ID:

dvi_12433

 Coordinate:

scaffold_12963:17887314-17887464 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_2313:4]; CDS [Dvir\GJ17745-cds]; intron [Dvir\GJ17745-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAATAACAACAATAACAACAACAGCGATGATCGCAGCGATCGTGATAACGGTAAGTGTTCAGCTTAGAGATGGGCGCGTGACTCTTGCGCAAGTATCGGTTCAGCAGAAGCACGAAAATTGAAAGAAAATACACGAAAATAGTAAAAGAATGCGCTAGAAGAGCGCGCATGACGTTCCGTTCAGCTCTGATTCTGACAGCTTTCCCTATAAACGCACGTCCTTTATCTCTTACTATGGGGGCATGCAGTCC
**************************************************...((....(((.((((((.((((((((((.((((((((((.((((...((((((....))........)))).....))))..................)))))...))))))))))..........))))).))))))..)))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060673
9_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060680
 9xArg_testes_total
 SRR1106730
embryo_16-30h
 SRR060660
Argentina_ovaries_total
 SRR060669
160x9_females_carcasses_total
 GSM1528803
follicle cells		 V116
male body		 M027
male body		 SRR060689
160x9_testes_total
 SRR060687
9_0-2h_embryos_total
 V047
embryo
 M028
head
 SRR060663
160_0-2h_embryos_total
 SRR060659
Argentina_testes_total
 M061
embryo
 V053
head
..................CAACAGCGATGATCGCAGG...................................................................................................................................................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................AACAACAGCGATGATCGCAGC...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TGATCGCAGCGATCGTGATAACGGCT...................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GCGATGATCGCAGCGATCGTGATAACG......................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................ACAGCGATGATCGCAGCGATCGTGA.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTCAGCTTAGAGAAGGGGGC.............................................................................................................................................................................. 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................TCAGCTTAGAGAAGGGGG............................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................AAGCATGGGCTAGAAGAGCA...................................................................................... 20 3 9 0.33 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CGCATGACGTTTCGTT...................................................................... 16 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................AAGAAAAGAGTAAAAGAATG................................................................................................... 20 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................ACTTAGAGATGGGCGCGTGAC......................................................................................................................................................................... 21 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................CTCACGGAAGTATCGGTTC..................................................................................................................................................... 19 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
........................................................GATCTGCTTAGAGAAGGGCG............................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................CAGCTTAGAGAAGGGGGC.............................................................................................................................................................................. 18 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................CTGCTTAGAGATGGGGGC.............................................................................................................................................................................. 18 2 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................AGGAATGCGCTCGAATAGCG...................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................CTGCTTAGAGAAGGGCGC.............................................................................................................................................................................. 18 2 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................TCTGCTTAGAGAAGGGAGC.............................................................................................................................................................................. 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................TCTGCTTAGAGAAGGGTGC.............................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................................GATTCTGACATCTTTGCCC............................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................ATCAGCTTAGAGAAGGGGG............................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CAAAAGAGTGCGCTCGAAG.......................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................................ATCTGCTTAGAGAAGGGCG............................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTTATTGTTGTTATTGTTGTTGTCGCTACTAGCGTCGCTAGCACTATTGCCATTCACAAGTCGAATCTCTACCCGCGCACTGAGAACGCGTTCATAGCCAAGTCGTCTTCGTGCTTTTAACTTTCTTTTATGTGCTTTTATCATTTTCTTACGCGATCTTCTCGCGCGTACTGCAAGGCAAGTCGAGACTAAGACTGTCGAAAGGGATATTTGCGTGCAGGAAATAGAGAATGATACCCCCGTACGTCAGG
**************************************************...((....(((.((((((.((((((((((.((((((((((.((((...((((((....))........)))).....))))..................)))))...))))))))))..........))))).))))))..)))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M027
male body		 V047
embryo
 SRR060668
160x9_males_carcasses_total
 M047
female body
 V053
head
 GSM1528803
follicle cells		 SRR060678
9x140_testes_total
......................................................................................................................................................................................................................GTGCAGGAAATAGCGGAAGAT................ 21 3 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................TCGTCTTGGTGCCTTTATCTT................................................................................................................................ 21 3 2 0.50 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................TGGGTGCAGGAAAGGGAGAA.................... 20 3 3 0.33 1 0 0 1 0 0 0 0 0
.......................................................................................................CGTCTTGGTGCCTTTATCT................................................................................................................................. 19 3 20 0.15 3 0 3 0 0 0 0 0 0
........................................................................................................................................................................TACTGAAAAGGAAGTCGAGAC.............................................................. 21 3 7 0.14 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................................GGAAGTCGAGACTAAGAT........................................................ 18 2 12 0.08 1 0 0 0 0 1 0 0 0
.............TCGTTGTTGTGGCTACTAGG.......................................................................................................................................................................................................................... 20 3 18 0.06 1 0 0 0 0 0 1 0 0
..TATTGTTGTTATTGTTGTTGT.................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 1
..................................................................................................................................................................................CTAGTCGAGACGAAGACTT...................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0
.TTATTGTTGTTATTGTTGTTGT.................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:17887264-17887514 + dvi_12433 CAA--T-AACAACAATAACAACAACAGCGATGATCGCAGCGATCGTGA------------------------------T---------------------AACGGTAA--------------------GTGTTCAGCTTAGA-------------GA--TGGGC----GCGTGACTCTT--------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAAGTATCGGTTCAGCAGAAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAA---------------------------ATTGAAAGAAA------------------------ATACACGA--A--------AATAGTA--AAAGAATGCGC----TAGA-AGAGCGCGCATGACGTTCCGTTCAGCTCTGATTCTGACAGCTTTCCCTATAAACGCACGTCCTTTATCTCTTACTATGGGGGCATGCAGTCC
droMoj3 scaffold_750:1306-1607 - CAA--G-AACAACAGCAACAACAACAAGTAAGAAAGCTCTAGTCGAGACTGCTCGACTACGAGATCCCCTGAAC----C----CTTGGAGCAATA-----------GA--------------------TATTTCAA------------------------------------TACTTTT--------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGACTTTCAGCTTA-----CACAAAAAACACGCACACACACACACCCACACACACGTACGCACACACAGGTATACATACACACACACGCATACAGACACAAACGCATACACACACACACATACACACACACAAACACATACAAGCAACCACGCATAAACACGCATGGGCTGCAGTG-------------------------------------------------------------------------------------------------------------------------------------------TGCGCTTACTATGACAACTTAAAT-------------------------------------------------------------TGT
droGri2 scaffold_15110:13908087-13908231 - CAA--T-AACAAAAACAACAACAACAATGAAAATAACAACAAACATGA------------------------------C---------------------AACGA--------GGGATTAGCCAGTCGTGTCCGCATCTCGGTGGGAGTCTCGATTGCAA----A-------AGT-----------------------------------------------------------------------------------------------------------AGCCGA----------------------------------------------------AAATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTAGAAA------------------------ACATTCGACTA--------AAAAACA-A-----------------------------------------AAAA-------------------------------------------------------------------
droWil2 scf2_1100000004510:2371461-2371595 + CAA--C-AACAACAACAACAGCAGCAGCAACAGTAACAACATTTCAGC-----------------------------------------------------------------------------------------TACAA-------------AA--GGGTC-----GACGACTTTT--------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCCGCATTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCAGAGGGACGTCTATAAGGAAACTGA--------------------------------------GAAG------------------------GCTAAAGG--A--------GGAGGTAGA-----------------------------------------GAAG-------------------------------------------------------------------
dp5 2:13264747-13264908 - CAG--G-AACAGCAATAGCAACATCGGCGACGACAACGGGAC-------------------------------------------------------------GGGGCCCCGGA---------------------------------------------------C-----------------------------------TACAGCAGTGCTCACAATTAGTGCGTGTTGGC--------------------------------------------------AAC--CAGCAGCAGCAATAGTAACAACAACTCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------ACT---GAGAG------------------------ATATAAAT--A--------AATAGTA------------------AAT-AAATGGGGAAAAGCACGC-------------------------------------------------------------------------A
droPer2 scaffold_14:1270945-1271126 + CAA--T-AGCAACAAAAGCAACAGCAGCAGCAAGAGCAGCAACG------------------------------ACAGCAGTGTCAGTGGCACAAAAGAATGTGGCAAGCATGG---------------------------------------------------GGCTCAT----------------TCCATTCCG---------------------------------------------------------------------------------------------------------------------------TTCGTGTCGTTTCGCTGC-----------------------------GGCTCGGCGGGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAATCGTAAACATGTCCGACC--------ATGGGGAGAG---------------------------------------------------------GATATGC----AAAC-AT------------------------AT-------------------------------------------------------------CGC
droAna3 scaffold_13334:1020249-1020399 - CAG--C-AGCAGCAGCAGCAACAGCAGCTGCAGCAGCAGCCGCC------------------------------AC-----------------------------CCAACTCGATTCCCAATCAGCAGCCTCCCGGCTCGGGGGTGGGCCCCGGTGGAGG----A-------GGCGGC---------------------------------------------------------------------------------------A------------------------------------------------------------------------TAGGTGGAGGCGGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---------------------------AGCAA------------------------ATACAAAA--A--------AAAAAAAAA-----------------------------------------AAAA-------------------------------------------------------------------
droBip1 scf7180000396717:320999-321130 + TAA--T-AACAACAACAGCAACAGCAGCAGCCATGGCGGCGATGTG-G------------------------------A---------------------GGCCATGA--------------------AAGGTAGGTCAAAA-------------GGGGT--------------------------------------------------------------------------------------------------------------------------------CAAGGACACGAACTTAG----------------------------------------------------TTTAAAGATTTATTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAA------------------------GTAAAAAA--A--------AATAAAAGA-----------------------------------------AAAT-------------------------------------------------------------------
droKik1 scf7180000302256:175716-175813 - CAT--C-CGCTTCAAACACCACATCAGCGGCAGCCAAGGCCAGC---G------------------------------G---------------------CAAGGCGGGATCGG---------------------------------------------------GCTCAGG----------------ATCGGGAG---GC--------------------------------TCAGG-----------------------------------------------------------------------------------------------------------------------CTCCGGCTCTGGTTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-------------------------------------------------------------------
droFic1 scf7180000454113:3152680-3152867 + CAA--C-AACAACAGCAACAACAACAGCAGCAACTGCAGAGGAGCA-A------------------------------T---------AGCAGC-----------TGA--------------------GAGTTCAGTTGCGA-------------AA--CCGGC-GAAGCGCGACTGTT--------------------GCCAATGCAACGCTTAGAATTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACCAGCAACAACAACAAC----------------------------------AGCAACAACAATACTA--ACAGCAGACAC----TGCA-GTAGCAACAACAA-------CGGTACAT-------------------------------------------------------------TCA
droEle1 scf7180000491047:1854812-1854967 + TAA--C-AACAGCAACAACAGCAACAGCTAAAGGC--GACCCAC---A------------------------------C---------GGCGGAT-----------GA--------------------AGTTGCAATTCAAA---------------------------------------------------------G--------TCATAAACACGTGGAGCGTGGGCGCAAAGTCTCAGCTAAGCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAAG---------------------------AATGAGGGGAA------------------------AAG--CGG--A--------AAAAGCG--GGAAAA---G------------------------------CCGGGAAA-------------------------------------------------------------GCG
droRho1 scf7180000779337:2070-2193 + CAG--C-AGCAACAACAGCAACAGCAGCAACAT-TGCAGCTACG------------------------------ACAGC----------------------------AACACATCTGCAGC--------------------------------------------------------------------------------------------------------ACAGCTG-----------------------------CT------C---CTCAAAGTTCGCCTG--AGGTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------ACTGAGAAAAA------------------------ATATAAGA--A--------AAGAGCAAA-----------------------------------------AAAA-------------------------------------------------------------------
droBia1 scf7180000302428:487315-487479 + CAA--CTAGCAGCAACATCTATAGCAGCAGCGG-AGCAGCAGCT------------------------------TAAA-----------------------------AATACATTTTTCACAATGAAGCA------------------AACGAGCGGAGG-------------------------------------------------------------------------------------------------------------CAAGAAAAA------TTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------GCCCGAGAAAA-TT-----AGTTTTTCAAGAAAAAATA--CAA--A--------AATAACA--AGAAGA---GTGAGAG-AGACG-GCGCGA------------AAGA-------------------------------------------------------------------
droTak1 scf7180000415397:224200-224312 + CCAAGT-GCCGACCACCGCAACAGCGGCATCTGCAGCATCTGTCCAGG------------------------------G---------------------AATGGCAATGGG------------------------------------AATGGGTGGGGG----C-------ATGGGC---------------------------------------------------------------------------------------A------------------------------------------------------------------------TGGGATTGGGCGGCGGTGGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------AACATG-----------------------------------------GGAA-------------------------------------------------------------------
droEug1 scf7180000409006:27051-27186 - CAA--C-AACAGCAGCACCAGCAGCAGCAACATGCTCAGGAGC------------------------------------------------AATTAAGT-------------------------------TTGCAT------------------------------------CAGCAATGGGGACCATTCAAA------G--------TC---------------------------------------------------------------------------------------------------------TACAGTGAGTATTGACTCGAGTT-----------------------------TGCTCAGAAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------GCCG-------------GAAA---------------------------ATTGAGAGAG----------------------------------------------------------------------------------------------AGTA-------------------------------------------------------------------
dm3 chrX:10821424-10821629 + CAC--C-GGCGACAGCAGCAACATCAGCTGCGATCGCGAAGATCAGGC------------------------------G---------------------GATGGCGAACTGGA---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGAGTCTTCGTTCAGCTGGTCGAGCAGTCTTCGAATTTTGAAAAA----AGCCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTGAAATAAAAAAATTGTTGTACGCCAAGGCAA-----------------------------------AGTGC----TAAT-AAATCGAGCAAAATGCGCTGCCTGGCAT-------------------------------------------------------------TGA
droSim2 x:10279408-10279611 + CAC--C-GGCGACAGCAGCAACATCAGCTGCGATCGCAAAGATCAAGC------------------------------G---------------------GATGGCGAACTGGA---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGAGTCTCCGTTCAGCTGGTCGAGCAGTCTTCGAATCTTGAAAA-----AACCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTTAAAGAAA-ACATCGTTGTACGCCAAGGCAA-----------------------------------AGTGC----TAAT-AAATCGAGCAAAATGCGCTGCCTGGCAT-------------------------------------------------------------TGA
droSec2 scaffold_15:1524422-1524624 + CAC--C-GGCGACAGCAGCAACATCAGCTGCGATCGCGAAGATCAAGC------------------------------G---------------------GATGGCGAACTGGA---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGAGTCTCCGTTCAGCTGGTCGAGCAGTCTTCGAATCTTGAAAAA------CCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTTAAAGAAA-ACATCGTTGTACGCCAAGGCAA-----------------------------------AGTGC----TAAT-AAATCGAGCAAAATGCGCTGCCTGGCAT-------------------------------------------------------------TGA
droYak3 3L:8411388-8411551 - CAG--C-AACAGCAATAATAACAACAACAACAAAAGCGGTAACA------------------------------ACAAC-----------------------------AAGAAGCCGTCACAGTTGCGCC-----------------------------------------------------------------------------------------------ATCGTTG-----------------------------CG------CATGCGCAGCGTATGAC--CAAGAGCACAGACAGTG----------------------------------------------------AAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGATGGCGAG-----------------------------------------------AGAGAG------------------------AGAGAGAG--A--------GAGAGTG-------------------AGAGA-GTGAGC------------GAGA-------------------------------------------------------------------
droEre2 scaffold_4690:12954406-12954553 + CAA--C-AGCAACAACAACAGCAACAGCAACAACAACAGCAATT---------------------------------------------------GTTT-------------------------------TTATG---GTAG-------------CA--GCGTT-----GGCGGCGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTCTGAAGCGGCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACAGCCAACAAACCAAAAAAAAAAAAAAA----------------------------------AAACAGAAAAATAAAA--AGAAAAAACAC-----------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CAA--T-AACAACAATAACAACAACAGCGATGATCGCAGCGATCGTGA------------------------------T---------------------AACGGTAA--------------------GTGTTCAGCTTAGA-------------GA--TGGGC----GCGTGACTCTT--------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAAGTATCGGTTCAGCAGAAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAA---------------------------ATTGAAAGAAA------------------------ATACACGA--A--------AATAGTA--AAAGAATGCGC----TAGA-AGAGCGCGCATGACGTTCCGTTCAGCTCTGATTCTGACAGCTTTCCCTATAAACGCACGTCCTTTATCTCTTACTATGGGGGCATGCAGTCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................CAACAGCGATGATCGCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000002000000000000000000000000000000000000000
...................AACAACAGCGATGATCGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000010000
..............................TGATCGCAGCGATCGTGA------------------------------T---------------------AACGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
..........................GCGATGATCGCAGCGATCGTGA------------------------------T---------------------AACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
.......................ACAGCGATGATCGCAGCGATCGTGA------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
CAA--G-AACAACAGCAACAACAACAAGTAAGAAAGCTCTAGTCGAGACTGCTCGACTACGAGATCCCCTGAAC----C----CTTGGAGCAATA-----------GA--------------------TATTTCAA------------------------------------TACTTTT--------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGACTTTCAGCTTA-----CACAAAAAACACGCACACACACACACCCACACACACGTACGCACACACAGGTATACATACACACACACGCATACAGACACAAACGCATACACACACACACATACACACACACAAACACATACAAGCAACCACGCATAAACACGCATGGGCTGCAGTG-------------------------------------------------------------------------------------------------------------------------------------------TGCGCTTACTATGACAACTTAAAT-------------------------------------------------------------TGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................TACGAGATCCCCTGAAC----C----CTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.50101000000
.....................................TCTAGTCGAGACTGCTCGACTACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.459900000
.............................................................................................................................................................................................................................................................................................................................................................................TCAGCTTA-----CACAAAAAACACGCACACAC............................................................................................................................................................................................................................................................................................................................................................................28200.153300000
.............................................................................................................................................................................................................................................................................................................................................................................TCAGCTTA-----CACAAAAAACACGCAC................................................................................................................................................................................................................................................................................................................................................................................24200.153300000
................................................................................................................................TATTTCAA------------------------------------TACTTTT--------------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGA................................................................................................................................................................................................................................................................................................................................................................................................................21200.153300000
............................TAAGAAAGCTCTAGTCGAGACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
..........................................................ACGAGATCCCCTGAAC----C----C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
.........................................................TACGAGATCCCCTGAAC----C----CTTGGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................ACACGCACACACACACACCCAC..................................................................................................................................................................................................................................................................................................................................................................22200.051000010
.........................................................TACGAGATCCCCTGAAC----C----CTTGGAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACGCATAAACACGCATG.............................................................................................................................................................................................................................................21200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................TCAGCTTA-----CACAAAAAACACGCACA...............................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.......................................................................AAC----C----CTTGGAGCAATA-----------GA--------------------TAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droGri2
CAA--T-AACAAAAACAACAACAACAATGAAAATAACAACAAACATGA------------------------------C---------------------AACGA--------GGGATTAGCCAGTCGTGTCCGCATCTCGGTGGGAGTCTCGATTGCAA----A-------AGT-----------------------------------------------------------------------------------------------------------AGCCGA----------------------------------------------------AAATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTAGAAA------------------------ACATTCGACTA--------AAAAACA-A-----------------------------------------AAAA-------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................A----A-------AGT-----------------------------------------------------------------------------------------------------------AGCCGA----------------------------------------------------AAATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT.........................................................................................................................................................................2011.00101
droWil2
CAA--C-AACAACAACAACAGCAGCAGCAACAGTAACAACATTTCAGC-----------------------------------------------------------------------------------------TACAA-------------AA--GGGTC-----GACGACTTTT--------------------G-------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCCGCATTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCAGAGGGACGTCTATAAGGAAACTGA--------------------------------------GAAG------------------------GCTAAAGG--A--------GGAGGTAGA-----------------------------------------GAAG-------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....C-AACAACAACAACAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.40800080
..A--C-AACAACAACAACAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300030
.................ACAGCAGCAGCAACAGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.14100010
.............AACAACAGCAGCAGCAACAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11101000
..........AACAACAACAGCAGCAGCAACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.AA--C-AACAACAACAACAGCAGCAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.AA--C-AACAACAACAACAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100
............CAACAACAGCAGCAGCAACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..........AACAACAACAGCAGCAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
dp5
CAG--G-AACAGCAATAGCAACATCGGCGACGACAACGGGAC-------------------------------------------------------------GGGGCCCCGGA---------------------------------------------------C-----------------------------------TACAGCAGTGCTCACAATTAGTGCGTGTTGGC--------------------------------------------------AAC--CAGCAGCAGCAATAGTAACAACAACTCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------ACT---GAGAG------------------------ATATAAAT--A--------AATAGTA------------------AAT-AAATGGGGAAAAGCACGC-------------------------------------------------------------------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CAA--T-AGCAACAAAAGCAACAGCAGCAGCAAGAGCAGCAACG------------------------------ACAGCAGTGTCAGTGGCACAAAAGAATGTGGCAAGCATGG---------------------------------------------------GGCTCAT----------------TCCATTCCG---------------------------------------------------------------------------------------------------------------------------TTCGTGTCGTTTCGCTGC-----------------------------GGCTCGGCGGGAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGAAAATCGTAAACATGTCCGACC--------ATGGGGAGAG---------------------------------------------------------GATATGC----AAAC-AT------------------------AT-------------------------------------------------------------CGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CAG--C-AGCAGCAGCAGCAACAGCAGCTGCAGCAGCAGCCGCC------------------------------AC-----------------------------CCAACTCGATTCCCAATCAGCAGCCTCCCGGCTCGGGGGTGGGCCCCGGTGGAGG----A-------GGCGGC---------------------------------------------------------------------------------------A------------------------------------------------------------------------TAGGTGGAGGCGGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---------------------------AGCAA------------------------ATACAAAA--A--------AAAAAAAAA-----------------------------------------AAAA-------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................C---------------------------------------------------------------------------------------A------------------------------------------------------------------------TAGGTGGAGGCGGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......................................................................................................................................................................................................1811.001000001
...............................................................................................................................................................................GGC---------------------------------------------------------------------------------------A------------------------------------------------------------------------TAGGTGGAGGCGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droBip1
TAA--T-AACAACAACAGCAACAGCAGCAGCCATGGCGGCGATGTG-G------------------------------A---------------------GGCCATGA--------------------AAGGTAGGTCAAAA-------------GGGGT--------------------------------------------------------------------------------------------------------------------------------CAAGGACACGAACTTAG----------------------------------------------------TTTAAAGATTTATTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAA------------------------GTAAAAAA--A--------AATAAAAGA-----------------------------------------AAAT-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CAT--C-CGCTTCAAACACCACATCAGCGGCAGCCAAGGCCAGC---G------------------------------G---------------------CAAGGCGGGATCGG---------------------------------------------------GCTCAGG----------------ATCGGGAG---GC--------------------------------TCAGG-----------------------------------------------------------------------------------------------------------------------CTCCGGCTCTGGTTCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CAA--C-AACAACAGCAACAACAACAGCAGCAACTGCAGAGGAGCA-A------------------------------T---------AGCAGC-----------TGA--------------------GAGTTCAGTTGCGA-------------AA--CCGGC-GAAGCGCGACTGTT--------------------GCCAATGCAACGCTTAGAATTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACCAGCAACAACAACAAC----------------------------------AGCAACAACAATACTA--ACAGCAGACAC----TGCA-GTAGCAACAACAA-------CGGTACAT-------------------------------------------------------------TCASizeHit CountTotal NormTotal
No Reads
droEle1
TAA--C-AACAGCAACAACAGCAACAGCTAAAGGC--GACCCAC---A------------------------------C---------GGCGGAT-----------GA--------------------AGTTGCAATTCAAA---------------------------------------------------------G--------TCATAAACACGTGGAGCGTGGGCGCAAAGTCTCAGCTAAGCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAAG---------------------------AATGAGGGGAA------------------------AAG--CGG--A--------AAAAGCG--GGAAAA---G------------------------------CCGGGAAA-------------------------------------------------------------GCGSizeHit CountTotal NormTotal
No Reads
droRho1
CAG--C-AGCAACAACAGCAACAGCAGCAACAT-TGCAGCTACG------------------------------ACAGC----------------------------AACACATCTGCAGC--------------------------------------------------------------------------------------------------------ACAGCTG-----------------------------CT------C---CTCAAAGTTCGCCTG--AGGTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------ACTGAGAAAAA------------------------ATATAAGA--A--------AAGAGCAAA-----------------------------------------AAAA-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAA--CTAGCAGCAACATCTATAGCAGCAGCGG-AGCAGCAGCT------------------------------TAAA-----------------------------AATACATTTTTCACAATGAAGCA------------------AACGAGCGGAGG-------------------------------------------------------------------------------------------------------------CAAGAAAAA------TTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------GCCCGAGAAAA-TT-----AGTTTTTCAAGAAAAAATA--CAA--A--------AATAACA--AGAAGA---GTGAGAG-AGACG-GCGCGA------------AAGA-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCAAGT-GCCGACCACCGCAACAGCGGCATCTGCAGCATCTGTCCAGG------------------------------G---------------------AATGGCAATGGG------------------------------------AATGGGTGGGGG----C-------ATGGGC---------------------------------------------------------------------------------------A------------------------------------------------------------------------TGGGATTGGGCGGCGGTGGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------------------------AACATG-----------------------------------------GGAA-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CAA--C-AACAGCAGCACCAGCAGCAGCAACATGCTCAGGAGC------------------------------------------------AATTAAGT-------------------------------TTGCAT------------------------------------CAGCAATGGGGACCATTCAAA------G--------TC---------------------------------------------------------------------------------------------------------TACAGTGAGTATTGACTCGAGTT-----------------------------TGCTCAGAAGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------GCCG-------------GAAA---------------------------ATTGAGAGAG----------------------------------------------------------------------------------------------AGTA-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CAC--C-GGCGACAGCAGCAACATCAGCTGCGATCGCGAAGATCAGGC------------------------------G---------------------GATGGCGAACTGGA---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGAGTCTTCGTTCAGCTGGTCGAGCAGTCTTCGAATTTTGAAAAA----AGCCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTGAAATAAAAAAATTGTTGTACGCCAAGGCAA-----------------------------------AGTGC----TAAT-AAATCGAGCAAAATGCGCTGCCTGGCAT-------------------------------------------------------------TGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................TCTTCGTTCAGCTGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GAAAAA----AGCCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTGA..........................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GAATTTTGAAAAA----AGCCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TTCAGCTGGTCGAGCAGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................AA----AGCCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTGAAATAAA....................................................................................................................................................................2012.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCTGGTCGAGCAGTCTTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGCGCTGCCTGGCAT-------------------------------------------------------------...1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGCCAAGGCAA-----------------------------------AGTG......................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGCGCTGCCTGGCAT-------------------------------------------------------------T..2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AGTCGCTTGC--------------------------------CGAGTCTTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AATTTTGAAAAA----AGCCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTGAAATAAA....................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-AAATCGAGCAAAATGCGCTGCC......................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................................................AACTGGA---------------------------------------------------GTCTCTC----------------GTCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGAGCAAAATGCGCTGCCTGGC..................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTGAAATAAAAAAATTGT............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GTTCAGCTGGTCGAGCAGTCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TCGTTCAGCTGGTCGAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GCAGTCTTCGAATTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------AGTGC----TAAT-AAATCGAGCAAAATGCGC..........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................TTCGTTCAGCTGGTCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTGTACGCCAAGGCAA-----------------------------------AGT.......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGTTGTACGCCAAG.................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................CTTGC--------------------------------CGAGTCTTCGTTCAGCTGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TTCAGCTGGTCGAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AGCTGGTCGAGCAGTCTTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....C-GGCGACAGCAGCAACATCAGCTGCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TGAAAAA----AGCCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTGA..........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AGCAGTCTTCGAATTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGC--------------------------------CGAGTCTTCGTTCAGCTGGTCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GAGTCTTCGTTCAGCTGGTCGAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................GTCTTCGTTCAGCTGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TCGTTCAGCTGGTCGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GAGTCTTCGTTCAGCTGGTCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CGAGTCTTCGTTCAGCTGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-----------------------------------AGTGC----TAAT-AAATCGAGC...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................A---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................AGTCTTCGTTCAGCTGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCTGGTCGAGCAGTCTTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................CAGTCTTCGAATTTTGAAAAA----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TTCAGCTGGTCGAGCAGTCTTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAAATGCGCTGCCTGGC..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GGTCGAGCAGTCTTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGCTGCGATCGCGAAGATCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................CTGGTCGAGCAGTCTTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAAAATGCGCTGCCT.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAC--C-GGCGACAGCAGCAACATCAGCTGCGATCGCAAAGATCAAGC------------------------------G---------------------GATGGCGAACTGGA---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGAGTCTCCGTTCAGCTGGTCGAGCAGTCTTCGAATCTTGAAAA-----AACCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTTAAAGAAA-ACATCGTTGTACGCCAAGGCAA-----------------------------------AGTGC----TAAT-AAATCGAGCAAAATGCGCTGCCTGGCAT-------------------------------------------------------------TGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................AGTCTCCGTTCAGCTGGTCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00330000000000000000
..................................................................................................................................................................................................................................................GTTCAGCTGGTCGAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00330000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-ACATCGTTGTACGCCAAGGCAA-----------------------------------AG........................................................................................................2612.00200200000000000000
...............................................................................................................................................................................................................................................TCCGTTCAGCTGGTCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00210100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-ACATCGTTGTACGCCAAGG................................................................................................................................................2312.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGCCAAGGCAA-----------------------------------AGTGC----TAAT-A...........................................................................................2411.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-ACATCGTTGTACGC.....................................................................................................................................................1811.00100100000000000000
.............................................................................................................................................................................................................................................TCTCCGTTCAGCTGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...........................................................................................................................................................................................................................................AGTCTCCGTTCAGCTGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
...................................................................................................................................................................................................................................................TTCAGCTGGTCGAGCAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
................................................................................................................................................................................................................................................CCGTTCAGCTGGTCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................................................................................................................................................................................GTCTCCGTTCAGCTGGTCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...............................................................................................................................................................................................................................................................................TGAAAA-----AACCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTTAAAG.......................................................................................................................................................................2111.00100010000000000000
............................................................................................................................................................................................................................................GTCTCCGTTCAGCTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-AAATCGAGCAAAATGCGC..........................................................................2011.00100000100000000000
.............................................................................................................................................................................................................................................TCTCCGTTCAGCTGGTCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAA-ACATCGTTGTACGC.....................................................................................................................................................2111.00110000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAAAGAAA-ACATCGTTGTACGC.....................................................................................................................................................2511.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAA-ACATCGTTGTACGCC....................................................................................................................................................1911.00100000010000000000
...............................................................................................................................................................................................................................................................................TGAAAA-----AACCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTTAAAGAA.....................................................................................................................................................................2311.00100000100000000000
.................................................................................................................................................................................................................................................CGTTCAGCTGGTCGAGCAGTCTTCGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
..............................................................................................................TGGA---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.............................................................................................................................................................................................................................................TCTCCGTTCAGCTGGTCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.........................................................................................................................................................................................................................................................................GAATCTTGAAAA-----AACCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------AT.............................................................................................................................................................................2111.00100000100000000000
....................................................................................................................................................................................................................................................TCAGCTGGTCGAGCAGTCTTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
..................................................................................................................................................................................................................................................GTTCAGCTGGTCGAGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25110000000000000000
droSec2
CAC--C-GGCGACAGCAGCAACATCAGCTGCGATCGCGAAGATCAAGC------------------------------G---------------------GATGGCGAACTGGA---------------------------------------------------GTCTCTC----------------GTCAGTCGCTTGC--------------------------------CGAGTCTCCGTTCAGCTGGTCGAGCAGTCTTCGAATCTTGAAAAA------CCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTTAAAGAAA-ACATCGTTGTACGCCAAGGCAA-----------------------------------AGTGC----TAAT-AAATCGAGCAAAATGCGCTGCCTGGCAT-------------------------------------------------------------TGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................AGTCTCCGTTCAGCTGGTCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTGTACGCCAAGGC...............................................................................................................................................1811.0010010
...................................................................................................................................................................................................................................................................................AAA------CCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------ATTTAAAGAAA-ACATC..............................................................................................................................................................2411.0010001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAA-ACATCGTTGTACG......................................................................................................................................................1811.0010010
...................................................................................................................................................................................................................................................TTCAGCTGGTCGAGCAGTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
......................................................................................................................................................................................................................................................AGCTGGTCGAGCAGTCTTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................................................................................................................................................................................................................................................TTCAGCTGGTCGAGCAGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
..................CAACATCAGCTGCGATCGCGAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
........................................................................................................................................................................................................................................................CTGGTCGAGCAGTCTTCGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-ACATCGTTGTACGCCAAGGC...............................................................................................................................................2311.0010010
...............................................................................................................................................................................................................................................TCCGTTCAGCTGGTCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................................................AGTCGCTTGC--------------------------------CGAGTCTCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
...............................................................................................................................................................................................................................................TCCGTTCAGCTGGTCGAGCAGTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
droYak3
CAG--C-AACAGCAATAATAACAACAACAACAAAAGCGGTAACA------------------------------ACAAC-----------------------------AAGAAGCCGTCACAGTTGCGCC-----------------------------------------------------------------------------------------------ATCGTTG-----------------------------CG------CATGCGCAGCGTATGAC--CAAGAGCACAGACAGTG----------------------------------------------------AAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGATGGCGAG-----------------------------------------------AGAGAG------------------------AGAGAGAG--A--------GAGAGTG-------------------AGAGA-GTGAGC------------GAGA-------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................GCACAGACAGTG----------------------------------------------------AAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA..................................................................................................................................................................................................................................1911.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAG--A--------GAGAGTG-------------------AGAGA-GTGAGC------------G......................................................................2611.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGAG-----------------------------------------------AGAGAG------------------------AGAGAGAG--..................................................................................................................................2311.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAG-----------------------------------------------AGAGAG------------------------AGAGAGAG--A--------GAGA.....................................................................................................................24200.05100010000000
droEre2
CAA--C-AGCAACAACAACAGCAACAGCAACAACAACAGCAATT---------------------------------------------------GTTT-------------------------------TTATG---GTAG-------------CA--GCGTT-----GGCGGCGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTCTGAAGCGGCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACAGCCAACAAACCAAAAAAAAAAAAAAA----------------------------------AAACAGAAAAATAAAA--AGAAAAAACAC-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.AA--C-AGCAACAACAACAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
......................AACAGCAACAACAACAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAA----------------------------------AAACA.............................................................................................................................19200.0511000000
..........AACAACAACAGCAACAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000
.............AACAACAGCAACAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510001000

Generated: 05/17/2015 at 03:53 AM