ID:

dvi_12775

 Coordinate:

scaffold_12970:1140613-1140763 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.8 -18.3 -18.2

Flybase annnotation

exon [dvir_GLEANR_3873:1]; CDS [Dvir\GJ19059-cds]; intron [Dvir\GJ19059-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATGAAAGCGTCGAGGAGTTCAAGCAGAATCTGGAAGAAATGCTGCCCGATGTATGTACATATATACATAGAGATATACATATAGAGAGATCGTTGGCATCTAGATGGCGCCACAGTGCTTAACACTTTTTAATTTATTTTCAACAATTTTTTTTTTTTTTATTTCATACATATTTTTTTTATTACTCACAATTCACGTAATCAGAAGTGTTTGCTCTCACTATGCTTGTTCTTGTGCCGCCATTGTCGGCA
**************************************************.((((((......))))))((((((.......((((((((.(((((....((((((((((....)))))............)))))...))))).))))))))......))))))....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060689
160x9_testes_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 GSM1528803
follicle cells		 V116
male body		 SRR060679
140x9_testes_total
 SRR060673
9_ovaries_total
 V047
embryo
 SRR060663
160_0-2h_embryos_total
 SRR060655
9x160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 M061
embryo
 SRR060665
9_females_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060681
Argx9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060683
160_testes_total
 SRR060666
160_males_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
...................................................................................................CTAGATGGCGACATCGTGCT.................................................................................................................................... 20 3 7 13.43 94 41 0 24 0 0 0 12 0 2 7 2 0 0 0 0 0 0 0 2 3 0 1
..........CGAGGAGTTCAAGCAGAATCTGGA......................................................................................................................................................................................................................... 24 0 1 3.00 3 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................GCTCTCACTATGCTTGTTCTTGTGCC............. 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................AATCTGGAAGAAATGCTGCCCGATCTG...................................................................................................................................................................................................... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................GTTTGCTCTCACTATGCTTGTTCTTGTGC.............. 29 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................AGAATCTGGAAGAACTGCT................................................................................................................................................................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................AAGCAGAATCTGGAAGAAAT................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGCAGAATCTGGAAGAAATGCT................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GTCGAGGAGTTCAAGCAGA................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ACGTAATCAGAAGTGTTTGCT.................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ATGAAAGCGTCGAGGAGTTCAAGC................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........CGAGGAGTTCAAGCAGAATCTGG.......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GAAAGCGTCGAGGAGTTCAAGCAGA................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GAATCTGGAAGAAATGCTGCCC............................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................GTTCAAGCAGAATCTGGA......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................CGTTGGCATCTAGATGGCGCC............................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............GGAGTTCAAGCAGAATCTGGAAG....................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGCTTGTTCTTGTGCCGCC.......... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TCTAGATGGCGCCGGAGT....................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....AAGCGTCGGGGAGTTAAAGC................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................CTAGATGGCGACACCGTGC..................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................................GAAGAAATGCTGTCCTAT......................................................................................................................................................................................................... 18 2 6 0.33 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGTATTCATCTAGATGGCGC............................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................AGAAATGCTGCCCGATCTG...................................................................................................................................................................................................... 19 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................AATTTTATTTTTTTTTATTTC...................................................................................... 21 1 10 0.20 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CATCTAGATGGCGCTTCGG........................................................................................................................................ 19 3 12 0.17 2 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GAGGATTTCAAGAAGAAT.............................................................................................................................................................................................................................. 18 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................CATCTAGATGGCGCTTCG......................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................GTATTCATCTAGATGGCGC............................................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AGCAGGATCTGGAAGAAC.................................................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTTTGCTCTGGCGATGCTT........................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TACTTTCGCAGCTCCTCAAGTTCGTCTTAGACCTTCTTTACGACGGGCTACATACATGTATATATGTATCTCTATATGTATATCTCTCTAGCAACCGTAGATCTACCGCGGTGTCACGAATTGTGAAAAATTAAATAAAAGTTGTTAAAAAAAAAAAAAATAAAGTATGTATAAAAAAAATAATGAGTGTTAAGTGCATTAGTCTTCACAAACGAGAGTGATACGAACAAGAACACGGCGGTAACAGCCGT
**************************************************.((((((......))))))((((((.......((((((((.(((((....((((((((((....)))))............)))))...))))).))))))))......))))))....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 M028
head
 SRR060675
140x9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
..................................................................................................................................................AAAAAAAAAAAAAAAAAAGTATGTATA.............................................................................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................GACCGGGCTGTCACGAATTG................................................................................................................................ 20 3 6 0.17 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................AAAAAAAAAATTATGAGTGTTA........................................................... 22 2 10 0.10 1 0 0 1 0 0 0 0 0
.................................................................................................................................................AAAAAAAAAAAAAAAGAAAGTACGTATA.............................................................................. 28 3 13 0.08 1 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................TGATACGAGCAATAACGCG.............. 19 3 18 0.06 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................AAGGGCATTAAACTTCACAA........................................ 20 3 19 0.05 1 0 0 0 0 0 0 1 0
.......................................................................................................................................................AAAAAAAAGTCAAGTATGT................................................................................. 19 2 20 0.05 1 0 0 0 1 0 0 0 0
......................CCTCTGAGACCTTGTTTAC.................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1
....................................................................................................................................................AAAAAAAAGAGATAAAGTAT................................................................................... 20 2 20 0.05 1 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12970:1140563-1140813 - dvi_12775 ATGAAAGCGTCGAGGAGTTCAAGCAGAATCTGGAAGAAATGCTGCCCGATGTATGTACAT-----------------------------------------------------ATATACATAGAGATATACATATAGAGAGATCGTTGGCATCTAGATGGCGCCACAGTGC----------------------------------------------------------------------------------------------------------------------------------------------------TTAACACTTTTTA-------------------------------------------------------------------------------------------A--TTTA---------------------------TTTTCA----------------------------------------------------------------------------------------------------------------------------------ACAATTTTTTTTTTTTTTATTTCATACAT------------------ATTTTTTTTATTACTCACA--------ATTCACGTAATCAGAA--GT-GTTTGCTCTCAC-------TA--TGCTTGTTCTTGTGCCGCCATT------G---T-CGGCA---
droMoj3 scaffold_6308:1259068-1259397 + ACCAGGCTGTGGAGGAGTTCAGACAAAATCTGGAGGAGATGCTGCCCGAAGTATGTACATGTATCTAAATGTGCGTGTGTGTGTGTGTGTTTATATGGTGGCGACATCTAGATGGCGC---------------------------------------------CACATAATCA--TGCAA-------------------G------------------------------------------------------TTGCATTGCCTTCGCCTGTCCTCTGTTACG-----------------------------------------------------------------------------------------------------TCGACATGCGTGCGACATCTAGATGG-----------CGC-----------------CACTAGCTCATTTGCAAT------------TGCATTTTTGAATAT--------------------------------TTTCTCTGC---------------------------------------------------------------------------------------------CATTTCAT-ATCAAAA-TTTTGTATTTTATTACTCACG-------GACTCACGTAATCAAGA-GGT-GTTTGCTCTCTC-------TG------TCTCTCT----------CCACGGTGTTGTCGGGAA---
droGri2 scaffold_15081:1739833-1740041 - ATCGAACCATTGAGGAGTTCAAGCAGAATCTGGAGGAACTTCTGCCCGATGTACGTAAATCAA--------------------------------------------------GTTTAAATAGGT---------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAACGAATCATTTCAATT--TG---------------------------AATTCA------------------------------------------------------------------------------------------------------------------ATTTTCATATTTTTCCG-----------------------CACCA------------------ACCAATTTTATTACTCACGTTTAC---GCTCACGTAATCAAAAAAGT-GTTTGCTCTT--TT-T-CCTG--TACTTGTTCTTG-G-------T------G---T-CGGCA---
droWil2 scf2_1100000004909:6230211-6230263 - ACGAGACCATTGAGGAATTCAAGCAGAATCTGGAGGAACTTTTGCCTGATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group1e:1482660-1482818 - A---GACCACCGAGGAGTACAGGCAGCACCTGGAGGAGATTCTGCCCGATGTAGG---------------------------------------------------------TGTTCCCGTAGGA---------------------------------------------GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTGCG-------------------------------------------------AGTTTTATTACTCACGATTTGGGGACTCACGTAATCACAGACTTTGTTGCCTCTCGCTCGCTCTC-------GCTCTCT--C-------T------A---T-CGGTG---
droPer2 scaffold_18:324918-325082 - A---GACCACCGAGGAGTACAGGCAGCACCTGGAGGAGATTCTGCCCGATGTAGG---------------------------------------------------------TGTCCCCGTAGGA---------------------------------------------GTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTGCG-------------------------------------------------AGTTTTATTACTCACGATTTGGGGACTCACGTAATCACAGACTTTGTTGCCTCTCGCTCGCTCTCG-CTCTCGCTCTCT--C-------T------A---T-CGGTG---
droAna3 scaffold_13248:3283020-3283271 + ACCAGACGATCGAGGAGTTCAAGCAGAATCTCGAGGAGCTCATACCCGATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTTAG-----TACAG-GGATATTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTATC------------------------AGAAGAGA--------------G-------GATAGAGTGGGATTTCTTTAAAAACAGGGGGATTTCTATTAAAAATGTAATATTTTGTTAAGAAAGTTATTGTTTTTTGGCATAAAGT----------------ACTGTA------------------TTTTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGATTATTTGCGGGCCA-------------------------------C----T--
droBip1 scf7180000396733:207210-207454 + ACCAGACGATCGAGGAGTTCAAGCAGAATCTCGAGGAGCTTATTCCCGATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------TTTCT---C-----------------------------AA-------------------------------------------------------------------------CTCTTCCGAAAGGGATAAAGGAAGAGGGTGGCTTAAGAAGAGATTAAATCTCTTTAAAATATGTAGTTAAGGG-----------AGG---------------------------------------------------ATGATCTCT--------------------------------------GA----------------------GGAGT--------------ATCTTATATTTCAAGTAGGACTGC---------------------------------------------------------------------------------------------C----------------------ATTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGTTTATTTGCG----------GTT----------T------C---C-CGGAA---
droFic1 scf7180000454077:1005601-1005854 + ACCAGACGATCGAGGAGTTCAAGCAGAATCTCGAGGAGCTCCTGCCCGATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGAATCTGGTGCAGTGAATAACCGATAAG---------------------------------------------------------------------------------------------CTAGAAATCAAAATG----TTAAACAAAAAATTTA------------------AAAAAATC-----------AAC---------------------------------------------------ATCATCTTTACT--TT---------------------------TTTTTT------------------------------------------------------------------------------------------------------------------GTTTTTGTTTTTTTGCG--AA-------------GTTCGACTGTA-------------------TTTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TACCTCTCTATATT-TGTGGGTATGTGTTCTT----------TT-----C---C-T----G--
droEle1 scf7180000491001:596789-596926 + GGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGTCT----------------------------------------------------------------------------------------------------------------------------------------------------ATAAAGTTAAACA-------------------------------------------------------------------------------------------T--TTTT---------------------------TTTTAC----------------------------------------------------------------------------------------------------------------------------------ACAAATTTTTTTATAAGAGTTGGACTGTG------------------TTTTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGATTTT-GGTTTGTCTGTGTTTTT----------TT---------C-CTGCC---
droRho1 scf7180000779333:369102-369157 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTTTATTACTC--A--------ATTCACGTAATCAC---------TCCCTCTCGATTTT-GGTGTGTCGG--------------------------------------
droBia1 scf7180000302421:995086-995159 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTACTCACA--------GTTCACGTAATCAC---------TCCCTCTCGATTTC-TGTGCGTTTTTTTCTTT--C----TGTTC-CT--G---C-C----C--
droTak1 scf7180000413414:187034-187103 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTACTCACA--------ACCCACGTAATCAC---------TCCCTCTCAATT-T-GGTGTGTCTGTGTTCCT----------GCCCT--A---T-C----A--
droEug1 scf7180000409271:237198-237552 - ACCAAACCACCGAGGAGTTCAAGCAGAATCTCGAGGAGATGATTCCCAATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTCCAGCAGCTACAGTGGATAACCGCTAAAGCAAATTATCATATATTGAAGAAAATGATAAGTTAGATAGAGATTGGGGATAACCAAGAGTTCAAAGATTTGGTATTAGTTTTGAAACG-----------------------------------------------------------------------------------------------------CCTTCAAGCTTAAGGAACCGGAAAGA-----------AG--TTTT---------------------------TTTTTTAAA--ACATTTAATTTTTTAATTTACT--------------C-------CCTTGAGTAACAAAAA-----------------------------------------------------------------------------------------C---CGTACATA-GGCGAAA-TGTATTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGATTTT-GGTATGTCTGTGGTTTT----------TTTTT--T---T-C----ATT
dm3 chrX:17184991-17185333 - ACCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACGGTCTCGACTACAGTGGATAACCGCTAAAGCAAACAA-------------------------------------------------------------------------CTATACCATACA-------------------------------------------AAAATATGCAATTAGGAACGCATATAAGGAAGATATCGCATTAAAGCATCTTTGAAAAATTGAATAC------------------------------GGATGTTAATTTTTAAATTCCTCACATACTTA--AAAA--AAACTTCGTTTTTAAATTGAGA--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTTAAAAC-GCTAATTTTGAATTTTTTATGACCCACA--------ATTCACGTAATCAC---------TCCCTCTCGATTTT-GGTGTGTCTGTGTTTTT----------TT-----T---T-C----G--
droSim2 x:16298652-16298721 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTAGCCACA--------ATTCACGTAATCAC---------TCCGTCTCGATTTT-GGTGTGTCTGTGTTTTT----------TTTTT--T---T-C----G--
droSec2 scaffold_17:1031413-1031751 - ACCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACGATGTCGACTACAGTGGATAACCGCTAAAGCAAACAA-------------------------------------------------------------------------CTATACCATACA-------------------------------------------AGAATAAGAAATTGGGAACGCATAATAGGAAGATACCGCATTAAAGCATCTTTGAAAAATTTAATAC------------------------------GTATTTTAATTATCAAATTGCTCACAATTTAA--A-------ACATCGTTTATTAATTGAGA--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTTAAAACATCAAAT-TTGAATTTTTTATTACCCACA--------ATTCACGTAATCAT---------TCCCTCTCGATTTT-GGTGTGTCGGTGTTTTT----------TT--T--T---T-C----G--
droYak3 X:15799830-15800142 - ACCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGTGTAGGCCACAGTGGATAACT----------------------------------------------------------------------------------------------ATATA-------------------------------------------ACTATAAGCAATTGAGATCGTTTAATAGG---ATATCGCATTAAAGCAGCTTTGAAAAATTAA------------AAAAA-----------AATC--GGAAGTTAATTTGCAAATTG--------------------------AGTTTATAAATTGAGGAGAACAAATTAAGGC-------TCTGGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTTAAAACAGCGAAT-T-TTATTCTTTATTACTCACA--------ATTCACGTAATCAC---------TCCCTCTCGATTTT-GGTGTGTCTGTGTTTTT----------TT-----------C----C--
droEre2 scaffold_4690:7525406-7525670 - TCCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGTGTCA--TACTGTGTA-----------------AA-------------------------------------------------------------------------CTATACCA-----------------------------------------------------------------------------------------------------AAAAATTGAATAC------------------------------GATATTTAATTCGCCAATGGCTCACTTACTAA--AAAAGGAA---ACGTTTATACATTGAGA---AC---------A-------GATAGAGTTGAACAGC---------------------------------------------------------------------------------------------TTTTAAAACAGCGAAT-T-CAATTTTGTATTACTCACA--------ATTCACGTAATCAC---------TCCCTCTCGATTTT----ATGTCTTTGTTTTTGT--------TT-----C---C-C----C--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATGAAAGCGTCGAGGAGTTCAAGCAGAATCTGGAAGAAATGCTGCCCGATGTATGTACAT-----------------------------------------------------ATATACATAGAGATATACATATAGAGAGATCGTTGGCATCTAGATGGCGCCACAGTGC----------------------------------------------------------------------------------------------------------------------------------------------------TTAACACTTTTTA-------------------------------------------------------------------------------------------A--TTTA---------------------------TTTTCA----------------------------------------------------------------------------------------------------------------------------------ACAATTTTTTTTTTTTTTATTTCATACAT------------------ATTTTTTTTATTACTCACA--------ATTCACGTAATCAGAA--GT-GTTTGCTCTCAC-------TA--TGCTTGTTCTTGTGCCGCCATT------G---T-CGGCA---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........CGAGGAGTTCAAGCAGAATCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003002000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCAC-------TA--TGCTTGTTCTTGTGCC..........................2612.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTCTCAC-------TA--TGCTTGTTCTTGTGC...........................2911.001000100000000000000000000000000000000000000000000000000000000000
....................AAGCAGAATCTGGAAGAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
.....................AGCAGAATCTGGAAGAAATGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
........GTCGAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAATCAGAA--GT-GTTTGCT..........................................................2111.001000000000000000000000000000000000000000000000000000000000000010
ATGAAAGCGTCGAGGAGTTCAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000001000000000000000000000000000000000000000000
..........CGAGGAGTTCAAGCAGAATCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..GAAAGCGTCGAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................GAATCTGGAAGAAATGCTGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
................GTTCAAGCAGAATCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................CGTTGGCATCTAGATGGCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............GGAGTTCAAGCAGAATCTGGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TGCTTGTTCTTGTGCCGCC.......................2011.001000000000000000000000000000000000000000000000000000000000001000
droMoj3
ACCAGGCTGTGGAGGAGTTCAGACAAAATCTGGAGGAGATGCTGCCCGAAGTATGTACATGTATCTAAATGTGCGTGTGTGTGTGTGTGTTTATATGGTGGCGACATCTAGATGGCGC---------------------------------------------CACATAATCA--TGCAA-------------------G------------------------------------------------------TTGCATTGCCTTCGCCTGTCCTCTGTTACG-----------------------------------------------------------------------------------------------------TCGACATGCGTGCGACATCTAGATGG-----------CGC-----------------CACTAGCTCATTTGCAAT------------TGCATTTTTGAATAT--------------------------------TTTCTCTGC---------------------------------------------------------------------------------------------CATTTCAT-ATCAAAA-TTTTGTATTTTATTACTCACG-------GACTCACGTAATCAAGA-GGT-GTTTGCTCTCTC-------TG------TCTCTCT----------CCACGGTGTTGTCGGGAA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................CCTCTGTTACG-----------------------------------------------------------------------------------------------------TCGACATGC.......................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................AGACAAAATCTGGAGGAGATGCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................GACAAAATCTGGAGGAGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................CAGACAAAATCTGGAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGCGACATCTAGATGG-----------CGT-----------------.......................................................................................................................................................................................................................................................................................................................2311.001000001
................................................................................................................................................................................GCAA-------------------G------------------------------------------------------TTGCATTGCCTTCGCCTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................TGTGTGTGTGTGTTTATATGGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTGAATAT--------------------------------TTTCTCTGC---------------------------------------------------------------------------------------------C...................................................................................................................................2211.001100000
.........................................................................CGTGTGTGTGTGTGTGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
....................................................................ATGTGCGTGTGTGTGTGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
droGri2
ATCGAACCATTGAGGAGTTCAAGCAGAATCTGGAGGAACTTCTGCCCGATGTACGTAAATCAA--------------------------------------------------GTTTAAATAGGT---------------------------------------------GC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAACGAATCATTTCAATT--TG---------------------------AATTCA------------------------------------------------------------------------------------------------------------------ATTTTCATATTTTTCCG-----------------------CACCA------------------ACCAATTTTATTACTCACGTTTAC---GCTCACGTAATCAAAAAAGT-GTTTGCTCTT--TT-T-CCTG--TACTTGTTCTTG-G-------T------G---T-CGGCA---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACGAGACCATTGAGGAATTCAAGCAGAATCTGGAGGAACTTTTGCCTGATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................ATCTGGAGGAACTTTTGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00400040
....GACCATTGAGGAATTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300300
.........................GAATCTGGAGGAACTTTTGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00211000
....................AAGCAGAATCTGGAGGAACTTTTGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00210010
...........................ATCTGGAGGAACTTTTGCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........TTGAGGAATTCAAGCAGAATCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..........TGAGGAATTCAAGCAGAATCTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.......................CAGAATCTGGAGGAACTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...................CAAGCAGAATCTGGAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
......................GCAGAATCTGGAGGAACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.........................GAATCTGGAGGAACTTTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........TGAGGAATTCAAGCAGAATCTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..................TCAAGCAGAATCTGGAGGAACTTTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.........................GAATCTGGAGGAACTTTTGCCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
................ATTCAAGCAGAATCTGGAGGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................ATCTGGAGGAACTTTTGCCTGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
................ATTCAAGCAGAATCTGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................AAGCAGAATCTGGAGGAACTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...........................ATCTGGAGGAACTTTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................AATCTGGAGGAACTTTTGCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..........TGAGGAATTCAAGCAGAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
.................................AGGAACTTTTGCCTGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..........................AATCTGGAGGAACTTTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............GAATTCAAGCAGAATCTGGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
......................GCAGAATCTGGAGGAACTTTTGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..........................AATCTGGAGGAACTTTTGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................ATTCAAGCAGAATCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......................GCAGAATCTGGAGGAACTTTTGCCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
......................GCAGAATCTGGAGGAACTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................AGCAGAATCTGGAGGAACTTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.CGAGACCATTGAGGAATTCAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......................GCAGAATCTGGAGGAACTTTTGCCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
...........................ATCTGGAGGAACTTTTGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110000
dp5
A---GACCACCGAGGAGTACAGGCAGCACCTGGAGGAGATTCTGCCCGATGTAGG---------------------------------------------------------TGTTCCCGTAGGA---------------------------------------------GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTGCG-------------------------------------------------AGTTTTATTACTCACGATTTGGGGACTCACGTAATCACAGACTTTGTTGCCTCTCGCTCGCTCTC-------GCTCTCT--C-------T------A---T-CGGTG---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................GTACAGGCAGCACCTGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030300000000
........................AGCACCTGGAGGAGATTCTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000002000
................GTACAGGCAGCACCTGGAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..................ACAGGCAGCACCTGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
...............AGTACAGGCAGCACCTGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTAATCACAGACTTTGTTGC............................................................2311.0010100000000
.......................CAGCACCTGGAGGAGATTCTGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...........GAGGAGTACAGGCAGCACCTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................AGCACCTGGAGGAGATTCTGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........GAGGAGTACAGGCAGCACCTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................GCAGCACCTGGAGGAGATTCTGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................GTACAGGCAGCACCTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................GTACAGGCAGCACCTGGAGGAGATTCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.....................GGCAGCACCTGGAGGAGATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
........................AGCACCTGGAGGAGATTCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........GAGGAGTACAGGCAGCACCTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............GAGTACAGGCAGCACCTGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................CACCTGGAGGAGATTCTGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
......CCACCGAGGAGTACAGGCAGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------AGTTTTATTACTCACGATTTGGGGA.....................................................................................2611.0010100000000
droPer2
A---GACCACCGAGGAGTACAGGCAGCACCTGGAGGAGATTCTGCCCGATGTAGG---------------------------------------------------------TGTCCCCGTAGGA---------------------------------------------GTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTGCG-------------------------------------------------AGTTTTATTACTCACGATTTGGGGACTCACGTAATCACAGACTTTGTTGCCTCTCGCTCGCTCTCG-CTCTCGCTCTCT--C-------T------A---T-CGGTG---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................ACCTGGAGGAGATTCTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
.....................GGCAGCACCTGGAGGAGATTCTGCCCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................GGCAGCACCTGGAGGAGATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................................GCCCGATGTAGG---------------------------------------------------------TGTCCCCGTAGGA---------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............................CTGGAGGAGATTCTGCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................................................GTAGG---------------------------------------------------------TGTCCCCGTAGGA---------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droAna3
ACCAGACGATCGAGGAGTTCAAGCAGAATCTCGAGGAGCTCATACCCGATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTTAG-----TACAG-GGATATTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTATC------------------------AGAAGAGA--------------G-------GATAGAGTGGGATTTCTTTAAAAACAGGGGGATTTCTATTAAAAATGTAATATTTTGTTAAGAAAGTTATTGTTTTTTGGCATAAAGT----------------ACTGTA------------------TTTTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGATTATTTGCGGGCCA-------------------------------C----T--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................CAAGCAGAATCTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003111000
...........................ATCTCGAGGAGCTCATACCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
.....................AGCAGAATCTCGAGGAGCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
....GACGATCGAGGAGTTCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................AATCTCGAGGAGCTCATACCCGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
....GACGATCGAGGAGTTCAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................CAAGCAGAATCTCGAGGAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...................CAAGCAGAATCTCGAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................CAGAATCTCGAGGAGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................ATCTCGAGGAGCTCATACCCGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..........................AATCTCGAGGAGCTCATACCCGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................TTCAAGCAGAATCTCGAGGAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
ACCAGACGATCGAGGAGTTCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................AGAATCTCGAGGAGCTCATACCCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..........CGAGGAGTTCAAGCAGAATCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................TCAAGCAGAATCTCGAGGAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....................AGCAGAATCTCGAGGAGCTCATACCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
................GTTCAAGCAGAATCTCGAGGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
........................AGAATCTCGAGGAGCTCATACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droBip1
ACCAGACGATCGAGGAGTTCAAGCAGAATCTCGAGGAGCTTATTCCCGATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------TTTCT---C-----------------------------AA-------------------------------------------------------------------------CTCTTCCGAAAGGGATAAAGGAAGAGGGTGGCTTAAGAAGAGATTAAATCTCTTTAAAATATGTAGTTAAGGG-----------AGG---------------------------------------------------ATGATCTCT--------------------------------------GA----------------------GGAGT--------------ATCTTATATTTCAAGTAGGACTGC---------------------------------------------------------------------------------------------C----------------------ATTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGTTTATTTGCG----------GTT----------T------C---C-CGGAA---SizeHit CountTotal NormTotal
No Reads
droFic1
ACCAGACGATCGAGGAGTTCAAGCAGAATCTCGAGGAGCTCCTGCCCGATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGAATCTGGTGCAGTGAATAACCGATAAG---------------------------------------------------------------------------------------------CTAGAAATCAAAATG----TTAAACAAAAAATTTA------------------AAAAAATC-----------AAC---------------------------------------------------ATCATCTTTACT--TT---------------------------TTTTTT------------------------------------------------------------------------------------------------------------------GTTTTTGTTTTTTTGCG--AA-------------GTTCGACTGTA-------------------TTTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TACCTCTCTATATT-TGTGGGTATGTGTTCTT----------TT-----C---C-T----G--SizeHit CountTotal NormTotal
No Reads
droEle1
GGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGTCT----------------------------------------------------------------------------------------------------------------------------------------------------ATAAAGTTAAACA-------------------------------------------------------------------------------------------T--TTTT---------------------------TTTTAC----------------------------------------------------------------------------------------------------------------------------------ACAAATTTTTTTATAAGAGTTGGACTGTG------------------TTTTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGATTTT-GGTTTGTCTGTGTTTTT----------TT---------C-CTGCC---SizeHit CountTotal NormTotal
No Reads
droRho1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTTTTATTACTC--A--------ATTCACGTAATCAC---------TCCCTCTCGATTTT-GGTGTGTCGG--------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTACTCACA--------GTTCACGTAATCAC---------TCCCTCTCGATTTC-TGTGCGTTTTTTTCTTT--C----TGTTC-CT--G---C-C----C--SizeHit CountTotal NormTotal
No Reads
droTak1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTACTCACA--------ACCCACGTAATCAC---------TCCCTCTCAATT-T-GGTGTGTCTGTGTTCCT----------GCCCT--A---T-C----A--SizeHit CountTotal NormTotal
No Reads
droEug1
ACCAAACCACCGAGGAGTTCAAGCAGAATCTCGAGGAGATGATTCCCAATGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTCCAGCAGCTACAGTGGATAACCGCTAAAGCAAATTATCATATATTGAAGAAAATGATAAGTTAGATAGAGATTGGGGATAACCAAGAGTTCAAAGATTTGGTATTAGTTTTGAAACG-----------------------------------------------------------------------------------------------------CCTTCAAGCTTAAGGAACCGGAAAGA-----------AG--TTTT---------------------------TTTTTTAAA--ACATTTAATTTTTTAATTTACT--------------C-------CCTTGAGTAACAAAAA-----------------------------------------------------------------------------------------C---CGTACATA-GGCGAAA-TGTATTTTTTTATTACTCACA--------ACTCACGTAATCAC---------TCCCTCTCGATTTT-GGTATGTCTGTGGTTTT----------TTTTT--T---T-C----ATTSizeHit CountTotal NormTotal
No Reads
dm3
ACCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACGGTCTCGACTACAGTGGATAACCGCTAAAGCAAACAA-------------------------------------------------------------------------CTATACCATACA-------------------------------------------AAAATATGCAATTAGGAACGCATATAAGGAAGATATCGCATTAAAGCATCTTTGAAAAATTGAATAC------------------------------GGATGTTAATTTTTAAATTCCTCACATACTTA--AAAA--AAACTTCGTTTTTAAATTGAGA--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTTAAAAC-GCTAATTTTGAATTTTTTATGACCCACA--------ATTCACGTAATCAC---------TCCCTCTCGATTTT-GGTGTGTCTGTGTTTTT----------TT-----T---T-C----G--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..CAAACGGTTCAGGAGTTCAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
...........................ATCTCGAGGAGCTCATTCCCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AATCTCGAGGAGCTCATTCCCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGCAGAATCTCGAGGAGCTCATTCCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCACATACTTA--AAAA--AAACTTCGT....................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGAGA--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------....................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAATCTCGAGGAGCTCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGAAAAATTGAATAC------------------------------GGATGTTAATTTT........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TCTCGACTACAGTGGATAACCGCATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTAATTTTTAAATTCCTCACATACT.......................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGCAGAATCTCGAGGAGCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA--AAACTTCGTTTTTAAATTGAGA--------------G-------T................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGA--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CT..................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCAC---------TCCCTCTCGATTTT-GGTGT...........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAGCAGAATCTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAGCAGAATCTCGAGGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATAAGGAAGATATCGCATTAAAGC.......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGAATTTTTTATGAC...................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCAGGAGTTCAAGCAGAATCTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGA--------------G-------TCTTGAGTTGA......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TATAAGGAAGATATCGCATTAAAGCATC....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACATACTTA--AAAA--AAACTT.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................ACGCATATAAGGAAGATATC.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................AACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.CCAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTTAAAAC-GC........................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGA--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTA................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................GTTCAAGCAGAATCTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAATCTCGAGGAGCTCATTCCCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTTGAAAAATTGAATAC------------------------------GGATGTTAAT...........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AATCTCGAGGAGCTCATTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........TTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGAGGAGCTCATTCCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGCAGAATCTCGAGGAGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GGCGC---------------------------------------------CACGGTCTCGACTACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCATATAAGGAAGATATCGCATT............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAAATTGAGA--------------G-------TCTTG............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................CAGAATCTCGAGGAGCTCATTCCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAATCTCGAGGAGCTCATTCCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTGAATAC------------------------------GGATGTTAATTT.........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................CCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTCAGGAGTTCAAGCAGAATCTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGCAGAATCTCGAGGAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCTGTGTTTTT----------TT-----T---G-........19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
droSim2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTAGCCACA--------ATTCACGTAATCAC---------TCCGTCTCGATTTT-GGTGTGTCTGTGTTTTT----------TTTTT--T---T-C----G--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
ACCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACGATGTCGACTACAGTGGATAACCGCTAAAGCAAACAA-------------------------------------------------------------------------CTATACCATACA-------------------------------------------AGAATAAGAAATTGGGAACGCATAATAGGAAGATACCGCATTAAAGCATCTTTGAAAAATTTAATAC------------------------------GTATTTTAATTATCAAATTGCTCACAATTTAA--A-------ACATCGTTTATTAATTGAGA--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTTAAAACATCAAAT-TTGAATTTTTTATTACCCACA--------ATTCACGTAATCAT---------TCCCTCTCGATTTT-GGTGTGTCGGTGTTTTT----------TT--T--T---T-C----G--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................ATACCATACA-------------------------------------------AGAATAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.........................................ATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT-GGTGTGTCGGTGTTT.................................1811.0010010
..............................................................................................................................................................................................................................................................................................................................................ATAAGAAATTGGGAACGCATA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------G-------TCTTGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTT................................................................................................................................2211.0011000
.........................GAATCTCGAGGAGCTCATTCCCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
..............................................................................................................................................................................................................................................................................................................................................ATAAGAAATTGGGAACGCATAATA...........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
................................................................................................................................................................................................................................................................................................................................................AAGAAATTGGGAACGCATAATAG..........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..............................................................................................................................................................................CTACAGTGGATAACCGCTAAAGCAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..CAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010010
...........................ATCTCGAGGAGCTCATTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
..........................AATCTCGAGGAGCTCATTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010
........................AGAATCTCGAGGAGCTCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5011000
.CCAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010100
.....................AGCAGAATCTCGAGGAGCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
................GTTCAAGCAGAATCTCGAGGAGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
................GTTCAAGCAGAATCTCGAGGAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010010
...AAACGGTTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010010
droYak3
ACCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGTGTAGGCCACAGTGGATAACT----------------------------------------------------------------------------------------------ATATA-------------------------------------------ACTATAAGCAATTGAGATCGTTTAATAGG---ATATCGCATTAAAGCAGCTTTGAAAAATTAA------------AAAAA-----------AATC--GGAAGTTAATTTGCAAATTG--------------------------AGTTTATAAATTGAGGAGAACAAATTAAGGC-------TCTGGAGTTGAACAGC---------------------------------------------------------------------------------------------CTTTAAAACAGCGAAT-T-TTATTCTTTATTACTCACA--------ATTCACGTAATCAC---------TCCCTCTCGATTTT-GGTGTGTCTGTGTTTTT----------TT-----------C----C--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..CAAACGGTTCAGGAGTTCAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.00602000040000
...........................ATCTCGAGGAGCTCATTCCCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00302000010000
..CAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00301000020000
..........................AATCTCGAGGAGCTCATTCCCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00303000000000
................GTTCAAGCAGAATCTCGAGGAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00301100010000
...........CAGGAGTTCAAGCAGAATCTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000000000
..................................................GTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGTGTAGGCCACAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000020000
...........................ATCTCGAGGAGCTCATTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
...........CAGGAGTTCAAGCAGAATCTCGAGGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................AAA-----------AATC--GGAAGTTAATTTGCA......................................................................................................................................................................................................................................................................................................................2211.00100000010000
..........................AATCTCGAGGAGCTCATTCCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................AAGCAGAATCTCGAGGAGCTCATTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.........................GAATCTCGAGGAGCTCATTCCCAACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
ACCAAACGGTTCAGGAGTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..............................................................................................................................................................................................................................................................................................................................................ATAAGCAATTGAGATCGTTTAATAGG---AT....................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
................GTTCAAGCAGAATCTCGAGGAGCTCATTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
..........................AATCTCGAGGAGCTCATTCCCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................GCAGAATCTCGAGGAGCTCATTCCCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..CAAACGGTTCAGGAGTTCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..............................................CAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGTGTAGGCCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.........................GAATCTCGAGGAGCTCATTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..CAAACGGTTCAGGAGTTCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................CAGAATCTCGAGGAGCTCATTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................GCAGAATCTCGAGGAGCTCATTCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
......................................................G---------------------------------------------------------TGGCGC---------------------------------------------CACTGTGTAGGCCACAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.CCAAACGGTTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...AAACGGTTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
................GTTCAAGCAGAATCTCGAGGAGCTCATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
droEre2
TCCAAACGGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACGTAGG---------------------------------------------------------TGGCGC---------------------------------------------CACTGTGTCA--TACTGTGTA-----------------AA-------------------------------------------------------------------------CTATACCA-----------------------------------------------------------------------------------------------------AAAAATTGAATAC------------------------------GATATTTAATTCGCCAATGGCTCACTTACTAA--AAAAGGAA---ACGTTTATACATTGAGA---AC---------A-------GATAGAGTTGAACAGC---------------------------------------------------------------------------------------------TTTTAAAACAGCGAAT-T-CAATTTTGTATTACTCACA--------ATTCACGTAATCAC---------TCCCTCTCGATTTT----ATGTCTTTGTTTTTGT--------TT-----C---C-C----C--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................GTTCAAGCAGAATCTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020100100
..CAAACGGTTCAGGAGTTCAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000110
...................CAAGCAGAATCTCGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0021000100
........................AGAATCTCGAGGAGCTCATTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.................................................................................................................GGCGC---------------------------------------------CACTGTGTCA--TACTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
........GTTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...........................ATCTCGAGGAGCTCATTCCCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.....ACGGTTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAACAGC---------------------------------------------------------------------------------------------TTTTAAAACAG.........................................................................................................................2211.0011000000
.........................GAATCTCGAGGAGCTCATTCCCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..........................AATCTCGAGGAGCTCATTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..........................AATCTCGAGGAGCTCATTCCCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.........................GAATCTCGAGGAGCTCATTCCCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATTGAGA---AC---------A-------GATAGA...........................................................................................................................................................................................................................................2011.0010001000
..CAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
TCCAAACGGTTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
TCCAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
................GTTCAAGCAGAATCTCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...................CAAGCAGAATCTCGAGGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTAATTCGCCAATGGCT...............................................................................................................................................................................................................................................................................................................2011.0010001000
.CCAAACGGTTCAGGAGTTCAAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.CCAAACGGTTCAGGAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..CAAACGGTTCAGGAGTTCAAGCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...................CAAGCAGAATCTCGAGGAGCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000

Generated: 05/16/2015 at 09:12 PM