ID:

dvi_12862

 Coordinate:

scaffold_12970:2045019-2045108 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.2 -8.1

Flybase annnotation

CDS [Dvir\GJ19140-cds]; exon [dvir_GLEANR_4025:3]; CDS [Dvir\GJ19140-cds]; exon [dvir_GLEANR_4025:4]; intron [Dvir\GJ19140-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------##################################################
TGCACGAGAGCACCGAGAAATGTGAGCAGCTGGAGGCACAGCTGAAGCTGGTCGAGGCGCAGCTGCGGGAGCTGAAACAAATGACCGAACAGTGCAGCGAAAGCGAGCTACTCAAAAAGAAGCTGGAGGCCAGGGAACAGGATTTGGAGGAGCTGCGCGACCAATTGCAATGCAGTCGGCTGGAATTGTT
**************************************************************************************......((...........((((.((.....)).)))).............)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M061
embryo
 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060655
9x160_testes_total
 SRR060683
160_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060657
140_testes_total
 V047
embryo
 SRR060666
160_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060662
9x160_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060684
140x9_0-2h_embryos_total
 GSM1528803
follicle cells		 V053
head
 SRR060669
160x9_females_carcasses_total
 M027
male body
.........................................................................................................................GCTGGAGGCCAGGGAACAG.................................................. 19 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........ACCGAGAAATGTGAGCAGCT............................................................................................................................................................... 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................TGGAGGCACAGCTGAAGCTGGT.......................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................AGCTGGAGGCAAGGGGACA................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ATTGCAATGCAGTCGGCTGGAATTTTT 27 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GGAAAAGGATTTGGAGGA....................................... 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GAACAGTGCAGCGAAAGCGAGCTACTC............................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................CAGGGAACAGGATTTGGAGGAGCTGCGC................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TGCAATGCTGTCAGCTGGAATTGTT 25 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................GGATTTGGAGGAGCTGCGC................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................CGAGGCGCAGCTGCGGGA........................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................GGCACAGCTGAAGCTGGTCGAGGCGC.................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................GCTGAAGCTGGTCGAGGCGC.................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GTGAGCAGCTGGAGGCACAGC.................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................GCACAGCTGAAGCTGGTCG........................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........GCACCGAGAAATGTGAGC................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GGCGCAGCTGCGGGAGCTG.................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TGCACGAGAGCACCGAGAAA.......................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................GAAGCTGGTCGAGGCGCAGCT.............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AGAGCACCGAGAAATGTGAGC................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GAACAGTGCAGCGAAAGCGAGCTAC............................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GCACGAGAGCACCGAGAAATGTGA..................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GAACAGGATTTGAAGGAGC..................................... 19 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................TCTGAAGCTGGTCGAGGCGC.................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......GAGCACCGAGAAATGTGAGCAGC................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GAAATGTGAGCAGCTGGAGGCACAGC.................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................AAGCTGGAGGCAAGGGGACAGA................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................CTGGAGGCACAGCTGAAGCT............................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TGAAGCTGGTCGAGGCGCAGC............................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTGCAGAAGATGAAACAAAT............................................................................................................ 20 3 20 0.95 19 1 0 0 0 0 0 2 0 0 0 3 1 1 0 0 9 0 0 0 0 2 0
........................................................................TGAAACAAAAGACGGAACAGT................................................................................................. 21 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGCGGAAGATGAAACAAATTAC......................................................................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ATTGCAATGCTGTCAGCTGGAATT... 24 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATTGGGAGGAGCTCCGCCAC............................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...ACGAGAGGACCGGGA............................................................................................................................................................................ 15 2 20 0.25 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0
.................................AGGCACAGCTGAAGGTAGT.......................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................GGCCAGGGAACAAGAGTT............................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................GCTGGAGGCAAGGGGACAGA................................................. 20 3 11 0.18 2 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................AGTGCAGCGAAAGCGAGTC................................................................................. 19 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................ATTGGGAGGATCTGCGCG............................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.GGACGAGAGGACCGAGA............................................................................................................................................................................ 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................AGCTGAAGCAGGTCGCGG..................................................................................................................................... 18 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGCGGAAGATGAAACAAATTA.......................................................................................................... 21 3 9 0.11 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GAAAAGGATTTGGAGGAGA..................................... 19 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTGCAGGAGATGAAACAAATT........................................................................................................... 21 3 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................GGATTTGGTGAAGCTGCGAG............................... 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................GGCGCAGCGAAAGCGAGC.................................................................................. 18 2 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TGACGGAGCTGCGCGACC............................ 18 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACGTGCTCTCGTGGCTCTTTACACTCGTCGACCTCCGTGTCGACTTCGACCAGCTCCGCGTCGACGCCCTCGACTTTGTTTACTGGCTTGTCACGTCGCTTTCGCTCGATGAGTTTTTCTTCGACCTCCGGTCCCTTGTCCTAAACCTCCTCGACGCGCTGGTTAACGTTACGTCAGCCGACCTTAACAA
**************************************************......((...........((((.((.....)).)))).............)).************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
..........................................................................................................................................................CGGGCTGATTAAGGTTACGTC............... 21 3 3 0.33 1 1 0
......................................................................................................................................................TCGACGGGCTCGTTAGCGTTA................... 21 3 7 0.14 1 0 1
.......................................................................................................................................................CGACGGGCTCGTTAGCGTTA................... 20 3 11 0.09 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:2044969-2045158 + dvi_12862 TGCACGAGAGCACCGAGAA-AT--------GT--------------------------GAGCAGCTGGAGGCACAGCTGAAGCTGGTCGAGGCGCAGCTGCGGGAGCTGAAACAAATGACCGAACAGTG---------------------------------------------------------------------------------------------------------------------------------------CAGCGAAAG-------------------------------------CG---------------------------------------AGCTACTCAAAAAGAAGCTGGAG----------------GCCAGGGAACAGGATTTGGAGGA------------------------------------------GCTGCGCGACCAATTGCAATGCAGTCGGCTG------------GAATTGTT
droMoj3 scaffold_6359:3255271-3255409 + TGCACGAGAGCACAGAGAG-AG--------GC--------------------------GAGGAGCTGGAGGCGCAGCTGAA------------------------------------------------------------------------GAAATTGCTGGA---------------------------------------------------------------------------------------------GCAGTCCAACGACAT---CACAGAAGCC--------------------------------------------------------------------------------------------------------------GAGCAGCAGCTGGAGGA------------------------------------------ATTGCGCGAGCAATTGCAGGCGAGCGACCTT------------CAGCTGCT
droGri2 scaffold_14853:6955362-6955500 - TGCAGGCGAGCACCGAGCA-CA--------GC--------------------------GAGCAGCTGCAGGCAAACGAGCTGGTGC------------------------------------------------------------------------TCTTGGA---------------------------------------------------------GCGGATGCGGTG------------------------------------CAC---CGATCAACTG--------------------------------------------------------------------------------------------------------------AAGTCCGAGCTGGAGGC------------------------------------------GCTGCAGGAGGAAATGAAACGCAGGCAGTTG------------GAGCTCGC
droWil2 scf2_1100000004902:9547655-9547734 - TGCAGCAGCAGCACCAGCAGCA---------G--------------------------CAACAGCAGCAGCAACAATTGCAGTTGGTT------------------------------------------------------------------------------------------------------------------------CAATTGCAGCAACAGCAGCAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-----------------------AA
dp5 XL_group1a:973694-973874 + TGGGAGGGAGAGAC--------------------------------------------------------------------------------------------TATGAGCAGATCTTTG------------------------------------------------------------------------------------AGCTGGAGAGGCTCACAGAACAGATCCAGGCCAAGGAAGAGCAGCTGGAGAAGCAGGCCACTGATCTGG----------------------------------------------------------------------------AGCAGCTCACAGAACAGGTCCAG----------------GCCAAGGAAGAGCAGCTGAAGAA------------------------------------------GCAG---------------GCCACTGATCTGGAGCAGCTCACAGAACAGGT
droPer2 scaffold_2:2167470-2167683 - TGCAGGAGCAGCTCGAGGA-GG--------AT------------GAGGAGGCCAAGCG--TAACTTTGAGCGCA---------------------------------------AGCTGGCCGA-GGTCACCGGCCAGATGCAGGAGATCAAGAAGA------------------------------------------------------------------------------------------------------------------------------------------AGGCTGAGGAGGATGCCGACCTGGCCAAG---------GAGCTGGAGGAGGGCAAGAAGCGGCTCAACAAGGAGATCGAG----------------GTGTTGGAGCGACAGGTGAAGGA------------------------------------------GCTGATTGCCCA------GAACGAT------------------CGCCTGGA
droAna3 scaffold_12929:2902224-2902427 - GAGGA-----CGCCCGGCT-GC--------GTCTGGAGGTGGCCCTCCAGGCCCAGCG--GGAGCTGCAGGAGGAGCTGGC------------------GAGAGAG----------------------TCCTC-----CGAGCC------------------------------------------------------------GGACAGTGACGAGCTCAAGGAGCTCCTTTCCGCCACAAG-------------------------------------------AAGCAAGCTGGAGAAGGCCGAAGCCCAGCTGGCGGAGAGCCAGGAC-------------------------------------------------------------------------CTGGAGGA------------------------------------------GATGCTGGCC--AACACAAAACAGGAAC---------------------TT
droKik1 scf7180000302696:757639-757791 + TATCAGAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCCAGCGCTTGGAGGATAGAACCAACCAGCTGAA----------GGCCAGCGAGGATCAGCACAAGGTCCAACTGACCAAGCTCCAAGGCCAGATGCAGGCGGACCAGGAGCGCCTAAGGGAACTCCTCCAAGTGCAGGACAAGCTGG-------------------------------------------------------------------------------------------AG------C----------------
droFic1 scf7180000454038:643096-643234 + TAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCGTCACAAAGGAATTGGAGGAGAAGTCCGTTCAGGCAAA----------GATCATCCAGGATCAGCACAAAATCCAGTTGGCAAAAATCCAAAACCAATTGCAGGCGGATCAGGAGAAGCTCAGGGAGCAGCTGCAG-------------------------------------------------------------------------------------------------------------------------------CTGCA
droEle1 scf7180000491023:1182945-1183197 - TGCGCGAACTGCTCCAGCTGCAGGACAAGTTG--------------------------GAGCAGCAGAAGGAACTGATGGAGGTGGAT---------------------------------------------------------------------------------------------------------------------------------CAGAACCAGCAGCTGAGCGCCATCAAAAGGCAGCTGGCCGAGGTCACCACTCAACTGGA----------GGAGTGTCGGGAGCAGCTAAACGACCGGGAAGC----------------------------------------------------------------------------------GCAACTATCGAAGCTGCAACAGCAATGCCAAGAGGTCAGCGAGGAGAGGACAAGGCTGCAGGAGCAACTGCAAAGCAGGGAG------CAGTCAATGGACCTGGA
droBia1 scf7180000302041:33669-33891 + TGCGTGAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCCGCCGCAGGGAGGAGGATCTGAAGAGTCTGGAGGAGCAACTAACCTCCATCAAACAGGAGCTGGAGGAGAAGAGCAGTCAGCTAAA----------GACCAGCCAAGAGCAGCACAAAATCCAGTTGGCCAAAATTCAAAATCAGCTGCAGGCCGACCAGGAGAGGCTGAGGGAGCAGCTCCAATTGCAGGACAAGTTGG-------------------------------------------------------------------------------------------AG------CAGCAGAAGGAGCTGAT
droTak1 scf7180000414432:169532-169664 + TCACG-AGGAGACCA---------------TT--------------------------GTGCAGCTGGAGGCGCAGCTGGAGGAGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGGGAGG-----------------------------CACAGGATAAGACTAAACTCCTGGCG------------------------AGGAATGAGGAGAAGCTGGGAGAGCTGCTCCA-------------------------------------------------------------------------------------------GAAAATGCAAGGCAAGGAG-----------------------
droEug1 scf7180000409533:548563-548755 + TGCGGGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGCAGCACAAGGAAGCGGAGCTGAAGAGTCTGGAGGAGCAGCTGACCTCCGTTAGGCAGGAACTGGAAGAGAAGTCCATTCAAATAAA----------GATCAACCAGGATCAGCACAAACTCCAGCTGACCAAAATCCAAAATCAACTGCAAGCCGATCAGGAGAAGCTGAGGGAGCAGCTCCAG-------------------------------------------------------------------------------------------------------------------------------CTGCA
dm3 chrX:15399318-15399534 + TGCTGGAGAGGAAT--------------------------------------------------------------------------------------------GGGGAACAGCTGACTAAACAGCAGCAGCAAAATCAGGCAGATCAAAAGAAATTGGAAGAACTTTCACAACTGCGGGAGACATTGCAACGTAGGGATGAGGACCTAAAGGAGCTGGAAGAGCAATTAAGCGCCGTTAGACAGGATCTAGATGAGAAGTCCATTCAGATGAA----------GATCAGTCAGGATCAGCACAAACTCCAGTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:14564677-14564893 + TGCTGGAGAGGAAT--------------------------------------------------------------------------------------------GGGGAACAGCTGACTAAACAGCAGCAGCAAAATCAGGCAGATCAAAAGAAATTGGAAGAACTTTCACAACTGCGGGAAACATTGCAACGCAGGGATGAGGACCTAAAGCAGCTGGAGGAGCAATTAAGCTCCGTTAGGCAGGATCTAGATGAGAAGTCCATTCAGATGAA----------GAACAGTCAGGATCAGCACAAACTCCAGTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_73:133867-134057 + TGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGGGATGAGGACCTAAAGCAGCTGGAGGAGCAATTAAGCTCCGTTAGGCAGGATCTAGATGAGAAGTCCATTCAGATGAA----------GATCAATCAGGATCAGCACAAGCTCCAGTTGGCCAATCTCCAAAATCAGTTGCAAGCCGATCAGGAGAAGCTAAGAGAACTGCTCCAGC----------------------------------------------------------------------------------------------TGCAGGACAAAC-----------------------TG
droYak3 X:9584996-9585210 + TGGACAATAGCACCAAACTGCT---------G--------------------------GAAAAGAAT---------------------------------------GCAGAACAGCTGACCAAACAGCAGCAGCAAAACGCGTCAGATCAAAAGAAATTGGAAGAACTCTCACACCTGCGGGAAACATTACAACGCAAGGAAGTGGATCTAATGGAGCTGGAGGAGCAATTAGCCTCGGTTAGGCAGGATCTAGATGAGAAATCCGTTCAGCTGAA----------GATCAGTCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:11635047-11635236 - GAGGA-------AT--------------------------------------------------------------------------------------------GCGGAACAGTTGACTAAACAGCAGCAGCAAAACCAGGCAGATCAAAAGAAATTGGAAGAACTTTCACTCCTGCGGGAAACATTGCAACGTAAGGAGGAGGATCTAAAGGAGCTGGAGGAGCAACTAACAGCCGTCAGGCAGGATCTAGATGACATGTCCGTGCAGATGAA----------GATCAGTCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGCACGAGAGCACCGAGAA-AT--------GT--------------------------GAGCAGCTGGAGGCACAGCTGAAGCTGGTCGAGGCGCAGCTGCGGGAGCTGAAACAAATGACCGAACAGTG---------------------------------------------------------------------------------------------------------------------------------------CAGCGAAAG-------------------------------------CG---------------------------------------AGCTACTCAAAAAGAAGCTGGAG----------------GCCAGGGAACAGGATTTGGAGGA------------------------------------------GCTGCGCGACCAATTGCAATGCAGTCGGCTG------------GAATTGTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................GCTGGAG----------------GCCAGGGAACAG........................................................................................................1912.002000000000000000011000000000000000000000000000000000000000000000
...........ACCGAGAA-AT--------GT--------------------------GAGCAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000000000000000000010000000000000000000000000000000
.................................................................TGGAGGCACAGCTGAAGCTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................GAACAGTG---------------------------------------------------------------------------------------------------------------------------------------CAGCGAAAG-------------------------------------CG---------------------------------------AGCTACTC...................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAGGGAACAGGATTTGGAGGA------------------------------------------GCTGCGC............................................2811.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGATTTGGAGGA------------------------------------------GCTGCGC............................................1911.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................CGAGGCGCAGCTGCGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000100000000000000000000000000000000
.....................................................................GGCACAGCTGAAGCTGGTCGAGGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................GCTGAAGCTGGTCGAGGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
..............................GT--------------------------GAGCAGCTGGAGGCACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................................GCACAGCTGAAGCTGGTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
.........GCACCGAGAA-AT--------GT--------------------------GAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000100000000000000000000000000000
..........................................................................................GGCGCAGCTGCGGGAGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
TGCACGAGAGCACCGAGAA-A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................GAAGCTGGTCGAGGCGCAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
......AGAGCACCGAGAA-AT--------GT--------------------------GAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................GAACAGTG---------------------------------------------------------------------------------------------------------------------------------------CAGCGAAAG-------------------------------------CG---------------------------------------AGCTAC.....................................................................................................................................................2511.001000000000100000000000000000000000000000000000000000000000000000
.GCACGAGAGCACCGAGAA-AT--------GT--------------------------GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......GAGCACCGAGAA-AT--------GT--------------------------GAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
................GAA-AT--------GT--------------------------GAGCAGCTGGAGGCACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
................................................................CTGGAGGCACAGCTGAAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
.............................................................................TGAAGCTGGTCGAGGCGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................AGTG---------------------------------------------------------------------------------------------------------------------------------------CAGCGAAAG-------------------------------------CG---------------------------------------AGTC.......................................................................................................................................................1970.141001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGCACGAGAGCACAGAGAG-AG--------GC--------------------------GAGGAGCTGGAGGCGCAGCTGAA------------------------------------------------------------------------GAAATTGCTGGA---------------------------------------------------------------------------------------------GCAGTCCAACGACAT---CACAGAAGCC--------------------------------------------------------------------------------------------------------------GAGCAGCAGCTGGAGGA------------------------------------------ATTGCGCGAGCAATTGCAGGCGAGCGACCTT------------CAGCTGCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................AGCC--------------------------------------------------------------------------------------------------------------GAGCAGCAGCTGGAGGA------------------------------------------AT.................................................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGGCGAGCGACCTT------------CAGCTGCT2711.001100000
...............................................................GCTGGAGGCGCAGCTGAA------------------------------------------------------------------------GAAATTGCTG.......................................................................................................................................................................................................................................................................................................................................................2811.001000001
droGri2
TGCAGGCGAGCACCGAGCA-CA--------GC--------------------------GAGCAGCTGCAGGCAAACGAGCTGGTGC------------------------------------------------------------------------TCTTGGA---------------------------------------------------------GCGGATGCGGTG------------------------------------CAC---CGATCAACTG--------------------------------------------------------------------------------------------------------------AAGTCCGAGCTGGAGGC------------------------------------------GCTGCAGGAGGAAATGAAACGCAGGCAGTTG------------GAGCTCGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAAATGAAACGCAGGCA........................2111.00110
................................................................................................................................................................................................................................................................................C---CGATCAACTG--------------------------------------------------------------------------------------------------------------AAGTCCGA......................................................................................................1911.00110
droWil2
TGCAGCAGCAGCACCAGCAGCA---------G--------------------------CAACAGCAGCAGCAACAATTGCAGTTGGTT------------------------------------------------------------------------------------------------------------------------CAATTGCAGCAACAGCAGCAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-----------------------AASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........CACCAGCAGCA---------G--------------------------CAACAGCAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..CAGCAGCAGCACCAGCAGCA---------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
dp5
TGGGAGGGAGAGAC--------------------------------------------------------------------------------------------TATGAGCAGATCTTTG------------------------------------------------------------------------------------AGCTGGAGAGGCTCACAGAACAGATCCAGGCCAAGGAAGAGCAGCTGGAGAAGCAGGCCACTGATCTGG----------------------------------------------------------------------------AGCAGCTCACAGAACAGGTCCAG----------------GCCAAGGAAGAGCAGCTGAAGAA------------------------------------------GCAG---------------GCCACTGATCTGGAGCAGCTCACAGAACAGGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................TGAGCAGATCTTTG------------------------------------------------------------------------------------AGCTGGAGAGGC................................................................................................................................................................................................................................................................................................2614.0040000000310
..................................................................................................................................................................................................................GGAGAGGCTCACAGAACAGATCCA................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................ATGAGCAGATCTTTG------------------------------------------------------------------------------------AGCTGGAGAGGC................................................................................................................................................................................................................................................................................................2711.0010000000001
.........GAGAC--------------------------------------------------------------------------------------------TATGAGCAGATCTTTG------------------------------------------------------------------------------------AGCT........................................................................................................................................................................................................................................................................................................2511.0010010000000
.........................................................................................................................G------------------------------------------------------------------------------------AGCTGGAGAGGCTCACAGAACAGAT...................................................................................................................................................................................................................................................................................2611.0010100000000
..................................................................................................................GATCTTTG------------------------------------------------------------------------------------AGCTGGAGAGGCT...............................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................ATGAGCAGATCTTTG------------------------------------------------------------------------------------AGCTGGAGAGGCT...............................................................................................................................................................................................................................................................................................2811.0010010000000
...................................................................................................................................................................................................................GAGAGGCTCACAGAACAGATCC.................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................TCACAGAACAGATCCAGGC.............................................................................................................................................................................................................................................................................1911.0010000000001
......................................................................................................................................................................................................................................................GCAGCTGGAGAAGCAGGC..................................................................................................................................................................................................................................................1830.6720110000000
..........................................................................................................................................................................................................................................................................................................................................................................GAACAGGTCCAG----------------GCCAAGGAAGAGC.......................................................................................................2530.6720010100000
............................................................................................................................................................................................................................................................GGAGAAGCAGGCCACTGATCTGG----------------------------------------------------------------------------A..........................................................................................................................................................2430.6720200000000
.........................................................................................................................................................................................................................................AGGCCAAGGAAGAGCAGCTGGAGA.........................................................................................................................................................................................................................................................2430.3310000000001
...................................................................................................................................................................................................................................................AGAGCAGCTGGAGAAGCAGGC..................................................................................................................................................................................................................................................2130.3310100000000
......................................................................................................................................................................................................................................................................................................................................................................CACAGAACAGGTCCAG----------------GCCAAGG.............................................................................................................2330.3310010000000
.............................................................................................................................................................................................................................................CAAGGAAGAGCAGCTGGAGAAGCAGGC..................................................................................................................................................................................................................................................2730.3310000000001
..............................................................................................................................................................................................................................................AAGGAAGAGCAGCTGGAGAAGCAGGC..................................................................................................................................................................................................................................................2630.3310100000000
.............................................................................................................................................................................................................................................CAAGGAAGAGCAGCTGGAGA.........................................................................................................................................................................................................................................................2030.3310100000000
...........................................................................................................................................................................................................................................................TGGAGAAGCAGGCCACTGATCTGG----------------------------------------------------------------------------A..........................................................................................................................................................2530.3310100000000
............................................................................................................................................................................................................................................CCAAGGAAGAGCAGCTGGAGA.........................................................................................................................................................................................................................................................2130.3310100000000
........................................................................................................................................................................................................................................................AGCTGGAGAAGCAGGCCACTGATCT.........................................................................................................................................................................................................................................2530.3310100000000
.............................................................................................................................................................................................................................................CAAGGAAGAGCAGCTGGAGAAGCA.....................................................................................................................................................................................................................................................2430.3310000000001
........................................................................................................................................................................................................................................CAGGCCAAGGAAGAGCAGCTGGAG..........................................................................................................................................................................................................................................................2430.3310100000000
.............................................................................................................................................................................................................................................CAAGGAAGAGCAGCTGGAG..........................................................................................................................................................................................................................................................1930.3310000100000
............................................................................................................................................................................................................................................................GGAGAAGCAGGCCACTGA............................................................................................................................................................................................................................................1830.3310100000000
..........................................................................................................................................................................................................................................................CTGGAGAAGCAGGCCACT..............................................................................................................................................................................................................................................1830.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................AACAGGTCCAG----------------GCCAAGGAAGA.........................................................................................................2230.3310100000000
.....................................................................................................................................................................................................................................................................................................................................................................TCACAGAACAGGTCCAG----------------GCCAAGGAAGA.........................................................................................................2830.3310000000100
............................................................................................................................................................................................................................................................................GATCTGG----------------------------------------------------------------------------AGCAGCTCACA................................................................................................................................................1840.2510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAA------------------------------------------GCAG---------------GCCACTGATCTGGA..................2140.2510100000000
......................................................................................................................................................................................................................................................................GCCACTGATCTGG----------------------------------------------------------------------------AGCAGCT....................................................................................................................................................2040.2510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------GCCACTGATCTGGA..................1840.2510100000000
......................................................................................................................................................................................................................................................................................................................................................................CACAGAACAGGTCCAG----------------GC..................................................................................................................1840.2510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------GCAG---------------GCCACTGATCTGGAGCAGCT............2640.2510100000000
.....................................................................................................................................................................................................................................................................................................................................................................TCACAGAACAGGTCCAG----------------GCC.................................................................................................................2040.2510100000000
................................................................................................................................................................................................................................................................................................................................................................GCAGCTCACAGAACAGGTCCAG----------------GC..................................................................................................................2440.2510010000000
.................................................................................................................................................................................................................................................................................GG----------------------------------------------------------------------------AGCAGCTCACAGAACAGGTCCAG----------------GC..................................................................................................................2740.2510010000000
.......................................................................................................................................................................................................................................................................CCACTGATCTGG----------------------------------------------------------------------------AGCAGCTCACA................................................................................................................................................2340.2510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGATCTGGAGCAGCTCAC.........2240.2510100000000
......................................................................................................................................................................................................................................................................................................................................................................CACAGAACAGGTCCAG----------------GCC.................................................................................................................1940.2510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGATCTGGAGCAGCT............2040.2510100000000
.......................................................................................................................................................................................................................................................................CCACTGATCTGG----------------------------------------------------------------------------AGCAGCTCAC.................................................................................................................................................2240.2510100000000
...............................................................................................................................................................................................................................................................GAAGCAGGCCACTGATCTGG----------------------------------------------------------------------------A..........................................................................................................................................................2140.2510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGATCTGGAGCAGCTCACA........2340.2510100000000
................................................................................................................................................................................................................................................................AAGCAGGCCACTGATCTGG----------------------------------------------------------------------------AGCAGCT....................................................................................................................................................2640.2510100000000
..................................................................................................................................................................................................................................................................GCAGGCCACTGATCTGG----------------------------------------------------------------------------A..........................................................................................................................................................1840.2510100000000
.....................................................................................................................................................................................................................................................................................................................................................................TCACAGAACAGGTCCAG----------------GC..................................................................................................................1940.2510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGAGCAGCTCACA........1840.2510100000000
droPer2
TGCAGGAGCAGCTCGAGGA-GG--------AT------------GAGGAGGCCAAGCG--TAACTTTGAGCGCA---------------------------------------AGCTGGCCGA-GGTCACCGGCCAGATGCAGGAGATCAAGAAGA------------------------------------------------------------------------------------------------------------------------------------------AGGCTGAGGAGGATGCCGACCTGGCCAAG---------GAGCTGGAGGAGGGCAAGAAGCGGCTCAACAAGGAGATCGAG----------------GTGTTGGAGCGACAGGTGAAGGA------------------------------------------GCTGATTGCCCA------GAACGAT------------------CGCCTGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCA------GAACGAT------------------CGCCTG..1813.003300000
........................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCGACAGGTGAAG...............................................................................................1913.003000003
.................................................GGCCAAGCG--TAACTTTGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
...............................................................................................................................................................................................................................................................................................................AGGATGCCGACCTGGCCAAG---------GA............................................................................................................................................................................2212.002200000
..........................................................................................................................................................................................................................................................................................................................................................................AAGGAGATCGAG----------------GTGTTGGAGC..........................................................................................................2212.002200000
.............CGAGGA-GG--------AT------------GAGGAGGCCAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
..........GCTCGAGGA-GG--------AT------------GAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
.........................................................G--TAACTTTGAGCGCA---------------------------------------AGCTGGCCGA-..............................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.GCAGGAGCAGCTCGAGGA-GG--------AT------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..........................................................................................................................................................GA------------------------------------------------------------------------------------------------------------------------------------------AGGCTGAGGAGGATGCCGACCT..............................................................................................................................................................................................2411.001000001
...................................................CCAAGCG--TAACTTTGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................AAGGAGATCGAG----------------GTGTTGGAG...........................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCA------GAACGAT------------------CGCCTGGA2011.001010000
...........................................................................................................................................GCAGGAGATCAAGAAGA------------------------------------------------------------------------------------------------------------------------------------------AG..................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................GAG----------------GTGTTGGAGCGACAGGTGAAGG..............................................................................................2511.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCCCA------GAACGAT------------------CGCCTG..2211.001010000
..................................................................TGAGCGCA---------------------------------------AGCTGGCCGA-GGT...........................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGACAGGTGAAGGA------------------------------------------GCTGATT............................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................AAGCGGCTCAACAAGGAGATC.......................................................................................................................................2111.001000010
..................................................................................................................................................................................................................................................................................................................................................................................CGAG----------------GTGTTGGAGCGACAGGT...................................................................................................2111.001000001
......................................................................................................................................................AGAAGA------------------------------------------------------------------------------------------------------------------------------------------AGGCTGAGGAGGATG.....................................................................................................................................................................................................2111.001000001
....................................................CAAGCG--TAACTTTGAGCGCA---------------------------------------AGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCGACAGGTGAAGGA------------------------------------------GCTG...............................................2511.001010000
.........................................................G--TAACTTTGAGCGCA---------------------------------------AGCTGGC..................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.............CGAGGA-GG--------AT------------GAGGAGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................................................................................................................CAAG---------GAGCTGGAGGAGGGC...............................................................................................................................................................1911.001000001
.............................................................AACTTTGAGCGCA---------------------------------------AGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................CAACAAGGAGATCGAG----------------GTGT................................................................................................................2011.001001000
....................................................................................................................................................CAAGAAGA------------------------------------------------------------------------------------------------------------------------------------------AGGCTGAGGAGGATGCC...................................................................................................................................................................................................2511.001100000
.........................................................G--TAACTTTGAGCGCA---------------------------------------AGCT.....................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------GCTGATTGCCCA------GAACGAT------------------CG......2211.001000100
............................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------GCTGATTGCCCA------GAACGAT------------------CGC.....2311.001100000
.GCAGGAGCAGCTCGAGGA-GG--------AT------------GAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................GAGGAGGGCAAGAAGCGGCT....................................................................................................................................................2011.001000001
..............................................................................................................................................................................................................................................................................................................................CCAAG---------GAGCTGGAGGAGGG................................................................................................................................................................1911.001000001
droAna3
GAGGA-----CGCCCGGCT-GC--------GTCTGGAGGTGGCCCTCCAGGCCCAGCG--GGAGCTGCAGGAGGAGCTGGC------------------GAGAGAG----------------------TCCTC-----CGAGCC------------------------------------------------------------GGACAGTGACGAGCTCAAGGAGCTCCTTTCCGCCACAAG-------------------------------------------AAGCAAGCTGGAGAAGGCCGAAGCCCAGCTGGCGGAGAGCCAGGAC-------------------------------------------------------------------------CTGGAGGA------------------------------------------GATGCTGGCC--AACACAAAACAGGAAC---------------------TTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................GGCGGAGAGCCAGGAC-------------------------------------------------------------------------CTGG.................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................AGGAC-------------------------------------------------------------------------CTGGAGGA------------------------------------------GATGCTGGCC--.......................................2311.001010000
.................................................GGCCCAGCG--GGAGCTGCAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................ACAAG-------------------------------------------AAGCAAGCTGGAGAAGGC..........................................................................................................................................................................................................2311.001000010
.......................................................................................................................................................................................................................................................................................................................CAGCTGGCGGAGAGCCAGGAC-------------------------------------------------------------------------CTGGA................................................................................................2611.001000001
........................................................................................................................................................................................................................................................................................................................................GGAC-------------------------------------------------------------------------CTGGAGGA------------------------------------------GATGCTGGC..........................................2111.001010000
droKik1
TATCAGAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGCCAGCGCTTGGAGGATAGAACCAACCAGCTGAA----------GGCCAGCGAGGATCAGCACAAGGTCCAACTGACCAAGCTCCAAGGCCAGATGCAGGCGGACCAGGAGCGCCTAAGGGAACTCCTCCAAGTGCAGGACAAGCTGG-------------------------------------------------------------------------------------------AG------C----------------SizeHit CountTotal NormTotal
No Reads
droFic1
TAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCGTCACAAAGGAATTGGAGGAGAAGTCCGTTCAGGCAAA----------GATCATCCAGGATCAGCACAAAATCCAGTTGGCAAAAATCCAAAACCAATTGCAGGCGGATCAGGAGAAGCTCAGGGAGCAGCTGCAG-------------------------------------------------------------------------------------------------------------------------------CTGCASizeHit CountTotal NormTotal
No Reads
droEle1
TGCGCGAACTGCTCCAGCTGCAGGACAAGTTG--------------------------GAGCAGCAGAAGGAACTGATGGAGGTGGAT---------------------------------------------------------------------------------------------------------------------------------CAGAACCAGCAGCTGAGCGCCATCAAAAGGCAGCTGGCCGAGGTCACCACTCAACTGGA----------GGAGTGTCGGGAGCAGCTAAACGACCGGGAAGC----------------------------------------------------------------------------------GCAACTATCGAAGCTGCAACAGCAATGCCAAGAGGTCAGCGAGGAGAGGACAAGGCTGCAGGAGCAACTGCAAAGCAGGGAG------CAGTCAATGGACCTGGASizeHit CountTotal NormTotal
No Reads
droBia1
TGCGTGAGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCCGCCGCAGGGAGGAGGATCTGAAGAGTCTGGAGGAGCAACTAACCTCCATCAAACAGGAGCTGGAGGAGAAGAGCAGTCAGCTAAA----------GACCAGCCAAGAGCAGCACAAAATCCAGTTGGCCAAAATTCAAAATCAGCTGCAGGCCGACCAGGAGAGGCTGAGGGAGCAGCTCCAATTGCAGGACAAGTTGG-------------------------------------------------------------------------------------------AG------CAGCAGAAGGAGCTGATSizeHit CountTotal NormTotal
No Reads
droTak1
TCACG-AGGAGACCA---------------TT--------------------------GTGCAGCTGGAGGCGCAGCTGGAGGAGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGGGAGG-----------------------------CACAGGATAAGACTAAACTCCTGGCG------------------------AGGAATGAGGAGAAGCTGGGAGAGCTGCTCCA-------------------------------------------------------------------------------------------GAAAATGCAAGGCAAGGAG-----------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGCGGGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGCAGCACAAGGAAGCGGAGCTGAAGAGTCTGGAGGAGCAGCTGACCTCCGTTAGGCAGGAACTGGAAGAGAAGTCCATTCAAATAAA----------GATCAACCAGGATCAGCACAAACTCCAGCTGACCAAAATCCAAAATCAACTGCAAGCCGATCAGGAGAAGCTGAGGGAGCAGCTCCAG-------------------------------------------------------------------------------------------------------------------------------CTGCASizeHit CountTotal NormTotal
No Reads
dm3
TGCTGGAGAGGAAT--------------------------------------------------------------------------------------------GGGGAACAGCTGACTAAACAGCAGCAGCAAAATCAGGCAGATCAAAAGAAATTGGAAGAACTTTCACAACTGCGGGAGACATTGCAACGTAGGGATGAGGACCTAAAGGAGCTGGAAGAGCAATTAAGCGCCGTTAGACAGGATCTAGATGAGAAGTCCATTCAGATGAA----------GATCAGTCAGGATCAGCACAAACTCCAGTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................TTCAGATGAA----------GATCAGTCAGGATCAGC...........................................................................................................................................................................................................27139.003900000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000001000000000000000000000000000002011000000000000000000000000000000000000000000000000000000000000000000000000250000200000000000000000001200000
.......................................................................................................................................................................................GACATTGCAACGTAGGGATGAGGACC.........................................................................................................................................................................................................................................................................................................26138.003800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040007000000000000000001015000000000000000000000000000000000000000000000000000000000000000000000000190000000000010000000000000000000
................................................................................................................................................................................................................................................................................TGAA----------GATCAGTCAGGATCAGCA..........................................................................................................................................................................................................22138.003800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TCAGTCAGGATCAGCACAAACTCCAGT...............................................................................................................................................................................................27128.002800000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000100013100000000000000000000000000000000000000000000000000000000000000000000000170000000000000000000000000200000
.....................................................................................................................................................................................................................................................................................................CAGGATCAGCACAAACTCCAGTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------26125.002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000301300000000000000000001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TAAGCGCCGTTAGACAGGATCTAGA...........................................................................................................................................................................................................................................................25121.002100000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TCAGATGAA----------GATCAGTCAGGATCAGC...........................................................................................................................................................................................................26120.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000002001000000000000000000000000000000000000000000000000000000000000000000010000120000000100000000000000100000000
..............................................................................................................................................................................................................................................GTTAGACAGGATCTAGATGAGAAGTC..................................................................................................................................................................................................................................................26119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000150000000000000000000000000000000
...............................................................................................................................................................................................................................................TTAGACAGGATCTAGATGAGAAGTC..................................................................................................................................................................................................................................................25119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000120000010000000000000001000200000
........................................................................................................................................................................TTCACAACTGCGGGAGACATTGCAACG.......................................................................................................................................................................................................................................................................................................................27117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000100000
.........................................................................................................................................................................................................TGAGGACCTAAAGGAGCTGGAAGAGC.......................................................................................................................................................................................................................................................................................26116.00160000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010500000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000001000000
...........................................................................................................................................................................................................................................................................TCAGATGAA----------GATCAGTCAGGATCAGCA..........................................................................................................................................................................................................27116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000100000000000000000000000000000000010000000000000000000000000000000001000100000000000000000000000000100000
.....................................................................................................................................................................................................................................TTAAGCGCCGTTAGACAGGATCTAGA...........................................................................................................................................................................................................................................................26114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000100000000000000000100000000
...................................................................................................................................................TCAAAAGAAATTGGAAGAACTTTCACAAC..........................................................................................................................................................................................................................................................................................................................................29114.00140000000000000000000000000000000000000000000000000000000000000000000000000000024170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TCAGGATCAGCACAAACTCCAGTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000010101130000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000
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...............................................................................................................................................................................................................................................................TGAGAAGTCCATTCAGATGAA----------GATCAG......................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
..............................................................................................................................................................................ACTGCGGGAGACATTGCAACGTAGGGA.................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
.................................................................................................................................................................................GCGGGAGACATTGCAACGTAGG...................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ATCAGGCAGATCAAAAGAAATTGGA........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................GGACCTAAAGGAGCTGGAAG..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ACATTGCAACGTAGGGATGAGGACCTA.......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................AGAAGTCCATTCAGATGAA----------GAT.........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGCTGGAGAGGAAT--------------------------------------------------------------------------------------------GGGGAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
TGCTGGAGAGGAAT--------------------------------------------------------------------------------------------GGGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................................................................................TTAAGCGCCGTTAGACAGGATCTAGATGA........................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AGAACTTTCACAACTGCGGGAGACATT.............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................GACTAAACAGCAGCAGCAAAATCAGG...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TAAGCGCCGTTAGACAGGATCTAG............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................AATTAAGCGCCGTTAGACAGG..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................ACATTGCAACGTAGGGATGA..............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GATCAGTCAGGATCAGCA..........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GAGACATTGCAACGTAGGGATGAGGAC..........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................AGGACCTAAAGGAGCTGGAA...........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GTAGGGATGAGGACCTAAAGGAGC................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................AATTAAGCGCCGTTAGACAGGATCTAGA...........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CTAAAGGAGCTGGAAGAGC.......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................AGAACTTTCACAACTGCGGGAGACAT..............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ACCTAAAGGAGCTGGAAGAGCAATT...................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGCAAAATCAGGCAGATCAAAAGAAAT............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TGAGGACCTAAAGGAGCTGGAAGAG........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TGCGGGAGACATTGCAACGTAGGGATGA..............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................AGCGCCGTTAGACAGGATCTAG............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TGCAACGTAGGGATGAGGACC.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GAAGTCCATTCAGATGAA----------GATCAGTCAGG.................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ATCAGTCAGGATCAGCACAAA......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................TGGAAGAACTTTCACAACTGCGGGAGACA...............................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAAAGAAATTGGAAGAACTTT................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................AAATTGGAAGAACTTTCACAACTGCGGG....................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................ATCAGGCAGATCAAAAGAAATTGGAAGAAC...................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CAGGATCTAGATGAGAAGTCC.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTGGAGAGGAAT--------------------------------------------------------------------------------------------GGGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GCAGCAGCAAAATCAGGCAGATC.....................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GAACTTTCACAACTGCGGGAGACAT..............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ATTCAGATGAA----------GATCAGTCA...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGCCGTTAGACAGGATCTAGATGAGAA.....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TCAGATGAA----------GATCAGTCAGG.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................ACTTTCACAACTGCGGGAGACATTGC...........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................TCTAGATGAGAAGTCCATTCAGATGAA----------G...........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................GATCAAAAGAAATTGGAAGAACTTTCACA............................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTAAGCGCCGTTAGACAGGATCTA.............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................TCTAGATGAGAAGTCCATTCAGATGA.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................ACTTTCACAACTGCGGGAGACATTGA...........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................GATGAGGACCTAAAGGAGCTGGAAGA.........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TCAAAAGAAATTGGAAGAACTTTCA..............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAGAGGAAT--------------------------------------------------------------------------------------------GGGGAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................................................GTCCATTCAGATGAA----------GATCAGTCAGGC................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................CGTAGGGATGAGGACCTAAAGGAGCT...............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................TGGAAGAACTTTCACAACTGC.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CACAACTGCGGGAGACATTGCAACG.......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................GACCTAAAGGAGCTGGAAGAGCAAT....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
droSim2
TGCTGGAGAGGAAT--------------------------------------------------------------------------------------------GGGGAACAGCTGACTAAACAGCAGCAGCAAAATCAGGCAGATCAAAAGAAATTGGAAGAACTTTCACAACTGCGGGAAACATTGCAACGCAGGGATGAGGACCTAAAGCAGCTGGAGGAGCAATTAAGCTCCGTTAGGCAGGATCTAGATGAGAAGTCCATTCAGATGAA----------GAACAGTCAGGATCAGCACAAACTCCAGTTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................TTCAGATGAA----------GAACAGTCAGGATCAGCA..........................................................................................................................................................................................................2813.00300000011000010000
....................................................................................................................................................................................................................................................CAGGATCTAGATGAGAAGTC..................................................................................................................................................................................................................................................2013.00300300000000000000
....................................................................................................................................................................................................................................................................AGTCCATTCAGATGAA----------GAACAGTCAGGA................................................................................................................................................................................................................2812.00200000011000000000
......................................................................................................................................................................................................................................................................TCCATTCAGATGAA----------GAACAGTCAGGA................................................................................................................................................................................................................2612.00200000011000000000
...........................................................................................................................................................................................................AGGACCTAAAGCAGCTGGAGG..........................................................................................................................................................................................................................................................................................2112.00202000000000000000
.........................................................................................................................................................................................................TGAGGACCTAAAGCAGCTGGAGGAGCAA.....................................................................................................................................................................................................................................................................................2812.00200000000000020000
...........................................................................................................................................................................................................................................................TAGATGAGAAGTCCATTCAGATGAA----------GA..........................................................................................................................................................................................................................2712.00200000020000000000
.............................................................................................................................................................TTGGAAGAACTTTCACAACTGCGGGAAACAT..............................................................................................................................................................................................................................................................................................................................3112.00200000020000000000
.........................................................................................................................................................................................................TGAGGACCTAAAGCAGCTGGAGGAGCAAT....................................................................................................................................................................................................................................................................................2912.00200000011000000000
......................................................................................................................................................................................................................................................................TCCATTCAGATGAA----------GAACAGTCAGGATC..............................................................................................................................................................................................................2812.00200000000000011000
.............................................................................................................................................................................................................GACCTAAAGCAGCTGGAGG..........................................................................................................................................................................................................................................................................................1911.00100000000000100000
........................................................................................................................................................................................................................................................................CATTCAGATGAA----------GAACAGTCAGGAT...............................................................................................................................................................................................................2511.00100000000000010000
..........................................................................................................................................................................................................................TGGAGGAGCAATTAAGCTCCGTTAGG......................................................................................................................................................................................................................................................................2611.00100000001000000000
......................................................................................................................................................AAAGAAATTGGAAGAACTTT................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
.............T--------------------------------------------------------------------------------------------GGGGAACAGCTGACTAAACAGCAG........................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
..........................................................................................................................................................................................................................................................................TTCAGATGAA----------GAACAGTCAGGATCAGCACAAAC.....................................................................................................................................................................................................3311.00100000010000000000
..........................................................................................................................................................................................................................................................................TTCAGATGAA----------GAACAGTCAGGATCAGCAC.........................................................................................................................................................................................................2911.00100000001000000000
...................................................................................................................................AGCAAAATCAGGCAGATCAAAAGAAATT...........................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.......................................................................................................................................................................................................GATGAGGACCTAAAGCAGCTGGA............................................................................................................................................................................................................................................................................................2311.00101000000000000000
....................................................................................................................................................................................................AGGGATGAGGACCTAAAGCAGCTGGAG...........................................................................................................................................................................................................................................................................................2711.00100000000000001000
...........................................................................................................................................................................................................................................................................TCAGATGAA----------GAACAGTCAGGATCAGCACA........................................................................................................................................................................................................2911.00100000001000000000
............................................................................................................................................................................................TGCAACGCAGGGATGAGGACCTAAAG....................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................................................................................................................................TCAGATGAA----------GAACAGTCAGGATC..............................................................................................................................................................................................................2311.00100000010000000000
.......................................................................................................................................................................TTTCACAACTGCGGGAAACATTGC...........................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
...............................................................................................................................................................................................AACGCAGGGATGAGGACCTAAAGCAGC................................................................................................................................................................................................................................................................................................2711.00100000000000001000
.....................................................................................................................................................................................................GGGATGAGGACCTAAAGCAGCT...............................................................................................................................................................................................................................................................................................2211.00100000000000001000
...........................................................................................................................................................AATTGGAAGAACTTTCACAACTGCGG.....................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.............................................................................................................................................................TTGGAAGAACTTTCACAACTGCGGGA...................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
......................................................................................................................................AAAATCAGGCAGATCAAAAGAAATTGGA........................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.............................................................................................................................................GGCAGATCAAAAGAAATTGGAAGAACT..................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.......................................................................................................................................................................................AACATTGCAACGCAGGGATGAGGAC..........................................................................................................................................................................................................................................................................................................2511.00100000000001000000
........................................................................................................................TAAACAGCAGCAGCAAAATCAGGCAGA.......................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
............................................................................................................................................................................................TGCAACGCAGGGATGAGGACCTAAAGC...................................................................................................................................................................................................................................................................................................2711.00100000000001000000
............................................................................................................................................AGGCAGATCAAAAGAAATTGGAAGAAC...................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
................................................................................................................................................................................................................................................................................TGAA----------GAACAGTCAGGATCAGCACAAAC.....................................................................................................................................................................................................2711.00100000000000010000
................................................................................................................................................................................................................................................................................TGAA----------GAACAGTCAGGATCAGCACA........................................................................................................................................................................................................2411.00100000001000000000
.....................................................................................................................................................................................................................................TTAAGCTCCGTTAGGCAGGATCTAGA...........................................................................................................................................................................................................................................................2611.00100000000010000000
...................................................................................................................................................................................................................................AATTAAGCTCCGTTAGGCAG...................................................................................................................................................................................................................................................................2011.00101000000000000000
...............................................................................................................................................................GGAAGAACTTTCACAACT.........................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.............T--------------------------------------------------------------------------------------------GGGGAACAGCTGAC..................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
..................................................................................................................................................................AGAACTTTCACAACTGCGGGAAACAT..............................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.......................................................................................................................................................................................AACATTGCAACGCAGGGATGAGGACC.........................................................................................................................................................................................................................................................................................................2611.00100000000001000000
..........................................................................................................................................................................................................................................................................TTCAGATGAA----------GAACAGTCAGGATCAGC...........................................................................................................................................................................................................2711.00100000001000000000
...........................................................................................................................................................................................................................................................................TCAGATGAA----------GAACAGTCAGGATCAGCAC.........................................................................................................................................................................................................2811.00100000000000010000
.................................................................................................................................................................................................CGCAGGGATGAGGACCTAAAGC...................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...................................................................................................................................................................................................................................................................................A----------GAACAGTCAGGATCAGCACAAACTC...................................................................................................................................................................................................2611.00100000000001000000
........................................................................................................................................................................................................ATGAGGACCTAAAGCAGC................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.......................................................................................................................................................................................................................................................................CCATTCAGATGAA----------GAACAGTCAGGAT...............................................................................................................................................................................................................2611.00101000000000000000
...........................................................................................................................................................................................................AGGACCTAAAGCAGCTGGAGGAGC.......................................................................................................................................................................................................................................................................................2411.00101000000000000000
.................................................................................................................................................................................................................TAAAGCAGCTGGAGGA.........................................................................................................................................................................................................................................................................................1620.50100000000100000000
...............................................................................................................................................................................................................................................................TGAGAAGTCCATTCAGA..........................................................................................................................................................................................................................................1720.50100000001000000000
droSec2
TGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGGGATGAGGACCTAAAGCAGCTGGAGGAGCAATTAAGCTCCGTTAGGCAGGATCTAGATGAGAAGTCCATTCAGATGAA----------GATCAATCAGGATCAGCACAAGCTCCAGTTGGCCAATCTCCAAAATCAGTTGCAAGCCGATCAGGAGAAGCTAAGAGAACTGCTCCAGC----------------------------------------------------------------------------------------------TGCAGGACAAAC-----------------------TGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................AATTAAGCTCCGTTAGGCAGGAT................................................................................................................................................................................................................................................................2313.0030120
............................................................................................................................................................................................................GGACCTAAAGCAGCTGGAGGAGC.......................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................................................................................................................................................................................GCAGGATCTAGATGAGAAG....................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................GAAGCTAAGAGAACTGCTCCA.....................................................................................................................................2111.0010010
.......................................................................................................................................................................................................................................................................CCATTCAGATGAA----------GATCAATCAG..................................................................................................................................................................................................................2311.0010010
..................................................................................................................................................................................................................................................................................................AATCAGGATCAGCACAAGCTCCAGTT..............................................................................................................................................................................................2611.0010010
................................................................................................................................................................................................................................................................GAGAAGTCCATTCAGATGAA----------GAT.........................................................................................................................................................................................................................2311.0010100
.....................................................................................................................................................................................................................................TTAAGCTCCGTTAGGCAGGAT................................................................................................................................................................................................................................................................2111.0010010
.................................................................................................................................................................................................................................................................................GAA----------GATCAATCAGGATCAGC...........................................................................................................................................................................................................2011.0010010
TGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGGGATGAGGACCTAAAGC...................................................................................................................................................................................................................................................................................................2711.0011000
...............................................................................................................................................................................................................................................................................................................................................TTGCAAGCCGATCAGGAGA........................................................................................................................................................1911.0010001
..........................................................................................................................................................................................................GAGGACCTAAAGCAGCTGGA............................................................................................................................................................................................................................................................................................2011.0010010
...............................................................................................................................................................................................................................................................................................ATCAATCAGGATCAGCACA........................................................................................................................................................................................................1911.0010100
.................................................................................................................................................................................................................................GCAATTAAGCTCCGTTAGGCAGGAT................................................................................................................................................................................................................................................................2511.0010010
droYak3
TGGACAATAGCACCAAACTGCT---------G--------------------------GAAAAGAAT---------------------------------------GCAGAACAGCTGACCAAACAGCAGCAGCAAAACGCGTCAGATCAAAAGAAATTGGAAGAACTCTCACACCTGCGGGAAACATTACAACGCAAGGAAGTGGATCTAATGGAGCTGGAGGAGCAATTAGCCTCGGTTAGGCAGGATCTAGATGAGAAATCCGTTCAGCTGAA----------GATCAGTCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................GACCAAACAGCAGCAGCAAAACGCGT...........................................................................................................................................................................................................................................................................................................................................................................2612.00201000010000
................................................................................................................................................................................................................CTAATGGAGCTGGAGGAGCAATT...................................................................................................................................................................................................................................................................................2311.00100100000000
.............CAAACTGCT---------G--------------------------GAAAAGAAT---------------------------------------GCA.............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......................................................................................................................................................AAGAAATTGGAAGAACTCTCACACCT.........................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................................................................................................................................................................................AACATTACAACGCAAGGAAGTGGAT..........................................................................................................................................................................................................................................................................................................2511.00100000010000
................................................................................................................................................................................................................................................TAGGCAGGATCTAGATGA........................................................................................................................................................................................................................................................1811.00100100000000
..........................................................................................................................................................................................................................................................CTAGATGAGAAATCCGTTCAGCC.........................................................................................................................................................................................................................................2311.00100100000000
......................................................................................................................................................AAAGAAATTGGAAGAACTCTCACACC..........................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................................................................................................................CCAAACAGCAGCAGCAAAACGCGT...........................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.GGACAATAGCACCAAACTGCT---------G--------------------------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..............................................................................................................................................................................................................................GGAGCAATTAGCCTCGGTTAG.......................................................................................................................................................................................................................................................................2111.00101000000000
.......................................................................................................................................................................................................................................AGCCTCGGTTAGGCAGGAT................................................................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................................................................CATTACAACGCAAGGAAGTGGAT..........................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................AAGGAAGTGGATCTAATGGA..................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................T---------G--------------------------GAAAAGAAT---------------------------------------GCAGAACAGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................GCAAAACGCGTCAGATCAAAAGA...............................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........................................................GAAAAGAAT---------------------------------------GCAGAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...........................................................................................................................................................AATTGGAAGAACTCTCACACCT.........................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................................................................................................................................................................................................GCAATTAGCCTCGGTTAGGCAG...................................................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................................................................GAGAAATCCGTTCAGCTGAA----------............................................................................................................................................................................................................................2011.00100000010000
TGGACAATAGCACCAAACTGCT---------G--------------------------GAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
droEre2
GAGGA-------AT--------------------------------------------------------------------------------------------GCGGAACAGTTGACTAAACAGCAGCAGCAAAACCAGGCAGATCAAAAGAAATTGGAAGAACTTTCACTCCTGCGGGAAACATTGCAACGTAAGGAGGAGGATCTAAAGGAGCTGGAGGAGCAACTAACAGCCGTCAGGCAGGATCTAGATGACATGTCCGTGCAGATGAA----------GATCAGTCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................GCGGAACAGTTGACTAAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................25115.001500000015
......................................................................................................................................................................................................................................................................TCCGTGCAGATGAA----------GATCAGTCAGGA................................................................................................................................................................................................................26112.001200000012
..GGA-------AT--------------------------------------------------------------------------------------------GCGGAACAGTTGACTA................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...........................................................................................................................................................................................................................................................................GCAGATGAA----------GATCAGTCAG..................................................................................................................................................................................................................1911.0010000100
.................................................................................................................................................................................................................TAAAGGAGCTGGAGGAGCAAC....................................................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................AGATGAA----------GATCAGTCAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2011.0010000100
....................................................................................................................................GCAAAACCAGGCAGATCA....................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
........................................................................................................................................................................TTCACTCCTGCGGGAAACATTGCAAC........................................................................................................................................................................................................................................................................................................................2611.0011000000
............................................................................................................................................................................................................................................CCGTCAGGCAGGATCTAGATGACATGT...................................................................................................................................................................................................................................................2711.0011000000
.................................................................................................................................GCAGCAAAACCAGGCAGATCAAAAGAAA.............................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.............T--------------------------------------------------------------------------------------------GCGGAACAGTTGACTAAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.................................................................................................................................................................................................................TAAAGGAGCTGGAGGAGCA......................................................................................................................................................................................................................................................................................1911.0010000100
.........................................................................................................................................................................................................................................................................GTGCAGATGAA----------GATCAGTCAG..................................................................................................................................................................................................................2111.0010000010
............................................................................................................................................................................................................................................................AGATGACATGTCCGTGCAGAT.........................................................................................................................................................................................................................................2111.0010000100
........................................................................................................................................................................TTCACTCCTGCGGGAAACATTGC...........................................................................................................................................................................................................................................................................................................................2311.0010000010
....................................................................................................................................................CAAAAGAAATTGGAAGAACT..................................................................................................................................................................................................................................................................................................................................................2011.0010000100

Generated: 05/16/2015 at 10:09 PM