ID:

dvi_12673

 Coordinate:

scaffold_12963:20175220-20175370 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1 -5.4 -5.3

Flybase annnotation

CDS [Dvir\GJ17830-cds]; exon [dvir_GLEANR_2393:2]; intron [Dvir\GJ17830-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_1175:61-81 +
  2. scaffold_12726:741698-741718 +
  3. scaffold_12726:2475070-2475090 +
  4. scaffold_12822:2224197-2224217 +
  5. scaffold_12855:3307660-3307680 +
  6. scaffold_12875:7061671-7061691 +
  7. scaffold_12875:12526394-12526414 +
  8. scaffold_12875:14007961-14007981 +
  9. scaffold_12875:20381747-20381767 +
  10. scaffold_12928:1184318-1184338 +
  11. scaffold_12928:1962774-1962794 +
  12. scaffold_12932:1610238-1610258 +
  13. scaffold_12963:5426361-5426381 +
  14. scaffold_12963:15177777-15177797 +
  15. dvi_12673  scaffold_12963:20175349-20175369 +
  16. scaffold_13047:849681-849701 +
  17. scaffold_13047:3169742-3169762 +
  18. scaffold_13049:6063694-6063714 +
  19. scaffold_13049:12923457-12923477 +
  20. scaffold_13049:14927626-14927646 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTGTTTACCTTCGTGCGTTTGTTTACCTGTATTTTGATTTTGATTATTATTTTTTTTTAACTTACTCGTTTTGCCCCTGACATATGGTATATGTATTTGCGGGGATACCCGCTCGCTTTGTGATTTAATTTTTGGTATTAATGTTTTTCCTTATTTCTGGTTTTTCATTGCAGTGCCAACAGCAACAGCAACAGCAACAGCAGCAACTATGTCGAGTGCCAGCGTACACGCTCCCCAAATTGCCGACATT
****************************************************************************************************************************************************.........(((........((((.((....)).))))......))).....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 M061
embryo
 V116
male body		 SRR060665
9_females_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060688
160_ovaries_total
 SRR1106724
embryo_12-14h
 GSM1528803
follicle cells		 SRR060680
 9xArg_testes_total
 M027
male body		 SRR060664
9_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
............................................................................................................................................................................................................CAACTATGTCGAGTGCCAGC........................... 20 0 1 3.00 3 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........CCTTCGTGCGTTTGTTTACCT.............................................................................................................................................................................................................................. 21 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AACTATGTCGAGTGCCAGC........................... 19 0 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CAGCAACTATGTCGAGTGCCAGCGT......................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGAGTGCCAGCGTACACGC................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGTCGAGTGCCAGCGTACACGCTCC................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TCCTTATTTCTGGTTTTTCATTGCAG............................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GTCGAGTGCCAGCGTACA...................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTTTCCTTATTTCTGGTTTTTCATTGCAA............................................................................. 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CACGCTCCCCAAATTGCCGAC... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCAGCAACTATGTCGAGGGCC.............................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AGCAACTATGTCGAGTGCCAGC........................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GCAACAGCAGCAACTATGTCGAGTGCC.............................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGCAACAGCAGCAACTATGTCG.................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................TTACCTGTATTTTGATTTTGATTATTAT........................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ACCTTCGTGCGTTTGTTTACC............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGAGTGCCAGCGTACACGCTCCCCA............. 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCAACTATGTCGAGTGCCAGC........................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................CCCAAATTGCCGACATT 17 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................GTACACGCTCCCCAAATTGCC...... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CACGCTCCCCAAATTGCCGACC.. 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AACTATGTCGAGTGCCAGCGT......................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ACCGTACACGCTCCCCAAATTGCCGAC... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GCAGCAACTATGTCGAGTGCCAG............................ 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TAATGTTTTTCCTTATTTCTGGTTTT...................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGTATTTTGATTTTGAT.............................................................................................................................................................................................................. 17 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................CAACAGCAACAGCAACAGCAA..................................................... 21 0 20 0.30 6 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0
.......................................................................................................................................................................................................................AGTGCCGGAATACACGCTC................. 19 3 10 0.20 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0
.............................................................................................................................................................................TTGCCAACAGCAACAGCAACAGCAAC.................................................... 26 1 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AACAGCAACAGCAGCAACT.......................................... 19 0 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................GCAACAGCAACAGCAACAGCA................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................ACAGCAACAGCAACAGCAGCA............................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................ACAGCAACAGCAACAGCAACA................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CAACAGCAACAGCAACAGCA...................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................CAGCAACAGCAACAGCAACAG.................................................. 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

GAACAAATGGAAGCACGCAAACAAATGGACATAAAACTAAAACTAATAATAAAAAAAAATTGAATGAGCAAAACGGGGACTGTATACCATATACATAAACGCCCCTATGGGCGAGCGAAACACTAAATTAAAAACCATAATTACAAAAAGGAATAAAGACCAAAAAGTAACGTCACGGTTGTCGTTGTCGTTGTCGTTGTCGTCGTTGATACAGCTCACGGTCGCATGTGCGAGGGGTTTAACGGCTGTAA
***************************************************.........(((........((((.((....)).))))......))).....**************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060684
140x9_0-2h_embryos_total
 V116
male body		 M027
male body		 V053
head
 SRR060658
140_ovaries_total
.....................................................................................................................................................................................................................................ACGAGGGGTTTAACGGCT.... 18 1 1 1.00 1 1 0 0 0 0
........................................................................ACGGGGACTGTATACCATGT............................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................................................................CGCATGTGCGAGGGGTTTGAC........ 21 1 1 1.00 1 0 1 0 0 0
..................................................AAAAAAAAATTGAATGAGGCAA................................................................................................................................................................................... 22 2 3 0.33 1 1 0 0 0 0
.................................................................................................................................................................................................................................ATGTTCGAGTGGTTTGACGGC..... 21 3 4 0.25 1 0 0 0 1 0
....................................................AAAAAAATTGAATGAGGCAA................................................................................................................................................................................... 20 2 9 0.22 2 0 0 0 0 2
............................................................................................................................................TTACAGAGAGGAATAAAGAA........................................................................................... 20 3 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................GTCGTAGTTGATACTGCGC.................................. 19 3 20 0.05 1 0 0 0 1 0
.................................................................GAGGAAAAATGGGACTGTA....................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0
......................................................AAAAATTGAATGTGCCCAA.................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:20175170-20175420 + dvi_12673 CTTGTTTACCTTCGT--------------GCGTTTG---------------TTTACCTGT----------ATTTTGATTTTGATTATTATTTTTTTT-TAACTTACTCGTTTTGCCCCTGACATATGGTATATGTATTTGCGGGGATACCCGCTCGCT------T--------------------------------TGTG--ATT-----------------------------------------------------TA-A--TTTTTGGTAT--TA-AT------GTT-TTTCC--------T------TATTTCT-----------------------------GGTTTTTCATTGCAGTGCCAA---CA---GCAACAGCAACAGCAACAGCAGCAACTATGTCGAGTGCCAGCGTACACGCTCCCCAAATTGCCGAC---------ATT
droMoj3 scaffold_6473:8894268-8894466 - TGTAT--ATCTATAT--------------ATGTTTT---------------CTTTTCTGT-----------------ATT--CTTT------TTTTTTT------------------------------------------------------------------------------------------TGTTTTTTT-TTTTTTTTGTTAAATTACTGCGGTTTATTGTTTTATGCGCTCACAAACTTGTATCTATT-TAAA--TTTTGTGTATGGTA-A---C---ATG-TTTAT--------TTTA-------------------------------------------TAACCTTAAGGCAACAG---CA---ACA------G------------CAG----------CAGCAG----CGCAGCAGCCGAGTGAATGAC---------AGC
droGri2 scaffold_15252:5532685-5532905 - CTCGTTTACCTTCGT--------------GCGTTTG---------------TTTACCTGTGTATATTTT---------------TG----------TTG----TACTC----TGCCCCTGACATATG-----------------GATGCCCCCCCTATATAACCCCCCTTA---TACTGAACTTTTGTTAATTGTTGTGTTTTTTT-----------------------------------------------------TA-A---------------------CATTTTT-CTTAT--------T----------TCT-----------------------G-GTTT----TCCATTTGCAGTACCAA---CA---ACA------ACA---------GCAACAATGTCGAGTGCCAGCGTACATGCCCCCCAAATTGCCGAC---------ATT
droWil2 scf2_1100000004521:10688326-10688531 - GTATTTCAACTTTGGTAATTTTGCTAAACAAATTTT---------------A-------------TTTT---TATATATT--CATT------TTTTT--------------------------------------------------------------------------------------------CGTTTTTGTTTTTGTTTTTAATGGCGAC--------------------AAAAAAAGTCTGTCGGTGAGTTT---TATT---------------TATTTTTCT-TGCGT--------TTTT--------CGCTTTTCCAGCCAGCAGCAAGTGTGGGG---GCTTTCCACAGCAGCAGCAG---CA---GCAACAACAACA-------------------------------------------ACAACAACA-----------ACA
dp5 4_group3:9564782-9564981 - CCCGTTTACCTTCGG--------------GTGTGTGCTGTGTTCGGGGGTATTTACCTG--CAG-----AAT------------------------------------------------------------------------GACCCCCACTCGATCTCACCTTGTTACAATTGATGAACTTTGA---ATCGAATCGTG--TTT-----------------------------------------------------TA-A---------------------TTTTGCT-CTCCC--------TTC---------------------------------------T----TCCCATTGCAGTGCCAA---CA---GCA------GCA---------TCCAACATGTCTATTGCCAGTGTTCATGGTCCCCAGATCGCCGAC---------ATC
droPer2 scaffold_8:752207-752406 - CCCGTTTACCTTCGG--------------GTGTGTGCTGTGTTCGGGGGTATTTACCTG--CAG-----AAT------------------------------------------------------------------------GACCCCCACTCGATCTCACCTTGTTACAATTGATGAACTTTGA---ATCGAATCGTG--TTT-----------------------------------------------------TA-A---------------------TTTTGCT-CTCCC--------TTC---------------------------------------T----TCCCATTGCAGTGCCAA---CA---GCA------GCA---------TCCAACATGTCTATTGCCAGTGTTCATGGTCCCCAGATCGCCGAC---------ATC
droAna3 scaffold_12916:4583733-4583833 - TGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------TTTGG---------------------TTTCCCCATTTTCT-----------------------------TGTTTTTAATTGCAGTGCCAT---CA---ACA------GCA---------GCCAATATGTCGATCGCCAGCGTTCACGGTCCCCAAATCACCGAC---------ATC
droBip1 scf7180000396737:203574-203687 + GAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACTTTAA----CTGA-----T--T----------------------------------------------------------------------------TCGG---------------------TTTCCACCTTTTCT-----------------------------TGTTTTTAATTGCAGTGCCAT---CA---ACA------GCC---------ACCAATATGTCGATCGCCAGCGTTCACGGTCCCCAAATCGCCGAC---------ATC
droKik1 scf7180000302405:344287-344465 - CTCGTTCACCTTCGCCG------------GCGATCG---------------TTTACCTGGCCAG-----CAT------------------------------------------------------------------------TGAACCCGTGCTGCCGCTCGTCGTTACATTTGATGAACTCC-A----CTGA-----C--T---------------------------------------------------------------------------CTGTG-----CTTCTCTC--------CTC---------------------------------------T---TCCTCTTTGCAGTGCCAT---CA---GCA------GCA---------GCCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droFic1 scf7180000453901:95079-95238 - TTGTCTTTTTTCTTTCG------------A---T-------------------TTCTCGT----------TTTTTGTATTTTGTTGTTGTT--------------------------------------------------------------------------------------------------TTTTTTTGTTTTTTTCCTTCCAAATTAC--------------------ACAAACAAAATGGCGGCGGGTGC---TACT-------------------------------------------------TGT-----------------------GGGGTC----TCCGCACGCAGCAGCAACATCAACAGCAAAAGCAACA-------------------------------------------GCAACAGCA-----------ACA
droEle1 scf7180000491273:2371102-2371205 + TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTAA---ACTTAATTGTA--TAC-----------------------------------------------------CA-------------------------------------TTTT----CC---------------------------------------T----TCTCTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droRho1 scf7180000780238:6008-6130 + ACCCTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTGTAACTTGTGATGAACTTTAA----CTGA-----C--A---------------------------------------------------------------------------TTATG-----CT-TTCCC--------T----------------------------------------------CCTCTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droBia1 scf7180000302188:745654-745716 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droTak1 scf7180000415264:261734-261829 + ACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----C--G---------------------------------------------------------------------------TTTTT-----C------CGTTTTCCTCAAC-------------------------------------------TCTCTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droEug1 scf7180000409005:93240-93409 + CTCGTTTACCTTCGCCA------------GCGAGCG---------------TTTACCTGGCCAG-----TAT----------------------------------------------------------------------------------TGAACTCACCTTGTTACATTTGATGAACTTTAA----CTGA-----C--T---------------------------------------------------------------------------TTTTGTTTTCCT-TTCAT--------CTT---------------------------------------T----TCCTTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
dm3 chr2L:1117458-1117546 - TTCTTCTGCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG---------------------TTTC-------------------------------------------CCTCTTTGCAGTGCCAT---CA---GCA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droSim2 2l:1065119-1065204 - TTCTG---CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTG---------------------TTTC-------------------------------------------CCTCTTTGCAGTGCCAT---CA---GCA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droSec2 scaffold_14:1070737-1070825 - TTCTTCTGCCTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---------------------TTTC-------------------------------------------CCTCTTTGCAGTGCCAT---CA---GCA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droYak3 2L:1094958-1095037 - TTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------------T------TTTC-------------------------------------------CCTCTTTACAGTGCCAT---CA---GCA------G------------CCAACATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATC
droEre2 scaffold_4690:10974022-10974104 + CACCACCACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCAGCACCACCAA---CA---GCA------G------------CCGCAACAGCAATCGCCGGCGGCCACGA------ATGCGCCAATTTCCGTCTAATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTTGTTTACCTTCGT--------------GCGTTTG---------------TTTACCTGT----------ATTTTGATTTTGATTATTATTTTTTTT-TAACTTACTCGTTTTGCCCCTGACATATGGTATATGTATTTGCGGGGATACCCGCTCGCT------T--------------------------------TGTG--ATT-----------------------------------------------------TA-A--TTTTTGGTAT--TA-AT------GTT-TTTCC--------T------TATTTCT-----------------------------GGTTTTTCATTGCAGTGCCAA---CA---GCAACAGCAACAGCAACAGCAGCAACTATGTCGAGTGCCAGCGTACACGCTCCCCAAATTGCCGAC---------ATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................CAACTATGTCGAGTGCCAGC....................................2013.003001000000000000101000000000000000000000000000000000000000000000
........CCTTCGT--------------GCGTTTG---------------TTTACCT.............................................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................AACTATGTCGAGTGCCAGC....................................1912.002001000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACTATGTCGAGTGCCAGCGT..................................2512.002000000000000000000000000000002000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGTGCCAGCGTACACGC............................2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGAGTGCCAGCGTACACGCTCC.........................2511.001000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCC--------T------TATTTCT-----------------------------GGTTTTTCATTGCAG............................................................................................2611.001000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGTGCCAGCGTACA...............................1811.001000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................T-TTTCC--------T------TATTTCT-----------------------------GGTTTTTCATTGCAA............................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCTCCCCAAATTGCCGAC---------...2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AGCAACTATGTCGAGTGCCAGC....................................2211.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAACTATGTCGAGTGCC.......................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACTATGTCG.............................................2211.001000000000000000000000000000001000000000000000000000000000000000
....................................................TTACCTGT----------ATTTTGATTTTGATTATTAT.............................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.......ACCTTCGT--------------GCGTTTG---------------TTTACC..............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGCCAGCGTACACGCTCCCCA......................2511.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAACTATGTCGAGTGCCAGC....................................2111.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAATTGCCGAC---------ATT1711.001000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACGCTCCCCAAATTGCC...............2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCTCCCCAAATTGCCGAC---------C..2211.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AACTATGTCGAGTGCCAGCGT..................................2111.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACTATGTCGAGTGCCAG.....................................2311.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TA-AT------GTT-TTTCC--------T------TATTTCT-----------------------------GGTTTT.....................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.........................................................TGT----------ATTTTGATTTTGAT...................................................................................................................................................................................................................................................................................................................................................................................1720.501000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................................................................................................................CAA---CA---GCAACAGCAACAGCAA..............................................................21200.306000000000000000000000000000030300000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAGCAACT...................................................19190.051000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAGCAACAGCA.........................................................21200.051000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAACAGCAGCA......................................................21200.051000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................A---CA---GCAACAGCAACAGCAACA............................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAA---CA---GCAACAGCAACAGCA...............................................................20200.051000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CA---GCAACAGCAACAGCAACAG...........................................................21200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
TGTAT--ATCTATAT--------------ATGTTTT---------------CTTTTCTGT-----------------ATT--CTTT------TTTTTTT------------------------------------------------------------------------------------------TGTTTTTTT-TTTTTTTTGTTAAATTACTGCGGTTTATTGTTTTATGCGCTCACAAACTTGTATCTATT-TAAA--TTTTGTGTATGGTA-A---C---ATG-TTTAT--------TTTA-------------------------------------------TAACCTTAAGGCAACAG---CA---ACA------G------------CAG----------CAGCAG----CGCAGCAGCCGAGTGAATGAC---------AGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................ACAG---CA---ACA------G------------CAG----------CAGCAG----CG...............................21200.102200000
............................................................................................................................................................................................................................................................................................................................................................................AACAG---CA---ACA------G------------CAG----------CAGCAG----C................................21200.051000010
droGri2
CTCGTTTACCTTCGT--------------GCGTTTG---------------TTTACCTGTGTATATTTT---------------TG----------TTG----TACTC----TGCCCCTGACATATG-----------------GATGCCCCCCCTATATAACCCCCCTTA---TACTGAACTTTTGTTAATTGTTGTGTTTTTTT-----------------------------------------------------TA-A---------------------CATTTTT-CTTAT--------T----------TCT-----------------------G-GTTT----TCCATTTGCAGTACCAA---CA---ACA------ACA---------GCAACAATGTCGAGTGCCAGCGTACATGCCCCCCAAATTGCCGAC---------ATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................ACA---------GCAACAATGTCGAGTGCC.......................................2112.00220
..........................................................................................................................................................................................................................................................................................................................................................................................CA------ACA---------GCAACAATGTCGAG...........................................1911.00110
..................................................................................................................................................................................................................................................................................................................................................................................................ACA---------GCAACAATGTCGAGTGCCAGCGTA.................................2711.00101
.................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGTCGAGTGCCAGCGT..................................2011.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAACAATGTCGAGTGCCA......................................1911.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCGAGTGCCAGCGTACATGCC...........................2511.00110
droWil2
GTATTTCAACTTTGGTAATTTTGCTAAACAAATTTT---------------A-------------TTTT---TATATATT--CATT------TTTTT--------------------------------------------------------------------------------------------CGTTTTTGTTTTTGTTTTTAATGGCGAC--------------------AAAAAAAGTCTGTCGGTGAGTTT---TATT---------------TATTTTTCT-TGCGT--------TTTT--------CGCTTTTCCAGCCAGCAGCAAGTGTGGGG---GCTTTCCACAGCAGCAGCAG---CA---GCAACAACAACA-------------------------------------------ACAACAACA-----------ACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
CCCGTTTACCTTCGG--------------GTGTGTGCTGTGTTCGGGGGTATTTACCTG--CAG-----AAT------------------------------------------------------------------------GACCCCCACTCGATCTCACCTTGTTACAATTGATGAACTTTGA---ATCGAATCGTG--TTT-----------------------------------------------------TA-A---------------------TTTTGCT-CTCCC--------TTC---------------------------------------T----TCCCATTGCAGTGCCAA---CA---GCA------GCA---------TCCAACATGTCTATTGCCAGTGTTCATGGTCCCCAGATCGCCGAC---------ATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGTCCCCAGATCGCCGAC---------...2111.0010000100000
..........TTCGG--------------GTGTGTGCTGTGTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATGGTCCCCAGATCGCCGA.............2311.0010100000000
......TACCTTCGG--------------GTGTGTGCTGTGTTCGGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........TTCGG--------------GTGTGTGCTGTGTTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGCCAGTGTTCATGGTC..........................2111.0010100000000
..............................TGTGTGCTGTGTTCGGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........TTCGG--------------GTGTGTGCTGTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
CCCGTTTACCTTCGG--------------GTGTGTGCTGTGTTCGGGGGTATTTACCTG--CAG-----AAT------------------------------------------------------------------------GACCCCCACTCGATCTCACCTTGTTACAATTGATGAACTTTGA---ATCGAATCGTG--TTT-----------------------------------------------------TA-A---------------------TTTTGCT-CTCCC--------TTC---------------------------------------T----TCCCATTGCAGTGCCAA---CA---GCA------GCA---------TCCAACATGTCTATTGCCAGTGTTCATGGTCCCCAGATCGCCGAC---------ATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATGGTCCCCAGATCGCCGAC---------...2414.004400000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCCAGATCGCCGAC---------...1812.002200000
...............................................................................................................................................................................................................................................................................................................................................................................AA---CA---GCA------GCA---------TCCAACATGT...............................................2011.001010000
.............................................................................................................................................................................................................................................................................................TTTGCT-CTCCC--------TTC---------------------------------------T----TCCCATTG...............................................................................................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGTCCCCAGATCGCCGAC---------A..2211.001100000
..............................TGTGTGCTGTGTTCGGGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATGGTCCCCAGATCGCCGA.............2311.001010000
..............G--------------GTGTGTGCTGTGTTCGGGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGTGTTCATGGTCCCCAGATC..................2511.001010000
droAna3
TGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------TTTGG---------------------TTTCCCCATTTTCT-----------------------------TGTTTTTAATTGCAGTGCCAT---CA---ACA------GCA---------GCCAATATGTCGATCGCCAGCGTTCACGGTCCCCAAATCACCGAC---------ATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCGCCAGCGTTCACGGTC..........................2312.002000002
....................................................................................................................................................................................................................................................................................................................................................................................................A---------GCCAATATGTCGATCGCCAGC....................................2212.002011000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGCGTTCACGGC...........................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................CA---ACA------GCA---------GCCAATATGTC..............................................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTCCCCAAATCACCGAC---------AT.2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCCAATATGTCGATCGCCAGCGT..................................2311.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCCAGCGTTCACGGTC..........................2011.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................A---------GCCAATATGTCGATCGCC.......................................1911.001100000
droBip1
GAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACTTTAA----CTGA-----T--T----------------------------------------------------------------------------TCGG---------------------TTTCCACCTTTTCT-----------------------------TGTTTTTAATTGCAGTGCCAT---CA---ACA------GCC---------ACCAATATGTCGATCGCCAGCGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotal
No Reads
droKik1
CTCGTTCACCTTCGCCG------------GCGATCG---------------TTTACCTGGCCAG-----CAT------------------------------------------------------------------------TGAACCCGTGCTGCCGCTCGTCGTTACATTTGATGAACTCC-A----CTGA-----C--T---------------------------------------------------------------------------CTGTG-----CTTCTCTC--------CTC---------------------------------------T---TCCTCTTTGCAGTGCCAT---CA---GCA------GCA---------GCCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotal
No Reads
droFic1
TTGTCTTTTTTCTTTCG------------A---T-------------------TTCTCGT----------TTTTTGTATTTTGTTGTTGTT--------------------------------------------------------------------------------------------------TTTTTTTGTTTTTTTCCTTCCAAATTAC--------------------ACAAACAAAATGGCGGCGGGTGC---TACT-------------------------------------------------TGT-----------------------GGGGTC----TCCGCACGCAGCAGCAACATCAACAGCAAAAGCAACA-------------------------------------------GCAACAGCA-----------ACASizeHit CountTotal NormTotal
No Reads
droEle1
TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTTAA---ACTTAATTGTA--TAC-----------------------------------------------------CA-------------------------------------TTTT----CC---------------------------------------T----TCTCTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotal
No Reads
droRho1
ACCCTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTGTAACTTGTGATGAACTTTAA----CTGA-----C--A---------------------------------------------------------------------------TTATG-----CT-TTCCC--------T----------------------------------------------CCTCTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotal
No Reads
droBia1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotal
No Reads
droTak1
ACT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----C--G---------------------------------------------------------------------------TTTTT-----C------CGTTTTCCTCAAC-------------------------------------------TCTCTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotal
No Reads
droEug1
CTCGTTTACCTTCGCCA------------GCGAGCG---------------TTTACCTGGCCAG-----TAT----------------------------------------------------------------------------------TGAACTCACCTTGTTACATTTGATGAACTTTAA----CTGA-----C--T---------------------------------------------------------------------------TTTTGTTTTCCT-TTCAT--------CTT---------------------------------------T----TCCTTTTGCAGTGCCAT---CA---ACA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotal
No Reads
dm3
TTCTTCTGCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG---------------------TTTC-------------------------------------------CCTCTTTGCAGTGCCAT---CA---GCA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGTGTTCACGGT...........................2517.0070000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000110000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................CCAT---CA---GCA------G------------CCAATATGTCG.............................................2117.0070000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGATCGCCAGTGTTC................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGTGTTCACGGTC..........................2614.0040000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGTGTT.................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGTGT..................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATCGCCAGTGTTCACGGTC..........................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................A---GCA------G------------CCAATATGTCGATCGC........................................2112.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGTGTTCAC..............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCC.......................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGTG...................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCCAT---CA---GCA------G------------CCAATATGTCGATCGC........................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCCAGTGTTC................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCCAGTGTT.................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................T---CA---GCA------G------------CCAATATGTCGATCGCCAGT....................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTGTTCACGGTCCC........................1912.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGTGTTC................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CCAATATGTCGATCGCCAGTGTT.................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATCGCCAGTGTTC................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGGTCCCCAAATCGCCGAC---------ATC2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCCAAATCGCCGAC---------AT.2011.0010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCCAGTGTTCA...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCCAGTGTTCACG.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGTGTTCACGGTCC.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCCAT---CA---GCA------G------------CCAATATGTCGATCG.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGATCGCCAGTG...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGTGTTCACG.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AT---CA---GCA------G------------CCAATATGTCGATCGCCA......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATCGCCAGTGTTCACGGTCC.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGCCAGTGTTCACGGTCCCCAA.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGATCGCCAGTGTTCACG.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AT---CA---GCA------G------------CCAATATGTCGATCGCC.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAT---CA---GCA------G------------CCAATATGTCGA............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................T---CA---GCA------G------------CCAATATGTCGATCGCCAG.....................................2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAT---CA---GCA------G------------CCAATATGTCGATCGC........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGTTCACGGTCCCCA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CA------G------------CCAATATGTCGATCGCCAGTGTT.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................CA---GCA------G------------CCAATATGTCGATCGC........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCCAT---CA---GCA------G------------CCAATATGTCGAT...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCGCCAGTGTTCACGGTCCCCT......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGATCGCCAGTGTTCA...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCGCCAGTGTTCACGGTCC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACGGTCCCCAAATCGCCGAC---------...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AGTGCCAT---CA---GCA------G------------CCAATATGTCGATC..........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGTGTT.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG---------------------TTTC-------------------------------------------CCTCTTTGCAGT...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................A---GCA------G------------CCAATATGTCGATCGCCAGT....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CCAATATGTCGATCGCCAGTGTTCACGGTC..........................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG---------------------TTTC-------------------------------------------CCTCTTTGCA.............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CA------G------------CCAATATGTCGATCGCC.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGC....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CCAATATGTCGATCGCCAG.....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................CA---GCA------G------------CCAATATGTCGATCG.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCAGTGTTCACGGTCCC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGTGTTCACGG............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................T---CA---GCA------G------------CCAATATGTCGATCGCC.......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCCAGT....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATCGCCAGTGTTCACG.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CCAT---CA---GCA------G------------CCAATATGTC..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.TCTTCTGCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG---------------------TTTC-------------------------------------------CCTCTTTGC..............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCGATCGCCAGTGTT.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTCCCCAAATCGCCGA.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCGCCAGTGTTCACGGTCCC........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG---------------------TTTC-------------------------------------------CCTCTTTG...............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGGTCCCCAAATCGCC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTCCCCAAATCGCCGAC---------...2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACGGTCCCCAAATCGCCGAC---------ATC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTGCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG---------------------TTTC-------------------------------------------CCTCTT.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCCAGTGTTCT...............................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCCAGTGTTCAC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TGCCAT---CA---GCA------G------------CCAATATGTCG.............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTCTG---CTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTG---------------------TTTC-------------------------------------------CCTCTTTGCAGTGCCAT---CA---GCA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................A---GCA------G------------CCAATATGTCGATCGCCAGT....................................2512.00211000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCCAGTGTT.................................2512.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCGCCAGTGTTCAC..............................1912.00210100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCC.......................................1812.00220000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CCAATATGTCGATCGCCAGTGT..................................2211.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACGGTCCCCAAATCGCC...............2111.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAT---CA---GCA------G------------CCAATATGTCGA............................................2111.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATGTCGATCGCCAGTGTTCAC..............................2211.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCA......................................1911.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGTGTTCACGGTCCC........................1911.00100000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCGATCGCCAGTGTT.................................2111.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGT....................................2111.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACGGTCCCCAAATC..................1811.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................A---GCA------G------------CCAATATGTCGATCGCCAG.....................................2411.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGCCAGTGTTCACGGT...........................2011.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATCGCCAGTGTTCAC..............................2011.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAATATGTCGATCGCCAGTGT..................................2311.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CCAATATGTCGATCGC........................................1620.50100000000001000000
droSec2
TTCTTCTGCCTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---------------------TTTC-------------------------------------------CCTCTTTGCAGTGCCAT---CA---GCA------G------------CCAATATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................A---GCA------G------------CCAATATGTCGATCGCCAGT....................................2511.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATCGCCAGTGTTCACG.............................2211.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TCACGGTCCCCAAATCGCCGAC---------...2211.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGCCAGTGTTCACGGTCCCC.......................2411.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCCAGTGT..................................2411.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCCAGTGTT.................................2511.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAATATGTCGATCGCCAGT....................................2211.0010010
droYak3
TTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------------T------TTTC-------------------------------------------CCTCTTTACAGTGCCAT---CA---GCA------G------------CCAACATGTCGATCGCCAGTGTTCACGGTCCCCAAATCGCCGAC---------ATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................AACATGTCGATCGCCAGTGTTCACG.............................2511.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................G------------CCAACATGTCGATCGCCAGTGTTCAC..............................2711.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................A------G------------CCAACATGTCGATCGCCAGT....................................2211.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCGCCAGTGTTCACGGT...........................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAGTGTTCACGGTCCCC.......................2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................AACATGTCGATCGCCAGTGT..................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................CTTTACAGTGCCAT---CA---GCA------G------------CCAA....................................................2411.00100000010000
droEre2
CACCACCACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCAGCACCACCAA---CA---GCA------G------------CCGCAACAGCAATCGCCGGCGGCCACGA------ATGCGCCAATTTCCGTCTAATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/16/2015 at 08:17 PM