ID:

dvi_13125

 Coordinate:

scaffold_12970:4243541-4243696 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.9 -12.7 -12.2 -12.2

Flybase annnotation

exon [dvir_GLEANR_4111:2]; CDS [Dvir\GJ19225-cds]; exon [dvir_GLEANR_4111:1]; CDS [Dvir\GJ19225-cds]; intron [Dvir\GJ19225-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
mature
star
  1. scaffold_12855:3821016-3821037 +
  2. scaffold_12875:7013587-7013608 -
  3. scaffold_12875:19860207-19860228 +
  4. scaffold_12963:15156713-15156734 +
  5. dvi_13125  scaffold_12970:4243611-4243632 +
  6. scaffold_13052:1868993-1869014 -

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTGTTACCTGGCGACGCATCTCGCGCAGCATCGCAGCAACCAGCCGGACGTGGGGGAGCTGGCTACGGCAACGTTACAGCGGCTGCCCACACGCAAGCAGCAGTCGCGACAGCAACAGCAACAGCAGAAGCAGCAGCAACAGCAGCAACAACAACTGCAGCAACAGCAAAAACAACAGCAACAGCAGCTGCAAGAAAAACAACAGCTACAACAGCAGCAGCGAAAGCAACATATGCGCTATGATCGCCACGACGA
************************************************************************************************************************...................................(((((((.........................))))).))...********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 SRR060657
140_testes_total
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V047
embryo
 SRR060678
9x140_testes_total
 V116
male body		 SRR060668
160x9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060663
160_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060680
 9xArg_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
....................CTCGCGCAGCATCGCAGC.......................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GCAACAGCAGCTGCAAGAAA.......................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................AACCAGCCGGACGTGGGGGAGCTGGC................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AGCAACAGCAGCTGCAAGAAAAACAAC.................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................ATCGCAGCAACCAGCCGGACGTGGGGGA...................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................ACCAGCCGGACGTGGGGGAGC.................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTGGGGGAACCGGCTACGAC.......................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACAACAGCAACAGCAGCTACAAG............................................................. 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AACAGCAGAAGCAGCAGCAACA.................................................................................................................. 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................GCAACAGCAGAAGCAGCAGC...................................................................................................................... 20 0 13 0.15 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................CAACAACTGCAGCAACAGCAA...................................................................................... 21 0 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................CAACAGCAACAGCAGAAGCAG.......................................................................................................................... 21 0 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................AGCCGGACGTGGGTGGGTTG.................................................................................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGCAGAAGCAGCAGCAACAG................................................................................................................. 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CAGCAACAGCAGAAGCAGCA........................................................................................................................ 20 0 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................AGCAACAGCAGAAGCAGCAG....................................................................................................................... 20 0 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................ACAACGGCAACAGCAGCTGCA............................................................... 21 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................AGCAACAGCAGAAGCAGCA........................................................................................................................ 19 0 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AACAACAACTGCAGCAACA.......................................................................................... 19 0 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................GCAGCAACAGCAGCAACAACA...................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................GCAGCAGCAACAGCAGCAACA......................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CAGCAGCTCCAAAAAAAACA...................................................... 20 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................AGCAGAAGCAGCAGCAACAT................................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................TGGGGGAGCGGGCTTCGGCC......................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
........................................................................................................................AACAGCAGAAGCAGCAGCA..................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................GCAACAACAACTGCAGCA............................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CAGCAACAGCGGAAGCAGCAG....................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................ACAACAGCAGCAACAGCAAAAACAAC............................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................AGCAGCAGCAACAGCAGCAACAA........................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGCAGAAGCAGCAGCAACA.................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................CAACCAGTTGGACGTGGGT........................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCACAATGGACCGCTGCGTAGAGCGCGTCGTAGCGTCGTTGGTCGGCCTGCACCCCCTCGACCGATGCCGTTGCAATGTCGCCGACGGGTGTGCGTTCGTCGTCAGCGCTGTCGTTGTCGTTGTCGTCTTCGTCGTCGTTGTCGTCGTTGTTGTTGACGTCGTTGTCGTTTTTGTTGTCGTTGTCGTCGACGTTCTTTTTGTTGTCGATGTTGTCGTCGTCGCTTTCGTTGTATACGCGATACTAGCGGTGCTGCT
**********************************************************...................................(((((((.........................))))).))...************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060684
140x9_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 V116
male body		 GSM1528803
follicle cells		 M027
male body		 SRR060655
9x160_testes_total
 V053
head
 SRR060661
160x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060658
140_ovaries_total
 SRR060679
140x9_testes_total
 SRR060659
Argentina_testes_total
 SRR1106729
mixed whole adult body
 SRR060662
9x160_0-2h_embryos_total
 SRR060660
Argentina_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
 SRR1106727
larvae
..................................................................................................................................................................................................................TTGTCGTCGTGGCATTCGTTGT........................ 22 2 3 1.00 3 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
..........................GTCGTAGCGTCGTTGGTCGGCCTG.............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................CCGGCGGGTGTGCGTTCGTCGTC........................................................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TCGTCGCTTGCGTTGTAT...................... 18 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GCTGCGTTGATCGCGCCGTAG............................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTGTCGTCGTGGCATTCGTTG......................... 21 2 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................GGTCGGCCTGAACCCACTAG.................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTCGTCGTGGCATTCGTTGT........................ 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................TTGGCCGATGGGTGTGCGTTC.............................................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CGTCGTTGTCGTTTTTGT................................................................................. 18 0 14 0.21 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0
.............................................................CCGGTGCTGTTGCAATGTGG............................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................AGCGCTGTCGTTGTCGTCTT.................................................................................................................................... 20 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TGCGCGATACCAGCGGTCCT... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTTTTGTTGTCGATGT............................................. 16 0 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CGCTTTGGTTCTAGACGCGA................ 20 3 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTGTCGTCGGTTTTGTTGACCTCG.............................................................................................. 24 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TGTCGTCGTGGCATTCGTT.......................... 19 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................GGCCGACGCGAGTGCGTTC.............................................................................................................................................................. 19 3 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GTCGTTGTCGTTTTTGTTGT.............................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................TTGTCGTCGTGGCATTCGT........................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................GGTGCCCCTGCACCCCCT...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:4243491-4243746 + dvi_13125 AGT-GTTA--CCTGGCGACGC-----------------------------------------------------------------------------ATCTC---------GCGCAG-----------------------CA-TC---GCAGCAAC---CAGCCGGACGTGGGGGA-------------G---------------------CTGG--------------------------------CTA--C---------------------------------------------------------------------GGCAACGTTACAGCGGCTGCCCACACGCAA---GCAGCAG---------------TCGCGACAGCAA-----------------------CAGCAACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGCAACAGCAGCAACAACAAC-------------------------------------------------T---------------------------GCAGCAACAGCAAAAAC------------------------------AACAGCAACAGCAGCTGCAAGAA------------AAACAACAG-------------------------C---------TACAACAG------------------CAGCAGCGAAAGCAACATATGCGCTATGA----T-----------------C---G-----------------------------------CCA------CGACGA-
droMoj3 scaffold_6473:7208745-7208961 + AAT-CCTA--TCTGGCCACGCATA---------------------------------TA---GCCC-----------------AGCATGTGAAGCAA---C-----------------------------------------------------AGC---CGGT------------------------------------------------------------------------------------------------------------------------------------------------GGTGGACCCAGGCACGGGAATGTCACTGCGGCTGCCGACGCGAAA---GCGACAG---------------AAGCA-----------------------------------------A----------A-------------------------------------------------------AGGGGCAGCAGCAGAGGC---------------------------AACAG-------------------------------------------------CATCAACAGGAACAGC---------------------------AGCTGCGAAAACAACAACAACAACAACA------------------GCAGCAG---------------------C-------------------------------------------------------------------------AGCAACAATCACAATTGCATTACAA----T-----------------G---A-----------------------------------CCG---------CGA-
droGri2 scaffold_15203:3044507-3044751 - CAT-CTCA--ATTGGCCATGCAGC-----------------------------------------------------------------------TGCCAGCC---------ACGCCG-------------------------------TC---GAG---CAGCTCAACGTCGGGCAACTCGCCCGATTTGTTGG---CCTTTCAG---CTAGAAGCGACGCCACTGCAACAGCAA---CAACAGCAG----------------CAACAACAAC------------------------------------------------------------------------------A---GCAGCAA---------------CTGCA-------------------------------------------------------------------CCAGCA---------------------ACAAT---------TGC------------------------------------------AGCAGCAACAACCAGCTGC-ACAGCAAATGCA---------------------------------------------------------CCAGCAACATCATCATC------------------------------AGCAGCAGCAGCAG---------------------CCGCAA----------------------------------------------------------------------------------------CA----------------GTC-GCAACA---G-----------------------------------CCA------CAACAG-
droWil2 scf2_1100000004234:1795-2034 + CTGGC-----GATGGCAATGCTGC-----------------------------------------------------------AGCATC------AGCAACAA--------------------------------------CAATT---GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CAACAATGGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAGCAA---CAACAACA---------------G---------------------C-------------AGCAACAACAACAGCAGCAGCAACA---------------------------AC---------------------------AG---CATC------------AGCAACAGCAACAGCAGCAACA---------------A-------------------------------------------------TGGCAGCAACAACAACAGCAACAACAACTG------CAGCAGCAACAGCAACA---GCAGCAACAATGGC-----------------A---G-----------------------------------CAA------CAACAA-
dp5 XR_group6:8997433-8997685 + AGC-GCTG--C-TGGCGGCC--------------------------------------------TCGGCCGCCGCCGCCCAACAGCACCAGCAGCAA---CGC---------CA-----------------------------G--GTGGCCG---CCGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGTGGCCGCAGCAGCCGCC----CAACAGCAGCAGCAG---------------GTCCACCAGCAC-----------------------C--------------------------------------AGCAACAGCAGCA------------------------GCAACAACAGCAGCAGGTGCACCACCAG------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCAGGCGGCGCACCAGCACCAGCAGC------------AACAG----------------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAACAGCAGCAGCA----ACAGCATGCCGCCGCCGTA---G-----------------------------------CCG------CCT-CG-
droPer2 scaffold_58:316621-316853 + AGT-CGTC--GCACGCC----------------------------------------------AAC-----------------AGC---------AGCAACAT---TAGCACGAATCC-----------------------CAG--CCAGCCG---CCGCCAATTAGCCAGAA-GAT-------------GGTGG---TAAAGCAGCAGCTGGAGGCCAAAATACAG---AAGCAG---------------AAG---------------------------------------------------------------------GCAGCGGCTGCAGCAGCTGCA-----------------------------------------------------------------------------------------------------------------CAACAGCA------------GCAAC---------AGCAA------------------------------CAGCAACAGCAGGCACTGCAAC-------------------------------------------------A---------------------------GCAGCAGCAGCAGGTGC------------------------------AACAGCAACAGCAG---------------------CAACAA-------------------------------------------------------------------------------CAGGTGCAACAGCA----G------------------------------------------------------------------GTGCGC-
droAna3 scaffold_13248:1405143-1405365 + CA-----------GCACGCGCAGC-----------------------------------------------------------------------AACAACAC---------ATCCAC-----------------------AACAT---GC--------------------------------------------------------------------------------AGCAG---------------CAGG-------------------------------------------------------------------------------------------CGCAACAGCAACATCAG---------------CTC---------CTC-CCGCAGCACCAC---------------------------------------------------------------------------TTGCAACAT---CACCTGCAACATCACCACCACCAACAACAACAACAACAGCAGCAGCAACAAC-------------------------------------------------AACAGCAACATC---------------------------AGCTTTTGCCACAACAACAACAACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACAACAACAACAACATCATGA----C-----------------T---T-----------------------------------CCT------CAGC-G-
droBip1 scf7180000396571:133080-133309 - AC---------CTGGCCACGTCGCACCAGATGGTCGCCGCGGGCGGCTCGCCGGTGATGCTTCACC-----------------AGCAA----------------------------------------------------------------------------------------------------------------------------------------------CAGCAA---CAGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAACACCA---------------------GCAA---CACCTGCAACAGCAACATCTCCAA---------------------CAGCAGCAGC-------------------A---------------------ACACCACCAGCAACAAC---------------------------AG---------------------------------------CAGCAACATCAC---------------------CAGCAA----------------CATCATCAG---TTCAACCAGCAACAGCACCACCATCATA---------------------------TGCACCACCA----C-----------------A---C-----------------------------------CCACCATGCACACCAC
droKik1 scf7180000302198:25243-25470 - AGT-GTTG--CCGGGAC----------------------------------------------AAC-----------------AGCAAT------CAAAAC--------------------------------------------A---AC--------------------------------------------------------------------------------AGCAGCAGCAGCAG----------------------------------------------------------GAGCAA------------------------------------------------CATCAG---------------TGG---------CTAGCAAGGGCAAGGCTAGCAAA------------ACCACAGG------C---------------------AGCA---------------------GCAACAGCGACTGTAAGAGCA----------------------------------------------------------GCAATAGCAGCA---------------------------GC---------------------------AGCAAAAGC------------------------------AACAGCAACAGCAGCAGCAGAAACAACAGCAGCAGC-------------------AGCAGCAACAG---------------------------------------CTATAGTAGCAACAACAACAGTACCAGCA----C-----------------C---A-----------------------------------CCA------CGAC-G-
droFic1 scf7180000454105:1738484-1738757 - AGT-A-----TGTGGACACGCCGC-----------------------------------------------------------------------TGCAACAC---------GCGACG-----------------------CGCTC---GCAGCACC---CGGCTGGCCAGCAGGAC-------------A---------------------GCGG--------------------------------CCAGACGACCACCCACCACCTGCTGCTGCTGCCGCAG---------------------------------------------------------------CGCAA---CCAGCAG---------------TTGCA-------------------------------------------------------------------TCAGCA---------------------GCATT---------TACAGCAGCAACAG---------------------CAGCACCTGCAGC-------------------------------------------------------AGCAGCAACACC---------------------------TGCAGCAGCAGCAGCAACATCAGCAACA------------------CCTGCAG---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------TGC-GCGACTGGCGACGACGACGACGCAGGCGACGTCCCTGGGCAGCGACC---ACACCGACGG-
droEle1 scf7180000491249:234922-235155 - GC---------AGTATCAGAAC------------------------------------------------------------------------------------------GGCT--TGTCCGAACTGAGGCAGCAGAAC---AGTTCTCTA---CAGTT-----------------------------GTTGGGCATGTTGCAG------------------------CAGCAG---------------CAGG-------------------------------------------------------------------------------------------CGCAACAGCAACAGCAG---------------CT--------------------------------------------A----------A-AACAGCAGCAACAGCAGCAACAACAGCA---------------------------------------------------GCAACAACAGCAGCAACAACAGCAACAACAAC-------------------------------------------------A---------------------------GCAACAACAACAACAGC------------------------------AGCAACAACAGCAG---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------GCC-GCAACAGGCGCCTAGAA---GG-----------------------TCGCCA----AACGA-
droRho1 scf7180000776850:121938-122171 - CGC-AT--------------------------------------------------------CCCC-----------------AGCATC------TGCAAC-------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CAACACGACGAG-GAGCAACAGCAACTGTTGCAGGAG---------------------------------------------------------------CGCAT---CCAGCAC---------------GAGTA-------------------------------------------------------------------CATGATTCAGCAGCAGCAGCAACATCAGCATT---------TGC------------------------------------------AACAGCAACA----------------------------------------------------------CCAGCATTTGGCCCTCCTGCAGCAGCAGCAACATGAAC------------------------------AGCAGCAACAACAA---------------------CAGCAACATCCGCAACAACA----GCATGGA---G----------------------------------------------T---CA---ACATGGCCA----------------------------------------------------TTGGCA-CGACCA------CAACAA-
droBia1 scf7180000301760:5644824-5645064 + AC---------CTGGCCACGCCGCACCAGATGGTCGCCGCGGGCGGTTCGCCGGTGATGCTCCACC-----------------AGCAG----------------------------------------------------------------------------------------------------------------------------------------------CAGCAG---CAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAGCA---------------------GCAACATCAGCAGCAGCAGCAGCAGCACCAG------------------CAGC----------------------------------------------------------------------------------------AGCAGCAGCACCTGC------------------------------AACAGCAGCAACAC---------------------CACCAAC-------------ACCTTCACCAGCAATTCGGGCAGCAGCAGCAGCAGCAGCACCCCCATCACCACC---------------TGCACCACCA----T-----------------G---C-----------------------------------GCACCACTCGCACCA-
droTak1 scf7180000415872:292092-292332 + AC---------CTGGCCACGCCGCACCAAATGGTCGCCGCGGGCGGTTCGCCGGTGATGCTACACC-----------------AGCAA----------------------------------------------------------------------------------------------------------------------------------------------CAGC----------------------------------------------------------------------------------------------------------------------------AGCAG---------------CAGCA-------------------------------------------------------------------------ACAGCAGCA------------------------GCAACAGCAGCAGCAGCAACACCACCAG------------------CAGC---AGCAGC----A------------ACATC---------------------------T---------------------------GCAACAGCAGCACCTGC------------------------------AACAGCAGCAGCAA---------------------C-------------------ACCACCATCAGCAATTCGGTCAGCAACAGCAGCAGCACCATGGC---CACCACC---------------TGCACCACCA----T-----------------G---C-----------------------------------CCACCACTCGCACCA-
droEug1 scf7180000409711:2448470-2448701 + TCG-CC--------------------------------------------------------CAAC-----------------AGCAGC------AGCAAC-------------------------------------------------------------------------------------------------------------------------------------------AGCAG---CAGCAGGCCGTT-GTC------------------------------------------------------------------------------------CAACAGCAGCAGCAGCAAGTTGTTGCCGCCGCCCAGCAGCAA-----------------------CATCAACAGC----------AACA-------------GGCCCAGCAACAGCA---------------------------------------------------ACAG------------------G-------------------CAGTGGTGCAACAGCAACAGGCGGCTGTGCAACACCAACAGCAACAGC---------------------------AGCAGCAAC------------------------------ATCATCAACAACAG---------------------C-------------------------------------------AACAGCAG---------------------CAGCAACAACAGCAA------CA----------------TGCCGCCGTA---G-----------------------------------CCG--------CCGC-
dm3 chrX:12609044-12609269 - GGC-GGCTCATCTGC------------------------------------------------AGC-----------------AGCAGC------AGCAGCAC---------CAGTCG-----------------------CACCA---AC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CAG------------------------------CAGCAACAGGACCAACGCACCAA----------------------------------------------------------------CCTGCATCTGCAAATCCATCACC------------ACCACCAA------CAGCAGCA------------------------------------------GCAGCAGCAGCAGCAGCA----------------------------------------------------------GCAACAACAACA------------GCAACAGCAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------CAGC---------AAAAACAGCAGCAACATCATATGCAGCAGCAGCAGCAGCAA------------CA----------------A---------------------------------------------------------CCTTTG-
droSim2 3l:3300429-3300693 - AGT-A-----TGTGGACACGCCGC-----------------------------------------------------------------------TGCAACAT---------GCGACG-----------------------CGCTC---GCAGCATC---CGGCTGGCCAGCAGGAT-------------A---------------------ATGG--------------------------------CCAGACGACCACCCACCACCTGTTGCTGCTGCCCCAG---------------------------------------------------------------CGGAA---TCAGCAC---------------CTGCA-------------------------------------------------------------------CCTGCAACAACACCA---------------------------------------------------GCAGCAACAGCAGCACCTGCAGCAGCAGCAAC-------------------------------------------------A---------------------------GCAGCAGCAGCATCTGC------------------------------AGCAGCAGCAACAC---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------TGC-GCGACTGGCGACGACGA---CGCAGGCGACGTCCGTTGGCAGCGACC---ACACCGATGG-
droSec2 scaffold_2:3396671-3396935 - AGT-A-----TGTGGACACGCCGC-----------------------------------------------------------------------TGCAACAT---------GCGACG-----------------------CGCTC---GCAGCATC---CGGCTGGCCAGCAGGAT-------------A---------------------ATGG--------------------------------CCAGACGACCACCCACCACCTGTTGCTGCTGCCCCAG---------------------------------------------------------------CGGAA---TCAGCAC---------------CTGCA-------------------------------------------------------------------CCTGCAACAACACCA---------------------------------------------------GCAGCAACAGCAACACCTGCAGCAGCAACAAC-------------------------------------------------A---------------------------GCAGCAGCAGCATCTGC------------------------------AGCAGCAGCAACAC---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------TGC-GCGACTGGCGACGACGA---CGCAGGCGACGTCCGTTGGAAGCGACC---ACACCGATGG-
droYak3 X:18247229-18247479 + AC---------CTGGCCACGCCGCACCAGATGGTCGCCGCGGGCGGTTCGCCGGTGATGCTCCACC-----------------AGCAG----------------------------------------------------------------------------------------------------------------------------------------------CAGCAG---CATCAG----------------------------------CAGCAACAACAGCAGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------CATCAACAGC----------AGCA-GCAG------------CAGCAA------------C------------------AGCAGCA----------------------------------------------------------TCATCAGCAGCAACAGCAACA------------ACACCACCAGCAACAGC---------------------------AG---------------------------------------------CAGCAG---------------------C-------------------ATCATCATCAGCAATTTGGCCAGCAGCAGCATC---CACATGCC---CATCACC---------------TGCACCACCA----T-----------------G---C-----------------------------------CCA--------CCAC-
droEre2 scaffold_4690:1183989-1184224 - CGC-AC-----CAG---TCGC-----------------------------------------------------------------ATC------AGCAGCAGCAGCCGCACCAGTCG-----------------------CATCA---GC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CTGCTTCAGCAGCAGCAACTTCAGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------CTTCAGCAGC--AGCATCAG------CAGCAGCT------------------------------------------GCAGCATCAACAGCAGCT----------------------------------------------------------GCAACATCAACA------------GCAGCTGC------------------------------------AG---------------------------------------CATCAACAGCAGCTG------------------C-------------------AGCATCAACACCAACTG---------------------------------CAGCAGCAGCAGCATCA---GCAGCA----------------GCT-GCAGCA---T-----------------------------------CAG------CATCAC-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AGT-GTTA--CCTGGCGACGC-----------------------------------------------------------------------------ATCTC---------GCGCAG-----------------------CA-TC---GCAGCAAC---CAGCCGGACGTGGGGGA-------------G---------------------CTGG--------------------------------CTA--C---------------------------------------------------------------------GGCAACGTTACAGCGGCTGCCCACACGCAA---GCAGCAG---------------TCGCGACAGCAA-----------------------CAGCAACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGCAACAGCAGCAACAACAAC-------------------------------------------------T---------------------------GCAGCAACAGCAAAAAC------------------------------AACAGCAACAGCAGCTGCAAGAA------------AAACAACAG-------------------------C---------TACAACAG------------------CAGCAGCGAAAGCAACATATGCGCTATGA----T-----------------C---G-----------------------------------CCA------CGACGA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................CTC---------GCGCAG-----------------------CA-TC---GCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCTGCAAGAA------------A................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AAC---CAGCCGGACGTGGGGGA-------------G---------------------CTGG--------------------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCTGCAAGAA------------AAACAAC..........................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................A-TC---GCAGCAAC---CAGCCGGACGTGGGGGA-------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AC---CAGCCGGACGTGGGGGA-------------G---------------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGCAACA..............................................................................................................................................................................................................................................................................................................................................................2260.171001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGC..................................................................................................................................................................................................................................................................................................................................................................20130.152000000000000010000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC-------------------------------------------------T---------------------------GCAGCAACAGCAA......................................................................................................................................................................................................................................................2170.141000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CAA-----------------------CAGCAACAGCAG----------A-AGCAG------------------------------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGCAACAG.............................................................................................................................................................................................................................................................................................................................................................2090.111001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CA....................................................................................................................................................................................................................................................................................................................................................................20100.101000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CAG...................................................................................................................................................................................................................................................................................................................................................................20110.091000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CA....................................................................................................................................................................................................................................................................................................................................................................19130.081000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC-------------------------------------------------T---------------------------GCAGCAACA..........................................................................................................................................................................................................................................................19180.061000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------------------------------------------CAGCAACAGCAGCAACAACA..................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------------------------------------------------------------------------CAGCAACAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGCAACAT.............................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAAC-------------------------------------------------T---------------------------GCAGCA.............................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------------------------------------------------------------------------------------CAGCAACAGCAGCAACAA....................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG----------A-AGCAG------------------------------------------------------------------------------------CAGCAACA..............................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000001000000000000000000000000000000000000
droMoj3
AAT-CCTA--TCTGGCCACGCATA---------------------------------TA---GCCC-----------------AGCATGTGAAGCAA---C-----------------------------------------------------AGC---CGGT------------------------------------------------------------------------------------------------------------------------------------------------GGTGGACCCAGGCACGGGAATGTCACTGCGGCTGCCGACGCGAAA---GCGACAG---------------AAGCA-----------------------------------------A----------A-------------------------------------------------------AGGGGCAGCAGCAGAGGC---------------------------AACAG-------------------------------------------------CATCAACAGGAACAGC---------------------------AGCTGCGAAAACAACAACAACAACAACA------------------GCAGCAG---------------------C-------------------------------------------------------------------------AGCAACAATCACAATTGCATTACAA----T-----------------G---A-----------------------------------CCG---------CGA-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---------------------C-------------------------------------------------------------------------AGCAACAATCACA..........................................................................................2030.331010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------GCAGCAG---------------------C-------------------------------------------------------------------------AGCAACA................................................................................................22200.051000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA------------------GCAGCAG---------------------C-------------------------------------------------------------------------AGCAACA................................................................................................25200.051000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACA------------------GCAGCAG---------------------C-------------------------------------------------------------------------AGCA...................................................................................................26200.051100000
droGri2
CAT-CTCA--ATTGGCCATGCAGC-----------------------------------------------------------------------TGCCAGCC---------ACGCCG-------------------------------TC---GAG---CAGCTCAACGTCGGGCAACTCGCCCGATTTGTTGG---CCTTTCAG---CTAGAAGCGACGCCACTGCAACAGCAA---CAACAGCAG----------------CAACAACAAC------------------------------------------------------------------------------A---GCAGCAA---------------CTGCA-------------------------------------------------------------------CCAGCA---------------------ACAAT---------TGC------------------------------------------AGCAGCAACAACCAGCTGC-ACAGCAAATGCA---------------------------------------------------------CCAGCAACATCATCATC------------------------------AGCAGCAGCAGCAG---------------------CCGCAA----------------------------------------------------------------------------------------CA----------------GTC-GCAACA---G-----------------------------------CCA------CAACAG-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................ACAGCAG----------------CAACAACAAC------------------------------------------------------------------------------A---GCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10220
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAG---------------------CCGCAA----------------------------------------------------------------------------------------...................................................................................19200.05110
..................................................................................................................................................................................................................................................CAGCAG----------------CAACAACAAC------------------------------------------------------------------------------A---GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
droWil2
CTGGC-----GATGGCAATGCTGC-----------------------------------------------------------AGCATC------AGCAACAA--------------------------------------CAATT---GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CAACAATGGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAGCAA---CAACAACA---------------G---------------------C-------------AGCAACAACAACAGCAGCAGCAACA---------------------------AC---------------------------AG---CATC------------AGCAACAGCAACAGCAGCAACA---------------A-------------------------------------------------TGGCAGCAACAACAACAGCAACAACAACTG------CAGCAGCAACAGCAACA---GCAGCAACAATGGC-----------------A---G-----------------------------------CAA------CAACAA-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------A-------------------------------------------------TGGCAGCAACAACAACAG.............................................................................................................................23200.7014014000
.........................................................................................................................................................................................................................................................................AACAATGGCAGCAACAACAA---------------------------------------------------------------CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.7014014000
.....................................................................................................................................................................................................................................................................................AACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTG................................................................................................................................................................................................................................................................................................................................................................................................................23200.20404000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAACAACTG------...........................................................................................................23200.20404000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC------------AGCAACAGCAACAGCAGCAACA---------------A-------------------------------------------------T..............................................................................................................................................2660.17101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA---------------G---------------------C-------------AGCAACAACA..................................................................................................................................................................................................................................................................................................................................18200.15300030
.....................................................................................................AA--------------------------------------CAATT---GCAGCAAC--------------------------------------------------------------------------AACAG---CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15301020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAACAACA---------------G---------------------C-------------AGCAACA.....................................................................................................................................................................................................................................................................................................................................20200.15300030
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------A-------------------------------------------------TGGCAGCAACAACAACAGC............................................................................................................................24200.15302010
.........................................................................................................................................................................................................................................................................AACAATGGCAGCAACAACAA---------------------------------------------------------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15302010
........................................................................................................................................................................................................................................................................CAACAATGGCAGCAACAACAA---------------------------------------------------------------CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10201010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA---GCAGCAACAATGG..........................................................................23200.10202000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA---GCAGCAACAATGGC-----------------........................................................24200.10202000
..................................................................................................................................................................................................................................................................................AGCAACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTG................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
.................................................................................................................................................T---GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------A-------------------------------------------------TGGCAGCAACAACAACAG.............................................................................................................................24200.10201010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGCAAC....................................................................................................................................................................................................................................................................................................................22200.10200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC------------AGCAACAGCAACAGCAGCAACA---------------.................................................................................................................................................................................................24100.10100010
.......................................................................................................................................................................................................................................AACAG---CAACAGCAG----------------CAACAATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
.......................................................................................................................................................................................................................................AACAG---CAACAGCAG----------------CAACAATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGCAACAACAACTG------...........................................................................................................26200.10202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAACA---------------A-------------------------------------------------TGG............................................................................................................................................23200.10202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAACA---------------A-------------------------------------------------TGGC...........................................................................................................................................24200.10202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA---GCAGCAACA..............................................................................18200.10200020
..........................................................................................................................................................AAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------------------AC---------------------------AG---CATC------------AGCAACAGCAACAG........................................................................................................................................................................................................................27120.08101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------AC---------------------------AG---CATC------------AGCAACAGCAACAGCAG.....................................................................................................................................................................................................................27120.08100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAACA---------------------------AC---------------------------AG---CATC------------AG....................................................................................................................................................................................................................................27120.08100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------------------AC---------------------------AG---CATC------------AGCAACAGC.............................................................................................................................................................................................................................22140.07100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------------------AC---------------------------AG---CATC------------AGCAACAGC.............................................................................................................................................................................................................................19170.06100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CATC------------AGCAACAGCAACAGCAG.....................................................................................................................................................................................................................23170.06101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC------------AGCAACAGCAACAGCAGCAAC.................................................................................................................................................................................................................24190.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---------------G---------------------C-------------AGCAACAACAAC................................................................................................................................................................................................................................................................................................................................21200.05100010
....................................................................................................CAA--------------------------------------CAATT---GCAGCAAC--------------------------------------------------------------------------AACAG---CAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...............................................................................................................................................................................................................................................................................GGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
......................................................................................................................................................................................................................................................AG----------------CAACAATGGCAGCAACAACAA---------------------------------------------------------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA---------------A-------------------------------------------------TGGCAGCAACAACA.................................................................................................................................25200.05101000
.........................................................................................................................................................................................................................................................................AACAATGGCAGCAACAACAA---------------------------------------------------------------CAGCA---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAGCAA.....................................................................................................................................................................................................................................................................................................................20200.05100100
..........................................................................................................................................................................................................................................................................ACAATGGCAGCAACAACAA---------------------------------------------------------------CAGCA---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------G---------------------C-------------AGCAACAACAACAGCAGCAGCAA.....................................................................................................................................................................................................................................................................................................................26200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAACTG------CAG........................................................................................................23200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACA---------------A-------------------------------------------------TGG............................................................................................................................................20200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAACAACAACAGCAAC.........................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------A-------------------------------------------------TGGCAGCAACAACAACAGCA...........................................................................................................................22200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---CAACAACA---------------G---------------------C-------------AGCAACAA....................................................................................................................................................................................................................................................................................................................................23200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACTG------CAGCAGCAA..................................................................................................23200.05101000
.....................................................................................................................................................GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACAACAGCAACAACAA....................................................................................................................27200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------G---------------------C-------------AGCAACAACAACAGCAG...........................................................................................................................................................................................................................................................................................................................22200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA---GCAGCAACAATGGC-----------------........................................................25200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACTG------CAGCAGC....................................................................................................24200.05101000
.......................................................................................................................................................AGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------A-------------------------------------------------TGGCAGCAACAACAACAGCAACAAC......................................................................................................................27200.05101000
...........................................................................................................................................................AC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CAACAATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..........................................................................................................................................................AAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CAACAATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACTG------CAGCAGCAACA................................................................................................25200.05100010
................................................................................................................................................TT---GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------A-------------------------------------------------TGGCAGCAACAACAACAG.............................................................................................................................22200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACA---------------------------AC---------------------------AG---CA....................................................................................................................................................................................................................................................22200.05101000
........................................................................................................................................................................................................................................................................CAACAATGGCAGCAACAACAA---------------------------------------------------------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..............................................................................................................................................................................................................................................................................TGGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------C..................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.................................................................................................................................................T---GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAACTG------CAGCA......................................................................................................21200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA---------------G---------------------C-------------AGCAACAACAACA...............................................................................................................................................................................................................................................................................................................................23200.05100001
..............................................................................................................................................................................................................................................................................TGGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA---GCAGCAAC...............................................................................19200.05100010
.....................................................................................................................................................................................................................................................................................AACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
............................................................................................................................................................................................................................................................................................A---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
........................................................................................................................................................................................................................................................................................AACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCAGCAACA---------------------------........................................................................................................................................................................................................................................................................................24200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACTG------CAGCAGCAACA................................................................................................22200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------A-------------------------------------------------TGGCAGCAACAACAACAGC............................................................................................................................25200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------A-------------------------------------------------TGGCAGCAACAACAACAGCA...........................................................................................................................24200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACA---------------------------AC---------------------------A..........................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAACAATGGC-----------------A---G-----------------------------------CAA------CAACA..25200.05101000
..............................................................................................................................................................................................................................................................................TGGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
................................................................................................................................................TT---GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACA---------------------------A.......................................................................................................................................................................................................................................................................................19200.05100010
...................................................................................................................................................................................................................................................AGCAG----------------CAACAATGGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC------------AGCAACAGCAACAGCAGC....................................................................................................................................................................................................................21200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAACAACA---------------G---------------------C-------------AGCAACAACAACAG..............................................................................................................................................................................................................................................................................................................................26200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------G---------------------C-------------AGCAACAACAACAGC.............................................................................................................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAACTG------CAGCA......................................................................................................25200.05100010
............................................................................................................................................................................................................................................................................AATGGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................................................................................................................................AACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGC...............................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................................................................................CAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
........................................................................................................................................................................................................................................................................................AACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAACAACAACAGCAACAA.......................................................................................................................23200.05101000
............................................................................................................................................................................................................................................................................AATGGCAGCAACAACAA---------------------------------------------------------------CAGCA---ACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..........................................................................................................................................................................................................................................AG---CAACAGCAG----------------CAACAATGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAACA---------------------------AC---------------------------AG---......................................................................................................................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGCAACA---------------------------........................................................................................................................................................................................................................................................................................23200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAACAACA---------------G---------------------C-------------AGCAACAACAACA...............................................................................................................................................................................................................................................................................................................................26200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGCAGCAGCAACA---------------------------........................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------C-------------AGCAACAACAACAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................24200.05100010
............................................................................................................................................................C--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CAACAATGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..................................................................................................................................................................................................................................................................................AGCAACAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
.......................................................................................................................................................................................................................................................................................CAACAA---------------------------------------------------------------CAGCA---ACAACAA----------------------------------------------------------------------------------------------------------------------CTGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACTG------CAGCAGCAAC.................................................................................................27200.05101000
.......................................................................................................................................................AGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACTG------CAG........................................................................................................21200.05101000
............................................................................................................................................................................................................................................................................AATGGCAGCAACAACAA---------------------------------------------------------------CAGCA---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAGCAACA---------------A-------------------------------------------------TGGC...........................................................................................................................................25200.05101000
.....................................................................................................AA--------------------------------------CAATT---GCAGCAAC--------------------------------------------------------------------------AACAG---CAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................ACAATGGCAGCAACAACAA---------------------------------------------------------------CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA---GCAGCAACAATGG..........................................................................20200.05101000
.....................................................................................................AA--------------------------------------CAATT---GCAGCAAC--------------------------------------------------------------------------AACAG---C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------A-------------------------------------------------TGGCAGCAACAACAACAGC............................................................................................................................21200.05101000
...........................................................................................................................................................AC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
...............................................................................................................................................................................................................................................................................GGCAGCAACAACAA---------------------------------------------------------------CAGCA---AC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------G---------------------C-------------AGCAACAACAACAGCA............................................................................................................................................................................................................................................................................................................................22200.05100001
.....................................................................................................................................................GCAGCAAC--------------------------------------------------------------------------AACAG---CAACAGCAG----------------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------A-------------------------------------------------TGGCAGCAACAACAACAGCA...........................................................................................................................25200.05100010
dp5
AGC-GCTG--C-TGGCGGCC--------------------------------------------TCGGCCGCCGCCGCCCAACAGCACCAGCAGCAA---CGC---------CA-----------------------------G--GTGGCCG---CCGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGTGGCCGCAGCAGCCGCC----CAACAGCAGCAGCAG---------------GTCCACCAGCAC-----------------------C--------------------------------------AGCAACAGCAGCA------------------------GCAACAACAGCAGCAGGTGCACCACCAG------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCAGGCGGCGCACCAGCACCAGCAGC------------AACAG----------------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAACAGCAGCAGCA----ACAGCATGCCGCCGCCGTA---G-----------------------------------CCG------CCT-CG-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................CGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGTGGCCGCAGCAGCCGCC----C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010000
.GC-GCTG--C-TGGCGGCC--------------------------------------------TCGGCCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCAGGCGGCGC...............................................................................................................................................................................................................................................2011.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCACCAG------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCAGGC....................................................................................................................................................................................................................................................2350.2010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACCAG------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCAG......................................................................................................................................................................................................................................................20200.1020000000200
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------AACAG----------------------------------------------------------------------------------------------------CAGCAGCAGCAACA.............................................................................................20200.1020000200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCAGC...............................................................................20200.1020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAGCAGCA----AC........................................................................20200.1020010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGCA----ACA.......................................................................23200.1020100100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCA----ACAGC.....................................................................21200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACAGCAGCAGC...............................................................................23200.0510010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------------------------------------------------------------------------------------------CAGCAGCAGCAACAACAACAGCAGC..................................................................................27200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA------------------------GCAACAACAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................23200.0510000010000
...................................................................................................................................................................................................................................................................................................................................................................................................CAC-----------------------C--------------------------------------AGCAACAGCAGCA------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------AACAG----------------------------------------------------------------------------------------------------CAGCAGCAGCA................................................................................................19200.0510000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCACCAG------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCAG......................................................................................................................................................................................................................................................22200.0510000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAGCA----..........................................................................19200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAACAACAGC.....................................................................................20200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAACAACAGCAG...................................................................................21200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCA------------------------GCAACAACAG.................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA------------------------GCAACAACAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA------------------------GCAACAACAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAG................................................................................18200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCACCAG------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCA.......................................................................................................................................................................................................................................................21200.0510000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCA----ACAG......................................................................21200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAACAACA.......................................................................................20200.0510000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAGCA....................................................................................19200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAG------------------CAGC---A-------------------------------------------------------------GC---------------------------AGCAG......................................................................................................................................................................................................................................................19200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCA------------------------GCAACAACAGC................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
droPer2
AGT-CGTC--GCACGCC----------------------------------------------AAC-----------------AGC---------AGCAACAT---TAGCACGAATCC-----------------------CAG--CCAGCCG---CCGCCAATTAGCCAGAA-GAT-------------GGTGG---TAAAGCAGCAGCTGGAGGCCAAAATACAG---AAGCAG---------------AAG---------------------------------------------------------------------GCAGCGGCTGCAGCAGCTGCA-----------------------------------------------------------------------------------------------------------------CAACAGCA------------GCAAC---------AGCAA------------------------------CAGCAACAGCAGGCACTGCAAC-------------------------------------------------A---------------------------GCAGCAGCAGCAGGTGC------------------------------AACAGCAACAGCAG---------------------CAACAA-------------------------------------------------------------------------------CAGGTGCAACAGCA----G------------------------------------------------------------------GTGCGC-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................GGCCAAAATACAG---AAGCAG---------------AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droAna3
CA-----------GCACGCGCAGC-----------------------------------------------------------------------AACAACAC---------ATCCAC-----------------------AACAT---GC--------------------------------------------------------------------------------AGCAG---------------CAGG-------------------------------------------------------------------------------------------CGCAACAGCAACATCAG---------------CTC---------CTC-CCGCAGCACCAC---------------------------------------------------------------------------TTGCAACAT---CACCTGCAACATCACCACCACCAACAACAACAACAACAGCAGCAGCAACAAC-------------------------------------------------AACAGCAACATC---------------------------AGCTTTTGCCACAACAACAACAACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACAACAACAACAACATCATGA----C-----------------T---T-----------------------------------CCT------CAGC-G-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................21200.153030000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACA................................................................................................2580.131000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................22200.102000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACAACAAC...........................................................................................21200.102020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................19200.102020000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAAC.................................................................................................23100.101010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAAC-------------------------------------------------AACAGCAAC.........................................................................................................................................................................................................................................................................................25100.101010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAAC-------------------------------------------------AAC...............................................................................................................................................................................................................................................................................................21200.102020000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACAACAACA..........................................................................................25140.071010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGC.......................................................................................................21140.071010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAAC-------------------------------------------------AACAGC............................................................................................................................................................................................................................................................................................24160.061010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCA------------------ACAG----------------------------------------------------------------------------------------------C..........................................................................................................19200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAAC.................................................................................................21200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................19200.051001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGC....................................................................................................20200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAACAAC-------------------------------------------------AACA..............................................................................................................................................................................................................................................................................................23200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAAC-------------------------------------------------AAC...............................................................................................................................................................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................23200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAAC-------------------------------------------------AACAGC............................................................................................................................................................................................................................................................................................20200.051000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAAC-------------------------------------------------AACAGC............................................................................................................................................................................................................................................................................................21200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................18200.051000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACA................................................................................................22200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................23200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................20200.051000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACATCA.................................................................................19200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG----------------------------------------------------------------------------------------------CAGCAGCAACAACAAC...........................................................................................20200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................24200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAACAACAACAAC.....................................................................................22200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACAACA.............................................................................................19200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................21200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAGCAA.......................................................................................................................................................................................................................................................................................................................................................20200.051000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................21200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAACAACAACA..........................................................................................23200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG----------------------------------------------------------------------------------------------CAGCAGCAACAACAACAACA.......................................................................................23200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA------------------ACAG----------------------------------------------------------------------------------------------CAGCAGCAAC.................................................................................................20200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAAC-------------------------------------------------AACAGCA...........................................................................................................................................................................................................................................................................................18200.051010000
droBip1
AC---------CTGGCCACGTCGCACCAGATGGTCGCCGCGGGCGGCTCGCCGGTGATGCTTCACC-----------------AGCAA----------------------------------------------------------------------------------------------------------------------------------------------CAGCAA---CAGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAACACCA---------------------GCAA---CACCTGCAACAGCAACATCTCCAA---------------------CAGCAGCAGC-------------------A---------------------ACACCACCAGCAACAAC---------------------------AG---------------------------------------CAGCAACATCAC---------------------CAGCAA----------------CATCATCAG---TTCAACCAGCAACAGCACCACCATCATA---------------------------TGCACCACCA----C-----------------A---C-----------------------------------CCACCATGCACACCACSizeHit CountTotal NormTotal
No Reads
droKik1
AGT-GTTG--CCGGGAC----------------------------------------------AAC-----------------AGCAAT------CAAAAC--------------------------------------------A---AC--------------------------------------------------------------------------------AGCAGCAGCAGCAG----------------------------------------------------------GAGCAA------------------------------------------------CATCAG---------------TGG---------CTAGCAAGGGCAAGGCTAGCAAA------------ACCACAGG------C---------------------AGCA---------------------GCAACAGCGACTGTAAGAGCA----------------------------------------------------------GCAATAGCAGCA---------------------------GC---------------------------AGCAAAAGC------------------------------AACAGCAACAGCAGCAGCAGAAACAACAGCAGCAGC-------------------AGCAGCAACAG---------------------------------------CTATAGTAGCAACAACAACAGTACCAGCA----C-----------------C---A-----------------------------------CCA------CGAC-G-SizeHit CountTotal NormTotal
No Reads
droFic1
AGT-A-----TGTGGACACGCCGC-----------------------------------------------------------------------TGCAACAC---------GCGACG-----------------------CGCTC---GCAGCACC---CGGCTGGCCAGCAGGAC-------------A---------------------GCGG--------------------------------CCAGACGACCACCCACCACCTGCTGCTGCTGCCGCAG---------------------------------------------------------------CGCAA---CCAGCAG---------------TTGCA-------------------------------------------------------------------TCAGCA---------------------GCATT---------TACAGCAGCAACAG---------------------CAGCACCTGCAGC-------------------------------------------------------AGCAGCAACACC---------------------------TGCAGCAGCAGCAGCAACATCAGCAACA------------------CCTGCAG---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------TGC-GCGACTGGCGACGACGACGACGCAGGCGACGTCCCTGGGCAGCGACC---ACACCGACGG-SizeHit CountTotal NormTotal
No Reads
droEle1
GC---------AGTATCAGAAC------------------------------------------------------------------------------------------GGCT--TGTCCGAACTGAGGCAGCAGAAC---AGTTCTCTA---CAGTT-----------------------------GTTGGGCATGTTGCAG------------------------CAGCAG---------------CAGG-------------------------------------------------------------------------------------------CGCAACAGCAACAGCAG---------------CT--------------------------------------------A----------A-AACAGCAGCAACAGCAGCAACAACAGCA---------------------------------------------------GCAACAACAGCAGCAACAACAGCAACAACAAC-------------------------------------------------A---------------------------GCAACAACAACAACAGC------------------------------AGCAACAACAGCAG---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------GCC-GCAACAGGCGCCTAGAA---GG-----------------------TCGCCA----AACGA-SizeHit CountTotal NormTotal
No Reads
droRho1
CGC-AT--------------------------------------------------------CCCC-----------------AGCATC------TGCAAC-------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CAACACGACGAG-GAGCAACAGCAACTGTTGCAGGAG---------------------------------------------------------------CGCAT---CCAGCAC---------------GAGTA-------------------------------------------------------------------CATGATTCAGCAGCAGCAGCAACATCAGCATT---------TGC------------------------------------------AACAGCAACA----------------------------------------------------------CCAGCATTTGGCCCTCCTGCAGCAGCAGCAACATGAAC------------------------------AGCAGCAACAACAA---------------------CAGCAACATCCGCAACAACA----GCATGGA---G----------------------------------------------T---CA---ACATGGCCA----------------------------------------------------TTGGCA-CGACCA------CAACAA-SizeHit CountTotal NormTotal
No Reads
droBia1
AC---------CTGGCCACGCCGCACCAGATGGTCGCCGCGGGCGGTTCGCCGGTGATGCTCCACC-----------------AGCAG----------------------------------------------------------------------------------------------------------------------------------------------CAGCAG---CAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCAACAGCA---------------------GCAACATCAGCAGCAGCAGCAGCAGCACCAG------------------CAGC----------------------------------------------------------------------------------------AGCAGCAGCACCTGC------------------------------AACAGCAGCAACAC---------------------CACCAAC-------------ACCTTCACCAGCAATTCGGGCAGCAGCAGCAGCAGCAGCACCCCCATCACCACC---------------TGCACCACCA----T-----------------G---C-----------------------------------GCACCACTCGCACCA-SizeHit CountTotal NormTotal
No Reads
droTak1
AC---------CTGGCCACGCCGCACCAAATGGTCGCCGCGGGCGGTTCGCCGGTGATGCTACACC-----------------AGCAA----------------------------------------------------------------------------------------------------------------------------------------------CAGC----------------------------------------------------------------------------------------------------------------------------AGCAG---------------CAGCA-------------------------------------------------------------------------ACAGCAGCA------------------------GCAACAGCAGCAGCAGCAACACCACCAG------------------CAGC---AGCAGC----A------------ACATC---------------------------T---------------------------GCAACAGCAGCACCTGC------------------------------AACAGCAGCAGCAA---------------------C-------------------ACCACCATCAGCAATTCGGTCAGCAACAGCAGCAGCACCATGGC---CACCACC---------------TGCACCACCA----T-----------------G---C-----------------------------------CCACCACTCGCACCA-SizeHit CountTotal NormTotal
No Reads
droEug1
TCG-CC--------------------------------------------------------CAAC-----------------AGCAGC------AGCAAC-------------------------------------------------------------------------------------------------------------------------------------------AGCAG---CAGCAGGCCGTT-GTC------------------------------------------------------------------------------------CAACAGCAGCAGCAGCAAGTTGTTGCCGCCGCCCAGCAGCAA-----------------------CATCAACAGC----------AACA-------------GGCCCAGCAACAGCA---------------------------------------------------ACAG------------------G-------------------CAGTGGTGCAACAGCAACAGGCGGCTGTGCAACACCAACAGCAACAGC---------------------------AGCAGCAAC------------------------------ATCATCAACAACAG---------------------C-------------------------------------------AACAGCAG---------------------CAGCAACAACAGCAA------CA----------------TGCCGCCGTA---G-----------------------------------CCG--------CCGC-SizeHit CountTotal NormTotal
No Reads
dm3
GGC-GGCTCATCTGC------------------------------------------------AGC-----------------AGCAGC------AGCAGCAC---------CAGTCG-----------------------CACCA---AC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CAG------------------------------CAGCAACAGGACCAACGCACCAA----------------------------------------------------------------CCTGCATCTGCAAATCCATCACC------------ACCACCAA------CAGCAGCA------------------------------------------GCAGCAGCAGCAGCAGCA----------------------------------------------------------GCAACAACAACA------------GCAACAGCAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------CAGC---------AAAAACAGCAGCAACATCATATGCAGCAGCAGCAGCAGCAA------------CA----------------A---------------------------------------------------------CCTTTG-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................GCAACAGGACCAACGCACCAA----------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TGCATCTGCAAATCCATCACC------------AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GCAACAGGACCAACGCACCAA----------------------------------------------------------------CCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................CCAA------CAGCAGCA------------------------------------------GCAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................26190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAA------CAGCAGCA------------------------------------------GCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------GCAACAGCAGCAA..........................................................................................................................................................................................................................................................................................20190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAA------CAGCAGCA------------------------------------------GCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA------------------------------------------GCAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGCAGCA------------------------------------------GCAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------------------------------------------GCAGCAGCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CCAA------CAGCAGCA------------------------------------------GCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------CAGC---------A.......................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CAGCAG-------------------------CAG------------------------------CAGCAACAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................ACCA---AC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CAG------------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------GCAACAGCAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------C....................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAA------CAGCAGCA------------------------------------------GCAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA------------GCAACAGCAG.............................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CCA---AC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CAG------------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA----------------------------------------------------------GCAACAACAACA------------GCA....................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCAACAGCAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------C....................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACCAA------CAGCAGCA------------------------------------------GCA........................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACA------------GCAACAGCA..............................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA----------------------------------------------------------GCAACAACAACA------------.......................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAA------------C..................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------------------GCAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------------------GCAGCAGCAGCAGCAGCA----------------------------------------------------------GCA............................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------CAGC---------........................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGCAGCA------------------------------------------GCAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAA------------CA----------------A---------------------------------------------------------C......20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------CAGC---------........................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------GCAACAGCAGCAACAG.......................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CAG---CAGCAG-------------------------CAG------------------------------CAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................C--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CAG------------------------------CAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................A---AC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CAG------------------------------CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA----------------------------------------------------------GCAACAA........................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACA------------GCAACAGC...............................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------------GCAACAACAACA------------GCAA...................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA----------------------------------------------------------GCAACAACAAC....................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAGCAGCA------------------------------------------GCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC---------------------------AG---------------------------------------------------CAG----------------------------------------------CAGC---------A.......................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGT-A-----TGTGGACACGCCGC-----------------------------------------------------------------------TGCAACAT---------GCGACG-----------------------CGCTC---GCAGCATC---CGGCTGGCCAGCAGGAT-------------A---------------------ATGG--------------------------------CCAGACGACCACCCACCACCTGTTGCTGCTGCCCCAG---------------------------------------------------------------CGGAA---TCAGCAC---------------CTGCA-------------------------------------------------------------------CCTGCAACAACACCA---------------------------------------------------GCAGCAACAGCAGCACCTGCAGCAGCAGCAAC-------------------------------------------------A---------------------------GCAGCAGCAGCATCTGC------------------------------AGCAGCAGCAACAC---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------TGC-GCGACTGGCGACGACGA---CGCAGGCGACGTCCGTTGGCAGCGACC---ACACCGATGG-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAC---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------TGC-GCGACTGGCGAC.................................................2811.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-GCGACTGGCGACGACGA---CGC......................................2311.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAC---------------------CAGCAA----------------------------------------------------------------------------------------...................................................................................18190.7414000001400000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCACCTGCAGCAGCAG....................................................................................................................................................................................................................................................................................................................................................2120.50100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAC-------------------------------------------------A---------------------------GCAGCAGCAGCAT......................................................................................................................................................................................................................................................21140.07100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACACCA---------------------------------------------------GCAGCA..........................................................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
droSec2
AGT-A-----TGTGGACACGCCGC-----------------------------------------------------------------------TGCAACAT---------GCGACG-----------------------CGCTC---GCAGCATC---CGGCTGGCCAGCAGGAT-------------A---------------------ATGG--------------------------------CCAGACGACCACCCACCACCTGTTGCTGCTGCCCCAG---------------------------------------------------------------CGGAA---TCAGCAC---------------CTGCA-------------------------------------------------------------------CCTGCAACAACACCA---------------------------------------------------GCAGCAACAGCAACACCTGCAGCAGCAACAAC-------------------------------------------------A---------------------------GCAGCAGCAGCATCTGC------------------------------AGCAGCAGCAACAC---------------------CAGCAA----------------------------------------------------------------------------------------CA----------------TGC-GCGACTGGCGACGACGA---CGCAGGCGACGTCCGTTGGAAGCGACC---ACACCGATGG-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACGTCCGTTGGAAGC..................1813.0030030
...........................................................................................................................................................................................................................................................................CTGTTGCTGCTGCCCCAG---------------------------------------------------------------CGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-GCGACTGGCGACGAC..............................................1811.0011000
.......................C-----------------------------------------------------------------------TGCAACAT---------GCGACG-----------------------CGCTC---GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
..................................................................................................................GACG-----------------------CGCTC---GCAGCATC---CGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
........................................................................................................................................................................CAGCAGGAT-------------A---------------------ATGG--------------------------------CCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGA---CGCAGGCGACGT.............................2011.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACGTCCGTTGGAAGCGACC---...........2311.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAACAACACCA---------------------------------------------------GCAGCAAC........................................................................................................................................................................................................................................................................................................................................................................2211.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCCGTTGGAAGCGAC...............1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA---CGCAGGCGACGTCCGTTGGAAGC..................2611.0010010
......................................................................................................................................................................GCCAGCAGGAT-------------A---------------------ATGG--------------------------------CCAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..................................................................................................................GACG-----------------------CGCTC---GCAGCATC---CGGCTGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAAC-------------------------------------------------A---------------------------GCAGCAGCAGC........................................................................................................................................................................................................................................................20200.1020020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC-------------------------------------------------A---------------------------GCAGCAGCAGCA.......................................................................................................................................................................................................................................................19200.0510010
droYak3
AC---------CTGGCCACGCCGCACCAGATGGTCGCCGCGGGCGGTTCGCCGGTGATGCTCCACC-----------------AGCAG----------------------------------------------------------------------------------------------------------------------------------------------CAGCAG---CATCAG----------------------------------CAGCAACAACAGCAGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------CATCAACAGC----------AGCA-GCAG------------CAGCAA------------C------------------AGCAGCA----------------------------------------------------------TCATCAGCAGCAACAGCAACA------------ACACCACCAGCAACAGC---------------------------AG---------------------------------------------CAGCAG---------------------C-------------------ATCATCATCAGCAATTTGGCCAGCAGCAGCATC---CACATGCC---CATCACC---------------TGCACCACCA----T-----------------G---C-----------------------------------CCA--------CCAC-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC----------AGCA-GCAG------------CAGCAA------------C------------------.........................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA-GCAG------------CAGCAA------------C------------------AGCAGCA----------------------------------------------------------T.......................................................................................................................................................................................................................................................................................................................................23100.10100000010000
...............................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------AG---------------------------------------------CAGCAG---------------------C-------------------ATCATCATC....................................................................................................................................................21110.09101000000000
...........................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28110.09101000000000
............................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.08101000000000
..............................................................................................................................................................................................................................................................................................................GCAGCAA--------------------------------------------------------------------------------------------------------CATCAACAGC----------AGCA-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.06101000000000
..................................................................................................................................................................................................................................................................................................................CAA--------------------------------------------------------------------------------------------------------CATCAACAGC----------AGCA-GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.06100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAACAGC---------------------------AG---------------------------------------------CAGCAG---------------------C-------------------.............................................................................................................................................................21190.05101000000000
....................................................................................................................................................................................................................................................G----------------------------------CAGCAACAACAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
............................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................C----------AGCA-GCAG------------CAGCAA------------C------------------AGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010000000
................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA-GCAG------------CAGCAA------------C------------------AGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC----------AGCA-GCAG------------CAGCAA------------C------------------AGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
.......................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
....................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------CATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAGC----------AGCA-GCAG------------CAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC----------AGCA-GCAG------------CAGCAA------------C------------------A........................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
CGC-AC-----CAG---TCGC-----------------------------------------------------------------ATC------AGCAGCAGCAGCCGCACCAGTCG-----------------------CATCA---GC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CTGCTTCAGCAGCAGCAACTTCAGCAGCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------CTTCAGCAGC--AGCATCAG------CAGCAGCT------------------------------------------GCAGCATCAACAGCAGCT----------------------------------------------------------GCAACATCAACA------------GCAGCTGC------------------------------------AG---------------------------------------CATCAACAGCAGCTG------------------C-------------------AGCATCAACACCAACTG---------------------------------CAGCAGCAGCAGCATCA---GCAGCA----------------GCT-GCAGCA---T-----------------------------------CAG------CATCAC-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................GTCG-----------------------CATCA---GC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.5020000200
..............................................................................................................................................................................................................................................................................................AACTTCAGCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000100
...................................................................................................GCAGCAGCCGCACCAGTCG-----------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3311000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------GCAGCTGC------------------------------------AG---------------------------------------CATCAACA..........................................................................................................................................................................................................1930.3310001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTG------------------C-------------------AGCATCAACA...................................................................................................................................................1930.3310001000
....................................................................................................................CG-----------------------CATCA---GC--------------------------------------------------------------------------------AGCAG---CAGCAG-------------------------CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCT------------------------------------------GCAGCATCAACA...............................................................................................................................................................................................................................................................................................................................................................................................1930.3310001000
........................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAA--------------------------------------------------------------------------------------------------------CTTCAGCAGC--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000
..........................................................................................................................................................................................................................................................................................................AGCAGCAGCAA--------------------------------------------------------------------------------------------------------CTTCAGCAGC--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010000010
.....................................................................................................................................................................................................................................................................................AGCAGCAGCAACTTCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010000010
................................................................................................................................................................................................................................................................................................CTTCAGCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.1320010010
.........................................................................................................................................................................................................................................................................................GCAGCAACTTCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1311000000
..............................................................................................................................................................................................................................................................................................................GCAGCAA--------------------------------------------------------------------------------------------------------CTTCAGCAGC--AGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1311000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------CAGCAGCAGCAGCATCA---GCA....................................................................................21200.1020000200
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCATCA---GCA....................................................................................20200.1022000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------CAGCAGCAGCAGCATCA---GCAGCA----------------GC...............................................................26200.0511000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCATCA---GCAGCA----------------GC...............................................................21200.0511000000

Generated: 05/16/2015 at 08:27 PM