ID:

dvi_12863

 Coordinate:

scaffold_12970:2046053-2046203 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.6 -7.6 -7.4

Flybase annnotation

exon [dvir_GLEANR_4025:4]; CDS [Dvir\GJ19140-cds]; intron [Dvir\GJ19140-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_12472:19588-19605 +
  2. scaffold_12472:426646-426663 +
  3. scaffold_12822:2568348-2568365 +
  4. scaffold_12875:8754300-8754317 +
  5. scaffold_12875:14741032-14741049 +
  6. scaffold_12928:1349301-1349318 +
  7. scaffold_12928:5317943-5317960 +
  8. scaffold_12963:1697069-1697086 +
  9. scaffold_12963:5828303-5828320 +
  10. dvi_12863  scaffold_12970:2046100-2046117 +
  11. scaffold_12970:3016411-3016428 +
  12. scaffold_12970:4375415-4375432 +
  13. scaffold_12970:5596663-5596680 +
  14. scaffold_13042:2099589-2099606 +
  15. scaffold_13042:4127217-4127234 +
  16. scaffold_13047:13802215-13802232 +
  17. scaffold_13047:14056172-14056189 +
  18. scaffold_13049:7831589-7831606 +
  19. scaffold_13052:1626741-1626758 +
  20. scaffold_13246:1965552-1965569 +
  21. scaffold_12875:969888-969905 +
  22. scaffold_12875:2828211-2828228 +
  23. scaffold_13047:15928007-15928024 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCCCTACAGCATGAGGTATCTAAATCCAGCAATGCCTACACTTCGGCCAGGTGAGTTACCGCTCGTGTGCGTTAATTAGCGTCTATGCATGTGTGTGTGTGTGTGTGTGCGTCTGGTCGTGTTTGTGTGTGTGTGTGTGCTTAATTATATAGTTCTGATAAGCGTGCGCCAGAACATGACTCACTTGCGGGGGTCGCCATTTTGAAAGCCTGTATTCACCGCGAGTCACGCTCATGTGGCGCGGCGAGGCG
*************************************************************************************************...........(((.((.((((...(((((((...((....)).....)))))))...)))).))))).************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 V053
head
 M047
female body
 SRR060685
9xArg_0-2h_embryos_total
 V047
embryo
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060679
140x9_testes_total
 SRR060689
160x9_testes_total
 SRR060676
9xArg_ovaries_total
 GSM1528803
follicle cells		 SRR060665
9_females_carcasses_total
 SRR060678
9x140_testes_total
...CGACAGCATGAGTTCTCTAAA................................................................................................................................................................................................................................... 21 3 2 1.50 3 0 0 0 0 0 1 1 0 1 0 0 0 0 0
...CGACAGCATGAGTTCTCTAA.................................................................................................................................................................................................................................... 20 3 2 1.50 3 0 0 2 0 0 0 0 1 0 0 0 0 0 0
...............................ATGCCTACACTTCGGCCAGCATA..................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........ATGAGGAAGCTAAATCCAGCT............................................................................................................................................................................................................................ 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AATCCAGCAATGCCTACACTTCGGCCAG......................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................ATAGTTCTGATAAGCGTG..................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................ATATCGGTCTGATAAGCATG..................................................................................... 20 3 6 0.33 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0
...............................................................CGTGTGCGTTACATATCGTCT....................................................................................................................................................................... 21 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CGTCTATGCAAGTGTTTGGGT....................................................................................................................................................... 21 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGCCTCTATTGACCGCGAG.......................... 19 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................CGTCTATGCAAGTGTTTGGG........................................................................................................................................................ 20 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......AGCATGAGTTCTCTAAAGC................................................................................................................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................................AGATGGGTGACCGCTCGTG........................................................................................................................................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGTGTGTGTGTGCGTCTG........................................................................................................................................ 18 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................TGTGTGTGTGTGTGCGTCT......................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...CGACAGCATGAGTTCTCTA..................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................................TCGACATTTTGAAAGC.......................................... 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................GCATGTGTGTGTGTGTGTG.................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGGGATGTCGTACTCCATAGATTTAGGTCGTTACGGATGTGAAGCCGGTCCACTCAATGGCGAGCACACGCAATTAATCGCAGATACGTACACACACACACACACACACGCAGACCAGCACAAACACACACACACACACGAATTAATATATCAAGACTATTCGCACGCGGTCTTGTACTGAGTGAACGCCCCCAGCGGTAAAACTTTCGGACATAAGTGGCGCTCAGTGCGAGTACACCGCGCCGCTCCGC
*************************************************************************************...........(((.((.((((...(((((((...((....)).....)))))))...)))).))))).************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 SRR060685
9xArg_0-2h_embryos_total
 M027
male body		 SRR060667
160_females_carcasses_total
 V047
embryo
................................................................................................................................................................AGGCACGCGGGCTTGTACTG....................................................................... 20 3 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................................................................CTTTGGGACATGAGTGGC.............................. 18 2 11 0.09 1 0 1 0 0 0
...............................................................................................................................ACACACACACGCGAATTTATATAC.................................................................................................... 24 3 20 0.05 1 0 0 0 1 0
......................................................................................................................................................................GCGATCTTGTCCTGAATG................................................................... 18 3 20 0.05 1 0 0 1 0 0
..........................................................................................................................................CGAATTAATATAGTAATACTA............................................................................................ 21 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:2046003-2046253 + dvi_12863 GCCCTACAGCATGAGGTATCT--------AAA---------------------------------TCCAGCA-A----------TGCCTACACTTCGGCCAGGTGAGTTACC-----------GCTCGTGTGCGT------TAATTAGCG------TCTATGCATGTG--TGTGTGTGTGTGTGTGCGTCTGGTCGTGTTTGT------GTG--TGTGTGT----------GT-------------------GCTTAATT------------------------------A----TATAGT-------------------------------TCTGATAAGCGTGC-----------------------------G--------CCAGAACATGACTCACTT-------------------------------------------GCGGGGGTCGCCATTTTGAAA----------GCCTGTATTCACCGCGAGTCACGCTCATGTGGCG------C--GGCGAGGCG
droMoj3 scaffold_6359:3256251-3256439 + GCGCTCCAGAGCGAGGTGTCC--------AAA---------------------------------TCCAGCA-C----------CGCCTACACGTCAGCCAGGTGAGTTAGC-----------GTTCGCTC-GGC------TCATTAGCG------TTTT--------------------------------------------------------------------------------------------GCCAAATT------------------------------A----GTTGG----------------------------------CGATAAGCGTGT-----------------------------C--TGTTGGCC--ACGTTGAGTCAC-G-------------------------------------------GCGACGGCGGCCATTTTGAAT----------G----------CGGCCGGTCACGCTC----GATGGCGGCGA--CACGTGGCG
droGri2 scaffold_14906:1406135-1406367 + ATGCTTTG------------------------------------------CACGTGTGTGCGACC------------------GCATTCGTGTGTGG---------------------TGTGCGTAA--------------ATGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT--GTGTGTG--TGTGTGT----------GT-----------GAGTACTGATG----TTGAAAGTAATAGCCAGGCGGTGATTTAGTGT-------CTCCGTTGTTGTCTCACA---------------------------TGT----------------------------------------------TCA--AAT-T-------------------------------------------GAAATTGAA---------GTT----------G----------CA----GTCAAGATCATTTGACGCCCCTAATGAGCGAGGCG
droWil2 scf2_1100000004963:2128400-2128592 + ACAACCTG------------------------------------------TGTGT--------------------------------------------------------------------GTGTG------TGTGTGTGTGT----G--TGTGT----------G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGTGTGTGTGTGTGTGTGTGTGTG---TG-------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------TGA--CCATGACTAAA---GGCAGAGGTAGCAAATTACACAATGAAAGGGGATGACTCCTACCCACCATGAGCAT-----AAGCACTCGAGTGGC-------------------------------------------------
dp5 XR_group8:5822089-5822196 - CG------------------------------------------------------------------------------------------------------------------------------TGTGCGC------CTGT----GTGTGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGT------GTG--TTTGTGT----------GT----------------------------------------------------------------------------------G---------------------------TGTAGCCAAAACGCAGTGCCGACAGAATGCGCG----------C---------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_10:1827695-1827824 - TACACGC-------------------------------------------------------------------CGTCGGTGT-------CAATGGGAGA--------TC-------------GAGTATGAGCAT------GTGT----G--TGTGTGCGTGT----GCATGTGTGTGTGTGTGTGCGTGT------GCATGTGTGT--GTGTGTGTGCTT----------GT-------------------GCTTAATT------------------------------AGT--TACAGTATT----------TA---------------------------TGA-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:2762166-2762255 + GGTGA-----------------------------------------------------------------------------------------------------GTGTAT-----------GAGCGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396380:288075-288166 + CGTT--------------------------------------------------------------------------------------------------------------------------C--A----T------CGGT----GTGTGTGTGTGTGT----G--TGTGTGTGTGCGTACTTTTGTATTTGTATCTGT------GTG--TGTGTGT----------GT-----------AGATACTAAAT----T------------------------------T----TC-----------------TA---------------------------GTT-----------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302476:708717-708820 + GTGTGT---------------------------------------------------------------------------------------------------------------------GTGTG------TGTGTGTGTGT----G--TGTGT----------G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGTGTGAGTATATGTATATTTGTG---AG-------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------ACA---------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454050:621259-621367 - GCCATCAG-CGGG-------------------AGGCG----------TGG------------------------CACTGCCAC-------------------------TACT-----------CTGTCTCTG--TCT----GTGT----G--TG--TCTATGT--------GTGTGTGTGTTTGTGTGCGTGTTTGTGTGCGT------GTT--TGTGTGT----------GT---------GTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491013:602992-603162 + GCTCTCCGGTCTGTGGAATCC--------ATG---------------------------------CAGTGAAAA----------CATGTGTAATTGATCTGATTAAGTT-GCCTTTGCTCTGCGTGCCTCTGTCT------GTAT----C--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTG---------------------------T----------TG---------------------------GCCA-------TTCTGTTCTAGACATGTG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779514:495404-495492 - GTTAGT------------------------------------------------------------------------------------------------------TAGT-----------GTGTGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301760:297530-297628 - GTG---------------------------------------------------------------------------------------------------------------------------TGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------GT---------GTGTGT----------TG------------------------------T----TCTTGTTTT----------TC---------------------------TA-----------------------------------------------------------------------------------------------------------------------------------GGC-------------------------------------------------
droTak1 scf7180000415909:253784-253869 + GCCACG---------------------------------------------------------------------------------------------------------------------GCATGCGTGTGT------CAGTTAGCG------AGGGTGTGTGTG--TGTGTGTGTGTATGGGTGTGTGCTCCTGCATGT------GTG--AGCGTGT----------GT-------------GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409182:66554-66688 + CTCCAGC-------------------------------------------------------------------C--------AA-------------GT--------TC-------------GTGTATGTGTGT------TTGT----GTGTTTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT------GTG--TGTGTGT----------GT----------------------------------------------------------------------------------GTGAGCAATAAACTACTACTGATAACT------------------------------------------CAAGAACCGCACTTGCTT------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:3142005-3142143 + AG------------------------------------------------------------------------------------------------------------------------------TGTGCGT------GCGT----G------CGTGTGT----GTGTGTGCCTGTGTCTGTGTGTGT------GTGTGTGTGT--GTG--------T----------GT-----------CAGTTGGGCCTGAATA------------------------------ACTTATATAGC-------------------------------CTGGATAATTGAGT---------------------------------------------------AGATTGTGAACGGTTTGAAAGCTC-----------------------------------CAGCTTGAAA----------GCC-------------------------------------------------
droSim2 x:9685759-9685856 - GTGACT---------------------------------------------------------------------------------------------------------------------GCGAGTGTGGGT------GTGT----G--GGTGTGTGTGT--------GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGC----GT----G-------------CGTGTCGGCTCAATT------------------------------A----AA------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_4:1676927-1677053 + GTATTTAAA-----------------------AATTG----------TGA------------------------TGCTGCTGC-------TGCTGCAGCTGTGTGTGTGTGT-----------GTGTGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:20531786-20531960 + ACCATTCGGCACAGGGTGTTTAATCCGGG---AAGCTNNNNNNNNNNCAGCATTTGCC-------TCTTACA-C----------TTCTTGTTTGTGGAACAGGTGAAT---------------GTGCGTGTCTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGG----------T---------------------------T------------------------------G-----------------------TG---------------------------TGT-----------------------------GTC----CAACA---------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:19638713-19638802 - GTGAGGC-----------------------------------------------------------------------------------------------------GCCT-----------GTGTGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCCCTACAGCATGAGGTATCT--------AAA---------------------------------TCCAGCA-A----------TGCCTACACTTCGGCCAGGTGAGTTACC-----------GCTCGTGTGCGT------TAATTAGCG------TCTATGCATGTG--TGTGTGTGTGTGTGTGCGTCTGGTCGTGTTTGT------GTG--TGTGTGT----------GT-------------------GCTTAATT------------------------------A----TATAGT-------------------------------TCTGATAAGCGTGC-----------------------------G--------CCAGAACATGACTCACTT-------------------------------------------GCGGGGGTCGCCATTTTGAAA----------GCCTGTATTCACCGCGAGTCACGCTCATGTGGCG------C--GGCGAGGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................AA---------------------------------TCCAGCA-A----------TGCCTACACTTCGGCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................ATAGT-------------------------------TCTGATAAGCGTG.......................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................TGTGTGTGTGTGCGTCTG................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................TGTGTGTGTGTGTGCGTCT.................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................GCATGTG--TGTGTGTGTGTG..........................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
GCGCTCCAGAGCGAGGTGTCC--------AAA---------------------------------TCCAGCA-C----------CGCCTACACGTCAGCCAGGTGAGTTAGC-----------GTTCGCTC-GGC------TCATTAGCG------TTTT--------------------------------------------------------------------------------------------GCCAAATT------------------------------A----GTTGG----------------------------------CGATAAGCGTGT-----------------------------C--TGTTGGCC--ACGTTGAGTCAC-G-------------------------------------------GCGACGGCGGCCATTTTGAAT----------G----------CGGCCGGTCACGCTC----GATGGCGGCGA--CACGTGGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATGCTTTG------------------------------------------CACGTGTGTGCGACC------------------GCATTCGTGTGTGG---------------------TGTGCGTAA--------------ATGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT--GTGTGTG--TGTGTGT----------GT-----------GAGTACTGATG----TTGAAAGTAATAGCCAGGCGGTGATTTAGTGT-------CTCCGTTGTTGTCTCACA---------------------------TGT----------------------------------------------TCA--AAT-T-------------------------------------------GAAATTGAA---------GTT----------G----------CA----GTCAAGATCATTTGACGCCCCTAATGAGCGAGGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................TGTGTGTGTGTGTGTGTGTGTGTGT--G..................................................................................................................................................................................................................................................................................................................................26200.10202
droWil2
ACAACCTG------------------------------------------TGTGT--------------------------------------------------------------------GTGTG------TGTGTGTGTGT----G--TGTGT----------G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGTGTGTGTGTGTGTGTGTGTGTG---TG-------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------TGA--CCATGACTAAA---GGCAGAGGTAGCAAATTACACAATGAAAGGGGATGACTCCTACCCACCATGAGCAT-----AAGCACTCGAGTGGC-------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................T----G--TGTGT----------G--TGTGTGTGTGTGTGTGTG....................................................................................................................................................................................................................................................................................................................................................26200.6513000013
...................................................................................................................................................................................GTGTGTGTGTGTGTGTGT...........................................................................................................................................................................................................................................................................................................................................18200.15300003
dp5
CG------------------------------------------------------------------------------------------------------------------------------TGTGCGC------CTGT----GTGTGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGT------GTG--TTTGTGT----------GT----------------------------------------------------------------------------------G---------------------------TGTAGCCAAAACGCAGTGCCGACAGAATGCGCG----------C---------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................TGTGCGC------CTGT----GTGTGTGTGC.................................................................................................................................................................................................................................................................................................................................................................................21170.0610000001000
................................................................................................................................................................................................TCTGTGTGTGT------GTG--TTTGTG....................................................................................................................................................................................................................................................................................................................20170.0610100000000
......................................................................................................................................C------CTGT----GTGTGTGTGTGTGT----G--TGTG..................................................................................................................................................................................................................................................................................................................................................................24200.0510001000000
.................................................................................................................................................................................................CTGTGTGTGT------GTG--TTTGTG....................................................................................................................................................................................................................................................................................................................19200.0510100000000
..............................................................................................................................................................................................TGTCTGTGTGTGT------GTG--TTT.......................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
TACACGC-------------------------------------------------------------------CGTCGGTGT-------CAATGGGAGA--------TC-------------GAGTATGAGCAT------GTGT----G--TGTGTGCGTGT----GCATGTGTGTGTGTGTGTGCGTGT------GCATGTGTGT--GTGTGTGTGCTT----------GT-------------------GCTTAATT------------------------------AGT--TACAGTATT----------TA---------------------------TGA-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GGTGA-----------------------------------------------------------------------------------------------------GTGTAT-----------GAGCGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................GTGTAT-----------GAGCGTGTGTGT------G..................................................................................................................................................................................................................................................................................................................................................................................................1930.331100000
.....................................................................................................................................GT------GTGT----G--TGTGTGTGTGT----G--TG....................................................................................................................................................................................................................................................................................................................................................................21200.306000006
..............................................................................................................................................TGT----G--TGTGTGTGTGT----G--TGTG..................................................................................................................................................................................................................................................................................................................................................................20200.255000005
................................................................................................................................................T----G--TGTGTGTGTGT----G--TGTGTGTGT.............................................................................................................................................................................................................................................................................................................................................................23200.051000001
....................................................................................................................................TGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGT...............................................................................................................................................................................................................................................................................................................................................................27200.051100000
........................................................................................................................................................TGTGTGTGTGT----G--TGTGTGTGTGT...........................................................................................................................................................................................................................................................................................................................................................23200.051000001
droBip1
CGTT--------------------------------------------------------------------------------------------------------------------------C--A----T------CGGT----GTGTGTGTGTGTGT----G--TGTGTGTGTGCGTACTTTTGTATTTGTATCTGT------GTG--TGTGTGT----------GT-----------AGATACTAAAT----T------------------------------T----TC-----------------TA---------------------------GTT-----------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTGTGT---------------------------------------------------------------------------------------------------------------------GTGTG------TGTGTGTGTGT----G--TGTGT----------G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGTGTGAGTATATGTATATTTGTG---AG-------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------ACA---------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCCATCAG-CGGG-------------------AGGCG----------TGG------------------------CACTGCCAC-------------------------TACT-----------CTGTCTCTG--TCT----GTGT----G--TG--TCTATGT--------GTGTGTGTGTTTGTGTGCGTGTTTGTGTGCGT------GTT--TGTGTGT----------GT---------GTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCTCTCCGGTCTGTGGAATCC--------ATG---------------------------------CAGTGAAAA----------CATGTGTAATTGATCTGATTAAGTT-GCCTTTGCTCTGCGTGCCTCTGTCT------GTAT----C--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTG---------------------------T----------TG---------------------------GCCA-------TTCTGTTCTAGACATGTG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTTAGT------------------------------------------------------------------------------------------------------TAGT-----------GTGTGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GTG---------------------------------------------------------------------------------------------------------------------------TGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------GT---------GTGTGT----------TG------------------------------T----TCTTGTTTT----------TC---------------------------TA-----------------------------------------------------------------------------------------------------------------------------------GGC-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCCACG---------------------------------------------------------------------------------------------------------------------GCATGCGTGTGT------CAGTTAGCG------AGGGTGTGTGTG--TGTGTGTGTGTATGGGTGTGTGCTCCTGCATGT------GTG--AGCGTGT----------GT-------------GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTCCAGC-------------------------------------------------------------------C--------AA-------------GT--------TC-------------GTGTATGTGTGT------TTGT----GTGTTTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT------GTG--TGTGTGT----------GT----------------------------------------------------------------------------------GTGAGCAATAAACTACTACTGATAACT------------------------------------------CAAGAACCGCACTTGCTT------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AG------------------------------------------------------------------------------------------------------------------------------TGTGCGT------GCGT----G------CGTGTGT----GTGTGTGCCTGTGTCTGTGTGTGT------GTGTGTGTGT--GTG--------T----------GT-----------CAGTTGGGCCTGAATA------------------------------ACTTATATAGC-------------------------------CTGGATAATTGAGT---------------------------------------------------AGATTGTGAACGGTTTGAAAGCTC-----------------------------------CAGCTTGAAA----------GCC-------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................TGTGTCTGTGTGTGT------GTGTGT.....................................................................................................................................................................................................................................................................................................................................21203.9078000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010001100020301000000000000000000000000000000000000000000023000240000011000001000204010000010100000000100000040030010
.........................................................................................................................................................................................................GTGTGT--GTG--------T----------GT-----------CAGTTGGG....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................GT----G------CGTGTGT----GTGTGTGCCTGT.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TGTGTCTGTGTGTGT------GTGTG......................................................................................................................................................................................................................................................................................................................................20200.951900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012130000000000020000000000000001000000
................................................................................................................................................................................TGTGTCTGTGTGTGT------GTGT.......................................................................................................................................................................................................................................................................................................................................19200.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000100010000000000000000000000000000000000001000000000700010
................................................................................................................................TGTGCGT------GCGT----G------CGTGTGT----GTGTGT...................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................CGT------GCGT----G------CGTGTGT----GTG......................................................................................................................................................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000001000000000000100000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................GTGTGTGT------GTGTGTGTGT--GTG--------T----------GT-----------C...........................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000110000100000000000
..........................................................................................................................................................................................TGTGT------GTGTGTGTGT--GTG--------T----------GT-----------............................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
....................................................................................................................................CGT------GCGT----G------CGTGTGT----GTGTG....................................................................................................................................................................................................................................................................................................................................................................20130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000
....................................................................................................................................................................................TCTGTGTGTGT------GTGTGTGTGT--...............................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030
.........................................................................................................................................................................................GTGTGT------GTGTGTGTGT--GT.............................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000
................................................................................................................................................................................TGTGTCTGTGTGTGT------GTG........................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000
..................................................................................................................................................................................TGTCTGTGTGTGT------GTGTGT.....................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................T----G------CGTGTGT----GTGTGTGCC................................................................................................................................................................................................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................CGT----G------CGTGTGT----GTGTGTGC.................................................................................................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GT------GCGT----G------CGTGTGT----GTGTG....................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000
......................................................................................................................................T------GCGT----G------CGTGTGT----GTGTGT...................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100
....................................................................................................................................................................................TCTGTGTGTGT------GTGTGTGT...................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
.....................................................................................................................................GT------GCGT----G------CGTGTGT----GTGTGTG..................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGTGT------GTGTGTGTGT--GTG--------T----------GT-----------C...........................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TGTGTCTGTGTGTGT------GTGTGTGTG..................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010
..................................................................................................................................................................................TGTCTGTGTGTGT------GTGTG......................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TGTGTCTGTGTGTGT------GTGTGTGT...................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................GCGT------GCGT----G------CGTGTGT----GT.......................................................................................................................................................................................................................................................................................................................................................................18180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................TGT------GTGTGTGTGT--GTG--------T----------G........................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................GT------GCGT----G------CGTGTGT----GTGTGT...................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................TGTGTGTGT------GTGTGTGTGT--...............................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................T------GCGT----G------CGTGTGT----GTGTG....................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................TGTCTGTGTGTGT------GTGTGTG....................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................CGT----G------CGTGTGT----GTGTGTG..................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................TGTGTGT------GTGTGTGTGT--GTG--------T----------GT-----------C...........................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................GTGTCTGTGTGTGT------GTGT.......................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................................................................................................................................TGTCTGTGTGTGT------GTGTGTGTGT--GTG--------....................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACGGTTTGAAATTC............................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GT------GTGTGTGTGT--GTG--------T----------GT-----------............................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................GTCTGTGTGTGT------GTGTGTG....................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CTGTGTGTGT------GTGTGTGTGT--G..............................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................TGTCTGTGTGTGT------GTGTGTGT...................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................GTCTGTGTGTGT------GTGTGTGTGT--GTG--------T----------.........................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GTGACT---------------------------------------------------------------------------------------------------------------------GCGAGTGTGGGT------GTGT----G--GGTGTGTGTGT--------GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGC----GT----G-------------CGTGTCGGCTCAATT------------------------------A----AA------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................GTGTGGGT------GTGT----G--GGTGTGT.................................................................................................................................................................................................................................................................................................................................................................................20121.5018000018000000000000
......................................................................................................................................................................................................TGTGT------GTG--TGTGTGC----GT----G-------------...........................................................................................................................................................................................................................................................................................18200.25500000000005000000
........................................................................................................................................................GGTGTGTGTGT--------GTGTGTGTGTGTGTGT.....................................................................................................................................................................................................................................................................................................................................................27140.07101000000000000000
...............................................................................................................................GTGTGGGT------GTGT----G--GGTGTG..................................................................................................................................................................................................................................................................................................................................................................................19150.07100010000000000000
........................................................................................................................................................................................................TGT------GTG--TGTGTGC----GT----.........................................................................................................................................................................................................................................................................................................15200.05100000000001000000
................................................................................................................................................................TGT--------GTGTGTGTGTGTGTGT.....................................................................................................................................................................................................................................................................................................................................................19200.05100000001000000000
............................................................................................................................................................TGTGTGT--------GTGTGTGTGTG..........................................................................................................................................................................................................................................................................................................................................................18200.05100000000000100000
droSec2
GTATTTAAA-----------------------AATTG----------TGA------------------------TGCTGCTGC-------TGCTGCAGCTGTGTGTGTGTGT-----------GTGTGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................GT-----------GTGTGTGTGTGT------GTGT----G--TGTG....................................................................................................................................................................................................................................................................................................................................................................................23200.2040004
....................................................................................................................................TGT------GTGT----G--TGTGTGTGTGT----G--TG....................................................................................................................................................................................................................................................................................................................................................................22200.1530300
.......................................................................................................TGTGTGTGT-----------GTGTGTGTGTGT------GTGT----...........................................................................................................................................................................................................................................................................................................................................................................................25200.1530300
......................................................................................................................................T------GTGT----G--TGTGTGTGTGT----G--TGTG..................................................................................................................................................................................................................................................................................................................................................................22200.1530300
........................................................................................................................................................TGTGTGTGTGT----G--TGTGTGTGTGTG..........................................................................................................................................................................................................................................................................................................................................................24200.1530003
................................................................................................................................................T----G--TGTGTGTGTGT----G--TGTGTGTGTG............................................................................................................................................................................................................................................................................................................................................................24200.1530003
..............................................................................................................................................................TGTGT----G--TGTGTGTGTGTGTGTGTG....................................................................................................................................................................................................................................................................................................................................................24200.1530003
..........................................................................................................................................................TGTGTGTGT----G--TGTGTGTGTGTGTG........................................................................................................................................................................................................................................................................................................................................................24200.1530003
................................................................................................................................................................TGT----G--TGTGTGTGTGTGTGTGTGTG..................................................................................................................................................................................................................................................................................................................................................24200.1530003
............................................................................................................................................................TGTGTGT----G--TGTGTGTGTGTGTGTG......................................................................................................................................................................................................................................................................................................................................................24200.1530003
.......................................................................................................TGTGTGTGT-----------GTGTGTGTGTGT------GTG................................................................................................................................................................................................................................................................................................................................................................................................24200.1530300
.......................................................................................................TGTGTGTGT-----------GTGTGTGTGTGT------GTGT----G--........................................................................................................................................................................................................................................................................................................................................................................................26200.1530003
.............................................................................................................................................GTGT----G--TGTGTGTGTGT----G--TGTGTGTGT.............................................................................................................................................................................................................................................................................................................................................................26200.1020200
...............................................................................................................................................GT----G--TGTGTGTGTGT----G--TGTGTGTGTGT...........................................................................................................................................................................................................................................................................................................................................................26200.1020200
...............................................................................................................................................................GTGT----G--TGTGTGTGTGTGTGTGT.....................................................................................................................................................................................................................................................................................................................................................22200.1020200
...........................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGT...............................................................................................................................................................................................................................................................................................................................................22200.1020200
.....................................................................................................................................................G--TGTGTGTGTGT----G--TGTGTGTGTGTGT.........................................................................................................................................................................................................................................................................................................................................................26200.1020200
...........................................................................................................................................................................................GTGTGTGTGTGTGTGT------GTG--TGTGTG....................................................................................................................................................................................................................................................................................................................25200.1020002
.............................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGT.............................................................................................................................................................................................................................................................................................................................................22200.1020200
..................................................................................................................................................................................................TGTGTGTGT------GTG--TGTGTGT----------.........................................................................................................................................................................................................................................................................................................19200.1020002
.................................................................................................................................................................................................GTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TG.......................................................................................................................................................................................25200.1020002
.........................................................................................................................................................GTGTGTGTGT----G--TGTGTGTGTGTGTGT.......................................................................................................................................................................................................................................................................................................................................................26200.1020200
..........................................................................................................................................................................................TGTGTGTGTGTGTGTGT------GT.............................................................................................................................................................................................................................................................................................................................19200.1020002
........................................................................................................................................................................................TGTGTGTGTGTGTGTGTGT------...............................................................................................................................................................................................................................................................................................................................19200.1020002
....................................................................................................................................................................................................TGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------T.....................................................................................................................................................................................................................19200.1020002
..............................................................................................................................................................................................TGTGTGTGTGTGT------GTG--TGT.......................................................................................................................................................................................................................................................................................................................19200.1020002
................................................................................................................................................................................................TGTGTGTGTGT------GTG--TGTGT.....................................................................................................................................................................................................................................................................................................................19200.1020002
.................................................................................................................................................................GT----G--TGTGTGTGTGTGTGTGTGT...................................................................................................................................................................................................................................................................................................................................................22200.1020200
......................................................................................................................................................................................TGTGTGTGTGTGTGTGTGT.......................................................................................................................................................................................................................................................................................................................................19200.1020002
...................................................................................................................................................................................................GTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------25200.1020002
.............................................................................................................................................................................................GTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------......................................................................................................................................................................................................................25200.1020002
...............................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGT...........................................................................................................................................................................................................................................................................................................................................22200.1020200
............................................................................................................................................................................................TGTGTGTGTGTGTGT------GTG--T.........................................................................................................................................................................................................................................................................................................................19200.1020002
.................................................................................................................................................................................GTGTGTGTGTGTGTGTGTGTGT.........................................................................................................................................................................................................................................................................................................................................22200.1020200
.....................................................................................................................................GT------GTGT----G--TGTGTGTGTGT----G--TGTGTGT...............................................................................................................................................................................................................................................................................................................................................................26200.1020200
.......................................................................................................................................................................G--TGTGTGTGTGTGTGTGTGTGT.................................................................................................................................................................................................................................................................................................................................................22200.1020200
...............................................................................................................................................................................................GTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------.........................................................................................................................................................................................25200.1020002
..................................................................................................................................TGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGT.................................................................................................................................................................................................................................................................................................................................................................27200.0510100
....................................................................................................................................TGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGT...............................................................................................................................................................................................................................................................................................................................................................27200.0510100
................................................................................................................................TGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGT...................................................................................................................................................................................................................................................................................................................................................................27200.0510100
droYak3
ACCATTCGGCACAGGGTGTTTAATCCGGG---AAGCTNNNNNNNNNNCAGCATTTGCC-------TCTTACA-C----------TTCTTGTTTGTGGAACAGGTGAAT---------------GTGCGTGTCTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGG----------T---------------------------T------------------------------G-----------------------TG---------------------------TGT-----------------------------GTC----CAACA---------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GTGAGGC-----------------------------------------------------------------------------------------------------GCCT-----------GTGTGTGTGTGT------GTGT----G--TGTGTGTGTGT----G--TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT------GTG--TGTGTGT----------G----------------------------------------------------------------------------------TG---------------------------TGT-----------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 10:16 PM