ID:

dvi_13026

 Coordinate:

scaffold_12970:3037086-3037236 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.1 -41.0 -41.0

Flybase annnotation

CDS [Dvir\GJ19186-cds]; exon [dvir_GLEANR_4070:1]; intron [Dvir\GJ19186-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron+
mature
  1. scaffold_2123:249-269 +
  2. scaffold_9476:13722-13742 +
  3. scaffold_12723:573202-573222 +
  4. scaffold_12723:961135-961155 +
  5. scaffold_12730:116398-116418 +
  6. scaffold_12799:145254-145274 +
  7. scaffold_12931:60729-60749 +
  8. scaffold_12958:295922-295942 +
  9. scaffold_12958:1951717-1951737 +
  10. scaffold_12958:3498903-3498923 +
  11. scaffold_12963:13159735-13159755 +
  12. dvi_13026  scaffold_12970:3037166-3037186 +
  13. scaffold_13042:5177964-5177984 +
  14. scaffold_13047:11522694-11522714 +
  15. scaffold_13049:24834349-24834369 +
  16. scaffold_13049:24870549-24870569 +
  17. scaffold_13050:1292413-1292433 +
  18. scaffold_13324:652372-652392 +
  19. scaffold_13324:1876998-1877018 +
  20. scaffold_13324:2347651-2347671 +
  21. scaffold_9407:3770-3790 -
  22. scaffold_9503:701-721 -
  23. scaffold_11515:854-874 -
  24. scaffold_12473:5628-5648 -
  25. scaffold_12736:223356-223376 -
  26. scaffold_12736:413722-413742 -
  27. scaffold_12929:551470-551490 -
  28. scaffold_12937:209695-209715 -
  29. scaffold_12958:1245536-1245556 -
  30. scaffold_12958:3031252-3031272 -
  31. scaffold_12958:3126968-3126988 -
  32. scaffold_12970:2987580-2987600 -
  33. scaffold_13047:1586615-1586635 -
  34. scaffold_13047:1597752-1597772 -
  35. scaffold_13047:1630648-1630668 -
  36. scaffold_13047:5640970-5640990 -
  37. scaffold_13049:24948380-24948400 -
  38. scaffold_13052:1835152-1835172 -
  39. scaffold_13052:1843100-1843120 -
  40. scaffold_13324:409907-409927 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACATAACTCCGCGAGGAGATATGACGTTCCAAAACGACATAATATCTCGGGTAATAGCTCCGAGCGGAATATATATATATGCATTCGAAGTTAGAAGAAGAGGGTCCAGGGTATCATCTGGTCGGGAGCTCCCGACTAGAACCTCTTACTTGTTTCATGTGTATTTGTGCACATATAACTGTCACACACACACAGGCACAGCTGGAGCCCTACACTGAACTGTGCGGCACACAATTTTTATTTAATAAATA
**************************************************....(((((.((((((..(((....))).)))..))).)))))...((((.((((...((((....((((((((((....))))))))))))))...)))).)))).(((((...((((.(((......)))))))...))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 M047
female body
 GSM1528803
follicle cells		 SRR060658
140_ovaries_total
 SRR060678
9x140_testes_total
 SRR060657
140_testes_total
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106729
mixed whole adult body
......................................ATAATATCTCGGGTAATAGCT................................................................................................................................................................................................ 21 0 20 0.60 12 11 0 0 0 1 0 0 0 0 0 0
....................................................................................................AGGGTCCAGGGCATCGTGTG................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
...............................................CGGGTAATAGCTCCGAGCGGA....................................................................................................................................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................TAGAAGAAGAGGGTTCAGGGTATCA....................................................................................................................................... 25 1 20 0.10 2 0 0 0 0 0 0 0 0 1 1 0
..................................................................................................................................CCCGACTAGAACCTCTTACTT.................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CTAGAACCTCTTACTTGTTTC............................................................................................... 21 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0 0
.........................................ATATCTCGGGTAATAGCTCC.............................................................................................................................................................................................. 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................CCGACTAGAACCTCTTACTTGTTTCA.............................................................................................. 26 0 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................AAGTTAAAAGGAGAGGGT.................................................................................................................................................. 18 2 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................TCGGGAGCTCCCGACTAGAACCTCTTACT..................................................................................................... 29 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................GAGCTCCCGACTAGAACCTCT......................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................CCCGACTAGAACCTCTTACTTGT.................................................................................................. 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
...............................................CGGTTAATAGCTCCGAGCGGA....................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................CGGGAGCTCCCGACTAGAACCT........................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
......................................ATAATGTCTCGGGTAATAGCT................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................CCGACTAGAACCTCTTACTTGATTC............................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TGTATTGAGGCGCTCCTCTATACTGCAAGGTTTTGCTGTATTATAGAGCCCATTATCGAGGCTCGCCTTATATATATATACGTAAGCTTCAATCTTCTTCTCCCAGGTCCCATAGTAGACCAGCCCTCGAGGGCTGATCTTGGAGAATGAACAAAGTACACATAAACACGTGTATATTGACAGTGTGTGTGTGTCCGTGTCGACCTCGGGATGTGACTTGACACGCCGTGTGTTAAAAATAAATTATTTAT
**************************************************....(((((.((((((..(((....))).)))..))).)))))...((((.((((...((((....((((((((((....))))))))))))))...)))).)))).(((((...((((.(((......)))))))...))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060684
140x9_0-2h_embryos_total
 SRR060669
160x9_females_carcasses_total
 M047
female body
 SRR060678
9x140_testes_total
 SRR060687
9_0-2h_embryos_total
 V053
head
 SRR060656
9x160_ovaries_total
 SRR060683
160_testes_total
...................................................ACCATCGGGGCTCGCCTTA..................................................................................................................................................................................... 19 3 12 0.25 3 1 0 0 1 1 0 0 0
................................................................................CCGGAGCTTCAATCTTCTTC....................................................................................................................................................... 20 3 9 0.11 1 0 1 0 0 0 0 0 0
..TATTGAGGCGCTCCTCTATACT................................................................................................................................................................................................................................... 22 0 20 0.10 2 0 0 2 0 0 0 0 0
..................................................................................................................................GGGCTGATCTTGGAGAATGAACAAAG............................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................ATTGACAGTGTGCGTGTC.......................................................... 18 2 12 0.08 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................................TAAAAATAGATTATTTAT 18 1 19 0.05 1 1 0 0 0 0 0 0 0
.............TCCTCTATACTGCAAGGTTTTGC....................................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 1
...............................................................................................................................CGAGGGCTGATCTTGGAGAAT....................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:3037036-3037286 + dvi_13026 -ACATAACTCCGCGAG-G------------------------AGATATGAC-------------------------GTTCCAAAACGACATAATATCTCGGGTAATAGCTCCGAGCGGAA-TATATATA--------------------------T------------ATGCATTCGAAGTTAGA--AGAA-GAGGGTCCAGGGTATCATCTGGTCGGGAGCTCCCGACTAGAACC-TCTTACTTGTTTCATGTGTA-TTTGTGCA---------CATATAACTGTCACACACACACAGG-CACAGCTGGAGCCCTACACTGAACTGTGCGGCACACAATTTTTATTTAATAAATA
droMoj3 scaffold_6680:22241116-22241302 - TATGTATGTGTGCATA-A------------------------AAATGCAGA---------AT--------------GATTAGA--------------------------------------------------------------------------------ATAT---------------CAGCT--TA-GAGGGTTCAGGGTATCTCCTAGTCGAGCAGTCTCGACTAGAGCCTTCTTACTTGTTCTGTTTGTAACTTATGGATTCTACTTGTAAACCACTGTTAGATACACACGAGCCACATCTGCCCCCGCATGCTAAGCTTTATGAC-----------------------
droWil2 scf2_1100000004515:1741992-1742114 + -ACATATCTCCGCGCG-A------------------------AATTATGTC-------------------------GTTTCAGAACGACAAATA--TTCCTAA----------------------------TCTAA--ATAACTAAACAACAGAATCGTTGAAATATATTACAATATGATTTAAACCAGGA-AAGTATTTAGGGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_singleton_1421:182-268 + -ACATATCTCCGCGCG-G------------------------AGCTATGAC-------------------------GCTTAGAAGCGACATATC--TCCGCGCAGCGATTTTGAGCAAAT-TATGCCGA--------------------------T------------ACACCA---------------TCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_6336:1397-1483 + -ACATATCTCCGCGCG-G------------------------AGATATGAC-------------------------GCTTAGAAGCGACATATC--TCCGCGCAGCGATTTTGAGCAAAT-TATGCCGA--------------------------T------------ACACCA---------------TCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000300620:32-136 + -ACATAACTCCGCGCG-G------------------------AGATATGTCGTTTGTAGTTCGGCGGAGATATGTCGCTTTAAAGCGACATAAC--TCCGCGC-------------GGAGATATGTCGTT--------------------------------------TGTAG-------TTCGG--CGG-AGA------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000489519:6911-6971 - -ACCTAATTTCGCGGG-G-AAAAACGACATAATTTCAC-CG-----------------------------------GCCTCGAAACTATAAATA--TAT--------------------------------------------------------------------------------------------ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778200:9123-9184 + -ACATATCTCCGCCCTTCTGCAAACGACATATCTCCGCGCGGAGAT----------------------------------------------------------------------------GTGACGTT--------------------------------------AAAAA-----------------AAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000299101:14197-14252 + -ACATATTTCCGCGCG-G------------------------AGATATGAC-------------------------GTTTCAAGACGACATATC--TCCGCGC-------------GGAG------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412279:11805-11893 + -ACATAAGTTCGCGGCAG------------------------A--------------------------------------AAAACGACTTAAT--TTCGCCG-------------GCACATGTATAGTTATATATATATATATGTAAAACATAGT------------TCACGA---------------TATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2L_random_001:396002-396021 - -ACATAACTCCGCGAG-G------------------------AGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:18024903-18024943 - -ACATTATTCCGCGCA-G------------------------AGATATGAC-------------------------GTTTCATA-GGACATAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
-ACATAACTCCGCGAG-G------------------------AGATATGAC-------------------------GTTCCAAAACGACATAATATCTCGGGTAATAGCTCCGAGCGGAA-TATATATA--------------------------T------------ATGCATTCGAAGTTAGA--AGAA-GAGGGTCCAGGGTATCATCTGGTCGGGAGCTCCCGACTAGAACC-TCTTACTTGTTTCATGTGTA-TTTGTGCA---------CATATAACTGTCACACACACACAGG-CACAGCTGGAGCCCTACACTGAACTGTGCGGCACACAATTTTTATTTAATAAATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................ATAATATCTCGGGTAATAGCT......................................................................................................................................................................................................................................................21200.60121100000000000000000000000000010000000000000000000000000000000000
..................................................................................................CGGGTAATAGCTCCGAGCGGA.............................................................................................................................................................................................................................................2150.201000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................CCCGACTAGAACC-TCTTACTT...............................................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CTAGAACC-TCTTACTTGTTTC..........................................................................................................21200.102000000002000000000000000000000000000000000000000000000000000000
............................................................................................ATATCTCGGGTAATAGCTCC....................................................................................................................................................................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CCGACTAGAACC-TCTTACTTGTTTCA.........................................................................................................26130.081001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TCGGGAGCTCCCGACTAGAACC-TCTTACT................................................................................................................29200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................GAGCTCCCGACTAGAACC-TCT....................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................CCCGACTAGAACC-TCTTACTTGT.............................................................................................................23200.051000000010000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CGGGAGCTCCCGACTAGAACC-T......................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TATGTATGTGTGCATA-A------------------------AAATGCAGA---------AT--------------GATTAGA--------------------------------------------------------------------------------ATAT---------------CAGCT--TA-GAGGGTTCAGGGTATCTCCTAGTCGAGCAGTCTCGACTAGAGCCTTCTTACTTGTTCTGTTTGTAACTTATGGATTCTACTTGTAAACCACTGTTAGATACACACGAGCCACATCTGCCCCCGCATGCTAAGCTTTATGAC-----------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................TAGA--------------------------------------------------------------------------------ATAT---------------CAGCT--TA-GAGGGTTC............................................................................................................................................................23200.459000090
...............................................................................................................................................................................................................................CTCGACTAGAGCCTTCTTACTTGT.............................................................................................................24200.255000050
..............................................................................................................................................................................................................TCTCCTAGTCGAGCAGTCTCGACTAG............................................................................................................................26200.102200000
......................................................................................................................................................................T---------------CAGCT--TA-GAGGGTTCAGGGT.......................................................................................................................................................21200.051000010
droWil2
-ACATATCTCCGCGCG-A------------------------AATTATGTC-------------------------GTTTCAGAACGACAAATA--TTCCTAA----------------------------TCTAA--ATAACTAAACAACAGAATCGTTGAAATATATTACAATATGATTTAAACCAGGA-AAGTATTTAGGGTAT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........GCGCG-A------------------------AATTATGTC-------------------------GTTTCAGAACGAC...........................................................................................................................................................................................................................................................................28200.05101000
..........CGCGCG-A------------------------AATTATGTC-------------------------GTTTCAGAACG.............................................................................................................................................................................................................................................................................27200.05101000
dp5
-ACATATCTCCGCGCG-G------------------------AGCTATGAC-------------------------GCTTAGAAGCGACATATC--TCCGCGCAGCGATTTTGAGCAAAT-TATGCCGA--------------------------T------------ACACCA---------------TCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......TCTCCGCGCG-G------------------------AGCTATGAC-------------------------G.......................................................................................................................................................................................................................................................................................2170.8660600000000
......TCTCCGCGCG-G------------------------AGCTATGAC-------------------------........................................................................................................................................................................................................................................................................................2070.2920200000000
..............................................................................TTAGAAGCGACATATC--TCCGCGC.............................................................................................................................................................................................................................................................2340.2510100000000
...............................................TGAC-------------------------GCTTAGAAGCGACATATC--TCCGC...............................................................................................................................................................................................................................................................2740.2510100000000
..................................................C-------------------------GCTTAGAAGCGACATATC--TCCG................................................................................................................................................................................................................................................................2340.2510100000000
..............................................................................TTAGAAGCGACATATC--TCCGC...............................................................................................................................................................................................................................................................2140.2510010000000
................................................GAC-------------------------GCTTAGAAGCGACATATC--TCCGCGC.............................................................................................................................................................................................................................................................2840.2510010000000
........TCCGCGCG-G------------------------AGCTATGAC-------------------------GCTTAGAAGC..............................................................................................................................................................................................................................................................................2840.2510100000000
....TATCTCCGCGCG-G------------------------AGCTATGAC-------------------------GCTT....................................................................................................................................................................................................................................................................................2650.2010100000000
........TCCGCGCG-G------------------------AGCTATGAC-------------------------GC......................................................................................................................................................................................................................................................................................2050.2010100000000
....TATCTCCGCGCG-G------------------------AGCTATGAC-------------------------GCTTA...................................................................................................................................................................................................................................................................................2750.2010100000000
........TCCGCGCG-G------------------------AGCTATGAC-------------------------GCTTAGA.................................................................................................................................................................................................................................................................................2550.2010100000000
.........CCGCGCG-G------------------------AGCTATGAC-------------------------GCTT....................................................................................................................................................................................................................................................................................2150.2010100000000
......TCTCCGCGCG-G------------------------AGCTATGAC-------------------------GC......................................................................................................................................................................................................................................................................................2250.2010100000000
.......................................................................................ACATATC--TCCGCGCAGCGATTTT....................................................................................................................................................................................................................................................2360.1710100000000
........................................................................................CATATC--TCCGCGCAGCGATTTT....................................................................................................................................................................................................................................................2260.1710010000000
........................................................................................CATATC--TCCGCGCAGCGATTT.....................................................................................................................................................................................................................................................2160.1710100000000
.......................................................................................ACATATC--TCCGCGCAGCGATTT.....................................................................................................................................................................................................................................................2260.1710000100000
............................................................................................TC--TCCGCGCAGCGATTTTGAGCA...............................................................................................................................................................................................................................................2370.1410100000000
..........................................................................................TATC--TCCGCGCAGCGATTTTGAGCA...............................................................................................................................................................................................................................................2570.1410100000000
.......................................................................................ACATATC--TCCGCGCAGCGATT......................................................................................................................................................................................................................................................2170.1410100000000
..........................................................................................TATC--TCCGCGCAGCGATTTTGA..................................................................................................................................................................................................................................................2270.1410100000000
.......................................................................................ACATATC--TCCGCGCAGCGAT.......................................................................................................................................................................................................................................................2070.1410100000000
............................................................................................TC--TCCGCGCAGCGATTTTGAGC................................................................................................................................................................................................................................................2270.1410100000000
..........................................................................................TATC--TCCGCGCAGCGATTTTGAG.................................................................................................................................................................................................................................................2370.1410000100000
...................................................................................................................CAAAT-TATGCCGA--------------------------T------------ACACCA---------------T......................................................................................................................................................................2180.1310100000000
................................................................................................TCCGCGCAGCGATTTTGAGCAAAT-...........................................................................................................................................................................................................................................2480.1310100000000
................................................................................................TCCGCGCAGCGATTTTGAG.................................................................................................................................................................................................................................................1980.1310100000000
................................................................................................TCCGCGCAGCGATTTTGAGC................................................................................................................................................................................................................................................2080.1310100000000
..CATATCTCCGCGCG-G------------------------AGCTAT....................................................................................................................................................................................................................................................................................................................2190.1110100000000
..CATATCTCCGCGCG-G------------------------A.........................................................................................................................................................................................................................................................................................................................16200.0510000000010
droPer2
-ACATATCTCCGCGCG-G------------------------AGATATGAC-------------------------GCTTAGAAGCGACATATC--TCCGCGCAGCGATTTTGAGCAAAT-TATGCCGA--------------------------T------------ACACCA---------------TCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................ACATATC--TCCGCGCAGCGATTT.....................................................................................................................................................................................................................................................2220.501010000
.....................................................................................CGACATATC--TCCGCGCAGTT.........................................................................................................................................................................................................................................................2040.251000001
droKik1
-ACATAACTCCGCGCG-G------------------------AGATATGTCGTTTGTAGTTCGGCGGAGATATGTCGCTTTAAAGCGACATAAC--TCCGCGC-------------GGAGATATGTCGTT--------------------------------------TGTAG-------TTCGG--CGG-AGA------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
-ACCTAATTTCGCGGG-G-AAAAACGACATAATTTCAC-CG-----------------------------------GCCTCGAAACTATAAATA--TAT--------------------------------------------------------------------------------------------ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
-ACATATCTCCGCCCTTCTGCAAACGACATATCTCCGCGCGGAGAT----------------------------------------------------------------------------GTGACGTT--------------------------------------AAAAA-----------------AAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
-ACATATTTCCGCGCG-G------------------------AGATATGAC-------------------------GTTTCAAGACGACATATC--TCCGCGC-------------GGAG------------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
-ACATAAGTTCGCGGCAG------------------------A--------------------------------------AAAACGACTTAAT--TTCGCCG-------------GCACATGTATAGTTATATATATATATATGTAAAACATAGT------------TCACGA---------------TATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
-ACATAACTCCGCGAG-G------------------------AGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
-ACATTATTCCGCGCA-G------------------------AGATATGAC-------------------------GTTTCATA-GGACATAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/19/2015 at 05:57 PM