dvi_12731

Name	Class	Family	Strand
Gypsy15-I_Dya-int	LTR	Gypsy	-

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CACAGCAGAGATGCAACATCTAGATCAAATGGATATACTGCTTGCAGCTCGTAAGCGTGTTGCAGATCTAGAAATGGCAATGAGGAAAATTGATATCGTTGCAATGCCCAAAGAGTCAGCGCCGAAAGTTGTGCTCAGGGTGACATAGAAGCATATTTACGTACATTTTCTGGCGACGACAACTACGCTGTCCGAATCTAGATACGCGATTTTGAGGAGGTCATGCAAGCATATAACATTGCAAAAATGCA ************************************************...(((((((((.....((((((((((((((((............)))))))..(((((...((((((((.......)))).)))).)))))((.((((......)))).)).)).)))))))......)))).)))))............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060676 9xArg_ovaries_total	V116 male body	SRR060663 160_0-2h_embryos_total	SRR060682 9x140_0-2h_embryos_total	SRR060686 Argx9_0-2h_embryos_total	M047 female body	V053 head
......................................TGCTTGCAGCTCGTAAGCGTGT...............................................................................................................................................................................................	22	0	2	0.50	1	1	0	0	0	0	0	0
......................................................................................AAAAAGATATCGTTGCAAT..................................................................................................................................................	19	2	7	0.29	2	0	0	1	1	0	0	0
........................................................................AATGGTGATGAGGAAAATTG...............................................................................................................................................................	20	2	4	0.25	1	0	1	0	0	0	0	0
..............................................................................AATCAGGTATATTGATATCGT........................................................................................................................................................	21	3	6	0.17	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................................TGAGGATGTGACGCAAGCAT...................	20	3	13	0.08	1	0	0	0	0	0	0	1
.....................................................................................................AAATGCCCAAGGAGTCAGAG..................................................................................................................................	20	3	13	0.08	1	0	0	1	0	0	0	0
.....................................................................AGAAATGGGGATGAGGGAAA..................................................................................................................................................................	20	3	15	0.07	1	0	0	0	0	0	1	0
..........................................................................................................CCCCAAGAGTCATCGACG...............................................................................................................................	18	3	20	0.05	1	0	0	0	1	0	0	0
...................................................................................................................................................................................................................CTGGGGATGTCATGCAAG......................	18	3	20	0.05	1	0	0	0	0	0	1	0

GTGTCGTCTCTACGTTGTAGATCTAGTTTACCTATATGACGAACGTCGAGCATTCGCACAACGTCTAGATCTTTACCGTTACTCCTTTTAACTATAGCAACGTTACGGGTTTCTCAGTCGCGGCTTTCAACACGAGTCCCACTGTATCTTCGTATAAATGCATGTAAAAGACCGCTGCTGTTGATGCGACAGGCTTAGATCTATGCGCTAAAACTCCTCCAGTACGTTCGTATATTGTAACGTTTTTACGT ************************************************...(((((((((.....((((((((((((((((............)))))))..(((((...((((((((.......)))).)))).)))))((.((((......)))).)).)).)))))))......)))).)))))............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M027 male body	M047 female body	SRR060671 9x160_males_carcasses_total	V116 male body
.........................................................................................................CGGGTTTCTCAGTCGCGGCT..............................................................................................................................	20	0	1	1.00	1	1	0	0	0
...............................................................................................AGCAACGTTACGGGTTTCTCA.......................................................................................................................................	21	0	1	1.00	1	0	1	0	0
..............................................................................................................................................TGTATCTTCGTATCAATGGT.........................................................................................	20	3	11	0.09	1	0	0	1	0
..................................................................................................AGCGTTACCGGTTTCTCATT.....................................................................................................................................	20	3	16	0.06	1	0	0	0	1

Species	Coordinate	ID	Alignment
droVir3	scaffold_12970:675916-676166 -	dvi_12731	CACAG-CAGAGATGCAACATCTAGATCAAATGGATATACTGCTTGCAGCTCGTAAGCGTGTTGCAGATCTAGAAATGGCAATG-----------------------AGGAAAATTGATATCGTTGCA-----------ATGCCCAAAGAGTCAGCGCCGAAAGTTGTGCTCAGGGT----GACATAGAAGCATATTTACGTACATTTTCTGGCGACGACAACTACGCTGTCCGAATCTAGATACGCGATTTTGAGGAGGTCATGCAAGCATATAACATTGCAAAAATGCA
droWil2	scf2_1100000004902:7416586-7416695 -		GATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAACTACTGTACCTAAATTCTCTGGTGATGGTGATCTGTCCATTCACGTATGGATTCGTGAGCTGGAGAAAGCAGCAAGAGTGTATGTACTGAGTGATGACCA
dp5	Unknown_group_30:55569-55820 -		CGAAG-AAGACTCGCCCCGTTTGCAGCAGTTGGAACAATTGTACGTTTCTCGCAAGCGCTTAGCTGATCTCAAA-------TTAAGCATATTGAAAACGGAGAAAG----------------AGGCTATGGAGTTGGAAA-CGCCGAGAGATTGC-------------ATCGACTTGACACACATTGAGGCGTTGATGCGTCCATTTTCTGGAGATGACGACCAGGCTGTAACCAGTTGGATAAGTAACTTTGAGGACATTATGAATTTCTATGGTGTATCCGAGTCAAA
droPer2	scaffold_517:2368-2607 -		CGAAG-AAGAATCGCGCCGTTTGCAGCAGTTGGAACAATTGTACGTCTCTCGCAAGCGCTTAGCTGATCTCAAA-------TTAAGCATATTGAAAACGGAGAAAG----------------AGGCTTTGGAGTTAGAAA-CGCCGAGAGATTGC-------------ATCGACTTGACACACATTGAGGCGTTGATGCGTCCATTTTCTGGAGATGACGACCAGGCTGTAACCAGTTGGATAAGTAACTTTGAGGACATTATGAATATTATGGATAT------------
droKik1	scf7180000301584:28274-28519 -		TCCAGTTAGAGATGCAGCATTTAAACAATTTGGTAAACTTATAC----CTCGCAAGCGTGTTGCCGAACTTGAAACAGA-------CATGAAGGTGATGGGAGTTGGATCAAAGGGA-------------------ATGAAC-AAGAATGACGTC-------------ATTGATATAAAAGATGTTGAAGCCCTGATTCAATGTTTTTCTGGAGATGATGGGTATCCGATTCTGCGCTGGATAAATGATTTCGAACACATAATGAACACCTACGACGTACCAGATCACCG
droFic1	scf7180000453387:4063-4293 -		GG----CAGAGCTACAATACCTACAGCAAGTCGAAAAGATGTACGCTGCGCGTAAACGTGTGGCTGATTTGGAAAAAGCGCTG-----------------------AACCAAAACAA-------------------ACCAACTCAAGAAGCCGAC-------------ATCGGTATTAGTGATCTGGACGCCCTAATTCAACCGTTCTCTGGGGACAATAGATACCCTGTGCTGCGCTGGGTCGACGACTTTTCAAATATCATGGACACATATGGCGTGTCGCAGAAAAA
droEle1	scf7180000488243:11717-11808 -		GACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAATCAACCTTGCGAAATTTCTCTAGAGATGATCACGTTGGTGTTCATGCATGGATCCGTGAGGTGGACTTGGCTG------------------CTGCTACACA
droRho1	scf7180000777643:4129-4353 -		G-----CAGAAATCCAACATTTGCAACATATCGAGAAGCTGTATGTTACGCGTAAACGGGTAGCTGACCTAGAAAA-----TT-----------------------AGCCAAAATAA-------------------ACCCGCTCGAGGAGATGGC-------------ATCGATATGAATGATTTGGACGCCCTAATTCAACGTTTTTCTGGAGACTACGGATACCCTGTGATGCGTTGGATTGAATACTATATGAATATCATGGATTCATAGAACGTATCGAAGAAAAA
droBia1	scf7180000300701:5311-5544 -		CGAGG-CAGAACTACAACATCTATAGCAAGACGAAAAATTTTACGCTGCGCGTAAACGTGTGACCGATTTGGAAAAAGAGTTG-----------------------ACCCGAAATAA-------------------ATTACCTCAAGAAACCGAC-------------ATCGAAATCAGTGATCTGGACGCCCTAATTTAACCGCTTTCTGGGGACAATGGATACCCTGTACTACGTTGGAACCACTACTTTTTAAATATTATGGATATATATGGCGTGCCGGAGAAAAA
droTak1	scf7180000414304:39281-39514 +		CGAGG-CAGAGCTACAACACCTACAGCAAATCGAGAAGCTGTACGCTGCGCGTAAACGTGTGGATGATTTGGAAAAAGAGTTG-----------------------AACCAAAATAA-------------------ATTAACTCAAGAAACCGAC-------------ATCGATATCAGTGATCTGGACGCCCTAATTCAACCGTTTTCTGGGGACAACGGATACCCTGTATTACGTTGGATCGACGACTTTTCAAATATAATGGATATATATGAGGTGCCGGAGAAAAA
droEug1	scf7180000409171:32255-32376 +		G------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATGTCAGGGATCTTGAGGCTAGTTTGCGCAAATTTTCTGGAGACGATAACATGTCTGTGCACGTTTGGATTCGTGACCTCGAGCTTGCTGCAGTTACGCACGGATTAAGCAACTCTCA
droYak3	3R:7404674-7404920 -		CACAGTTAGAGATGCAGCATTTAAACAACTTGGAAAACTTGTACCTAGCTCGTAGGCGTGTTGCTGAACTGGAAGCAGATTTTAAGTTAATGGAAGGAGGAGCAAG------------------------------AACCGTGAGAAATGACGTC-------------ATTGGGATGAAAGACATAGAAGCCTTGATTAATTGTTTTTCGGGAGATGATGGCTACCCGATACGGCGTTGGATAAATGACTTTGAGCATATAATGAACACGTATGACGTACCAGATCAACG
droEre2	scaffold_4929:24159008-24159237 -		G-----CAGAAATACAATATCTACAGGAAGTTGAGAGGCTGTACGCTGCGCGCAAACGAGTGGCTGATTTAGAAAATGAGTTG-----------------------GGACAAAATAA-------------------ATCAGCTCAAGAAGACAAC-------------ATCTATATGAGTGATTTGGATGCCCTAATTCAATCGTTTTCTAGAGACAATGGATACCCTGTGCTGCGTTGGATCGACGACTTTTCGAATATAATGGATATATATTGCGTGCCGGAGAAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

CACAG-CAGAGATGCAACATCTAGATCAAATGGATATACTGCTTGCAGCTCGTAAGCGTGTTGCAGATCTAGAAATGGCAATG-----------------------AGGAAAATTGATATCGTTGCA-----------ATGCCCAAAGAGTCAGCGCCGAAAGTTGTGCTCAGGGT----GACATAGAAGCATATTTACGTACATTTTCTGGCGACGACAACTACGCTGTCCGAATCTAGATACGCGATTTTGAGGAGGTCATGCAAGCATATAACATTGCAAAAATGCA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.......................................TGCTTGCAGCTCGTAAGCGTGT.....................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droWil2

GATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAACTACTGTACCTAAATTCTCTGGTGATGGTGATCTGTCCATTCACGTATGGATTCGTGAGCTGGAGAAAGCAGCAAGAGTGTATGTACTGAGTGATGACCA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................................................................................................................................................................................................................GTGATGGTGATCTGTCCATTCACG.......................................................	24	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................CAAGAGTGTATGTACTGAGTGAT.....	23	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................GTGATCTGTCCATTCACGTATGGAT................................................	25	20	0.05	1	0	1	0	0	0
................................................................................................................................................................................................ACTGTACCTAAATTCTCTGGTGA...........................................................................	23	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................................................................................................GGATTCGTGAGCTGGAGAAAGCAGA...........................	25	20	0.05	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................GAAAGCAGCAAGAGTGTATGTACTGAGT........	28	20	0.05	1	0	0	1	0	0

dp5

CGAAG-AAGACTCGCCCCGTTTGCAGCAGTTGGAACAATTGTACGTTTCTCGCAAGCGCTTAGCTGATCTCAAA-------TTAAGCATATTGAAAACGGAGAAAG----------------AGGCTATGGAGTTGGAAA-CGCCGAGAGATTGC-------------ATCGACTTGACACACATTGAGGCGTTGATGCGTCCATTTTCTGGAGATGACGACCAGGCTGTAACCAGTTGGATAAGTAACTTTGAGGACATTATGAATTTCTATGGTGTATCCGAGTCAAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTTG...............................................................................................	25	6	13.83	83	0	83	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGT.................................................................................................	23	6	7.17	43	0	37	2	0	0	0	1	1	2	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCG..................................................................................................	22	6	4.83	29	0	25	1	0	2	0	0	1	0	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACATT.............................	23	9	3.89	35	0	30	0	0	0	0	0	1	4	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACATTA............................	24	9	3.56	32	0	14	1	0	0	0	0	14	3	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTT................................................................................................	24	6	3.33	20	0	19	0	0	0	0	0	0	1	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------A.......................................................................................................................................................................	23	7	2.29	16	0	8	0	0	0	0	0	5	3	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACAT..............................	22	9	2.11	19	0	9	0	0	0	0	0	7	3	0
...........................................................................................................................................................................GACTTGACACACATTGAGGCGTTG...............................................................................................	24	6	2.00	12	0	11	0	0	0	0	1	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGC...................................................................................................	21	6	2.00	12	0	8	3	0	0	0	0	0	1	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------AGG.....................................................................................................................................................................	25	7	1.86	13	0	10	1	0	0	0	2	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTTGA..............................................................................................	26	6	1.83	11	0	8	1	0	0	2	0	0	0	0
...........................AGTTGGAACAATTGTACGTTTCTC...............................................................................................................................................................................................................................................	24	10	1.60	16	0	9	0	0	0	1	0	3	3	0
.............................................................................................................................................................................................................................................TGGATAAGTAACTTTGAGGACATT.............................	24	9	1.44	13	0	0	0	0	0	0	0	10	3	0
...........................AGTTGGAACAATTGTACGTTTC.................................................................................................................................................................................................................................................	22	10	1.40	14	0	13	0	0	1	0	0	0	0	0
......................................................................................................AAAG----------------AGGCTATGGAGTTGGAAA-CGC..................................................................................................................................................	25	7	1.29	9	0	0	0	0	0	0	0	0	9	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------AG......................................................................................................................................................................	24	7	1.29	9	0	5	0	0	0	0	2	2	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGG....................................................................................................	20	7	1.14	8	0	5	0	0	1	0	0	0	2	0
................................................................TGATCTCAAA-------TTAAGCATATTGA....................................................................................................................................................................................................	23	6	1.00	6	0	6	0	0	0	0	0	0	0	0
............................................................................................................................................................................ACTTGACACACATTGAGGCGTTG...............................................................................................	23	6	0.83	5	0	5	0	0	0	0	0	0	0	0
................................................................TGATCTCAAA-------TTAAGCATATTGAAA..................................................................................................................................................................................................	25	6	0.83	5	0	4	0	0	0	0	0	1	0	0
...........................................................................................TGAAAACGGAGAAAG----------------AGGCTATGG...............................................................................................................................................................	24	10	0.80	8	0	0	0	0	0	0	0	0	8	0
........................................................................................................AG----------------AGGCTATGGAGTTGGAAA-CGC..................................................................................................................................................	23	7	0.71	5	0	0	0	0	0	0	0	0	5	0
......................................................................................CATATTGAAAACGGAGAAAG----------------AGG.....................................................................................................................................................................	23	7	0.71	5	0	1	0	0	0	0	0	0	4	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGAC................................	20	9	0.67	6	0	6	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GACTTGACACACATTGAGGCG..................................................................................................	21	6	0.67	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................TGGATAAGTAACTTTGAGGACA...............................	22	9	0.67	6	0	0	0	0	0	0	0	5	1	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACATTAT...........................	25	9	0.67	6	0	1	0	0	0	0	0	3	2	0
......................................................................................................AAAG----------------AGGCTATGGAGTTGGAAA-CG...................................................................................................................................................	24	7	0.57	4	0	1	0	0	0	0	0	0	3	0
............................................................................................................................................................................................................................................TTGGATAAGTAACTTTGAGGACATTA............................	26	9	0.56	5	0	0	0	0	0	0	0	3	2	0
.............................................................................................................................................................................................................................................TGGATAAGTAACTTTGAGGACAT..............................	23	9	0.56	5	0	0	0	0	0	0	0	2	3	0
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGACGACC...................................................................	27	8	0.50	4	0	1	1	0	0	0	0	0	2	0
...............................................................................................................................................................................TGACACACATTGAGGCGTTGATGCGT.........................................................................................	26	6	0.50	3	0	1	0	0	0	0	1	0	1	0
...........................AGTTGGAACAATTGTACGTTTCTCGCAA...........................................................................................................................................................................................................................................	28	10	0.50	5	0	0	0	0	0	0	0	5	0	0
................................................................TGATCTCAAA-------TTAAGCATATTG.....................................................................................................................................................................................................	22	6	0.50	3	0	3	0	0	0	0	0	0	0	0
...............................................................................................................................................................................TGACACACATTGAGGCGTTGATGCGTC........................................................................................	27	6	0.50	3	0	2	1	0	0	0	0	0	0	0
...........................................................................................................................................................................GACTTGACACACATTGAGGCGTTGA..............................................................................................	25	6	0.50	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GACTTGACACACATTGAGGCGT.................................................................................................	22	6	0.50	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GACTTGACACACATTGAGGC...................................................................................................	20	6	0.50	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................TTGGATAAGTAACTTTGAGGACATT.............................	25	9	0.44	4	0	0	0	0	0	0	0	2	2	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACA...............................	21	9	0.44	4	0	2	0	0	0	0	0	2	0	0
........................................................................................................................................................................................................TCCATTTTCTGGAGATGACGACCAGGC...............................................................	27	7	0.43	3	0	2	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TGTAACCAGTTGGATAAGTAACTTTGA....................................	27	7	0.43	3	0	0	0	0	0	0	0	0	3	0
.......................................................................................................................................................TTGC-------------ATCGACTTGACACACATTGA......................................................................................................	24	7	0.43	3	0	0	0	0	0	0	0	2	1	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------........................................................................................................................................................................	22	7	0.43	3	0	0	0	0	0	0	0	3	0	0
.........................................................................................................G----------------AGGCTATGGAGTTGGAAA-CGCC.................................................................................................................................................	23	7	0.43	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................................AGAGATTGC-------------ATCGACTTGACACAC...........................................................................................................	24	7	0.43	3	0	3	0	0	0	0	0	0	0	0
...........................AGTTGGAACAATTGTACGTTT..................................................................................................................................................................................................................................................	21	10	0.40	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AAGTAACTTTGAGGACATTATGAAT.......................	25	10	0.40	4	0	4	0	0	0	0	0	0	0	0
...........................................................................................TGAAAACGGAGAAAG----------------AGGCTAT.................................................................................................................................................................	22	11	0.36	4	0	0	0	0	0	0	0	0	4	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACAA..............................	22	9	0.33	3	0	0	0	0	0	0	0	0	3	0
........................................................................................................................................................TGC-------------ATCGACTTGACACACATTGAGGC...................................................................................................	26	6	0.33	2	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................................GACTTGACACACATTGAGGCGTT................................................................................................	23	6	0.33	2	0	2	0	0	0	0	0	0	0	0
...........................AGTTGGAACAATTGTACGTTTCTCGC.............................................................................................................................................................................................................................................	26	10	0.30	3	0	3	0	0	0	0	0	0	0	0
.................................AACAATTGTACGTTTCTCGCAAGCGCTT.....................................................................................................................................................................................................................................	28	10	0.30	3	0	0	0	0	0	0	0	3	0	0
...........................AGTTGGAACAATTGTACGTTTCTCG..............................................................................................................................................................................................................................................	25	10	0.30	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................CCAGTTGGATAAGTAACTTTGAGGACA...............................	27	7	0.29	2	0	0	0	0	0	0	0	0	2	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------AGGCT...................................................................................................................................................................	27	7	0.29	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGACGACCA..................................................................	28	7	0.29	2	0	0	0	0	0	0	0	0	2	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------AA......................................................................................................................................................................	24	7	0.29	2	0	2	0	0	0	0	0	0	0	0
...................................................................................AAGCATATTGAAAACGGAGAAAG----------------A.......................................................................................................................................................................	24	7	0.29	2	0	0	0	0	0	0	0	2	0	0
..................................................................................................................................................AGAGATTGC-------------ATCGACTTGACAC.............................................................................................................	22	7	0.29	2	0	1	1	0	0	0	0	0	0	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------AGGC....................................................................................................................................................................	26	7	0.29	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................CCAGTTGGATAAGTAACTTTGAGGACAT..............................	28	7	0.29	2	0	0	0	0	0	0	0	0	2	0
.......................................................................................................AAG----------------AGGCTATGGAGTTGGAAA-CGC..................................................................................................................................................	24	7	0.29	2	0	0	0	0	0	0	0	0	2	0
..................................................................................TAAGCATATTGAAAACGGAGAAAG----------------AGGC....................................................................................................................................................................	28	7	0.29	2	0	0	0	0	0	0	0	0	2	0
.................................AACAATTGTACGTTTCTCGCAAGC.........................................................................................................................................................................................................................................	24	11	0.27	3	0	0	1	0	0	0	0	0	2	0
...................................................................................................................................................................................................................GAGATGACGACCAGGCTGTAACC........................................................	23	8	0.25	2	0	0	0	0	0	0	0	2	0	0
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGACG......................................................................	24	8	0.25	2	0	0	0	0	2	0	0	0	0	0
......................................................................................................................................................................................................................ATGACGACCAGGCTGTAACCAGTT....................................................	24	8	0.25	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGACGAA....................................................................	26	8	0.25	2	0	0	0	0	0	0	0	0	2	0
.............................................................................................................................................................................................................................................TGGATAAGTAACTTTGAGGACATTA............................	25	9	0.22	2	0	0	0	0	0	0	0	2	0	0
...............................................................................................................................................................................................................TCTGGAGATGACGACCAGGCTG.............................................................	22	9	0.22	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................GATAAGTAACTTTGAGGACATTA............................	23	9	0.22	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................AGGCTATGGAGTTGGAAA-CGC..................................................................................................................................................	21	9	0.22	2	0	0	0	0	0	0	0	1	1	0
..............................................................................................................................TATGGAGTTGGAAA-CGCCGAGAGA...........................................................................................................................................	24	9	0.22	2	0	1	0	0	0	0	1	0	0	0
...............................................................................................AACGGAGAAAG----------------AGGCTATGGAG.............................................................................................................................................................	22	9	0.22	2	0	0	0	0	0	0	0	2	0	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGG..................................	18	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.......................................TGTACGTTTCTCGCAAGCGCTTAGC..................................................................................................................................................................................................................................	25	9	0.22	2	0	0	0	0	0	0	0	2	0	0
..............................................................................................................................TATGGAGTTGGAAA-CGCCGA...............................................................................................................................................	20	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TTTCTGGAGATGACGACCAGGC...............................................................	22	9	0.22	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................AAAG----------------AGGCTATGGAGTTGGAAA-.....................................................................................................................................................	22	9	0.22	2	0	0	0	0	0	0	0	2	0	0
................................................................................................ACGGAGAAAG----------------AGGCTATGG...............................................................................................................................................................	19	10	0.20	2	0	0	0	0	0	0	0	1	1	0
............................GTTGGAACAATTGTACGTTTCTC...............................................................................................................................................................................................................................................	23	10	0.20	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................GTAACTTTGAGGACATTATGAATTT.....................	25	10	0.20	2	0	0	0	0	0	0	0	0	2	0
..................................................................................................................................................................................................................GGAGATGACGACCAGGCTGTAAA.........................................................	23	10	0.20	2	0	0	0	0	0	0	0	2	0	0
................................................................................................ACGGAGAAAG----------------AGGCTATGGA..............................................................................................................................................................	20	10	0.20	2	0	0	0	0	0	0	0	2	0	0
........................................................................................TATTGAAAACGGAGAAAG----------------AGGCTA..................................................................................................................................................................	24	10	0.20	2	0	0	0	0	0	0	0	1	1	0
...........................AGTTGGAACAATTGTACGTTTCT................................................................................................................................................................................................................................................	23	10	0.20	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................GGAGATGACGACCAGGCTGTA...........................................................	21	10	0.20	2	0	0	0	0	0	0	0	2	0	0
........................................................................................TATTGAAAACGGAGAAAG----------------AGG.....................................................................................................................................................................	21	10	0.20	2	0	1	0	0	0	0	0	0	1	0
...........................................................................................TGAAAACGGAGAAAG----------------AGGC....................................................................................................................................................................	19	11	0.18	2	0	0	0	0	0	0	0	2	0	0
.................................AACAATTGTACGTTTCTCGCAAGCGC.......................................................................................................................................................................................................................................	26	11	0.18	2	0	0	0	0	0	0	0	0	2	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTTGATA............................................................................................	28	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCAA.................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTTGATG............................................................................................	28	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................TTAGCTGATCTCAAA-------TTAAGCATATTG.....................................................................................................................................................................................................	27	6	0.17	1	0	0	0	0	0	0	0	1	0	0
..............................................................................................................................................................................TTGACACACATTGAGGCGTTG...............................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................GACTTGACACACATTGAGGCGTTGATG............................................................................................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................CTTAGCTGATCTCAAA-------TTAAG............................................................................................................................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................TGC-------------ATCGACTTGACACACATTGAGGCG..................................................................................................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................................TAGCTGATCTCAAA-------TTAAGCATAT.......................................................................................................................................................................................................	24	6	0.17	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................TGACACACATTGAGGCGTTGATGCGA.........................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
................................................................TGATCTCAAA-------TTAAGCATATTGAA...................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................ACTTGACACACATTGAGGCGT.................................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................GACACACATTGAGGCGTTGATG............................................................................................	22	6	0.17	1	0	1	0	0	0	0	0	0	0	0
....................................................CAAGCGCTTAGCTGATCTCAAA-------TT...............................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.....................................................................TCAAA-------TTAAGCATATTGAAAACGGAGA...........................................................................................................................................................................................	27	6	0.17	1	0	0	0	0	0	0	0	0	1	0
...................................................................TCTCAAA-------TTAAGCATATTGAAAACGG..............................................................................................................................................................................................	26	6	0.17	1	0	0	0	0	0	0	0	0	1	0
................................................................TGATCTCAAA-------TTAAGCATATTGAAAAC................................................................................................................................................................................................	27	6	0.17	1	0	0	0	0	0	0	0	0	1	0
.........................................................................A-------TTAAGCATATTGAAAACGGAGA...........................................................................................................................................................................................	23	6	0.17	1	0	0	0	0	0	0	1	0	0	0
..............................................................GCTGATCTCAAA-------TTAAGCATATTG.....................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................ACACATTGAGGCGTTGATGC...........................................................................................	20	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................TGC-------------ATCGACTTGACACACATTGAGGCGT.................................................................................................	28	6	0.17	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................ACTTGACACACATTGAGGCGTTGA..............................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................ACACACATTGAGGCGTTGATG............................................................................................	21	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................AAA-------TTAAGCATATTGAAAACGGAGA...........................................................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................CACACATTGAGGCGTTGATGC...........................................................................................	21	6	0.17	1	0	0	1	0	0	0	0	0	0	0
...................................................................TCTCAAA-------TTAAGCATATTGAAAACGGA.............................................................................................................................................................................................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................................................GATCTCAAA-------TTAAGCATATTGAAAA.................................................................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................TTGACACACATTGAGGCGT.................................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................ACACACATTGAGGCGTTGATGCGT.........................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................ATCGACTTGACACACATTGAGGC...................................................................................................	23	6	0.17	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................CAGGCTGTAACCAGTTGGATAAG.............................................	23	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGC.................................................................................................	23	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CAGTTGGATAAGTAACTTTGAG...................................	22	7	0.14	1	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................GGAAA-CGCCGAGAGATTGC-------------ATCGACT...................................................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CAGTTGGATAAGTAACTTTGAGGACA...............................	26	7	0.14	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................GAGTTGGAAA-CGCCGAGAGATTGC-------------ATC.......................................................................................................................	27	7	0.14	1	0	0	1	0	0	0	0	0	0	0
..................................................................................TAAGCATATTGAAAACGGAGAAAG----------------AG......................................................................................................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CAGGCTGTAACCAGTTGGATAAGTAACT........................................	28	7	0.14	1	0	0	0	0	0	0	0	1	0	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------AGA.....................................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0
....................................................................................AGCATATTGAAAACGGAG............................................................................................................................................................................................	18	7	0.14	1	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................AGAGATTGC-------------ATCGACTTGACA..............................................................................................................	21	7	0.14	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................AGAGATTGC-------------ATCGACTTGACACACA..........................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TCTGGAGATGACGACCAGGCTGTAACCA.......................................................	28	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................GAAAG----------------AGGCTATGGAGTTGGAAA-CGC..................................................................................................................................................	26	7	0.14	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................TGC-------------ATCGACTTGACACACATTG.......................................................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................TAACCAGTTGGATAAGTAACTTTGA....................................	25	7	0.14	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................AAAG----------------AGGCTATGGAGTTGGAAA-C....................................................................................................................................................	23	7	0.14	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................TGGAGTTGGAAA-CGCCGAGAGATT.........................................................................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................G----------------AGGCTATGGAGTTGGAAA-CGCCGAG..............................................................................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................GAGTTGGAAA-CGCCGAGAGATTG........................................................................................................................................	23	7	0.14	1	0	0	0	0	0	0	1	0	0	0
.....................................................................................................................................TTGGAAA-CGCCGAGAGATTGC-------------ATCGACT...................................................................................................................	28	7	0.14	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................GAGTTGGAAA-CGCCGAGAGATTGC-------------..........................................................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................GCATATTGAAAACGGAGAAAG----------------AGG.....................................................................................................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................G----------------AGGCTATGGAGTTGGAAA-CGCCGA...............................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................AGAGATTGC-------------ATCGACTTGACACACAT.........................................................................................................	26	7	0.14	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................TTGGAAA-CGCCGAGAGATTGC-------------AT........................................................................................................................	23	7	0.14	1	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................AAA-CGCCGAGAGATTGC-------------A.........................................................................................................................	18	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CAGTTGGATAAGTAACTTTGAGGA.................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGA......................................................................................................	18	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................TTGC-------------ATCGACTTGACACACATTGAGG....................................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................GCATATTGAAAACGGAGAAAG----------------A.......................................................................................................................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0
......................................................................................CATATTGAAAACGGAGAAAG----------------AGGC....................................................................................................................................................................	24	7	0.14	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................................GAAAG----------------AGGCTATGGAGTTGGAAA-C....................................................................................................................................................	24	7	0.14	1	0	0	0	0	0	0	0	1	0	0
.....................................................................................GCATATTGAAAACGGAGAAAG----------------AG......................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GACGACCAGGCTGTAACCAGTTGG..................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTGGAAA-CGCCGAGAGATTGC-------------ATC.......................................................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TTGGAAA-CGCCGAGAGATTGC-------------..........................................................................................................................	21	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................GGAGTTGGAAA-CGCCGAGAGAT..........................................................................................................................................	22	7	0.14	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................TGGAGTTGGAAA-CGCCGAGAGATTA........................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CAGTTGGATAAGTAACTTTGAGGACC...............................	26	7	0.14	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................AA-CGCCGAGAGATTGC-------------ATCGACT...................................................................................................................	23	7	0.14	1	0	1	0	0	0	0	0	0	0	0
..................................................................................TAAGCATATTGAAAACGGAGAAAG----------------AGG.....................................................................................................................................................................	27	7	0.14	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................ATGGAGTTGGAAA-CGCCGAGAGATT.........................................................................................................................................	25	7	0.14	1	0	0	0	0	0	0	0	0	1	0
....................................................................................AGCATATTGAAAACGGAGAAAG----------------AGGCTA..................................................................................................................................................................	28	7	0.14	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................TGGAAA-CGCCGAGAGATTGC-------------ATCGA.....................................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0
....................................................................................AGCATATTGAAAACGGAGAAA.........................................................................................................................................................................................	21	7	0.14	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGACGAC....................................................................	26	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................TGGAGATGACGACCAGGCTGTAACC........................................................	25	8	0.13	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................TGACGACCAGGCTGTAACCAGTT....................................................	23	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TGGAGATGACGACCAGGCTGTAACCAAA.....................................................	28	8	0.13	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................TCCATTTTCTGGAGATGACGACC...................................................................	23	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CCATTTTCTGGAGATGACGACCAGT................................................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TGTAACCAGTTGGATAAGTAACTT.......................................	24	8	0.13	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................ATGACGACCAGGCTGTAACCAGT.....................................................	23	8	0.13	1	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGACGA.....................................................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGA........................................................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................TAACCAGTTGGATAAGTAACTTTG.....................................	24	8	0.13	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................GTTGGATAAGTAACTTTGAGGACA...............................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TTTTCTGGAGATGACGACCAGGC...............................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
................................................................................................ACGGAGAAAG----------------AGGCTATGGAGTTG..........................................................................................................................................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................ATTTTCTGGAGATGACGACCA..................................................................	21	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TTCTGGAGATGACGACCAGGCT..............................................................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................ATGGAGTTGGAAA-CGCCGAGAGA...........................................................................................................................................	23	9	0.11	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................TTGATGCGTCCATTTTCTGGA.............................................................................	21	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TTTCTGGAGATGACGACCAGGCTA.............................................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TCTGGAGATGACGACCAGGCTGTAAC.........................................................	26	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TTTCTGGAGATGACGACCAGGCTG.............................................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
....................................AATTGTACGTTTCTCGCAAGCGCTTA....................................................................................................................................................................................................................................	26	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.....................TGCAGCAGTTGGAACAATTGTACG.....................................................................................................................................................................................................................................................	24	9	0.11	1	0	0	0	0	1	0	0	0	0	0
.........................GCAGTTGGAACAATTGTACGTTTCTCG..............................................................................................................................................................................................................................................	27	9	0.11	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACATTATG..........................	26	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................AGTTGGATAAGTAACTTTGAGG..................................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................GAGTTGGAAA-CGCCGAGAA............................................................................................................................................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................GGAGAAAG----------------AGGCTATGGAGTTGGAAA-.....................................................................................................................................................	26	9	0.11	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................CTGGAGATGACGACCAGGCTGTAA..........................................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0
................................................................................................ACGGAGAAAG----------------AGGCTATGGAGTTGG.........................................................................................................................................................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TTTTCTGGAGATGACGACCAGGCTG.............................................................	25	9	0.11	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................GAGTTGGAAA-CGCCGAGA.............................................................................................................................................	18	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TCTGGAGATGACGACCAGGCTGTA...........................................................	24	9	0.11	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................GATAAGTAACTTTGAGGAC................................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.........................................TACGTTTCTCGCAAGCGCTTAGCTGAA..............................................................................................................................................................................................................................	27	9	0.11	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................TCTGGAGATGACGACCAGGCTGTAAA.........................................................	26	9	0.11	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................AAG----------------AGGCTATGGAGTTGGAAA-.....................................................................................................................................................	21	9	0.11	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................AGTTGGATAAGTAACTTTGAGGACGA..............................	26	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................TGAAAACGGAGAAAG----------------AGGCTATGGAG.............................................................................................................................................................	26	9	0.11	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................TTTCTGGAGATGACGACCAGGT...............................................................	22	9	0.11	1	0	1	0	0	0	0	0	0	0	0
......................................TTGTACGTTTCTCGCAAGCGCTTAGC..................................................................................................................................................................................................................................	26	9	0.11	1	0	1	0	0	0	0	0	0	0	0
........................................GTACGTTTCTCGCAAGCGCTTAGCT.................................................................................................................................................................................................................................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................TTTCTGGAGATGACGACCAGGCT..............................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................TTCTGGAGATGACGACCAGGCTGTAACA........................................................	28	9	0.11	1	0	0	0	0	0	0	0	0	1	0
........................AGCAGTTGGAACAATTGTACGTTTCTC...............................................................................................................................................................................................................................................	27	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.............................TTGGAACAATTGTACGTTT..................................................................................................................................................................................................................................................	19	10	0.10	1	0	1	0	0	0	0	0	0	0	0
........................................................................................TATTGAAAACGGAGAAAG----------------AGGC....................................................................................................................................................................	22	10	0.10	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................AAGTAACTTTGAGGACATTATGAA........................	24	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TGGAGATGACGACCAGGCTGTAAC.........................................................	24	10	0.10	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGAA................................	20	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TGGAGATGACGACCAGGCT..............................................................	19	10	0.10	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................TGAAAACGGAGAAAG----------------AGGCTATGGA..............................................................................................................................................................	25	10	0.10	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................GAGATGACGACCAGGCTGTAAC.........................................................	22	10	0.10	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AAGTAACTTTGAGGACATTATGA.........................	23	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.............................TTGGAACAATTGTACGTTTCTC...............................................................................................................................................................................................................................................	22	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.....................................ATTGTACGTTTCTCGCAAGCGCT......................................................................................................................................................................................................................................	23	10	0.10	1	0	0	1	0	0	0	0	0	0	0
.............................................................................................AAAACGGAGAAAG----------------AGGCTATG................................................................................................................................................................	21	10	0.10	1	0	1	0	0	0	0	0	0	0	0
......................................TTGTACGTTTCTCGCAAGCGCTT.....................................................................................................................................................................................................................................	23	10	0.10	1	0	1	0	0	0	0	0	0	0	0
.............................TTGGAACAATTGTACGTTTCT................................................................................................................................................................................................................................................	21	10	0.10	1	0	0	0	0	0	0	0	0	1	0
...........................AGTTGGAACAATTGTACGTTTCTCGCA............................................................................................................................................................................................................................................	27	10	0.10	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................AAGTAACTTTGAGGACATTATGAATT......................	26	10	0.10	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................AAACGGAGAAAG----------------AGGCTATGGA..............................................................................................................................................................	22	10	0.10	1	0	0	0	0	0	0	1	0	0	0
...........................AGTTGGAACAATTGTACGTT...................................................................................................................................................................................................................................................	20	10	0.10	1	0	1	0	0	0	0	0	0	0	0
...........................AGTTGGAACAATTGTACGTTTG.................................................................................................................................................................................................................................................	22	10	0.10	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................TGAAAACGGAGAAAG----------------AGGCTATG................................................................................................................................................................	23	10	0.10	1	0	0	0	0	0	0	0	1	0	0
..........................................................................................TTGAAAACGGAGAAAG----------------AGGCTA..................................................................................................................................................................	22	11	0.09	1	0	0	0	0	0	0	0	1	0	0
...............................GGAACAATTGTACGTTTCTCGCAAGCGC.......................................................................................................................................................................................................................................	28	11	0.09	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................AACGGAGAAAG----------------AGGCTAT.................................................................................................................................................................	18	11	0.09	1	0	0	0	0	0	0	0	0	1	0
................................GAACAATTGTACGTTTCTCGCAAGCG........................................................................................................................................................................................................................................	26	11	0.09	1	0	1	0	0	0	0	0	0	0	0
.....................................ATTGTACGTTTCTCGCAAGC.........................................................................................................................................................................................................................................	20	11	0.09	1	0	1	0	0	0	0	0	0	0	0
.................................AACAATTGTACGTTTCTCGC.............................................................................................................................................................................................................................................	20	11	0.09	1	0	0	0	0	0	0	0	1	0	0
..........................................................................................TTGAAAACGGAGAAAG----------------AGG.....................................................................................................................................................................	19	11	0.09	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................AACTTTGAGGACATTATGAA........................	20	11	0.09	1	0	1	0	0	0	0	0	0	0	0

droPer2

CGAAG-AAGAATCGCGCCGTTTGCAGCAGTTGGAACAATTGTACGTCTCTCGCAAGCGCTTAGCTGATCTCAAA-------TTAAGCATATTGAAAACGGAGAAAG----------------AGGCTTTGGAGTTAGAAA-CGCCGAGAGATTGC-------------ATCGACTTGACACACATTGAGGCGTTGATGCGTCCATTTTCTGGAGATGACGACCAGGCTGTAACCAGTTGGATAAGTAACTTTGAGGACATTATGAATATTATGGATAT------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTTG...............................................................................................	25	19	0.53	10	0	10	0	0	0	0
....................................................................................................AGAAAG----------------AGGCTTTGGAGTTAGA........................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGT.................................................................................................	23	19	0.16	3	0	3	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCG..................................................................................................	22	20	0.15	3	0	3	0	0	0	0
..............................................................................................................................................................................................................................................GGATAAGTAACTTTGAGGACATTA............................	24	20	0.15	3	0	3	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGG....................................................................................................	20	20	0.10	2	0	2	0	0	0	0
...............................................................................................................................................................................................................................................GATAAGTAACTTTGAGGACATT.............................	22	20	0.10	2	0	2	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTT................................................................................................	24	19	0.05	1	0	1	0	0	0	0
...........................................................................................................................................................................GACTTGACACACATTGAGGCGTTGA..............................................................................................	25	19	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTTGA..............................................................................................	26	19	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................CGACTTGACACACATTGAGGCGTTGT..............................................................................................	26	19	0.05	1	0	1	0	0	0	0
.................................................................................................................................................................................................TGATGCGTCCATTTTCTGGAGATGA........................................................................	25	20	0.05	1	0	1	0	0	0	0
........................................................................................................................................GAAA-CGCCGAGAGATTGC-------------ATCGACT...................................................................................................................	25	20	0.05	1	0	0	0	0	0	1
....................................................................................................................................................................................................TGCGTCCATTTTCTGGAGATGACGACC...................................................................	27	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................GCCGAGAGATTGC-------------ATCGACTTGA................................................................................................................	23	20	0.05	1	0	1	0	0	0	0
............................................................................................GAAAACGGAGAAAG----------------AGGC....................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
.................................................................GATCTCAAA-------TTAAGCATATTGA....................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
CGAAG-AAGAATCGCGCCGTTTGC..........................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	1
..............CGCCGTTTGCAGCAGTTGGAACA.............................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	1
............................................................................................................................................................................................................TTTTCTGGAGATGACGACCAGGCTG.............................................................	25	20	0.05	1	0	1	0	0	0	0
......AAGAATCGCGCCGTTTGCA.........................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
................................................................TGATCTCAAA-------TTAAGCATATTG.....................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................................................TTCTGGAGATGACGACCAGGCTG.............................................................	23	20	0.05	1	0	1	0	0	0	0
...............................................................................................................................................................................................................TCTGGAGATGACGACCAGGCTGTAA..........................................................	25	20	0.05	1	0	1	0	0	0	0

droKik1

TCCAGTTAGAGATGCAGCATTTAAACAATTTGGTAAACTTATAC----CTCGCAAGCGTGTTGCCGAACTTGAAACAGA-------CATGAAGGTGATGGGAGTTGGATCAAAGGGA-------------------ATGAAC-AAGAATGACGTC-------------ATTGATATAAAAGATGTTGAAGCCCTGATTCAATGTTTTTCTGGAGATGATGGGTATCCGATTCTGCGCTGGATAAATGATTTCGAACACATAATGAACACCTACGACGTACCAGATCACCG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GG----CAGAGCTACAATACCTACAGCAAGTCGAAAAGATGTACGCTGCGCGTAAACGTGTGGCTGATTTGGAAAAAGCGCTG-----------------------AACCAAAACAA-------------------ACCAACTCAAGAAGCCGAC-------------ATCGGTATTAGTGATCTGGACGCCCTAATTCAACCGTTCTCTGGGGACAATAGATACCCTGTGCTGCGCTGGGTCGACGACTTTTCAAATATCATGGACACATATGGCGTGTCGCAGAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GACA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAATCAACCTTGCGAAATTTCTCTAGAGATGATCACGTTGGTGTTCATGCATGGATCCGTGAGGTGGACTTGGCTG------------------CTGCTACACA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

G-----CAGAAATCCAACATTTGCAACATATCGAGAAGCTGTATGTTACGCGTAAACGGGTAGCTGACCTAGAAAA-----TT-----------------------AGCCAAAATAA-------------------ACCCGCTCGAGGAGATGGC-------------ATCGATATGAATGATTTGGACGCCCTAATTCAACGTTTTTCTGGAGACTACGGATACCCTGTGATGCGTTGGATTGAATACTATATGAATATCATGGATTCATAGAACGTATCGAAGAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CGAGG-CAGAACTACAACATCTATAGCAAGACGAAAAATTTTACGCTGCGCGTAAACGTGTGACCGATTTGGAAAAAGAGTTG-----------------------ACCCGAAATAA-------------------ATTACCTCAAGAAACCGAC-------------ATCGAAATCAGTGATCTGGACGCCCTAATTTAACCGCTTTCTGGGGACAATGGATACCCTGTACTACGTTGGAACCACTACTTTTTAAATATTATGGATATATATGGCGTGCCGGAGAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CGAGG-CAGAGCTACAACACCTACAGCAAATCGAGAAGCTGTACGCTGCGCGTAAACGTGTGGATGATTTGGAAAAAGAGTTG-----------------------AACCAAAATAA-------------------ATTAACTCAAGAAACCGAC-------------ATCGATATCAGTGATCTGGACGCCCTAATTCAACCGTTTTCTGGGGACAACGGATACCCTGTATTACGTTGGATCGACGACTTTTCAAATATAATGGATATATATGAGGTGCCGGAGAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

G------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGATGTCAGGGATCTTGAGGCTAGTTTGCGCAAATTTTCTGGAGACGATAACATGTCTGTGCACGTTTGGATTCGTGACCTCGAGCTTGCTGCAGTTACGCACGGATTAAGCAACTCTCA	Size	Hit Count	Total Norm	Total
No Reads

droYak3

CACAGTTAGAGATGCAGCATTTAAACAACTTGGAAAACTTGTACCTAGCTCGTAGGCGTGTTGCTGAACTGGAAGCAGATTTTAAGTTAATGGAAGGAGGAGCAAG------------------------------AACCGTGAGAAATGACGTC-------------ATTGGGATGAAAGACATAGAAGCCTTGATTAATTGTTTTTCGGGAGATGATGGCTACCCGATACGGCGTTGGATAAATGACTTTGAGCATATAATGAACACGTATGACGTACCAGATCAACG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
....................................................TAGGCGTGTTGCTGAACTGGAAGCA.....................................................................................................................................................................................................................	25	1	9.00	9	0	1	0	0	0	0	0	0	0	0	8
.....................................CTTGTACCTAGCTCGTAGGCGTGTTG...................................................................................................................................................................................................................................	26	2	7.00	14	0	0	0	0	11	3	0	0	0	0	0
........................................................................................................................................................................................................................GATGGCTACCCGATACGGCGT.....................................................	21	8	5.75	46	0	1	0	0	0	1	44	0	0	0	0
...........................................................................................................................................................................................................................................GTTGGATAAATGACTTTGAGCAT................................	23	8	3.13	25	1	1	0	0	0	0	23	0	0	0	0
........................................................................................................................................................................................................................GATGGCTACCCGATACGGCGTT....................................................	22	8	3.00	24	0	1	0	0	0	0	23	0	0	0	0
....................................................................................................AGCAAG------------------------------AACCGTGAGAAATGACGTC-------------ATTG......................................................................................................................	29	8	2.88	23	19	0	0	0	0	0	4	0	0	0	0
.......................................................................................................................................................................................................................TGATGGCTACCCGATACGGCGTTGGAT................................................	27	8	2.63	21	0	0	2	0	0	0	1	0	0	0	18
.....................................CTTGTACCTAGCTCGTAGGCGTG......................................................................................................................................................................................................................................	23	2	2.50	5	1	0	0	0	1	3	0	0	0	0	0
.....................................................................................................................................................................................................................GATGATGGCTACCCGATACGGCGT.....................................................	24	8	2.38	19	0	1	0	0	0	0	18	0	0	0	0
...........................................................................CAGATTTTAAGTTAATGGAAGGAGGAG............................................................................................................................................................................................	27	7	2.29	16	4	4	0	0	1	1	6	0	0	0	0
.........................CAACTTGGAAAACTTGTACCTAGC.................................................................................................................................................................................................................................................	24	9	2.11	19	0	10	9	0	0	0	0	0	0	0	0
.............................................TAGCTCGTAGGCGTGTTGCTGAACTGGAA........................................................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
....................................................TAGGCGTGTTGCTGAACTGGAAGCAGA...................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2
................................................................................................................................................GAAATGACGTC-------------ATTGGGATGAAA..............................................................................................................	23	8	2.00	16	5	3	0	0	0	1	7	0	0	0	0
..............................................................................................................................................................................................................................TACCCGATACGGCGTTGGATAAAT............................................	24	8	2.00	16	1	1	0	0	0	0	0	0	0	0	14
.............................................................................GATTTTAAGTTAATGGAAGGAGG..............................................................................................................................................................................................	23	7	2.00	14	0	5	0	0	0	4	5	0	0	0	0
....................................................TAGGCGTGTTGCTGAACTGGAAGCAGATTT................................................................................................................................................................................................................	30	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2
.........................................TACCTAGCTCGTAGGCGTGTTGCTGAAC.............................................................................................................................................................................................................................	28	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0
.............................................................................GATTTTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	26	7	2.00	14	4	0	0	0	1	2	7	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGATG.................................................................................................................	20	8	1.88	15	4	2	0	0	0	0	9	0	0	0	0
......................................................................................................CAAG------------------------------AACCGTGAGAAATGACGTC-------------ATTG......................................................................................................................	27	8	1.88	15	0	9	0	0	1	4	1	0	0	0	0
...........................................................................CAGATTTTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	28	7	1.86	13	8	0	0	0	0	0	5	0	0	0	0
..............................................................................................................................................................................................................................TACCCGATACGGCGTTGGATAAATG...........................................	25	8	1.75	14	0	1	2	0	0	0	0	0	0	0	11
.............................................................................................................................................................................................................................................TGGATAAATGACTTTGAGCAT................................	21	8	1.75	14	0	4	0	0	0	0	10	0	0	0	0
..............................................................................................................................................................................................CCTTGATTAATTGTTTTTCGGGAGA...........................................................................	25	8	1.63	13	0	1	0	0	0	1	0	0	0	0	11
...............................................................................TTTTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	24	8	1.63	13	2	0	0	0	0	0	1	0	0	0	10
...................................................................................................................................................................................................................GAGATGATGGCTACCCGATACGGCGT.....................................................	26	8	1.50	12	0	2	0	0	0	1	9	0	0	0	0
.............................................................TGCTGAACTGGAAGCAGATTTTAAGT...........................................................................................................................................................................................................	26	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3
..............................TGGAAAACTTGTACCTA...................................................................................................................................................................................................................................................	17	9	1.44	13	0	0	0	0	0	0	0	0	0	0	13
........................................................................................................AG------------------------------AACCGTGAGAAATGACGTC-------------ATTG......................................................................................................................	25	8	1.38	11	3	6	0	0	2	0	0	0	0	0	0
..............................................................................................................................................................................................................................TACCCGATACGGCGTTGGATAAATGAC.........................................	27	8	1.38	11	0	0	10	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................................................TGATGGCTACCCGATACGGCGTTGGA.................................................	26	8	1.38	11	0	3	4	2	0	0	2	0	0	0	0
.....................................................................................................................................................................................ACATAGAAGCCTTGATTAATTGTTT....................................................................................	25	8	1.25	10	0	0	0	0	0	0	0	0	0	0	10
........................................................................................................................................................................................................................GATGGCTACCCGATACGGCGTTG...................................................	23	8	1.25	10	0	1	0	0	0	0	9	0	0	0	0
.......................................................................................................................................................................................ATAGAAGCCTTGATTAATTGT......................................................................................	21	8	1.25	10	0	0	0	0	0	1	9	0	0	0	0
...........................................................................CAGATTTTAAGTTAATGGAAGGAGG..............................................................................................................................................................................................	25	7	1.14	8	1	4	0	0	0	2	1	0	0	0	0
.................................................................................................................................................AAATGACGTC-------------ATTGGGATGAAA..............................................................................................................	22	8	1.13	9	5	1	0	0	1	1	1	0	0	0	0
.......................................................................................................AAG------------------------------AACCGTGAGAAATGACGTC-------------ATTG......................................................................................................................	26	8	1.13	9	6	2	0	0	0	1	0	0	0	0	0
...................TTTAAACAACTTGGAAAACTTGTACC.....................................................................................................................................................................................................................................................	26	9	1.11	10	0	1	9	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................GGATAAATGACTTTGAGCAT................................	20	8	1.00	8	0	5	0	0	0	1	2	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGATGAA...............................................................................................................	22	8	1.00	8	6	1	1	0	0	0	0	0	0	0	0
.............................................TAGCTCGTAGGCGTGTTGCTGA...............................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
................................................CTCGTAGGCGTGTTGCTGAACTGG..........................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
..............................................AGCTCGTAGGCGTGTTGCT.................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................ACCTAGCTCGTAGGCGTGTTGCTGAACTG...........................................................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................AGGCGTGTTGCTGAACTGGAAGCAGAT..................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................CTTGTACCTAGCTCGTAGGC.........................................................................................................................................................................................................................................	20	2	1.00	2	0	0	0	0	0	1	1	0	0	0	0
..................................................CGTAGGCGTGTTGCTGAACTGGAAGC......................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................GCCTTGATTAATTGTTTTTCGGGAGA...........................................................................	26	8	1.00	8	0	0	0	0	0	0	0	0	0	0	8
............................................CTAGCTCGTAGGCGTGTTGCTGAACTG...........................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................GCAAG------------------------------AACCGTGAGAAATGACGT........................................................................................................................................	23	8	1.00	8	0	1	0	0	0	0	7	0	0	0	0
...............................................GCTCGTAGGCGTGTTGCTGAAC.............................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.................................................TCGTAGGCGTGTTGCTGAACTGG..........................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................TTGTACCTAGCTCGTAGGCGTG......................................................................................................................................................................................................................................	22	2	1.00	2	0	0	0	0	0	2	0	0	0	0	0
.........................................TACCTAGCTCGTAGGCGTGTTGCT.................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................ATTTTAAGTTAATGGAAGGAGG..............................................................................................................................................................................................	22	8	1.00	8	0	2	0	0	0	0	6	0	0	0	0
....................................ACTTGTACCTAGCTCGTAGGCGTGTTG...................................................................................................................................................................................................................................	27	2	1.00	2	0	0	0	0	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................TATAATGAACACGTATGACGTACCAGA......	27	8	1.00	8	0	2	0	0	0	0	0	0	0	0	6
............................................CTAGCTCGTAGGCGTGTTGCTGAAC.............................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TGGCTACCCGATACGGCGTTGGAT................................................	24	8	1.00	8	2	0	0	0	0	0	0	0	0	0	6
.............................................TAGCTCGTAGGCGTGTTGCTGAACT............................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................TGTACCTAGCTCGTAGGCGTGTTGCTGAA..............................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..............................................AGCTCGTAGGCGTGTTGCTGAAC.............................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.....................................CTTGTACCTAGCTCGTAGGCG........................................................................................................................................................................................................................................	21	2	1.00	2	2	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGATGAAAGAC...........................................................................................................	26	8	1.00	8	1	1	0	0	0	0	6	0	0	0	0
....................................................TAGGCGTGTTGCTGAACTGGAAGC......................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................................GAGAAATGACGTC-------------ATTGGG....................................................................................................................	19	8	0.88	7	0	0	0	0	0	0	7	0	0	0	0
.....................................................................................GTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	18	8	0.88	7	2	2	1	0	0	0	2	0	0	0	0
.............................................................................................................................................................................................GCCTTGATTAATTGTTTTTCGGGA.............................................................................	24	8	0.88	7	0	0	0	0	0	0	0	0	0	0	7
..................................................................................................................................................AATGACGTC-------------ATTGGGATGA................................................................................................................	19	8	0.88	7	2	0	0	0	0	0	5	0	0	0	0
..............................................................................................................................................GAGAAATGACGTC-------------ATTGGGATGAAA..............................................................................................................	25	8	0.88	7	0	1	1	0	0	0	5	0	0	0	0
......................................................................................................CAAG------------------------------AACCGTGAGAAATGACGTC-------------ATT.......................................................................................................................	26	8	0.88	7	0	2	0	0	0	0	5	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGATGA................................................................................................................	21	8	0.88	7	1	1	0	0	0	0	5	0	0	0	0
....................................................................................AGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	19	8	0.88	7	1	2	0	0	0	1	3	0	0	0	0
.......................................................................................................AAG------------------------------AACCGTGAGAAATGACGTC-------------ATT.......................................................................................................................	25	8	0.88	7	1	0	1	0	1	1	3	0	0	0	0
..........................................................................GCAGATTTTAAGTTAATGGAAGGAGG..............................................................................................................................................................................................	26	7	0.86	6	0	1	0	0	0	1	4	0	0	0	0
........................................................................................................................................AACCGTGAGAAATGACGTC-------------ATTGGGATG.................................................................................................................	28	8	0.75	6	6	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TGATGGCTACCCGATACGGCGTTGG..................................................	25	8	0.75	6	0	2	1	2	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................GTTGGATAAATGACTTTGAGCATATAAT...........................	28	8	0.75	6	0	0	1	0	0	0	5	0	0	0	0
................................................................................................GAGGAGCAAG------------------------------AACCGTGAGAAATGACG.........................................................................................................................................	27	8	0.75	6	5	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GACATAGAAGCCTTGATTAATT........................................................................................	22	8	0.75	6	0	3	1	0	0	0	2	0	0	0	0
..............................................................................ATTTTAAGTTAATGGAAGGAGGAG............................................................................................................................................................................................	24	8	0.75	6	0	2	0	0	0	2	2	0	0	0	0
........................................................................................................AG------------------------------AACCGTGAGAAATGACGTC-------------ATT.......................................................................................................................	24	8	0.75	6	0	3	0	0	1	0	2	0	0	0	0
......................................................................................................................................................................................................................ATGATGGCTACCCGATACGGCGTTG...................................................	25	8	0.75	6	0	2	0	0	1	0	3	0	0	0	0
.......................................................................................................................................................CGTC-------------ATTGGGATGAAAGACATAGAAGC...................................................................................................	27	8	0.75	6	6	0	0	0	0	0	0	0	0	0	0
.......................................................................................................AAG------------------------------AACCGTGAGAAATGACGTC-------------ATTGG.....................................................................................................................	27	8	0.75	6	3	1	0	0	0	0	2	0	0	0	0
..............................................................................................................................................GAGAAATGACGTC-------------ATTGGGATGAAAGAC...........................................................................................................	28	8	0.75	6	0	0	0	0	0	0	6	0	0	0	0
......................................................................................................................................................................................................................ATGATGGCTACCCGATACGGCGT.....................................................	23	8	0.75	6	0	0	1	0	0	0	5	0	0	0	0
.......................................................................................................................................................................................ATAGAAGCCTTGATTAATTGTT.....................................................................................	22	8	0.75	6	0	1	0	0	0	0	5	0	0	0	0
................................................................................................GAGGAGCAAG------------------------------AACCGTGAGAAA..............................................................................................................................................	22	8	0.75	6	6	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GTTGGATAAATGACTTTGAGC..................................	21	8	0.75	6	0	0	0	0	0	0	6	0	0	0	0
..............................................................................ATTTTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	25	8	0.75	6	6	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TGATGGCTACCCGATACGGCGT.....................................................	22	8	0.75	6	0	2	1	0	0	0	3	0	0	0	0
.............................................................................................................................................TGAGAAATGACGTC-------------ATTGGGATGAAA..............................................................................................................	26	8	0.75	6	0	2	3	0	0	0	1	0	0	0	0
..........................................................................GCAGATTTTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	29	7	0.71	5	5	0	0	0	0	0	0	0	0	0	0
.........................................................................AGCAGATTTTAAGTTAATGGAAGGAGG..............................................................................................................................................................................................	27	7	0.71	5	0	2	0	0	0	0	3	0	0	0	0
..................................................................................................................................................................................................................................................................ATAATGAACACGTATGACGT............	20	8	0.63	5	0	2	0	0	0	0	3	0	0	0	0
.................................................................................TTAAGTTAATGGAAGGAGGA.............................................................................................................................................................................................	20	8	0.63	5	0	0	0	0	0	0	5	0	0	0	0
.....................................................................................................................................................................................................................GATGATGGCTACCCGATACGGCGTTGG..................................................	27	8	0.63	5	0	1	0	0	0	0	4	0	0	0	0
........................................................................................AATGGAAGGAGGAGCAAG------------------------------AACCGTGA..................................................................................................................................................	26	8	0.63	5	0	2	0	0	0	0	3	0	0	0	0
.....................................................................................GTTAATGGAAGGAGGAGCAA.........................................................................................................................................................................................	20	8	0.63	5	0	0	0	0	0	0	5	0	0	0	0
................................................................................TTTAAGTTAATGGAAGGAGG..............................................................................................................................................................................................	20	8	0.63	5	0	0	0	0	0	0	5	0	0	0	0
.........................................................................................................................................................................................................................................................TTTGAGCATATAATGAACACGTA..................	23	8	0.63	5	0	5	0	0	0	0	0	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGATGAAAGACATA........................................................................................................	29	8	0.63	5	4	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................TTTGAGCATATAATGAACACGTAT.................	24	8	0.63	5	0	5	0	0	0	0	0	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGATGAAAGA............................................................................................................	25	8	0.63	5	1	1	1	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................................................GATGATGGCTACCCGATACGGCGTT....................................................	25	8	0.63	5	0	0	0	0	0	0	5	0	0	0	0
..............................................................................................................................................GAGAAATGACGTC-------------ATTGGGATGA................................................................................................................	23	8	0.63	5	0	0	0	0	0	0	5	0	0	0	0
..........................................................................................................................................................................................................................TGGCTACCCGATACGGCGTTG...................................................	21	8	0.63	5	0	1	0	0	2	2	0	0	0	0	0
..................................................................................................................................................AATGACGTC-------------ATTGGGATGAAA..............................................................................................................	21	8	0.63	5	0	3	0	0	0	0	2	0	0	0	0
....................................................................................................AGCAAG------------------------------AACCGTGAGAAATGACGTC-------------ATT.......................................................................................................................	28	8	0.63	5	0	1	0	0	0	0	4	0	0	0	0
............................................................................................................................................................................................................................................TTGGATAAATGACTTTGAGC..................................	20	8	0.63	5	2	1	0	0	0	0	2	0	0	0	0
........................................................................................................................................................................................................................GATGGCTACCCGATACGGCGTTGG..................................................	24	8	0.63	5	0	1	0	1	0	1	2	0	0	0	0
............................................................................................................................................GTGAGAAATGACGTC-------------ATTGGGATGAAA..............................................................................................................	27	8	0.63	5	0	0	0	0	0	0	2	0	0	0	3
..............................................................................................................................................................................................................................................GGATAAATGACTTTGAGCATATAAT...........................	25	8	0.63	5	0	3	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................................................................................GATAAATGACTTTGAGCAT................................	19	8	0.63	5	0	3	0	0	0	0	2	0	0	0	0
....................................................................CTGGAAGCAGATTTTAAGTTAATGGAAG..................................................................................................................................................................................................	28	7	0.57	4	0	0	0	0	0	0	4	0	0	0	0
...........................................................................CAGATTTTAAGTTAATGGAAGGAG...............................................................................................................................................................................................	24	7	0.57	4	0	1	0	0	0	0	3	0	0	0	0
.............................................................................GATTTTAAGTTAATGGAAGGAGGAG............................................................................................................................................................................................	25	7	0.57	4	0	1	0	0	0	1	2	0	0	0	0
......TAGAGATGCAGCATTTAAACAACTTG..................................................................................................................................................................................................................................................................	26	9	0.56	5	0	5	0	0	0	0	0	0	0	0	0
.........................CAACTTGGAAAACTTGTACCTAGCTCG..............................................................................................................................................................................................................................................	27	9	0.56	5	0	5	0	0	0	0	0	0	0	0	0
......TAGAGATGCAGCATTTAAACA.......................................................................................................................................................................................................................................................................	21	9	0.56	5	0	2	0	0	0	0	3	0	0	0	0
.........................................................................................................................................................................TTGGGATGAAAGACATAGAAGC...................................................................................................	22	8	0.50	4	3	0	1	0	0	0	0	0	0	0	0
.....................................................................................................GCAAG------------------------------AACCGTGAGAAATGACGTC-------------ATTG......................................................................................................................	28	8	0.50	4	2	0	0	0	0	1	1	0	0	0	0
.....................................................................................GTTAATGGAAGGAGGAGCAAG------------------------------AACC......................................................................................................................................................	25	8	0.50	4	0	0	1	0	0	0	3	0	0	0	0
...............................................................................................................................................AGAAATGACGTC-------------ATTGGGATGAA...............................................................................................................	23	8	0.50	4	4	0	0	0	0	0	0	0	0	0	0
..............................TGGAAAACTTGTACCTAGCTCGTAGGCG........................................................................................................................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
......................................TTGTACCTAGCTCGTAGGCGTGTTG...................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................TAATTGTTTTTCGGGAGATGATGGC....................................................................	25	8	0.50	4	0	0	3	1	0	0	0	0	0	0	0
....................................................................................................AGCAAG------------------------------AACCGTGAGAAATGACGTC-------------..........................................................................................................................	25	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
........................................GTACCTAGCTCGTAGGCGTG......................................................................................................................................................................................................................................	20	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGAT..................................................................................................................	19	8	0.50	4	0	0	0	0	1	0	3	0	0	0	0
....................................................................................AGTTAATGGAAGGAGGAGCAA.........................................................................................................................................................................................	21	8	0.50	4	0	1	0	0	0	3	0	0	0	0	0
..........................................................................................................................................................................................................................TGGCTACCCGATACGGCGTTGG..................................................	22	8	0.50	4	0	1	0	0	0	3	0	0	0	0	0
.....................................................................................................................................................................................................................GATGATGGCTACCCGATACGGCGTTG...................................................	26	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
.....................................CTTGTACCTAGCTCGTAGG..........................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0
.....................................CTTGTACCTAGCTCGTAG...........................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................................GAGAAATGACGTC-------------ATTGGGAT..................................................................................................................	21	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
..........................................................................................................................................................................................................GTTTTTCGGGAGATGATGGC....................................................................	20	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
...............................................................CTGAACTGGAAGCAGATTTTAAGTT..........................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................GTTGGATAAATGACTTTGAGCATAT..............................	25	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
.................................................................GAACTGGAAGCAGATTTTA..............................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
....................................ACTTGTACCTAGCTCGTAGGCG........................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0
....................................ACTTGTACCTAGCTCGTAGGCGT.......................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................AAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	20	8	0.50	4	1	1	0	0	0	1	1	0	0	0	0
......................................................................................................................................................................................................................ATGATGGCTACCCGATACGGCGTTGG..................................................	26	8	0.50	4	0	1	0	0	1	0	2	0	0	0	0
................................................................TGAACTGGAAGCAGATTTTAAGTT..........................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.........................................TACCTAGCTCGTAGGCGTGTTT...................................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................TACCCGATACGGCGTTGGATAAATGACT........................................	28	8	0.50	4	0	1	3	0	0	0	0	0	0	0	0
CACAGTTAGAGATGCAGC................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0
...................................AACTTGTACCTAGCTCGTAGGCG........................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0
...........................................................GTTGCTGAACTGGAAGCAGATTTTAAGT...........................................................................................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................TGCTGAACTGGAAGCAGA...................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	1	0	0	0	0	0
....................................................................................................AGCAAG------------------------------AACCGTGAGAAATGACGTC-------------A.........................................................................................................................	26	8	0.50	4	0	0	0	0	1	3	0	0	0	0	0
.............................................................................................................................................................................................GCCTTGATTAATTGTTTTTCGG...............................................................................	22	8	0.50	4	0	3	1	0	0	0	0	0	0	0	0
..................................................................AACTGGAAGCAGATTTTAA.............................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................AAATGACGTC-------------ATTGGGATGAA...............................................................................................................	21	8	0.50	4	4	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................AACCGTGAGAAATGACGTC-------------ATTGGGA...................................................................................................................	26	8	0.50	4	0	0	0	0	0	0	0	0	0	0	4
.....................................CTTGTACCTAGCTCGTAGGCGTGT.....................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GTTGGATAAATGACTTTGAGCA.................................	22	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
....................................................................................................................................................................................................................................................................AATGAACACGTATGACGTACC.........	21	8	0.50	4	0	1	1	0	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................GACTTTGAGCATATAATGAACACGT...................	25	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
.........................................................................................................................................ACCGTGAGAAATGACGTC-------------ATTGGGA...................................................................................................................	25	8	0.50	4	0	3	0	0	0	0	0	0	0	0	1
..................................................................................................................................................AATGACGTC-------------ATTGGGATG.................................................................................................................	18	8	0.50	4	2	1	0	0	0	0	1	0	0	0	0
...................................AACTTGTACCTAGCTCGTAGGCGTGTTT...................................................................................................................................................................................................................................	28	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0
CACAGTTAGAGATGCAGCATTTAAAC........................................................................................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................ACTGGAAGCAGATTTTAAGT...........................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................GGCGTTGGATAAATGACTTTGAGCAT................................	26	8	0.50	4	0	0	0	0	0	0	0	0	0	0	4
...............................................................................................................................................AGAAATGACGTC-------------ATTGGGATG.................................................................................................................	21	8	0.50	4	4	0	0	0	0	0	0	0	0	0	0
..........................................................TGTTGCTGAACTGGAAGCAGATTTTAA.............................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1
.........................................................................................................................................ACCGTGAGAAATGACGTC-------------ATTGGGATG.................................................................................................................	27	8	0.50	4	3	0	0	0	0	0	1	0	0	0	0
..........................................ACCTAGCTCGTAGGCGTGTT....................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................GTTGCTGAACTGGAAGCAGATTTTAAGTT..........................................................................................................................................................................................................	29	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................CATAGAAGCCTTGATTAATT........................................................................................	20	8	0.50	4	0	0	0	0	0	0	4	0	0	0	0
....GTTAGAGATGCAGCATTTAAACAACTTGGAA...............................................................................................................................................................................................................................................................	31	9	0.44	4	0	0	0	0	0	0	0	0	0	0	4
...........................ACTTGGAAAACTTGTACCTAGCTC...............................................................................................................................................................................................................................................	24	9	0.44	4	0	3	1	0	0	0	0	0	0	0	0
.........................CAACTTGGAAAACTTGTACCTAGCT................................................................................................................................................................................................................................................	25	9	0.44	4	0	2	2	0	0	0	0	0	0	0	0
.............................................................................GATTTTAAGTTAATGGAAGGAG...............................................................................................................................................................................................	22	7	0.43	3	0	0	0	0	0	0	3	0	0	0	0
.............................................................................GATTTTAAGTTAATGGAAGGAGGAGCA..........................................................................................................................................................................................	27	7	0.43	3	1	0	0	0	0	0	2	0	0	0	0
......................................................................GGAAGCAGATTTTAAGTTAATGGAAG..................................................................................................................................................................................................	26	7	0.43	3	0	0	0	0	0	0	0	0	0	0	3
............................................................................AGATTTTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	27	7	0.43	3	2	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................ATAAATGACTTTGAGCAT................................	18	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................GACGTC-------------ATTGGGATGAAAGACATAGAAGC...................................................................................................	29	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................GAAATGACGTC-------------ATTGGGATGAAAG.............................................................................................................	24	8	0.38	3	2	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................AGAAATGACGTC-------------ATTGGGATGAAA..............................................................................................................	24	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TGGCTACCCGATACGGCGTTGGATA...............................................	25	8	0.38	3	0	0	2	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GACTTTGAGCATATAATGAACAC.....................	23	8	0.38	3	0	2	0	0	0	0	1	0	0	0	0
.........................................................................................................G------------------------------AACCGTGAGAAATGACGTC-------------ATT.......................................................................................................................	23	8	0.38	3	0	2	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................GACGTC-------------ATTGGGATGAAAGACATAGA......................................................................................................	26	8	0.38	3	0	0	0	0	0	0	1	0	0	0	2
...........................................................................................................................................................................................................................GGCTACCCGATACGGCGTTG...................................................	20	8	0.38	3	0	1	0	0	0	0	2	0	0	0	0
.................................................................................................................................................................................................................................................................TATAATGAACACGTATGACGTACC.........	24	8	0.38	3	0	0	3	0	0	0	0	0	0	0	0
....................................................................................................AGCAAG------------------------------AACCGTGAGAAATGACGT........................................................................................................................................	24	8	0.38	3	0	1	0	0	0	0	2	0	0	0	0
.................................................................................................AGGAGCAAG------------------------------AACCGTGAGA................................................................................................................................................	19	8	0.38	3	0	0	0	0	0	1	2	0	0	0	0
..................................................................................TAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	21	8	0.38	3	1	0	0	0	0	0	2	0	0	0	0
.........................................................................................................................................................TC-------------ATTGGGATGAAAGACATAGAAGC...................................................................................................	25	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................TTGGATAAATGACTTTGAGCAT................................	22	8	0.38	3	1	0	0	0	0	0	2	0	0	0	0
.....................................................................................................GCAAG------------------------------AACCGTGAGAAATGACGTC-------------..........................................................................................................................	24	8	0.38	3	0	0	0	0	0	0	3	0	0	0	0
..............................................................................................................................................GAGAAATGACGTC-------------ATTGGGA...................................................................................................................	20	8	0.38	3	0	0	0	0	0	0	3	0	0	0	0
................................................................................................GAGGAGCAAG------------------------------AACCGTGAGA................................................................................................................................................	20	8	0.38	3	2	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................TGACGTC-------------ATTGGGATGAAAGACATAGA......................................................................................................	27	8	0.38	3	0	0	0	1	0	1	1	0	0	0	0
..........................................................................................................................................................C-------------ATTGGGATGAAAGACATAGAAGCCT.................................................................................................	26	8	0.38	3	0	1	1	0	0	0	1	0	0	0	0
.........................................................................................................................................................................TTGGGATGAAAGACATAGAAGCCT.................................................................................................	24	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................GTGAGAAATGACGTC-------------ATTGGGAT..................................................................................................................	23	8	0.38	3	0	0	1	0	0	0	2	0	0	0	0
.................................................................................................................................................................................AAAGACATAGAAGCCTTGATTAATTGTT.....................................................................................	28	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................CCGTGAGAAATGACGTC-------------ATTGGGATG.................................................................................................................	26	8	0.38	3	0	0	0	0	2	0	1	0	0	0	0
..............................................................................................................................................GAGAAATGACGTC-------------ATTGGGATGAAAGA............................................................................................................	27	8	0.38	3	0	1	0	0	0	0	2	0	0	0	0
......................................................................................................................................................................................CATAGAAGCCTTGATTAATTGT......................................................................................	22	8	0.38	3	0	0	0	0	0	0	3	0	0	0	0
........................................................................................................................................................................................................................GATGGCTACCCGATACGGC.......................................................	19	8	0.38	3	0	3	0	0	0	0	0	0	0	0	0
................................................................................................GAGGAGCAAG------------------------------AACCGTGAGAAATGAC..........................................................................................................................................	26	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
....................................................................................AGTTAATGGAAGGAGGAGCAAG------------------------------..........................................................................................................................................................	22	8	0.38	3	0	1	0	0	0	1	1	0	0	0	0
.................................................................................................................................................AAATGACGTC-------------ATTGGGATG.................................................................................................................	19	8	0.38	3	3	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................ATTGGGATGAAAGACATAGAAGC...................................................................................................	23	8	0.38	3	1	0	0	0	0	0	2	0	0	0	0
...........................................................................................................................................................................................................................GGCTACCCGATACGGCGTTGGAT................................................	23	8	0.38	3	0	0	0	0	0	0	0	0	0	0	3
..............................................................................................................................................................................................................................TACCCGATACGGCGTTGGATAAATGA..........................................	26	8	0.38	3	1	1	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TGATGGCTACCCGATACGGCG......................................................	21	8	0.38	3	0	1	0	0	0	0	0	0	0	0	2
.............................................................................................................................................................................................................................................................AGCATATAATGAACACGTAT.................	20	8	0.38	3	0	1	0	0	0	0	2	0	0	0	0
.............................................................................................................................................................................................................................CTACCCGATACGGCGTTGGATAAATG...........................................	26	8	0.38	3	2	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................GGCTACCCGATACGGCGTTGGATA...............................................	24	8	0.38	3	0	3	0	0	0	0	0	0	0	0	0
....GTTAGAGATGCAGCATTTAAAC........................................................................................................................................................................................................................................................................	22	9	0.33	3	0	0	0	0	0	0	3	0	0	0	0
....................TTAAACAACTTGGAAAACTT..........................................................................................................................................................................................................................................................	20	9	0.33	3	0	1	0	0	0	0	2	0	0	0	0
....................TTAAACAACTTGGAAAACTTGTACC.....................................................................................................................................................................................................................................................	25	9	0.33	3	0	0	3	0	0	0	0	0	0	0	0
...AGTTAGAGATGCAGCATTT............................................................................................................................................................................................................................................................................	19	9	0.33	3	0	1	0	0	0	0	2	0	0	0	0
..........GATGCAGCATTTAAACAACTTGGAAA..............................................................................................................................................................................................................................................................	26	9	0.33	3	0	0	0	0	0	0	1	0	0	0	2
............TGCAGCATTTAAACAACTTGGAAAACT...........................................................................................................................................................................................................................................................	27	9	0.33	3	0	0	1	0	0	0	0	0	0	0	2
.........................CAACTTGGAAAACTTGTACCTAGCTC...............................................................................................................................................................................................................................................	26	9	0.33	3	0	3	0	0	0	0	0	0	0	0	0
..........GATGCAGCATTTAAACAACTTGGA................................................................................................................................................................................................................................................................	24	9	0.33	3	0	3	0	0	0	0	0	0	0	0	0
......................AAACAACTTGGAAAACTTGTACC.....................................................................................................................................................................................................................................................	23	9	0.33	3	0	2	1	0	0	0	0	0	0	0	0
...........................ACTTGGAAAACTTGTACCTAGCT................................................................................................................................................................................................................................................	23	9	0.33	3	0	0	0	0	0	0	3	0	0	0	0
........................................................................AAGCAGATTTTAAGTTAATGGAAGGA................................................................................................................................................................................................	26	7	0.29	2	0	0	0	0	0	0	2	0	0	0	0
...........................................................................CAGATTTTAAGTTAATGGAAGGA................................................................................................................................................................................................	23	7	0.29	2	0	1	0	0	0	0	1	0	0	0	0
....................................................................CTGGAAGCAGATTTTAAGTTAATGGAA...................................................................................................................................................................................................	27	7	0.29	2	0	1	0	0	0	0	1	0	0	0	0
....................................................................CTGGAAGCAGATTTTAAGTTAATGG.....................................................................................................................................................................................................	25	7	0.29	2	0	1	0	0	0	0	1	0	0	0	0
.........................................................................AGCAGATTTTAAGTTAATGGAAGG.................................................................................................................................................................................................	24	7	0.29	2	0	0	0	0	0	0	2	0	0	0	0
............................................................................AGATTTTAAGTTAATGGAAGGAGGAG............................................................................................................................................................................................	26	7	0.29	2	0	0	0	0	0	2	0	0	0	0	0
.............................................................................GATTTTAAGTTAATGGAAGGA................................................................................................................................................................................................	21	7	0.29	2	0	0	0	0	0	0	2	0	0	0	0
.......................................................................GAAGCAGATTTTAAGTTAATGGAAGGA................................................................................................................................................................................................	27	7	0.29	2	0	1	0	0	0	0	1	0	0	0	0
.......................................................................GAAGCAGATTTTAAGTTAATGGAAGGAG...............................................................................................................................................................................................	28	7	0.29	2	0	0	0	0	0	0	2	0	0	0	0
............................................................................AGATTTTAAGTTAATGGAAGGA................................................................................................................................................................................................	22	7	0.29	2	0	0	0	0	0	0	2	0	0	0	0
............................................................................AGATTTTAAGTTAATGGAAGGAG...............................................................................................................................................................................................	23	7	0.29	2	0	1	0	0	0	0	1	0	0	0	0
.............................................................................................................................................TGAGAAATGACGTC-------------ATTGGGATGAAAGA............................................................................................................	28	8	0.25	2	0	0	2	0	0	0	0	0	0	0	0
........................................................................................................AG------------------------------AACCGTGAGAAATGACGTC-------------AT........................................................................................................................	23	8	0.25	2	0	1	0	0	0	1	0	0	0	0	0
................................................................................................................................................................................................................CGGGAGATGATGGCTACCCGATACGGCGT.....................................................	29	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
............................................................................................................................................................................................................................................TTGGATAAATGACTTTGAGCATAT..............................	24	8	0.25	2	1	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................................................................................................GAGCATATAATGAACACGTATGACG.............	25	8	0.25	2	0	2	0	0	0	0	0	0	0	0	0
...................................................................................................GAGCAAG------------------------------AACCGTGAGAAATGACGTC-------------ATT.......................................................................................................................	29	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................................................TCGGGAGATGATGGCTACCCGATACGGCGT.....................................................	30	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
.......................................................................................................................................................................................................................TGATGGCTACCCGATACGGCGTTGGAAT...............................................	28	8	0.25	2	0	0	0	0	0	0	0	0	0	0	2
.............................................................................................AAGGAGGAGCAAG------------------------------AACCGTGAGAAA..............................................................................................................................................	25	8	0.25	2	2	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCCTTGATTAATTGTTTTTCGGGAG............................................................................	25	8	0.25	2	0	0	0	0	0	0	0	0	0	0	2
.....................................................................................GTTAATGGAAGGAGGAGCAAG------------------------------..........................................................................................................................................................	21	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
..................................................................................................................................................AATGACGTC-------------ATTGGGATGAAAGAC...........................................................................................................	24	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
...................................................................................................................................................ATGACGTC-------------ATTGGGATGAAAGA............................................................................................................	22	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................ATAGAAGCCTTGATTAATT........................................................................................	19	8	0.25	2	0	1	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................GTTGGATAAATGACTTTGAGCATATA.............................	26	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
............................................................................................GAAGGAGGAGCAAG------------------------------AACCGTGAG.................................................................................................................................................	23	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
.......................................................................................................AAG------------------------------AACCGTGAGAAATGACGTC-------------AT........................................................................................................................	24	8	0.25	2	0	0	0	0	0	1	1	0	0	0	0
........................................................................................................AG------------------------------AACCGTGAGAAATGACGTC-------------ATTGG.....................................................................................................................	26	8	0.25	2	0	2	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AATTGTTTTTCGGGAGATG.........................................................................	19	8	0.25	2	0	1	1	0	0	0	0	0	0	0	0
......................................................................................................CAAG------------------------------AACCGTGAGAAATGAC..........................................................................................................................................	20	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................AAGACATAGAAGCCTTGATTAATTGT......................................................................................	26	8	0.25	2	1	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................AATGACGTC-------------ATTGGGATGAAAGACATAG.......................................................................................................	28	8	0.25	2	2	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................ATGAACACGTATGACGTACCA........	21	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................GACATAGAAGCCTTGATTAATTGT......................................................................................	24	8	0.25	2	0	0	0	0	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................GTTGGATAAATGACTTTGAGCATATAATG..........................	29	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
........................................................................................................................................................GTC-------------ATTGGGATGAAAGACATAGAAGCC..................................................................................................	27	8	0.25	2	0	0	1	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................AATTGTTTTTCGGGAGATGATGGCTACCC...............................................................	29	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
.................................................................................TTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	22	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................ATTGGGATGAAAGACATAGAAGCC..................................................................................................	24	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
........................................................................................AATGGAAGGAGGAGCAAG------------------------------A.........................................................................................................................................................	19	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................C-------------ATTGGGATGAAAGACATAGAAGCCTT................................................................................................	27	8	0.25	2	0	0	0	0	0	0	2	0	0	0	0
.............................................................................................................................................................................GATGAAAGACATAGAAGCCT.................................................................................................	20	8	0.25	2	2	0	0	0	0	0	0	0	0	0	0
....................................................................................AGTTAATGGAAGGAGGAG............................................................................................................................................................................................	18	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
..................................................................................................................................................AATGACGTC-------------ATTGGGATGAAAGACATAGA......................................................................................................	29	8	0.25	2	2	0	0	0	0	0	0	0	0	0	0
................................................................................TTTAAGTTAATGGAAGGAGGAGC...........................................................................................................................................................................................	23	8	0.25	2	0	0	1	0	0	0	1	0	0	0	0
...................................................................................AAGTTAATGGAAGGAGGAG............................................................................................................................................................................................	19	8	0.25	2	0	0	0	0	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................TGATGGCTACCCGATACGGCGTTGGATA...............................................	28	8	0.25	2	0	0	1	0	0	0	1	0	0	0	0
........................................................................................AATGGAAGGAGGAGCAAG------------------------------AACCGT....................................................................................................................................................	24	8	0.25	2	0	1	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................CTTTGAGCATATAATGAACA......................	20	8	0.25	2	0	2	0	0	0	0	0	0	0	0	0
.......................................................................................TAATGGAAGGAGGAGCAA.........................................................................................................................................................................................	18	8	0.25	2	0	1	0	0	0	1	0	0	0	0	0
....................................................................................................................................................TGACGTC-------------ATTGGGATGAAAGAC...........................................................................................................	22	8	0.25	2	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................AACCGTGAGAAATGACGTC-------------ATTG......................................................................................................................	23	8	0.25	2	0	0	0	0	0	1	1	0	0	0	0

droEre2

G-----CAGAAATACAATATCTACAGGAAGTTGAGAGGCTGTACGCTGCGCGCAAACGAGTGGCTGATTTAGAAAATGAGTTG-----------------------GGACAAAATAA-------------------ATCAGCTCAAGAAGACAAC-------------ATCTATATGAGTGATTTGGATGCCCTAATTCAATCGTTTTCTAGAGACAATGGATACCCTGTGCTGCGTTGGATCGACGACTTTTCGAATATAATGGATATATATTGCGTGCCGGAGAAAAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
....................................................................................................................................................................................................................................GTGCTGCGTTGGATCGAC............................................	18	4	0.25	1	1	0	0	0	0	0	0
...............................................................................................................................................CAAGAAGACAAC-------------ATCTATATGAGTG.............................................................................................................	25	4	0.25	1	1	0	0	0	0	0	0

dvi_12731

scaffold_12970:675966-676116 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads