCAAATGT------------------ATTTTTGTTT----------TGAT-----------TTTG--T-TGCCT--A-TATGTTAATTATG-------ATTT-T-TTTGCAGTTTTAGTTCCA----AGTTTTA---TTGTTT-ATTCATCTGCCTG-----AAA-C---------------------------------------CGCA------------------ACCA-CAACA----ATT---CC--------------AACCGCA-AT---------------------------CTCTATTTGGCATTTCTCTAATTTGC---------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................GACCTTACGCCTCTAACCAACCTTCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................CCA-CAACA----ATT---CC--------------AACCGCA-.........................................................................................................................................2011.001010000
.........................................................AGGACCTTACGCCTCTAACCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
CGGGA----------------------------------------AAAAATCAATGGAGGACCTTACGCCTTTAACCAACCTTCAACAGGTAGAAACA--CCC---ACACACCAGCACACATGTCAATCCACATGCGCATGCCAAATGT------------------GT--TTATTT----------TGAT-----------TTAGT-T-TGCCC--A-TATGTTAATTATA-------ATTT-T-TTTGCAGTTTTAGTTCCA----AGTGTTT---TTGTTT-TTTCAACTGCCTG-----CGAGT---------------------------------------TAAG--CGCA------------ACCA-CAACA----ATT---TC--------------AACCGCA-AT---------------------------ATCTATTTGGCATTTCGCTAATTCTC--------CA---TAT-TTTATGTAAGT----------------------------------GA-----------------TSizeHit CountTotal NormTotal
No Reads
droKik1
TTG------------------------------------------TAAA------------------------------------------------------------------------------------------------TTTG------------------TT--TTCTCT----------TGAT-----------TTT-----------CTT--------TTTTA-------TTTT-C-GGTTTACTTTTGACGGGA----CTCTTTG----TGGTTATCCTCGCACACACC-AA--TCACTCC-A-----------------------CAAACACACTCTGTACC----CATGC-------------------------------------------------------------CACACACAGT---------ATCT-----------------------------------CGT-TAGGCA---A----------------------TAGTTTTGTAAATAGTTCAAAGACATCAGCAACSizeHit CountTotal NormTotal
No Reads
droFic1
GGA------------------------------------------AAAAATCGATGGAGGACCTGACGCCATTAACCAACCTTCAACAGGTAGAA-CA--CCC---ACACAT--------CTGTCTATCCAA-CGCGCATGCTGAATGG------------------GT--TTACTT----------TTAT-----------TT---AC-AGTCC--C-TCTATTAATTATG-------ATT--T-CTTTCAGTTTTAGTTCGA----ATAT-TA---TTATTT-GTTCAACTGCC----------------------------------------------------GAG----TTCTCCGACTATCAACCAACAACATTCGACC---CC--------------ACCCACA-CT---------------------------ATCAAGTTGGGATACATCTAATTTGC--------GA---TAT-TTTCTGTGAGT------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TATT---------------------------------------------------------------TTCAAGATTTAATTTTCAATAGATTTAA-AT---------------------------------------------------------------------------------------------------------C-----------TCTT--------TTGCA-------CTTT-T-CATACTTCTTTGTTAAAA----AT----------------------TGCTCC-----ATCTT-GCTTGAAACAAGGTCCACGTATT---------------GACG-------------------------------------------------------CTTTCATAAATTCGAAAAT--GGC----------------------------------------------AAT--CTCCTTTGCACTCTT----------------------------------TG-----------------TSizeHit CountTotal NormTotal
No Reads
droRho1
GGA------------------------------------------AAAAATCAATGGAGGACCTGACGCCTTTAACGAACCTTCAACAGGTAGCA-CA--CCC---ACACAT--------CTGTCCACCCACATGTGCATGCTGAATGG------------------GT--TTAT-T----------TGAT-----------TTT--AT-CGTCC--A-TCTGTTAATTATG-------ATT--T-CTTTCAGTTCTAGTCCCA----AGAT-TA---TTATTT-GCCCAACTTTCCA-----AAAGC---------------------------------------CGAG----TACAA----------C----GAC-------TACTGCAAATCAGTGTATAAACCCACA-AT---------------------------ATCACGTTGGCATCCATCTAATTTGC--------GA---TAT-TCTCTGTAAGT----------------------------------G-------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGA------------------------------------------AAAAATCAATGGAGGACCTGACGCCATTGACTAACCTTCAACAGGTAGAA-CA--CCC---ACACAC--------CCGACCATCCGCACGCGCATGCTGAATGG------------------GT--TTATTT----------TGCT-----------TATG--T-CGCTC--A-TCTGTTAATTATG-------TTTTCC-TTCTCAGTTTTAGTTCAA----AGAT-TA---TTATTT-TAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GGA------------------------------------------AAAAATCAATGGAGGACCTGACGCCATTAACCAACCTTCAACAGGTAGAA-CA--CCC---ACACAT--------CCGACCATCCACATGCGCATGTTGATTGG------------------GT--TTATTT----------TGAT-----------TTT--AT-CTTTC--A-TCTGTTAATTATC-------CTTTGT-TTTTCAGTTTTAGTTCCA----AGAT-TA---TTATTT-ATTCCATTGCCCA-----AAAGC---------------------------------------CGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGG------------------------------------------GATTTTTAAGGAAATTT--------------------------------------------------------------------------GTATA-AGAATGT------------------AC--TTATTT----------TTAA------T----ATTA-TT-TCAAT--A-TTTT----TTAAC-------ATTT-T-CTTACTCTTATTTTTGAAAAGGAGTATTT---TTTCAT-TAGGAAATGCTTA-----AAAAT-GACAAAATAATGCAATAACTATA---------------TATGTT----TTTAT-------------------------------------------------------------A---------ACATTTCTT--------------------------GATTATATAAG--CCT-C-TCTGTTAAT-----------------C----------------ATTTATCATTAATCATTAACSizeHit CountTotal NormTotal
No Reads
dm3
GGA------------------------------------------AAAAATCAATGGAGGACCTGACACCTTTGACCAACCTTCAACAGGTAGAG-CAGAGCCAGA-CACAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GT--TTATTT----------TGAT-----------TTCGTATCCGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTTCAGTTTTAGTTTCA----ACAT-TA---TCATTT-TTCCAACTGCCCA-----AAAGA---------------------------------------CGCG----TTC------------CTA-CAAC-------T----C--------------AAC---C-AT---------------------------CTCCAGTTGAGATACATCTAATTTCC--------GA-----------------------------------------------------------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................CTTCAACAGGTAGAG-CAGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................21132.003200000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
..A------------------------------------------AAAAATCAATGGAGGACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21112.00120000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000020000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000030
.....................................................ATGGAGGACCTGACACCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................A-----AAAGA---------------------------------------CGCG----TTC------------CTA-CAAC-------T----................................................................................................................................................................2118.0080000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000020000
...................................................................................................................................ATTGCGCATGCTGAATGG------------------GT--T..........................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100
.............................................................................................................................CATCAAATTGCGCATGCTGAA....................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTT-TTCCAACTGCCCA-----AAAGA---------------------------------------...........................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AAATTGCGCATGCTGAATGG------------------G..............................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000010
....................................................AATGGAGGACCTGACACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................TTCCAACTGCCCA-----AAAGA---------------------------------------CGCG----...................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCAATGGAGGACCTGACACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000010030
..................................................................................................................................................................................................................................................................................................................................................................................CTA-CAAC-------T----C--------------AAC---C-AT---------------------------CTCCAG......................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
..................................................................................................................................AATTGCGCATGCTGAATGG------------------GT--...........................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000030010
........................................................GAGGACCTGACACCTTTGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..A------------------------------------------AAAAATCAATGGAGGACCTGACACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CAT--------CTGGTCATCAAATTGCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000010
............................................................................................................................................................................................................................................................................................................................................................GCG----TTC------------CTA-CAAC-------T----C--------------AAC---C-AT---------------------------............................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TTCCAACTGCCCA-----AAAGA---------------------------------------CGC........................................................................................................................................................................................................2114.0040000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................T-TTCCAACTGCCCA-----AAAGA---------------------------------------CG.........................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010
.................................................................................TTCAACAGGTAGAG-CAGAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................CAACAGGTAGAG-CAGAGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
............................................................................................................ACAT--------CTGGTCATCAAATTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ATCAATGGAGGACCTGACACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010
..................................................................................................................................................................................................................................................................................................................GA---------------------------------------CGCG----TTC------------CTA-CAAC-------T----C--------------AAC---...........................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................TATTT----------TGAT-----------TTCGTATCCGTA................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AAATTGCGCATGCTGAATGG------------------GT--...........................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................TTC------------CTA-CAAC-------T----C--------------AAC---C-AT---------------------------CTC.........................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................GACCAACCTTCAACAGGTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................AACAGGTAGAG-CAGAGCCAGA-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000010
............................................................................................................................TCATCAAATTGCGCATGCTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................TGACACCTTTGACCAACCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CGCG----TTC------------CTA-CAAC-------T----C--------------AAC---C-A........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010
........................................................................TGACCAACCTTCAACAGGTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CG----TTC------------CTA-CAAC-------T----C--------------AAC---C-AT---------------------------CTCCAGT.....................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................T-TA---TCATTT-TTCCAACTGCCC.............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ACTGCCCA-----AAAGA---------------------------------------CGCG----TTC------------C...................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................AG-CAGAGCCAGA-CACAT--------CTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................................................................................................TTC------------CTA-CAAC-------T----C--------------AAC---C-AT---------------------------CTCCAGT.....................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TT----------TGAT-----------TTCGTATCCGTAC--A-...........................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................T-TA---TCATTT-TTCCAACTGCC..............................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAATCAATGGAGGACCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................CA-----AAAGA---------------------------------------CGCG----TTC------------CTA-CAAC-------T----C--------------AAC---C-AT---------------------------............................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................C--------------AAC---C-AT---------------------------CTCCAGTTGAGATA..............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................TCAACAGGTAGAG-CAGAGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CTGCCCA-----AAAGA---------------------------------------CGCG----TTC------------CT..................................................................................................................................................................................2112.0020000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................................................................................................................................................................CCAACTGCCCA-----AAAGA---------------------------------------CGCG----T..................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
................................................................................................................................................................................................................TCCGTAC--A-TCTGTTAATTATG-------.......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TGG------------------GT--TTATTT----------TGAT-----------TTCGTA......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................TGACCAACCTTCAACAGGTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................ACCTTCAACAGGTAGAG-CAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TA-CAAC-------T----C--------------AAC---C-AT---------------------------CTCCAGT.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGATACATCTAATTTCC--------G.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GA---------------------------------------CGCG----TTC------------CTA-CAAC-------T----C--------------AAC---C-A........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GA-CACAT--------CTGGTCATCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TATCCGTAC--A-TCTGTTAATTA................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGA------------------------------------------AAAAATCAATGGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CCTTTGACCAACCTTCAACAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................CTGACACCTTTGACCAACCTTCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................................................................................................................CAACTGCCCA-----AAAGA---------------------------------------CGCG----TTT------------....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GGA------------------------------------------AAAAATCAATGGAGGACCTGACACCATTGACCAACCTTCAACAGGTAGAG-CAGAGCCAGA-CACAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GT--TTATTT----------TGAT-----------TTCGTTT-CGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTTCAGTTTTAGTTGCA----ACAT-TA---TCATTT-TTCCAACTGCCCA-----AAAGA---------------------------------------CGCG----TTC------------CGA-CAAC-------TA-------------------C-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.GA------------------------------------------AAAAATCAATGGAGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.......................................................GGAGGACCTGACACCATTGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.......................................................GGAGGACCTGACACCATTGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....................................................AATGGAGGACCTGACACCATTGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
..................................................................................................................................AATTGCGCATGCTGAATGG------------------G..............................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
droSec2
GGA------------------------------------------AAAAATCAATGGAGGACCTGACACCATTGACCAACCTTCAACAGGTAGAG-CAGATCCAGA-CACAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GT--TTCTTT----------TGAT-----------TTCGTAT-CGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTTCAGTTTTAGTTGCA----ACAT-TA---TCATTT-TTCCAACTGCCCA-----AACGA---------------------------------------CGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................ATGGAGGACCTGACACCATTGACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.................................................ATCAATGGAGGACCTGACACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droYak3
GGA------------------------------------------AAAAATCAATGGAGGACTTGACACCACTGACCAACCTTCAACAGGTAGGG-CA--GTCACA-CACAT--------CTGGTCATCAAATTGCGCATGCTAATTTG------------------GT--TTATTT----------TGAT-----------TTCGAAT-CGAAC--A-TCTGTTAATTATG-------TTTT-T-CTTTCAGTTTTAGTTCCA----ACAT-TA---TCATTT-TTTTAACTGCCCA-----AAAGA---------------------------------------CGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................TTTTAACTGCCCA-----AAAGA---------------------------------------CG.........................................................................................................................................................................................................2011.00100000010000
droEre2
GAA------------------------------------------AAAAATCAATGGAGGACTTGACACCACTGACCAACCTTCAACAGGTAGAA-CA--GCCACA-CATAT--------CTGGTCATCAAATTGCGCATGCTGAATGG------------------GC--TTATTT----------TGAT-----------TTTGTAT-CGTAC--A-TCTGTTAATTATG-------TTTT-T-GTTCCAGTTTTAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................AAATCAATGGAGGACTTGACACCACTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010

Generated: 05/16/2015 at 09:48 PM