ID:

dvi_12880

 Coordinate:

scaffold_12970:2085100-2085250 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.6 -28.3 -28.0

Flybase annnotation

exon [dvir_GLEANR_3843:20]; CDS [Dvir\para-cds]; intron [Dvir\para-in]

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+
Gypsy7-I_Dya-intLTRGypsy+
mature
  1. scaffold_12723:501387-501406 -
  2. scaffold_12823:733974-733993 +
  3. scaffold_12823:791874-791893 +
  4. scaffold_12855:8998-9017 +
  5. scaffold_12855:5132337-5132356 -
  6. scaffold_12855:8546206-8546225 -
  7. scaffold_12855:8892820-8892839 +
  8. scaffold_12875:16780472-16780491 +
  9. scaffold_12928:959113-959132 +
  10. scaffold_12932:283621-283640 -
  11. scaffold_12932:900179-900198 -
  12. scaffold_12963:5944486-5944505 -
  13. dvi_12880  scaffold_12970:2085188-2085207 -
  14. scaffold_13036:585950-585969 +
  15. scaffold_13042:1705109-1705128 -
  16. scaffold_13042:3778621-3778640 +
  17. scaffold_13042:3804624-3804643 +
  18. scaffold_13047:827160-827179 +
  19. scaffold_13047:6364102-6364121 +
  20. scaffold_13049:789673-789692 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACATGAAGAACAATAAGCCGAAGAAATCCAAATATCTAAATAATGCAACGGTAAATAAGACAACTCGAATTTGATTTTCATTCAATTGCATACCTCAATATATATATATATATATATATATATATATATATATATATATATACATACATATATGCATACATATATATTTGATAAATACGTTTATATACGTCTATATATGAAAGTGCCATGCAATCATTTTCAATTGAAGAAAGTGAGTATAACACAATGGA
**************************************************....................((((.......)))).((((((......((((((((((((((((((((....))))))))))))))))))))........))))))..((((((((..........((((......)))).))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR060684
140x9_0-2h_embryos_total
 M047
female body
 SRR060663
160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 V116
male body
.......................................................TGAGACAACGCGAATTTG.................................................................................................................................................................................. 18 2 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................................................................CAATTGAAGAAGGGGAGT............. 18 2 5 0.20 1 0 1 0 0 0 0
........ATCAATAAGCGGAAGAAA................................................................................................................................................................................................................................. 18 2 14 0.07 1 0 0 1 0 0 0
......ATATCAATAAGCCGAGGAAA................................................................................................................................................................................................................................. 20 3 18 0.06 1 0 0 0 1 0 0
...................................................................................................................................................................................................GATGGAAGTGTCATGCAAT..................................... 19 3 20 0.05 1 0 0 0 0 0 1
.............................................................................................CTCAATATATATATATATAT.......................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

TGTACTTCTTGTTATTCGGCTTCTTTAGGTTTATAGATTTATTACGTTGCCATTTATTCTGTTGAGCTTAAACTAAAAGTAAGTTAACGTATGGAGTTATATATATATATATATATATATATATATATATATATATATATATGTATGTATATACGTATGTATATATAAACTATTTATGCAAATATATGCAGATATATACTTTCACGGTACGTTAGTAAAAGTTAACTTCTTTCACTCATATTGTGTTACCT
**************************************************....................((((.......)))).((((((......((((((((((((((((((((....))))))))))))))))))))........))))))..((((((((..........((((......)))).))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 SRR060677
Argx9_ovaries_total
 SRR060666
160_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060665
9_females_carcasses_total
 SRR060681
Argx9_testes_total
.........................................................................................................................................................................CCAATTATGCAAATATATG............................................................... 19 2 6 0.17 1 1 0 0 0 0 0 0 0 0
............TATTCGGATTGTTTAGGTTAA.......................................................................................................................................................................................................................... 21 3 9 0.11 1 0 1 0 0 0 0 0 0 0
............................................................................AAGCGAGTTAACGTATGG............................................................................................................................................................. 18 2 10 0.10 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................CTTTCACTCAGGTTGGGTTA... 20 3 12 0.08 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................ATAGACTATTTATGCAGA..................................................................... 18 2 15 0.07 1 0 0 0 0 1 0 0 0 0
...................................................................TTAAACGAAAAGTAGGTTA..................................................................................................................................................................... 19 2 16 0.06 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................TGTATGTATATACGTATGAAT......................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................GTATGTATATACGTATGTA.......................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................TGTATGTATATACGTTTGTAT......................................................................................... 21 1 20 0.05 1 0 0 0 0 0 0 0 0 1
.............................................................................................................................................TGTGTGTATATACGTATGTATA........................................................................................ 22 1 20 0.05 1 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:2085050-2085300 - dvi_12880 ACATGAAGAACAAT-----------------AAG-----CCGAAGAAA----TCCA------------------------------------------AA--------TATCTAAATAATGCAACGG---------------------------------------------TAAATAAGACAACTCGAATTT-------------------------------G----ATTTTCA-TTC------------------AA----------------------------------------------------T------------TGCATACCTCAA-TAT----------------------------------------------ATA-----------------------TAT--------------------------------------------A------------TATATATATATATATATATATATATATATATATACA--TACA----------------------------TA-------------TATGCATACATATATATTTGATAAATA------------------------------------------------------------------------------------CGTT--------------------TATATACGTCTAT---------------------------------------AT----ATG--AAAGTGCCATGCAATCATTTTCAA-------------------------------------TTG-----------AAGAA-----AGTGA---GTA-----TAACACAATGGA
droMoj3 scaffold_6359:3299239-3299525 - ACATGAAGAACAAC-----------------AAG-----CCGAAGAAA----TCCA------------------------------------------AA--------TATCTAAATAATGCAACGG---------------------------------------------TAAATAAAACAACTCGAATTC-------------------------------G----ATTATCTAT----------------------------------------------------------------C--TATAA-AATATACATAT--GCAT----ATACA-TAT------------------------------------------A----TATGTATGTATAT-----------------------TCTC-TGT----TTGGATCATGATATATATGTATGTGTATGTA----TGTA------------TAT--------------ATTTG--TGTG----------------------------TA-------------TATATATTCATAGATATTTGATAAATA------------------------------------------------------------------------------------GA-T--------------------TATGTGCGT-------------------------------------------------ATGCAAATAC--ACTGCAAACATTTTTGCGTATAGAATATTGTAG---------------------G--------------T-AA-----AGTGT---ATA-----TGGGGCTATAGA
droGri2 scaffold_14853:6917189-6917412 + ATATGAAAAACAAT-----------------AAG-----CCGAAGAAA----TCCA------------------------------------------AA--------TATCTAAATAATGCAACGG---------------------------------------------TAAATAAGACAACTCGAATTT-------------------------------A----AT------TACATACTATTC---------AATTTTCAATTACAAT---------------------TATAC------------------------ATGCACATTTGAA-CAT----------------------------------------------ACA-------------------------------------TGTACGCAT-------------------------------AATATATA--------------T----------------------------ATGT-------------------------------------AC---------------------------------------A-TACAT--------------CTATGCG---------------------------------------------TG------TTT----ACATGTGTACATACATATTTG-CCAGGG----------------------------------------------CCATGACAACATTTTGAA---------------------------------AT-------------------------------------G---------AAGAAAG
droWil2 scf2_1100000004521:4944207-4944442 - ACCAAAAAAACAAA------------------AA-----CCGAAGAAAGTATTTTA------------------------------------------AA--------AATTTA-------------------------------------------------------------------------------------------------------------------AATATATATACAT-------GAAGTACT--------ATATAT---------------ACAATATATTATAT------------------------ATACATATAT-----------------------------------------------------------------------------------TAT----ATATATAT--------------------------ATAGATATA----CATA--------------T----------------ATA-------------------------------------------------TAT---------------------------------------A-TATAT--------------ATATATG---------------------------------------------TA------TATACATA----TATATATGTCTATATA------------------------TTAATGGGGTATGGTAACGAACAAAAACACCGCACAATAATATACAA-------------------------------------AAA-----------AAA-A-----AATGA---CAA-----GGACAAAACGAA
dp5 XL_group1a:1517649-1517852 - CCATAAAACAC--C-----------------AAT-----TCAAAATA-------CA-ATATACAAATATAATAATAATAATAATAATAA-----------------------TAACTAGCATTCGTA-----------------------------------------------------CCAACCCGCCTCT-------------------------------A----CCT--------------------------AC-----------------------------------CT-----------------------------AC----CT-----AC-----------------------------------------------------------------ATACATACAT----ATATATATATAT--------------------------ATATATATG--------------------------------------------------------------------------TATATA----TA-----AAT----------------------------------------C-A--TAT----------ATA---------------------------------------------------TATATATC---A-------------------TAT-A-------------------------------CATATGT----AT---AGATCATATATATTATATATTC-------------------------------------ATTCA-------------------------------------------TTCATT
droPer2 scaffold_11:573980-574186 - ACAAATAAAATAAA------------------G-AAAGC-------AA----GCA--AAA-----------------------------AACCAACAAAA-TACGAAATACACA--------------------------------------------------------------------------------------------AAAGGATAATGCTACGAAAATAAAATAACTGTTCAT-------TAATATTGC--T-------------AAACAAAACAAT----------TTA------------------TTT-------------------AT-----------------------------------------------------------------ATATATATAT----ATATATATATAT--------------------------ATATATATA----TATA--------------T--------------------------------------------------------A----TA-----TAT---------------------------------------G-TATATGTATAAA--------------TAT-------------------------------------------A------TAT----------GTATATGTATAT---------------------------------------AA----AT------AT---------------------------------------A---------------------------------------------------A---------TAAAAGT
droAna3 scaffold_12943:4358603-4358799 - AATGAACAAAATA------------------AAA-----CCATAATGA-------------GCA----------------------------------AG--------T---------------AAGAAAAAAATACGAAAATGAGAATCTTTATTATATAAATTATAC-------------AATTT----------------------------------------------------A------------------AA----------TC--AGATAAGCGAAT----------AT----A----CAT-------TAT----ATAT----AT----------------------------------------------------------------------------------------------------------------------------ATATATATA----TATA--------------T------------------------------------------ATACACGTACATATA--------------------------------------------------------------------------------------------------------------------------------------------------------CATCTACTTA------------------------TTATTTGTAAATAA----GT---AA------------------------------------------AGCATAAATTTTC--ATTTGAA----------------------------------------AACCCCA
droBip1 scf7180000396615:15467-15664 + AAATGAAGAGCATT-----------------ACG-----GGGAAG-------------------------------------------------------------------TAAGTAGTGCCACTG---------------------------------------------TCAAACGGTTGCCCGAGGATT-----------------------------------TATTAATTTTTTA------------------------------------------------------------------TTA-TATATATAT----ATTT----AT--GT-AT--------------------------------------ATATAT--GT--TTATGTATATGTATA-----------TGT----ATATGTAT--------------------------ATGTATATG----TATA--------------T----------------GTATATGTA-------------------------------------------T-----------------------------------------A-----T--------------GTATATG---------------------------------------------TATATGTATATGTATATGT----AT------A----------------------------------------------------------------TGTAT---------------------------------------AT-------------------------------------G---------TATATGT
droKik1 scf7180000302373:131411-131639 - AAAAACAAAAATTC------------------A-AAAAA---AAA---------AA-ATT-----------------------------GACTGATAAAT-TAGCAA--------------------------------------------------------------------------TAATTT----T--------------AAG---------------------ACACCAGCATAC-------ATAAATCAA--TACCTACCTATCAA---------------------TACCT-----------------------------------------------------ACACA-----------------------------------------------------------------------------A-------------------------------AATATATG--------------T----------------------------ATGTATACATATACATACAAGTATATATATGAAT------------------------------------------------A-----TATATAT--------------ATAT--------------------------------------------------------------------------------AAAGC----------------------------------------------TTACGAT-------TCATGTGAAT---AAAAAGACTTATACATTTAT------AGTC-----------AATCATACTTA-A---TATTTA-----TA---ATACAAT
droFic1 scf7180000453872:622698-622907 + ACACAAAGAACTATTTAATTTATAGAAAACAAAA-----TCACAAGCA----ACCA------------------------------------------AA--------T---------------CTGACAAAAATATGCAAATACAAATTCAATTTACCCAAATCGTATGAAC-----------------------------------------------------------------------------------------------------AAATAACGCAAT----------CTT------------------TAT-------------------AT----------------------------------------------ACA-------------------------------------TA------------------------------TA------------TATATATA------TAT------------------------------------------ATATAAATATATATA----TATTTAT--------------------------------ATATATAAACAC---------AAGT----ATA---------------------------------------------------TATATGTG---A-------------------AGT-AC--------------------------------------------------------------ATATAAAG---------------------------------TT-------------------------------------A---------AATATAA
droEle1 scf7180000491272:894112-894364 + TGAAAATCAACAAG-----------------CAA-----CCGAAAATTGTAGCCTA------------------------------------------AAT-------TACCAAAACAAAACAAAAC---------------------------------------------GAAACAAAACAATATA------------------------------------------T---T-------------------------------TGTAT---------------GTCATATATTATATATA----CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATA------TACATATAC------------------------------------ATACACATATACATATATATATAGAT------------------------------------------------A-----TATATAT--------------ATATATACTGGAGCCTTGTTCCTGCTGGGCCAATTACAAGGACACA--------------------TATATATTTCTAT---------------------------------------AG----GC------------------------A-------------------------------------AATTG-----------AAGGTACCAC-A---GGAAGCAACCACAACAGAAAGCA
droRho1 scf7180000770833:757-893 - TAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTCGAAAA-----------------------------------------ATTTTTTGTATATATC---------TATATATGTATATACA---------------------TATAT------------------------ATGTATATAT---------------------------------------------------------------------GTA-----------TAT----ATGTATAT--------------------------ATGTATATA----TGTA--------------T----------------ATAT-------------------------------------------------GT---------------------------------------A-TATAT--------------GTATATA---------------------------------------------TG------TAT----ATATGTATATATGT------------------------------------------------------------------------------------------------------------------------------------------------------A---------TATATGT
droBia1 scf7180000298095:48-232 - ATATATATAAAGAT-----------------AAG-----ACAAAGGCA----TATA------------------------------------------CA--------TACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC----AT-----ACATATAAATATATATATACATATATATATATTTATTTATTTAAATATATA-------------------------------------TA------------------------------TA------------TATATTTA------TTT------------------------ATTTA------------------AATATATATA----TATTTAT--------------------------------TTATTTAAATAT---------ATA-TATA------------------------------------------------------TATATTTATTTAAATATAT----AT----------------------------------------------------------------------AAATAT---------------------------------------AT-------------------------------------A---------TATATAT
droTak1 scf7180000415660:255968-256167 + ATCAAAAAAAATAT------------------AA-----TGAAAGTAA----ATAA------------------------------------------TA--------TGTCTAATTAA-ATAAAAA---------------------------------------------TAAATC----------------------------GTAGGATGATCTAGACATGGTATATTAATCCTTCA------------------T----------------------------------------------------T------------TATATATATAAA-TAT----------------------------------------------ATA-----------------------AAT--------------------------------------------A------------TATATATATATATAAATATATATAAA-----------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------A----TATAAATATACAGT-ATCTAAAACCATAATATTTCTGATTTCAATGAG--------------------------------------G---------------------------------TC-------------------------------------A---------TATAAGT
droEug1 scf7180000409178:56605-56850 + ATGAAAAACAAATT------------------G-AAAGCGAAAAAAT--GAG---A----------------------------------------AAAA--------TAAAAATATAAAAACACAA---------------------------------------------TAAA------------------------------------------------------T-TACATTTTAT-----GT---------AC-----------------------------------CTTT--------------------T-------------------AC-----------------------------------------------------------------ATATATATAT----ATATGTATATAT--------------------------ATATATATA--------------------------------------------------------------------------TATATA----TA-----ACT---------------------------------------G-TGTATATATAAA--------------TATATATTACACAC---------------AAAACACAC--ACACA--------------------CACACACTACTAT---------------------------------------GT----ATA--GAAACAA-----------------------------AACGTTTAAATATATATTTTT--TTTCAAAATT-----TATGAT-----AATGG---AAA-----TTATACAATAAA
dm3 chrX:18097464-18097702 - AACAATAAATCTAT------------------G------------CAA----AAACAATTTGCAAATTGCACAA--------------------GTAAAA--------TACAAA----------------------------TGG------------------------------------GGACTTCTATAT-------------------------------A----AT------AATAGA--------------------------------------------------------------------TGTAT----------AT----AT-----AATTATCAATATCTGTGTGTGTGTATATATATTTATATATATATATATATA-------------------------------------CA------------------------------TA------------TA--------------T----------------ATATTTCTCTCTC------------------TCTATACATA----TATATAT--------------------------------ATATATAGGTGT---------GTA-TAT---------------------------------------------------------------------------------------------------------------------------------------C--AATTT------------------------------------------------------ATTTGGCCATTATCTAGGTATATTTA-A---ATACGAG-----T---GTACAAC
droSim2 3r:16508687-16508933 + AATATGCTAA---------------------------------ACAAC----CACA------------------------------------------AA--------TATT--AAGAATATTTAAG---------------------------------------------CAAATGATACAATTT----TT-------------------------------G----AATTTTTGTCCAT-------AAGTTACAA--TTCTCACACATCAT---------------------TTTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------TA------------------------------AG------------TATATATA------TAT------------------------------------------ATTCGTATATATATA----TATATAT--------------------------------ATATCTAGACAT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAAATCCTTGAACTTC-------------------------------------AATTG-----------ATGATTTTAA-A---CGAAGAA-----A----ACATAA
droSec2 scaffold_0:16589166-16589388 + AGCGGCAAATCAAA-----------------CAG-----CCAGAAAT--GAGCTTA------------------------------------------AA--------CGCAAACAAACAGCAACAT---------------------------------------------TAAATTAAGT------------------------------------------------------ATACAT------------------------------------------------------------CTCCATTA-TATATATAT----ATAT----AT--AT-AT--------------------------------------ATATAT--AC--ATATGTATATATATA-----------TAT----ATATATAT--------------------------ATATATATA----CATA--------------T----------------ATAT-------------------------------------------------AT---------------------------------------A-TATAT--------------ATATATA---------------------------------------------TA------TAT----------------ACA-----------------------------------------------------CATATACCATATATATATATATAG-------------------------------------TAT-----------ATGCA-----TGCGG---ATG-----TGCGATAACGGC
droYak3 2L:14187098-14187298 + TAGTGCATAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGACAGTTTGGAAA--------------------------------------ATAGTTCTTCAT-----CA---------AC-----------------------------------CATTAATA----CACA-GTTTATACATATATGT----GT--AT-AT------------------------------TTACATG-----------------------------------GATATAT----ATGTGCAT--------------------------ACG------------TA--------------T----------------ATACTTCTT--TT---------------------------------------TAC------------AC-AGACAAACAAGTATATATATAAATAT---------ATA-TAT--------------------------------------------------------------------------------------A----------------------------------------------------GTATACTATGTAATAAATTATAA-------------------------------------AAG-----------AAA--------ATAT---TTG-----AAAC-AAATGAA
droEre2 scaffold_4770:7973552-7973745 + ATTTAAACCGA--------------------------------AAAAT----CTCG------CAA----------------------------------------------------------------------------------------------------------------------------TTTTGTCTCCAAAATGT------------------A----AATATTTATGG-C-------AAA-TTGT--------AGA-------------------------------G--T--TACACA-ACATACATATGTACAT----AC--AT-AC------------------------------------------A----TACATA-------------------CATACAT----ACATACAT--------------------------ACA------------TA--------------C----------------ATACATACA--TA---------------------------------------TAT---------------------------------------A-CATACAT------------A--TATACA-------------------------------------------TA------CAT----ACA--TATATGCATACATACATCGAAAA----------------------------------------------CCAAACG----------------------------------------------------------------------------------------------ATCTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ACATGAAGAACAAT-----------------AAG-----CCGAAGAAA----TCCA------------------------------------------AA--------TATCTAAATAATGCAACGG---------------------------------------------TAAATAAGACAACTCGAATTT-------------------------------G----ATTTTCA-TTC------------------AA----------------------------------------------------T------------TGCATACCTCAA-TAT----------------------------------------------ATA-----------------------TAT--------------------------------------------A------------TATATATATATATATATATATATATATATATATACA--TACA----------------------------TA-------------TATGCATACATATATATTTGATAAATA------------------------------------------------------------------------------------CGTT--------------------TATATACGTCTAT---------------------------------------AT----ATG--AAAGTGCCATGCAATCATTTTCAA-------------------------------------TTG-----------AAGAA-----AGTGA---GTA-----TAACACAATGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................CTCAA-TAT----------------------------------------------ATA-----------------------TAT--------------------------------------------A------------TATAT.......................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
droMoj3
ACATGAAGAACAAC-----------------AAG-----CCGAAGAAA----TCCA------------------------------------------AA--------TATCTAAATAATGCAACGG---------------------------------------------TAAATAAAACAACTCGAATTC-------------------------------G----ATTATCTAT----------------------------------------------------------------C--TATAA-AATATACATAT--GCAT----ATACA-TAT------------------------------------------A----TATGTATGTATAT-----------------------TCTC-TGT----TTGGATCATGATATATATGTATGTGTATGTA----TGTA------------TAT--------------ATTTG--TGTG----------------------------TA-------------TATATATTCATAGATATTTGATAAATA------------------------------------------------------------------------------------GA-T--------------------TATGTGCGT-------------------------------------------------ATGCAAATAC--ACTGCAAACATTTTTGCGTATAGAATATTGTAG---------------------G--------------T-AA-----AGTGT---ATA-----TGGGGCTATAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..ATGAAGAACAAC-----------------AAG-----CCGAAGAAA----TC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
droGri2
ATATGAAAAACAAT-----------------AAG-----CCGAAGAAA----TCCA------------------------------------------AA--------TATCTAAATAATGCAACGG---------------------------------------------TAAATAAGACAACTCGAATTT-------------------------------A----AT------TACATACTATTC---------AATTTTCAATTACAAT---------------------TATAC------------------------ATGCACATTTGAA-CAT----------------------------------------------ACA-------------------------------------TGTACGCAT-------------------------------AATATATA--------------T----------------------------ATGT-------------------------------------AC---------------------------------------A-TACAT--------------CTATGCG---------------------------------------------TG------TTT----ACATGTGTACATACATATTTG-CCAGGG----------------------------------------------CCATGACAACATTTTGAA---------------------------------AT-------------------------------------G---------AAGAAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACCAAAAAAACAAA------------------AA-----CCGAAGAAAGTATTTTA------------------------------------------AA--------AATTTA-------------------------------------------------------------------------------------------------------------------AATATATATACAT-------GAAGTACT--------ATATAT---------------ACAATATATTATAT------------------------ATACATATAT-----------------------------------------------------------------------------------TAT----ATATATAT--------------------------ATAGATATA----CATA--------------T----------------ATA-------------------------------------------------TAT---------------------------------------A-TATAT--------------ATATATG---------------------------------------------TA------TATACATA----TATATATGTCTATATA------------------------TTAATGGGGTATGGTAACGAACAAAAACACCGCACAATAATATACAA-------------------------------------AAA-----------AAA-A-----AATGA---CAA-----GGACAAAACGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
CCATAAAACAC--C-----------------AAT-----TCAAAATA-------CA-ATATACAAATATAATAATAATAATAATAATAA-----------------------TAACTAGCATTCGTA-----------------------------------------------------CCAACCCGCCTCT-------------------------------A----CCT--------------------------AC-----------------------------------CT-----------------------------AC----CT-----AC-----------------------------------------------------------------ATACATACAT----ATATATATATAT--------------------------ATATATATG--------------------------------------------------------------------------TATATA----TA-----AAT----------------------------------------C-A--TAT----------ATA---------------------------------------------------TATATATC---A-------------------TAT-A-------------------------------CATATGT----AT---AGATCATATATATTATATATTC-------------------------------------ATTCA-------------------------------------------TTCATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................ATTCGTA-----------------------------------------------------CCAACCCGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
ACAAATAAAATAAA------------------G-AAAGC-------AA----GCA--AAA-----------------------------AACCAACAAAA-TACGAAATACACA--------------------------------------------------------------------------------------------AAAGGATAATGCTACGAAAATAAAATAACTGTTCAT-------TAATATTGC--T-------------AAACAAAACAAT----------TTA------------------TTT-------------------AT-----------------------------------------------------------------ATATATATAT----ATATATATATAT--------------------------ATATATATA----TATA--------------T--------------------------------------------------------A----TA-----TAT---------------------------------------G-TATATGTATAAA--------------TAT-------------------------------------------A------TAT----------GTATATGTATAT---------------------------------------AA----AT------AT---------------------------------------A---------------------------------------------------A---------TAAAAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................ATACACA--------------------------------------------------------------------------------------------AAAGGATAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
droAna3
AATGAACAAAATA------------------AAA-----CCATAATGA-------------GCA----------------------------------AG--------T---------------AAGAAAAAAATACGAAAATGAGAATCTTTATTATATAAATTATAC-------------AATTT----------------------------------------------------A------------------AA----------TC--AGATAAGCGAAT----------AT----A----CAT-------TAT----ATAT----AT----------------------------------------------------------------------------------------------------------------------------ATATATATA----TATA--------------T------------------------------------------ATACACGTACATATA--------------------------------------------------------------------------------------------------------------------------------------------------------CATCTACTTA------------------------TTATTTGTAAATAA----GT---AA------------------------------------------AGCATAAATTTTC--ATTTGAA----------------------------------------AACCCCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................ATTT----------------------------------------------------A------------------AA----------TC--AGATAAGCGAAT----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droBip1
AAATGAAGAGCATT-----------------ACG-----GGGAAG-------------------------------------------------------------------TAAGTAGTGCCACTG---------------------------------------------TCAAACGGTTGCCCGAGGATT-----------------------------------TATTAATTTTTTA------------------------------------------------------------------TTA-TATATATAT----ATTT----AT--GT-AT--------------------------------------ATATAT--GT--TTATGTATATGTATA-----------TGT----ATATGTAT--------------------------ATGTATATG----TATA--------------T----------------GTATATGTA-------------------------------------------T-----------------------------------------A-----T--------------GTATATG---------------------------------------------TATATGTATATGTATATGT----AT------A----------------------------------------------------------------TGTAT---------------------------------------AT-------------------------------------G---------TATATGTSizeHit CountTotal NormTotal
No Reads
droKik1
AAAAACAAAAATTC------------------A-AAAAA---AAA---------AA-ATT-----------------------------GACTGATAAAT-TAGCAA--------------------------------------------------------------------------TAATTT----T--------------AAG---------------------ACACCAGCATAC-------ATAAATCAA--TACCTACCTATCAA---------------------TACCT-----------------------------------------------------ACACA-----------------------------------------------------------------------------A-------------------------------AATATATG--------------T----------------------------ATGTATACATATACATACAAGTATATATATGAAT------------------------------------------------A-----TATATAT--------------ATAT--------------------------------------------------------------------------------AAAGC----------------------------------------------TTACGAT-------TCATGTGAAT---AAAAAGACTTATACATTTAT------AGTC-----------AATCATACTTA-A---TATTTA-----TA---ATACAATSizeHit CountTotal NormTotal
No Reads
droFic1
ACACAAAGAACTATTTAATTTATAGAAAACAAAA-----TCACAAGCA----ACCA------------------------------------------AA--------T---------------CTGACAAAAATATGCAAATACAAATTCAATTTACCCAAATCGTATGAAC-----------------------------------------------------------------------------------------------------AAATAACGCAAT----------CTT------------------TAT-------------------AT----------------------------------------------ACA-------------------------------------TA------------------------------TA------------TATATATA------TAT------------------------------------------ATATAAATATATATA----TATTTAT--------------------------------ATATATAAACAC---------AAGT----ATA---------------------------------------------------TATATGTG---A-------------------AGT-AC--------------------------------------------------------------ATATAAAG---------------------------------TT-------------------------------------A---------AATATAASizeHit CountTotal NormTotal
No Reads
droEle1
TGAAAATCAACAAG-----------------CAA-----CCGAAAATTGTAGCCTA------------------------------------------AAT-------TACCAAAACAAAACAAAAC---------------------------------------------GAAACAAAACAATATA------------------------------------------T---T-------------------------------TGTAT---------------GTCATATATTATATATA----CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------AATACATA------TACATATAC------------------------------------ATACACATATACATATATATATAGAT------------------------------------------------A-----TATATAT--------------ATATATACTGGAGCCTTGTTCCTGCTGGGCCAATTACAAGGACACA--------------------TATATATTTCTAT---------------------------------------AG----GC------------------------A-------------------------------------AATTG-----------AAGGTACCAC-A---GGAAGCAACCACAACAGAAAGCASizeHit CountTotal NormTotal
No Reads
droRho1
TAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTCGAAAA-----------------------------------------ATTTTTTGTATATATC---------TATATATGTATATACA---------------------TATAT------------------------ATGTATATAT---------------------------------------------------------------------GTA-----------TAT----ATGTATAT--------------------------ATGTATATA----TGTA--------------T----------------ATAT-------------------------------------------------GT---------------------------------------A-TATAT--------------GTATATA---------------------------------------------TG------TAT----ATATGTATATATGT------------------------------------------------------------------------------------------------------------------------------------------------------A---------TATATGTSizeHit CountTotal NormTotal
No Reads
droBia1
ATATATATAAAGAT-----------------AAG-----ACAAAGGCA----TATA------------------------------------------CA--------TACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC----AT-----ACATATAAATATATATATACATATATATATATTTATTTATTTAAATATATA-------------------------------------TA------------------------------TA------------TATATTTA------TTT------------------------ATTTA------------------AATATATATA----TATTTAT--------------------------------TTATTTAAATAT---------ATA-TATA------------------------------------------------------TATATTTATTTAAATATAT----AT----------------------------------------------------------------------AAATAT---------------------------------------AT-------------------------------------A---------TATATATSizeHit CountTotal NormTotal
No Reads
droTak1
ATCAAAAAAAATAT------------------AA-----TGAAAGTAA----ATAA------------------------------------------TA--------TGTCTAATTAA-ATAAAAA---------------------------------------------TAAATC----------------------------GTAGGATGATCTAGACATGGTATATTAATCCTTCA------------------T----------------------------------------------------T------------TATATATATAAA-TAT----------------------------------------------ATA-----------------------AAT--------------------------------------------A------------TATATATATATATAAATATATATAAA-----------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------A----TATAAATATACAGT-ATCTAAAACCATAATATTTCTGATTTCAATGAG--------------------------------------G---------------------------------TC-------------------------------------A---------TATAAGTSizeHit CountTotal NormTotal
No Reads
droEug1
ATGAAAAACAAATT------------------G-AAAGCGAAAAAAT--GAG---A----------------------------------------AAAA--------TAAAAATATAAAAACACAA---------------------------------------------TAAA------------------------------------------------------T-TACATTTTAT-----GT---------AC-----------------------------------CTTT--------------------T-------------------AC-----------------------------------------------------------------ATATATATAT----ATATGTATATAT--------------------------ATATATATA--------------------------------------------------------------------------TATATA----TA-----ACT---------------------------------------G-TGTATATATAAA--------------TATATATTACACAC---------------AAAACACAC--ACACA--------------------CACACACTACTAT---------------------------------------GT----ATA--GAAACAA-----------------------------AACGTTTAAATATATATTTTT--TTTCAAAATT-----TATGAT-----AATGG---AAA-----TTATACAATAAASizeHit CountTotal NormTotal
No Reads
dm3
AACAATAAATCTAT------------------G------------CAA----AAACAATTTGCAAATTGCACAA--------------------GTAAAA--------TACAAA----------------------------TGG------------------------------------GGACTTCTATAT-------------------------------A----AT------AATAGA--------------------------------------------------------------------TGTAT----------AT----AT-----AATTATCAATATCTGTGTGTGTGTATATATATTTATATATATATATATATA-------------------------------------CA------------------------------TA------------TA--------------T----------------ATATTTCTCTCTC------------------TCTATACATA----TATATAT--------------------------------ATATATAGGTGT---------GTA-TAT---------------------------------------------------------------------------------------------------------------------------------------C--AATTT------------------------------------------------------ATTTGGCCATTATCTAGGTATATTTA-A---ATACGAG-----T---GTACAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--------------------------------ATATATAGGTGT---------GT................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTATATTTA-A---ATACGG.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--------------------------------ATATATAGGTGT---------..................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TATTTATATATATATATATATA-------------------------------------CA------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTTATATATATATATATATA-------------------------------------CA------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................2260.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATACATA----TATATAT--------------------------------ATATA..................................................................................................................................................................................................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ATATATATATA-------------------------------------CA------------------------------TA------------TA--------------T----------------ATA........................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATATATATATATATA-------------------------------------CA------------------------------TA------------............................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TATTTATATATATATATATATA-------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droSim2
AATATGCTAA---------------------------------ACAAC----CACA------------------------------------------AA--------TATT--AAGAATATTTAAG---------------------------------------------CAAATGATACAATTT----TT-------------------------------G----AATTTTTGTCCAT-------AAGTTACAA--TTCTCACACATCAT---------------------TTTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------TA------------------------------AG------------TATATATA------TAT------------------------------------------ATTCGTATATATATA----TATATAT--------------------------------ATATCTAGACAT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAAATCCTTGAACTTC-------------------------------------AATTG-----------ATGATTTTAA-A---CGAAGAA-----A----ACATAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACAT---------AAA--------------------------TATTGTCGATGTCGGA.....................................................................................................................................................................................................................26117.001700000085202000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGC............................................................................................................2717.00700000051100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---A................................................................................................................2617.00700000001105000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----......................................................................................................................2916.00600000042000000000
.........................................................................................................................................................................................................................................................................................................TTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------TA------------------------------AA------------............................................................................................................................................................................................................................................................................................................................................................................................................2615.00500000000110030000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGACAT---------AAA--------------------------TATTGTCGATGTCGGA.....................................................................................................................................................................................................................2814.00400000031000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAA.............................................................................................................................2614.00400000021001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GA...............................................................................................................................2013.00300200010000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGAACTTC-------------------------------------AATTG-----------ATGATTT...............................2413.00300000000300000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---A................................................................................................................2513.00300000001011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAT---------AAA--------------------------TATTGTCGATGTC........................................................................................................................................................................................................................2112.00200200000000000000
........................................................................................................................................................................................................................................................................................................TTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GA...............................................................................................................................2512.00201000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGC............................................................................................................2612.00200000011000000000
........................................................................................................................................................................................................................................................................................................TTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------TA------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000000020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGA----TG---AAAGCGCAAATCCTTGAACT.............................................................................................2712.00200000001100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TA---.................................................................................................................2112.00220000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAAATC.....................................................................................................2712.00200000011000000000
.....................................................................................................................................................................................................................................................................TCTCACACATCAT---------------------TTTTC------------------------TTGGAAGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200020000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAAATCCT...................................................................................................2612.00200010001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---.................................................................................................................2512.00200000011000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACAT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GA...............................................................................................................................3012.00200000011000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GA...............................................................................................................................2412.00200000002000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGA----TG---AAAGCGCAAATCCTTGAA...............................................................................................2512.00200000011000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----T.....................................................................................................................2812.00202000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCGATGTCGGATC----------------------------------------------------------------------------------GA...............................................................................................................................1912.00210100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----......................................................................................................................2512.00200000011000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCA.........................................................................................................2612.00200000010001000000
......................................................................................................................................................................................................................................................................CTCACACATCAT---------------------TTTTC------------------------TTGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.......TAA---------------------------------ACAAC----CACA------------------------------------------AA--------TATT--AAGAATAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..............................................................................................................................................................................................................................................................................TCAT---------------------TTTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG-----------ATGATTTTAA-A---CGAAGA.................2211.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGC............................................................................................................3011.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTG-----------ATGATTTTAA-A---CGAAGA.................2111.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGC..........................................................................................................2911.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------TA------------------------------AG------------TA..........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------AAA--------------------------TATTGTCGATGTCGGA.....................................................................................................................................................................................................................2011.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCG...........................................................................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----......................................................................................................................2611.00100000010000000000
..TATGCTAA---------------------------------ACAAC----CACA------------------------------------------AA--------TATT--AAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.........................................................................................................................................................................................................................................TTTGTCCAT-------AAGTTACAA--TTCTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAAATCC....................................................................................................2711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCGCAAATCCTTGAACTT............................................................................................2111.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGA----TG---AAAGCGCAAATCCTT..................................................................................................2311.00100000000001000000
......................................................................................................................................................................................................................................ATTTTTGTCCAT-------AAGTTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------------------AATTG-----------ATGATTTTAA-A---CGAAGAA-----A----ACA...2811.00100000001000000000
....TGCTAA---------------------------------ACAAC----CACA------------------------------------------AA--------TATT--AAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---.................................................................................................................2411.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-------------------------------------AATTG-----------ATGATTTTAA-A---CGAAGA.................2511.00100000001000000000
......................................................................................................................................................................................................................................ATTTTTGTCCAT-------AAGTTACAA--TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------------------------------------AATTG-----------ATGATTTTAA-A---CGAAGAA-----A----AC....2811.00100000000001000000
.........................................................................................................................TTTAAG---------------------------------------------CAAATGATACAATTT----TT-------------------------------G----AATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..............................................................................................................................................................................................................................................................................TCAT---------------------TTTTC------------------------TTGGAAGTCTTAA-TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
..............................................................................................................................................................................................................................................................................TCAT---------------------TTTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATCCTTGAACTTC-------------------------------------A.....................................................1911.00100010000000000000
.........................................................................................................................TTTAAG---------------------------------------------CAAATGATACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------.................................................................................................................................2311.00101000000000000000
................................................................................................................................................................................TGATACAATTT----TT-------------------------------G----AATTTTTGTCCAT-------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...........................................................................................................................................................................................................................................TGTCCAT-------AAGTTACAA--TTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGCAAATCCTTGAACTTC-------------------------------------AAT...................................................2411.00100010000000000000
................................................................................................................................................................................................T-------------------------------G----AATTTTTGTCCAT-------AAGTTACAA--TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.............................................................................................................................................................................................................................................................................ATCAT---------------------TTTTC------------------------TTGGAAGTCTTAA-T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.................................................................................................................................................................................................................................................................................T---------------------TTTTC------------------------TTGGAAGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCGATGTCGGATC----------------------------------------------------------------------------------GAA..............................................................................................................................1911.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------.................................................................................................................................2411.00101000000000000000
...................................................................................................................................................................................TACAATTT----TT-------------------------------G----AATTTTTGTCCAT-------AAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----TG---AAAGCGCAAATCCTTGAACTT............................................................................................2511.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT---------AAA--------------------------TATTGTCGATGTCGGAT....................................................................................................................................................................................................................2411.00110000000000000000
........................................................................................................................................................................................................................................................................................................TTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------TA------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAAC............................................................................................................................2611.00100010000000000000
.................................................................................................................................................................................................................................................T-------AAGTTACAA--TTCTCACACATCAT---------------------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AAAGCGCAAATCCTTG.................................................................................................1711.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCGGATC----------------------------------------------------------------------------------GAAACGA----T.....................................................................................................................1911.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAA........................................................................................................2611.00100000010000000000
..TATGCTAA---------------------------------ACAAC----CACA------------------------------------------AA--------TA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTGAACTTC-------------------------------------AATTG-----------ATGATTTT..............................2511.00100000000010000000
......................................................................................................................................................................................................................................................................CTCACACATCAT---------------------TTTTC------------------------TTGGAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGACAT---------AAA--------------------------TATTGTCGATG..........................................................................................................................................................................................................................2311.00100001000000000000
.................................................................................................................................................................................................................................................................................T---------------------TTTTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAAATCCTT..................................................................................................2611.00100000001000000000
.....................................................................................................................................................................................................................................................................TCTCACACATCAT---------------------TTTTC------------------------TTGGAAGTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------TATTGTCGATGTCGGAT....................................................................................................................................................................................................................1811.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCG...........................................................................................................2111.00101000000000000000
.........................................................................................................................................................................................TT----TT-------------------------------G----AATTTTTGTCCAT-------AAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---A................................................................................................................1911.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TATATAT--------------------------------ATATCTAGACAT---------AAA--------------------------TATTGT...............................................................................................................................................................................................................................2911.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACG...........................................................................................................................2111.00100000000001000000
.........................................................................................................................TTTAAG---------------------------------------------CAAATGATACAATTT----TT-------------------------------G----A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AA...............................................................................................................2611.00100000000010000000
........................................................................................................................................................................................................................................TTTTGTCCAT-------AAGTTACAA--TTCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAAC............................................................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TG---AAAGCGCAAATCCTTGA................................................................................................2011.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCA.........................................................................................................2511.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGC............................................................................................................2411.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------AAA--------------------------TATTGTCGATGTCGGAT....................................................................................................................................................................................................................2211.00100010000000000000
.............................................................................................................................................................................................................................................................TACAA--TTCTCACACATCAT---------------------TTTTC------------------------TTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGTCGGATC----------------------------------------------------------------------------------GAAA.............................................................................................................................1911.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA----TG---AAAGCGCAAATCCTTGAACTT............................................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------AAA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GG...............................................................................................................................2511.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------------------------------------AATTG-----------ATGATTTTAA-A---CGA....................2111.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------ATGATTTTAA-A---CGAAGAA-----A----ACATA.2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGC..........................................................................................................2311.00100000001000000000
.........................................................................................................................................................................................................................................................................ACACATCAT---------------------TTTTC------------------------TTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------TATTGTCGATGTCGGATC----------------------------------------------------------------------------------GA...............................................................................................................................2211.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------------------------------------GAAACGA----TG---AAAGCGCAAATCA....................................................................................................2411.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT--------------------------------ATATCTAGACAT---------AAT--------------------------.....................................................................................................................................................................................................................................2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGA----TG---AAAGCGCA.........................................................................................................1711.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAAATCCTTGAACTTC-------------------------------------AATTG-----------A.....................................2611.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----......................................................................................................................1911.00100000010000000000
..............................................................................................................TT--AAGAATATTTAAG---------------------------------------------CAAATGATACAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATGTCGGATC----------------------------------------------------------------------------------GAAACGA----TG---AAAGC............................................................................................................2811.00100000010000000000
.............................................................................................................................................................................................................................................................................ATCAT---------------------TTTTC------------------------TTGGAAGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------AAA--------------------------TATTGTCGATGTCGGA.....................................................................................................................................................................................................................2111.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------AAA--------------------------TATTGTCGATGTC........................................................................................................................................................................................................................1811.00101000000000000000
.........................................................................................................................................................................................................................................................................................................TTC------------------------TTGGAAGTCTTAA-TAT----------------------------------------------ACA-------------------------------------TA------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
............................................................................................................................................................................................................................................................................CATCAT---------------------TTTTC------------------------TTGGAAGTCTTAA-T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAAC............................................................................................................................2111.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----------ATGATTTTAA-A---CGAAGAA-----A----ACAT..2511.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCGATGTCGGATC----------------------------------------------------------------------------------GAAT.............................................................................................................................2111.00100000000000001000
................................................................................................................................................................................TGATACAATTT----TT-------------------------------G----AATTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACAT---------AAA--------------------------TATTGTCGATGTCGGA.....................................................................................................................................................................................................................2511.00100000010000000000
droSec2
AGCGGCAAATCAAA-----------------CAG-----CCAGAAAT--GAGCTTA------------------------------------------AA--------CGCAAACAAACAGCAACAT---------------------------------------------TAAATTAAGT------------------------------------------------------ATACAT------------------------------------------------------------CTCCATTA-TATATATAT----ATAT----AT--AT-AT--------------------------------------ATATAT--AC--ATATGTATATATATA-----------TAT----ATATATAT--------------------------ATATATATA----CATA--------------T----------------ATAT-------------------------------------------------AT---------------------------------------A-TATAT--------------ATATATA---------------------------------------------TA------TAT----------------ACA-----------------------------------------------------CATATACCATATATATATATATAG-------------------------------------TAT-----------ATGCA-----TGCGG---ATG-----TGCGATAACGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TAGTGCATAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGACAGTTTGGAAA--------------------------------------ATAGTTCTTCAT-----CA---------AC-----------------------------------CATTAATA----CACA-GTTTATACATATATGT----GT--AT-AT------------------------------TTACATG-----------------------------------GATATAT----ATGTGCAT--------------------------ACG------------TA--------------T----------------ATACTTCTT--TT---------------------------------------TAC------------AC-AGACAAACAAGTATATATATAAATAT---------ATA-TAT--------------------------------------------------------------------------------------A----------------------------------------------------GTATACTATGTAATAAATTATAA-------------------------------------AAG-----------AAA--------ATAT---TTG-----AAAC-AAATGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................GACAGTTTGGAAA--------------------------------------ATAGTTCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
droEre2
ATTTAAACCGA--------------------------------AAAAT----CTCG------CAA----------------------------------------------------------------------------------------------------------------------------TTTTGTCTCCAAAATGT------------------A----AATATTTATGG-C-------AAA-TTGT--------AGA-------------------------------G--T--TACACA-ACATACATATGTACAT----AC--AT-AC------------------------------------------A----TACATA-------------------CATACAT----ACATACAT--------------------------ACA------------TA--------------C----------------ATACATACA--TA---------------------------------------TAT---------------------------------------A-CATACAT------------A--TATACA-------------------------------------------TA------CAT----ACA--TATATGCATACATACATCGAAAA----------------------------------------------CCAAACG----------------------------------------------------------------------------------------------ATCTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 10:38 PM