ID:

dvi_12417

 Coordinate:

scaffold_12963:17805118-17805294 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ17742-cds]; exon [dvir_GLEANR_2310:3]; CDS [Dvir\GJ17742-cds]; exon [dvir_GLEANR_2310:4]; intron [Dvir\GJ17742-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CACTTTGGCAAGATTGCCTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTTTTAGTTGAATTGATTACCGCCCAGTCGAAAGTTCGTTCGCATAATAAGTAGAAGCACTTATCTTATCGCTTATCGTGCTTGCGGGGCCATCCTCTCTTTGAACATTGGCCATTCAGTTGATCGCTGCACTCGCTCTTATCTTAATCGGACTTTATTTATTGTTGTTCCAGTTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGC
**************************************************((((((...((((..(((((...((((.....(((....)))...((((.(((((((((........)))....)))))).))))..))))(((((...((.....))....)))))...((((.....))))..............)))))..))))..))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 M061
embryo
 V047
embryo
 GSM1528803
follicle cells		 M027
male body		 SRR060659
Argentina_testes_total
 SRR060679
140x9_testes_total
 SRR060657
140_testes_total
 SRR060689
160x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060676
9xArg_ovaries_total
 SRR060678
9x140_testes_total
 SRR060688
160_ovaries_total
...............GCCTGGAAGAACCACAAGCACTCCGT............................................................................................................................................................................................................................................ 26 0 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCA.............. 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GATGAATACACCCTGGAGC............... 19 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAGATTGCCTGGAAGAACC......................................................................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................TTCCGCGATGAATACACCCTG................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............GCCTGGAAGAACCACAAGCACTCCGTCA.......................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................CTCGATGAATACACCCTGGAGCAGA............ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGCAG............. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAGATTGCCTGGAAGAACCA........................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......GGCAAGATTGCCTGGAAGAACC......................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAGAT........... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................CCGCGATGAATACACCCTGGA................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAGATTGCCTGGAAGAACCACAAGCA.................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ATACACCCTGGAGCAGATTATGA...... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTGAACATTGGCCATTCGGT....................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...........GATTGCCTGGAAGAACCACAAGCA.................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................GAATACACCCTGGAGCAGAT........... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................CCGCGATGAATACACCCTGGAGCA.............. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................CTGGAAGAACCACAAGCACTCC.............................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........CAAGATTGCCTGGAAGAACC......................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................ACAAGCACTCCGTCAATAATCCTTACC.............................................................................................................................................................................................................................. 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......GGCAAGATTGCCTGGAAGAACCACAAGCACTC............................................................................................................................................................................................................................................... 32 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
................CCTGGAAGAACCACAAGCACTCCGTC........................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................CTGGAAGAACCACAAGCACTCCGTC........................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CCTGGAAGAACCACAAGCACTC............................................................................................................................................................................................................................................... 22 0 2 1.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................AACCACAAGCACTCCGTCA.......................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........AAGATTGCCTGGAAGAACCACAA..................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.ACTTTGGCAAGATTGCCTGGAAGA............................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
....TTGGCAAGATTGCCTGGAAG............................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
CACTTTGGCAAGATTGCCTGGAA.............................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............TGCCTGGAAGAACCACAAG.................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................CGATGAATACACCCTGGAGCA.............. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGC............... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAGATC.......... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GAACCACAAGCACTCCGTCAATAAT..................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................AATACACCCTGGAGCAGATT.......... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................AGCAATTATCTTAGCGCTCATCGT................................................................................................................................................ 24 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................CTGGAGCAGATTGTGAAGTCG. 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................CTGGAAGAACCACAAGCACT................................................................................................................................................................................................................................................ 20 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................CTGGGGCAGATTATGAAGTCG. 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................TGGAGCAGATTATGAAGTCGC 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................................................TCCTTACTCGCAGTTCCGCGATG.............................. 23 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................CTGGAGCAGATTATGAAGTCGC 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................CTGGAGCAGATTATGAAGT... 19 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTTGAACATTGGCCGTTAA......................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GCAGGAGCAGATTATGTAGT... 20 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................GTTCGTTCGGATAATTGGT........................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GTGAAACCGTTCTAACGGACCTTCTTGGTGTTCGTGAGGCAGTTATTAGGCATTCAAAATCAACTTAACTAATGGCGGGTCAGCTTTCAAGCAAGCGTATTATTCATCTTCGTGAATAGAATAGCGAATAGCACGAACGCCCCGGTAGGAGAGAAACTTGTAACCGGTAAGTCAACTAGCGACGTGAGCGAGAATAGAATTAGCCTGAAATAAATAACAACAAGGTCAATGAGCGTCAAGGCGCTACTTATGTGGGACCTCGTCTAATACTTCAGCG
**************************************************((((((...((((..(((((...((((.....(((....)))...((((.(((((((((........)))....)))))).))))..))))(((((...((.....))....)))))...((((.....))))..............)))))..))))..))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060678
9x140_testes_total
 V053
head
 V047
embryo
 SRR060679
140x9_testes_total
 SRR060682
9x140_0-2h_embryos_total
 M047
female body
 SRR060676
9xArg_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 V116
male body		 SRR060666
160_males_carcasses_total
 M027
male body
.......................................................................................................................................................................................GTGAGGGAGAAGAGAATTCGCCT....................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCAAAATCAACTTAACTAATGGCGGGT..................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................................................GTCAAAAGCAACTTAACTAAT............................................................................................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TGAGGGAGAAGAGAATTCGCCT....................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TAGAATAGCGAGTAGCAG............................................................................................................................................... 18 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................CGCGACTAGCCCGAACGCCCCG..................................................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GCGTAAAGGCGCTACTTATGT........................ 21 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
..............................TTCTTGGGGCAGTTATTAGC................................................................................................................................................................................................................................... 20 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................TGAGCGTCGAGGCGCTACTTA........................... 21 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.................GACCTTCTTGGTGTTCGTGAG............................................................................................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
................GGACCTTCTTGGTGTTCGTGAG............................................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
................GGACCTTCTTGGTGTTCGTGA................................................................................................................................................................................................................................................ 21 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
........................TTGGTATTCATGAGGCAGGT......................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.......CGTTCGAAGGGACCTTATTG.......................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................GGTGATCGTGAGGCAGTTA........................................................................................................................................................................................................................................ 19 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TGCTATTTATGTGGGACGTC................ 20 3 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GAAACTTCTAACCGGTAAAAC........................................................................................................ 21 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................TAGCGACGCGCGCGACAAT.................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CCGGTAGGAGGGTAGCTT...................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:17805068-17805344 + dvi_12417 CACTTTGGCAAGATTGCCTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTTTTAG-----TTGAATTGATTACCGCCCAGTCGAAAGTTCGTTC---GCATAATAAGTAGAAGCACTTATCTTATC-------GCTTATCGTGC----TTGCGG-------------------------GGCCATCCTCTCTTTGAACAT---------------------TGGC-------------CA-TTCAG--------TT-GATCGCTGCACTCGCTCTT-A-TCT----TAATCGGACTT---TATT-T----ATTGT-T---GTTCCAGTTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGC
droMoj3 scaffold_6500:26540293-26540581 + CACTTCGGAAAGATTGCCTGGAAGAATCATAAGCATTCGGTTAATAATCCGTAAGTTCTAT-----ATGAATTGATTAACGCTCAGTCGAAAGTTCAATGCC---ATAATAGACGAAGGCGCTTATCTTATCTGGTATCGCTTA----------TCGTGG-------------------------GGCCATCCTCACACTGAACATTGGCCATCCATTT-----GATA-GACGAGTG-G--------TGCAG--------TC-AGT-------------CTT-A-TCT----TAATCTGTCGC---CT-CTCTCCTCCTGTT----GTTGTAGATACTCCCAGTTCCGCGATGAATACAGCCTGGAGCAGATTATGAAGTCGC
droGri2 scaffold_15252:5909654-5909910 + CACTTTGGCAAGATTGCTTGGAAGAACCACAAGCATTCTGTTAATAATCCGTAAGTTATAAGCAACGTAAATGTAACAAAGACCAGTCGAAAGTTCGTTC---GCATAAGA----GACACTCTTATCTAATC-------GCTTA-------------------------------------------TCGTTA------------------TTCCGCTGTACTTT---------GTAATCGC--CA-TAC---------------TCCACAT--GCT--CTT-C-TCT----TCATCTGAGGC--TTG-C-T----C---TTT---GTTCTAGGTACTCACAGTTCCGGGATGAATACACGCTGGAGCAGATTATGAAGTCGC
droWil2 scf2_1100000004521:10998888-10999160 + CATTTTGGTAAAATTGCATGGAAGAATCACAAACATTCAGTCAATAATCCGTAAGTA--------------------------CGGTCGAAAGTTCGCTCCTTG------------CCCCGCTTATCTTATC-------GCGGT------CCGACCACAGAGCACCAA---AACC-------ATA--TCATCA---TAATGATCATT---CATCCACTT-----CATTGCTT---------G--CACTGCAG--------TCCAACCCCAACACGCG---TCG--TTTGGC-TTATCTATGGACTTTTCT-C----A---TTG---TTTCTAGCTACTCCCAGTTCCGTGATGAATACACGCTGGAGCAGATTATGAAGTCGC
dp5 4_group3:4838062-4838226 + CACTTTGGAAAGATCGCCTGGAAGAACCACAAACACTCCGTCAATAATCCGTATGCA--------------------------CTCTCGGA---------------------------GCCTTTATTTTATA-------GCCT-------------------------------------------------------------------------------------------------------------------------------------C---TTG--TAT----TTATCTTT--------TT-A----A---TCTAATCTCGCAGCTACTCGCAGTTCCGCGATGAATACACTCTGGAGCAGATTATGAAGTCTC
droPer2 scaffold_1:6312578-6312828 - CACTTCGGCAAGATCGCCTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------CAGTCGAAAGTTCACTTGCCA-------------CCAGCTTATCTTATC-------GCCGA----------GAG----------------CC-------TCCGACCATCATC---------ATC---AGTCCACTC-----CATTGCCT---------G--CA-TTCAGTCGGGAGACC-GACCTATACACGCG---TTT--CTT----TTATCTGTCGG---ACTC-T----A---TTG---GTTCCAGCTACTCGCAGTTCCGCGATGAATACACTCTGGAGCAGATTATGAAGTCTC
droAna3 scaffold_12916:8293062-8293320 - CACTTTGGAAAAATTGCATGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCATCGCACA-----------CAAGGGCTTATCTTATC-------GCCGG----------GA------GAATAAGTAGATCA--AGC-GAAACCCACCA-------------------CGCAATC-----CGATCGCC--A---GT-GGCAA-CGTAG--------CT-CTTTCTGAAAGGCG---TGG--TTA----TTACATGGCTGTT-TTTT-T----T---TTT---GTTTCAGGTACTCCCAATTCCGAGATGAGTACACCCTGGAGCAGATTATGAAGTCGC
droBip1 scf7180000396728:21757-22010 + CATTTCGGAAAAATTGCGTGGAAGAACCACAAGCATTCCGTCAATAATCCGTAAGTT--------------------------CAGTCGAAAGTTCGTCGCGCA-----------CAAAGGCTTATCTTATC-------ATCGT----------GA------GAATAAGTAGATCA--AGC-AAATACCACCA-------------------CGCCATC-----CGATCGTT--G---TT-GAAAA-CTTAG--------CT-CTTCCG-AAAGGCG---TGG--TTG----TTAC--ATTTC---CGTT-T----C---TTG---GTTTCAGATACTCGCAATTCCGCGATGAGTATACCTTGGAGCAGATTATGAAGTCGC
droKik1 scf7180000302570:809935-810164 + CACTTTGGCAAGATCGCCTGGAAGAACCACAAGCACTCGGTCAATAATCCGTAAGTT-------------------------TCAGTCGAAAGTTCACCTCGCA-----------AGCGAGCTTATCTTATC-------GCTTG-------------------AATAAGCAGACTA--GGT-------TAC---------------------TCCACTC-----CCA-----------------TA-TGCAG--------CT-GATCCA-----------GC---TCT----TTATCTGTCTT---CGTT-T----C---TCTCTCCTGGCAGCTACTCGCAGTTCCGCGATGAGTACACTCTGGAGCAGATCATGAAGTCCC
droFic1 scf7180000454059:93745-94001 + CACTTTGGCAAAATCGCCTGGAAGAACCACAAACACTCGGTTAACAATCCGTAAGTT--------------------------AAGTCGAAAGTTCACCTCACT------------ATTCGCTTATCTTATC-------GCTCA----------AAACCGAGGAATAAGTAGACCA--ATCCATACACCATCA-------------------TCCACTC-----CAAA-GCT---------G--TA-TGCAG--------CT-GATCCACACACGCG---AAG--CTT----TTATCTATTTC---CATT-T----G---TTG---TTTTCAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGC
droEle1 scf7180000491046:4184499-4184757 + CACTTTGGCAAGATCGCCTGGAAGAACCACAAGCACTCGGTTAACAATCCGTAAGTA--------------------------CGGTCGAAAGTTCACCTCACT-----------CGATCGCTTATCTTATC-------GCTGG----------CAGCAGGGAAATAAGTAGACCA--AGCTATAGACCATCA-------------------TACTCTT-----TAAAGGCT---------G--TA-AGCAG--------CT-GATCCGCACATGCT---TTG--TTT----TTATCTGTTCT---CATT-T----A---TTG---CTTTTAGCTACTCGCAGTTCCGCGATGAGTACACTCTGGAGCAGATTATGAAGTCGC
droRho1 scf7180000764475:44937-45195 + CACTTCGGCAAGATCGCCTGGAAGAACCACAAGCACTCAGTTAACAATCCGTAAGTT--------------------------CGGTCGAAAGTTCACCTCAAC-----------CTTCCGCTTATCTTATC-------GCTGG----------CAACAGAGAAATAAGTAGACCA--AGCTATAGACCATCA-------------------TCCACTC-----CAATAGTT---------G--TA-TGCAG--------CT-GATCCACACACGCG---TTG--TTT----TTATCTGTTCT---CATT-T----G---TTG---ATTTCAGTTACTCGCAGTTCCGCGATGAGTACACCCTGGAGCAGATTATGAAGTCGC
droBia1 scf7180000302422:4838317-4838577 + CACTTCGGCAAAATCGCCTGGAAGAACCACAAGCACTCGGTTAATAATCCGTAAGTT--------------------------CAGTCGAAAGTTCGCTTTATT-----------CGTGCGCTTATCTTATC-------GCTCG----------AAGCAGAGAAATAAGTAGTCCATAGACCGTACACCATCA-------------------TCCACTC-----CAAGGGCT---------G--CA-TGCAG--------CT-GATCCACACACATG---TCG--TTT----TTATCGCTCCC---CATT-T----G---TTG---CTTCCAGCTACTCGCAGTTCCGCGATGAGTACACCCTGGAGCAGATTATGAAGTCGC
droTak1 scf7180000415385:80686-80928 + CATTTCGGCAAGATCGCCTGGAAGAACCACAAGCACTCGGTTAACAATCCGTAAGTT--------------------------CGGTCGAAAGTTCACCTCACT-----------CGTGCGGTTATCTTATC-------GCTCG----------CATCAGAGAAATAAGTAGACC-------GTAGACCATCA-------------------TCCACTC-----CAAGGGCT---------G--TA-TGCAG--------CT-GGT--------------------TTAATATTATCTTTACC---CATT-T----C---TTG---CTTTCAGCTACTCGCAGTTCCGCGATGAGTACACTCTGGAGCAGATTATGAAGTCGC
droEug1 scf7180000409463:1160342-1160582 - CATTTTGGCAAGATCGCCTGGAAGAACCACAAGCACTCCGTTAACAATCCGTAAGTT--------------------------CAGTCGAAAGTTCACCTCACT-------------TGTGCTTATCTTATC-------GC-----------------------ATAAGTAGAAC-------ATAGACCATCA-------------------TCCACTC-----CAAGGGCT---------G--TA-TGCAG--------CT-GATCCGCACACACT---ACGATTTT----TTATCTGTCGT---CACT-G----A---TTG---CTTTCAGCTACTCGCAATTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGC
dm3 chr2L:18829687-18829936 - CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGTGCTTATCTTATC-------GCTGA----------AAACAGAGAAATAAGTAGACC-------GTAGACCGTCA-------------------ACCACTC-----G---------GTA-TT-G--CA-TGCAG--------CT-GATCCTCATTCACG---CCA--C-T----TCATTTCTCTC---CAT--T----G---TTT---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGC
droSim2 2l:18387381-18387630 + dsi_11595 CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGTGCTTATCTTATC-------GCTGA----------AAACAGAGAAATAAGTAGACC-------GTAGACCATCA-------------------TCCACTT-----G---------GTA-TT-G--CA-TGCAG--------CT-GATCCTCACACACC---CCG--C-T----TTATCTGTATC---CAT--T----G---TTT---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGC
droSec2 scaffold_7:2458606-2458855 + CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGTGCTTATCTTATC-------GCTGA----------AAACAGAGAAACAAGTAGACC-------GTAGGCCATCA-------------------TCCACTT-----G---------GTA-TT-G--CA-TGCAG--------CT-GATCCTCACACACG---CCG--C-T----TTATCTGTCCC---CAT--T----G---TTT---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAAATTATGAAGTCGC
droYak3 2R:5344271-5344528 - CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGCGCTTATCTTATC-------GCTAA----------AAACCGAGAAATAAGTACACC-------ATTGACCATCA-------------------TCCACTC-----CTATGGCT--GTA-TT-G--CA-TTCAG--------CT-GATCCTCACACATG---TCG--C-T----TTATATGTTCC---CATT-T----G---TTG---CTTTTAGCTACTCGCAGTTCCGGGATGAATACACCCTGGAGCAGATTATGAAGTCGC
droEre2 scaffold_4845:5446850-5447107 + CACTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGCGCTTATCTTATC-------GCTAA----------AAGCAGAGAAATAAGTAGACC-------GTAGACCATCA-------------------TCCACTC-----CTATGGTC--GTA-TT-G--CA-TGCAG--------CT-GATCCTCACACATG---CCG--C-T----TTATCTGTTCC---CATT-T----G---TTG---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CACTTTGGCAAGATTGCCTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTTTTAG-----TTGAATTGATTACCGCCCAGTCGAAAGTTCGTTC---GCATAATAAGTAGAAGCACTTATCTTATC-------GCTTATCGTGC----TTGCGG-------------------------GGCCATCCTCTCTTTGAACAT---------------------TGGC-------------CA-TTCAG--------TT-GATCGCTGCACTCGCTCTT-A-TCT----TAATCGGACTT---TATT-T----ATTGT-T---GTTCCAGTTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............GCCTGGAAGAACCACAAGCACTCCGT......................................................................................................................................................................................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000003
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCA..............2012.002000000000000000000000000000000000000000000000000000000000000020
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGC...............1912.002000100000000000000000000000000000000000000000000000000000000010
.........AAGATTGCCTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................1912.002000000010000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................TTCCGCGATGAATACACCCTG...................2111.001001000000000000000000000000000000000000000000000000000000000000
...............GCCTGGAAGAACCACAAGCACTCCGTCA....................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGCAG.............2311.001000000000000000000000000000000000000000000000000000000000000010
.........AAGATTGCCTGGAAGAACCA..................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
......GGCAAGATTGCCTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAGAT...........2311.001000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................CCGCGATGAATACACCCTGGA.................2111.001001000000000000000000000000000000000000000000000000000000000000
.........AAGATTGCCTGGAAGAACCACAAGCA............................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................ATACACCCTGGAGCAGATTATGA......2311.001000100000000000000000000000000000000000000000000000000000000000
...........GATTGCCTGGAAGAACCACAAGCA............................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GAATACACCCTGGAGCAGAT...........2011.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................CCGCGATGAATACACCCTGGAGCA..............2411.001000000000000000000000000000000000000000100000000000000000000000
.................CTGGAAGAACCACAAGCACTCC........................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
........CAAGATTGCCTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
......GGCAAGATTGCCTGGAAGAACCACAAGCACTC.........................................................................................................................................................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000000100000
................CCTGGAAGAACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................CTGGAAGAACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................CCTGGAAGAACCACAAGCACTC.........................................................................................................................................................................................................................................................................................................................................................2221.002100100000000000000000000000000000000000000000000000000000000000
........................AACCACAAGCACTCCGTCA....................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.........AAGATTGCCTGGAAGAACCACAA...............................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
.ACTTTGGCAAGATTGCCTGGAAGA......................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
....TTGGCAAGATTGCCTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
CACTTTGGCAAGATTGCCTGGAA........................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
..............TGCCTGGAAGAACCACAAG..............................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................CGATGAATACACCCTGGAGCA..............2111.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGC...............2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAGATC..........2411.001000000000000000000000000000000000000000000000000000000000001000
.......................GAACCACAAGCACTCCGTCAATAAT...............................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AATACACCCTGGAGCAGATT..........2011.001000000000000000000000000000000000000000000000000000000000001000
.................CTGGAAGAACCACAAGCACT..........................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TGGAGCAGATTATGAAGTCGC2120.501000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CTGGAGCAGATTATGAAGTCGC2220.501000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CTGGAGCAGATTATGAAGT...1920.501000000010000000000000000000000000000000000000000000000000000000
droMoj3
CACTTCGGAAAGATTGCCTGGAAGAATCATAAGCATTCGGTTAATAATCCGTAAGTTCTAT-----ATGAATTGATTAACGCTCAGTCGAAAGTTCAATGCC---ATAATAGACGAAGGCGCTTATCTTATCTGGTATCGCTTA----------TCGTGG-------------------------GGCCATCCTCACACTGAACATTGGCCATCCATTT-----GATA-GACGAGTG-G--------TGCAG--------TC-AGT-------------CTT-A-TCT----TAATCTGTCGC---CT-CTCTCCTCCTGTT----GTTGTAGATACTCCCAGTTCCGCGATGAATACAGCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........AAAGATTGCCTGGAAGAATCATAAG..............................................................................................................................................................................................................................................................................................................................................................2511.001000001
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACAGCCTGGAG................1811.001100000
..................................................................................................................................................................................................................................................................................................................................................................ATACAGCCTGGAGCAGATT..........1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................ATGAATACAGCCTGGAGCAGA............2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACAGCCTGGAGC...............1911.001100000
........AAAGATTGCCTGGAAGAAT....................................................................................................................................................................................................................................................................................................................................................................1920.501100000
.....CGGAAAGATTGCCTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................1920.501100000
droGri2
CACTTTGGCAAGATTGCTTGGAAGAACCACAAGCATTCTGTTAATAATCCGTAAGTTATAAGCAACGTAAATGTAACAAAGACCAGTCGAAAGTTCGTTC---GCATAAGA----GACACTCTTATCTAATC-------GCTTA-------------------------------------------TCGTTA------------------TTCCGCTGTACTTT---------GTAATCGC--CA-TAC---------------TCCACAT--GCT--CTT-C-TCT----TCATCTGAGGC--TTG-C-T----C---TTT---GTTCTAGGTACTCACAGTTCCGGGATGAATACACGCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................ACAGTTCCGGGATGAATACA........................2012.00211
....................................................................................................................................................................................................................................................................................................................................................CAGTTCCGGGATGAATACACGCTGGA.................2611.00110
........................................................................................................................................................................................................................................................................................................CTGAGGC--TTG-C-T----C---TTT---GTTCT....................................................2111.00110
................................................................................................................................................................................................................................................................................................................................................CTCACAGTTCCGGGATGAATACACG......................2511.00110
................................................................................................................................................................................................................................................................................................................................................CTCACAGTTCCGGGATGAATACA........................2311.00101
.....................................................................................................................................................................................................................................................................................................................................................................CACGCTGGAGCAGATTATGAAGTC..2421.00211
...........GATTGCTTGGAAGAACCACAAGCAT...........................................................................................................................................................................................................................................................................................................................................................2511.00110
.............................................................................................................................................................................................................................................................................................................................................GTACTCACAGTTCCGGGAT...............................1911.00110
.......GCAAGATTGCTTGGAAGAACCA..................................................................................................................................................................................................................................................................................................................................................................2220.50101
....................................................................................................................................................................................................................................................................................................................................................................ACACGCTGGAGCAGATTATG.......2020.50101
........................................................................................................................................................................................................................................................................................................................................................................GCTGGAGCAGATTATGAAGTCG.2220.50110
.........AAGATTGCTTGGAAGAACCACAAG..............................................................................................................................................................................................................................................................................................................................................................2420.50101
....TTGGCAAGATTGCTTGGAAGAACCACA................................................................................................................................................................................................................................................................................................................................................................2720.50110
.........................................................................................................................................................................................................................................................................................................................................................................CTGGAGCAGATTATGAAGTCGC2220.50110
droWil2
CATTTTGGTAAAATTGCATGGAAGAATCACAAACATTCAGTCAATAATCCGTAAGTA--------------------------CGGTCGAAAGTTCGCTCCTTG------------CCCCGCTTATCTTATC-------GCGGT------CCGACCACAGAGCACCAA---AACC-------ATA--TCATCA---TAATGATCATT---CATCCACTT-----CATTGCTT---------G--CACTGCAG--------TCCAACCCCAACACGCG---TCG--TTTGGC-TTATCTATGGACTTTTCT-C----A---TTG---TTTCTAGCTACTCCCAGTTCCGTGATGAATACACGCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................AGAATCACAAACATTCAGTC.....................................................................................................................................................................................................................................................................................................................................................2011.00101000
..............TGCATGGAAGAATCACAAACATT..........................................................................................................................................................................................................................................................................................................................................................2311.00100001
................CATGGAAGAATCACAAACATTCAGTCA....................................................................................................................................................................................................................................................................................................................................................2711.00100100
....TTGGTAAAATTGCATGGAA........................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACGCTGGAGC...............1911.00100010
.......GTAAAATTGCATGGAAGA......................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACGCTGGAGCAG.............2111.00100100
.ATTTTGGTAAAATTGCATGGAAGA......................................................................................................................................................................................................................................................................................................................................................................2411.00100010
....TTGGTAAAATTGCATGGAAGAATCACA................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACGCTGGAGCA..............2011.00100100
.ATTTTGGTAAAATTGCATGGAAGAAT....................................................................................................................................................................................................................................................................................................................................................................2611.00100100
...TTTGGTAAAATTGCATGGAAG.......................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........AATTGCATGGAAGAATCACAAAC.............................................................................................................................................................................................................................................................................................................................................................2320.50100100
........................................................................................................................................................................................................................................................................................................................................................................GCTGGAGCAGATTATGAAGT...2020.50100100
................................................................................................................................................................................................................................................................................................................................................................GAATACACGCTGGAGCAGATTATGAAG....2720.50100100
.........AAAATTGCATGGAAGAATCA..................................................................................................................................................................................................................................................................................................................................................................2020.50100100
..................................................................................................................................................................................................................................................................................................................................................................ATACACGCTGGAGCAGATTATGAAGT...2620.50100100
.........AAAATTGCATGGAAGAATCACAAACA............................................................................................................................................................................................................................................................................................................................................................2620.50100100
.........AAAATTGCATGGAAGAAT....................................................................................................................................................................................................................................................................................................................................................................1820.50100010
................................................................................................................................................................................................................................................................................................................................................................GAATACACGCTGGAGCAGAT...........2020.50101000
dp5
CACTTTGGAAAGATCGCCTGGAAGAACCACAAACACTCCGTCAATAATCCGTATGCA--------------------------CTCTCGGA---------------------------GCCTTTATTTTATA-------GCCT-------------------------------------------------------------------------------------------------------------------------------------C---TTG--TAT----TTATCTTT--------TT-A----A---TCTAATCTCGCAGCTACTCGCAGTTCCGCGATGAATACACTCTGGAGCAGATTATGAAGTCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACTCTGGAGCAGATT..........2412.0020200000000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACTCTGGAGCAGATTATGA......2811.0010000001000
...TTTGGAAAGATCGCCTGGAA........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................TGAATACACTCTGGAGCAGAT...........2111.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACTCTGGA.................1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................ACACTCTGGAGCAGATTATGAAGTC..2511.0010000000010
....................GAAGAACCACAAACACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
....TTGGAAAGATCGCCTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
CACTTTGGAAAGATCGCCT............................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................................GAATACACTCTGGAGCAGATTATG.......2411.0010000100000
............................................................................................................................................................................................................................................................................................................................................................CGATGAATACACTCTGGA.................1811.0011000000000
..................................................................................................................................................................................................................................................................................................................................................................ATACACTCTGGAGCAGATTATGAAGT...2611.0010100000000
........AAAGATCGCCTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2011.0010000000001
........................................................................................................................................................................................................................................................................................................................................................TCCGCGATGAATACACTCTGGAGCAG.............2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACTCTGGAGCA..............2011.0010100000000
droPer2
CACTTCGGCAAGATCGCCTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------CAGTCGAAAGTTCACTTGCCA-------------CCAGCTTATCTTATC-------GCCGA----------GAG----------------CC-------TCCGACCATCATC---------ATC---AGTCCACTC-----CATTGCCT---------G--CA-TTCAGTCGGGAGACC-GACCTATACACGCG---TTT--CTT----TTATCTGTCGG---ACTC-T----A---TTG---GTTCCAGCTACTCGCAGTTCCGCGATGAATACACTCTGGAGCAGATTATGAAGTCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................ATGAATACACTCTGGAGC...............1840.753210000
......................................................................................................................................................................................................................................................................................................................................................GTTCCGCGATGAATACACTCTGGA.................2440.753300000
.........................................................................................................................................................................................................................................................................................................................................................CCGCGATGAATACACTCTGGA.................2140.753300000
.....................................................................................................................................................................................................................................................................................................................................................AGTTCCGCGATGAATACACTCTGGA.................2540.753300000
.....................................................AGTT--------------------------CAGTCGAAAGTTCACTTGCC........................................................................................................................................................................................................................................................................................2430.672200000
.........................................................................................................................................................................................................................................................................................................................................................CCGCGATGAATACACTCTGGAGC...............2340.502200000
.........AAGATCGCCTGGAAGAAC....................................................................................................................................................................................................................................................................................................................................................................1840.502200000
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACTCTGG..................1940.502200000
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACTCTGGAGCAGA............2540.502200000
...................................................................................................................................................................................................................................................................................................................CTC-T----A---TTG---GTTCCAGCTACTC............................................2130.331000010
......GGCAAGATCGCCTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2830.331100000
.....................................................................................................................................................................................................................................................A-TTCAGTCGGGAGACC-GA......................................................................................................................1830.331100000
..................................................................................................................................................................................................................................................................................................................................................CGCAGTTCCGCGATGAATACACTCTGGA.................2840.251100000
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACTCTGGA.................2040.251100000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACTCTGGAGCAGATT..........2440.251100000
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACTCTGGAGCAGAT...........2640.251100000
...................................................................................................................................................................................................................................................................................................................................................GCAGTTCCGCGATGAATACACTCTGGA.................2740.251100000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACTCTGGAGC...............1940.251100000
.....................................................................................................................................................................................................................................................................................................................................................AGTTCCGCGATGAATACACTCTGGAGCA..............2840.251100000
droAna3
CACTTTGGAAAAATTGCATGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCATCGCACA-----------CAAGGGCTTATCTTATC-------GCCGG----------GA------GAATAAGTAGATCA--AGC-GAAACCCACCA-------------------CGCAATC-----CGATCGCC--A---GT-GGCAA-CGTAG--------CT-CTTTCTGAAAGGCG---TGG--TTA----TTACATGGCTGTT-TTTT-T----T---TTT---GTTTCAGGTACTCCCAATTCCGAGATGAGTACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................GTACACCCTGGAGCAGATTATGAAGTC..2712.002100010
.................................CACTCCGTCAATAATCCGTA..........................................................................................................................................................................................................................................................................................................................................2012.002200000
................................................................................................................................................................................................................................................................................................................................................................GAGTACACCCTGGAGCAGA............1912.002000020
.....TGGAAAAATTGCATGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2311.001001000
............................................................................................................................................................................................................................................................................................................................T---TTT---GTTTCAGGTACTCCC..........................................1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................GTACACCCTGGAGCAGATTATGAAGT...2611.001001000
................................GCACTCCGTCAATAATCCGT...........................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................................................................................................................................................................................................................................................................................................................................GTACTCCCAATTCCGAGATGAG............................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................ACACCCTGGAGCAGATTATGAAGT...2411.001010000
.............................................................................................................................................................................................................................................................................................................................................GTACTCCCAATTCCGAGATGA.............................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................................AGTACACCCTGGAGCAGATTATGAAGTC..2811.001100000
...............GCATGGAAGAACCACAAGCACTC.........................................................................................................................................................................................................................................................................................................................................................2321.002100010
.................................................................................................................................................................................................................................................................................................................................................TCCCAATTCCGAGATGAGTACACCCTGG..................2811.001010000
.............................................................................................................................................................................................................................................................................................................................................GTACTCCCAATTCCGAGATGAGT...........................2311.001000010
...................................................................................................................................................................................................................................................................................................................................................................TACACCCTGGAGCAGATTATGAAGTC..2611.001010000
..................................................................................................................................................................................................................................................................................................................................................................GTACACCCTGGAGCAGATT..........1911.001010000
....................................................................................................................................................................................................................................................................................................................................................CAATTCCGAGATGAGTACACCCTGGAGC...............2811.001010000
.............................................................................................................................................................................................................................................................................................................................................................GATGAGTACACCCTGGAGCA..............2011.001000010
..............................................................................................................................................................................................................................................................................................................................................................ATGAGTACACCCTGGAGC...............1811.001010000
.........................................................................................................................................................................................................................................................................TTCTGAAAGGCG---TGG--TTA----T..........................................................................................1911.001010000
......GGAAAAATTGCATGGAAGAAC....................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..CTTTGGAAAAATTGCATGGAA........................................................................................................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................................................................................CTCCCAATTCCGAGATGAGTACAC.......................2411.001100000
.................ATGGAAGAACCACAAGCACTCC........................................................................................................................................................................................................................................................................................................................................................2220.501100000
........................................................................................................................................................................................................................................................................................................................................................................CCTGGAGCAGATTATGAAGTC..2120.501000001
....................GAAGAACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2220.501000010
............ATTGCATGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2220.501001000
...................GGAAGAACCACAAGCACTCC........................................................................................................................................................................................................................................................................................................................................................2020.501100000
...............GCATGGAAGAACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2720.501100000
.................ATGGAAGAACCACAAGCACTC.........................................................................................................................................................................................................................................................................................................................................................2120.501010000
...............GCATGGAAGAACCACAAGCACTCC........................................................................................................................................................................................................................................................................................................................................................2420.501010000
..............TGCATGGAAGAACCACAA...............................................................................................................................................................................................................................................................................................................................................................1820.501001000
.............TTGCATGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2120.501010000
................CATGGAAGAACCACAAGCACTCC........................................................................................................................................................................................................................................................................................................................................................2320.501010000
droBip1
CATTTCGGAAAAATTGCGTGGAAGAACCACAAGCATTCCGTCAATAATCCGTAAGTT--------------------------CAGTCGAAAGTTCGTCGCGCA-----------CAAAGGCTTATCTTATC-------ATCGT----------GA------GAATAAGTAGATCA--AGC-AAATACCACCA-------------------CGCCATC-----CGATCGTT--G---TT-GAAAA-CTTAG--------CT-CTTCCG-AAAGGCG---TGG--TTG----TTAC--ATTTC---CGTT-T----C---TTG---GTTTCAGATACTCGCAATTCCGCGATGAGTATACCTTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotal
No Reads
droKik1
CACTTTGGCAAGATCGCCTGGAAGAACCACAAGCACTCGGTCAATAATCCGTAAGTT-------------------------TCAGTCGAAAGTTCACCTCGCA-----------AGCGAGCTTATCTTATC-------GCTTG-------------------AATAAGCAGACTA--GGT-------TAC---------------------TCCACTC-----CCA-----------------TA-TGCAG--------CT-GATCCA-----------GC---TCT----TTATCTGTCTT---CGTT-T----C---TCTCTCCTGGCAGCTACTCGCAGTTCCGCGATGAGTACACTCTGGAGCAGATCATGAAGTCCCSizeHit CountTotal NormTotal
No Reads
droFic1
CACTTTGGCAAAATCGCCTGGAAGAACCACAAACACTCGGTTAACAATCCGTAAGTT--------------------------AAGTCGAAAGTTCACCTCACT------------ATTCGCTTATCTTATC-------GCTCA----------AAACCGAGGAATAAGTAGACCA--ATCCATACACCATCA-------------------TCCACTC-----CAAA-GCT---------G--TA-TGCAG--------CT-GATCCACACACGCG---AAG--CTT----TTATCTATTTC---CATT-T----G---TTG---TTTTCAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotal
No Reads
droEle1
CACTTTGGCAAGATCGCCTGGAAGAACCACAAGCACTCGGTTAACAATCCGTAAGTA--------------------------CGGTCGAAAGTTCACCTCACT-----------CGATCGCTTATCTTATC-------GCTGG----------CAGCAGGGAAATAAGTAGACCA--AGCTATAGACCATCA-------------------TACTCTT-----TAAAGGCT---------G--TA-AGCAG--------CT-GATCCGCACATGCT---TTG--TTT----TTATCTGTTCT---CATT-T----A---TTG---CTTTTAGCTACTCGCAGTTCCGCGATGAGTACACTCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotal
No Reads
droRho1
CACTTCGGCAAGATCGCCTGGAAGAACCACAAGCACTCAGTTAACAATCCGTAAGTT--------------------------CGGTCGAAAGTTCACCTCAAC-----------CTTCCGCTTATCTTATC-------GCTGG----------CAACAGAGAAATAAGTAGACCA--AGCTATAGACCATCA-------------------TCCACTC-----CAATAGTT---------G--TA-TGCAG--------CT-GATCCACACACGCG---TTG--TTT----TTATCTGTTCT---CATT-T----G---TTG---ATTTCAGTTACTCGCAGTTCCGCGATGAGTACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotal
No Reads
droBia1
CACTTCGGCAAAATCGCCTGGAAGAACCACAAGCACTCGGTTAATAATCCGTAAGTT--------------------------CAGTCGAAAGTTCGCTTTATT-----------CGTGCGCTTATCTTATC-------GCTCG----------AAGCAGAGAAATAAGTAGTCCATAGACCGTACACCATCA-------------------TCCACTC-----CAAGGGCT---------G--CA-TGCAG--------CT-GATCCACACACATG---TCG--TTT----TTATCGCTCCC---CATT-T----G---TTG---CTTCCAGCTACTCGCAGTTCCGCGATGAGTACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotal
No Reads
droTak1
CATTTCGGCAAGATCGCCTGGAAGAACCACAAGCACTCGGTTAACAATCCGTAAGTT--------------------------CGGTCGAAAGTTCACCTCACT-----------CGTGCGGTTATCTTATC-------GCTCG----------CATCAGAGAAATAAGTAGACC-------GTAGACCATCA-------------------TCCACTC-----CAAGGGCT---------G--TA-TGCAG--------CT-GGT--------------------TTAATATTATCTTTACC---CATT-T----C---TTG---CTTTCAGCTACTCGCAGTTCCGCGATGAGTACACTCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotal
No Reads
droEug1
CATTTTGGCAAGATCGCCTGGAAGAACCACAAGCACTCCGTTAACAATCCGTAAGTT--------------------------CAGTCGAAAGTTCACCTCACT-------------TGTGCTTATCTTATC-------GC-----------------------ATAAGTAGAAC-------ATAGACCATCA-------------------TCCACTC-----CAAGGGCT---------G--TA-TGCAG--------CT-GATCCGCACACACT---ACGATTTT----TTATCTGTCGT---CACT-G----A---TTG---CTTTCAGCTACTCGCAATTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotal
No Reads
dm3
CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGTGCTTATCTTATC-------GCTGA----------AAACAGAGAAATAAGTAGACC-------GTAGACCGTCA-------------------ACCACTC-----G---------GTA-TT-G--CA-TGCAG--------CT-GATCCTCATTCACG---CCA--C-T----TCATTTCTCTC---CAT--T----G---TTT---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................TACACCCTGGAGCAGATTATGAAGTC..2622.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATTTCGGCAAGATCGCTTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2722.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCGGCAAGATCGCTTGGAAGAACCACA................................................................................................................................................................................................................................................................................................................................................................2721.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TTGGAAGAACCACAAGCACTC.........................................................................................................................................................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....TCGGCAAGATCGCTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................CACCTTACG-----------CGTGTGCTTATCTTAT............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCTTGGAAGAACCACAAG..............................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................ATGAATACACCCTGGAGCAGA............2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000
........CAAGATCGCTTGGAAGAACCA..................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................AATCCGTAAGTT--------------------------TAGTCGA.....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................GAAGAACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2221.0020000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGGAAGAACCACAAGCACTCCGTCAA...................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAGA............2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
.......................................GTCAATAATCCGTAAGTT--------------------------T...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............GCTTGGAAGAACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TTCCGCGATGAATACACCCTGGAGCAGAT...........2921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAAGATCGCTTGGAAGAACCACAA...............................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AAGAACCACAAGCACTCCGTCA....................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TCCGCGATGAATACACCCTGGAGCAGA............2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TCCGCGATGAATACACCCTGGAGC...............2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................ACCCTGGAGCAGATTATGAA.....2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATACACCCTGGAGCAGATTATGA......2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................CCGCGATGAATACACCCTGGAGCAGA............2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGG..................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCGGCAAGATCGCTTGGAAGA......................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACCACAAGCACTCCGTCAAT..................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CGATGAATACACCCTGGAGC...............2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGATCGCTTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATACACCCTGGAGCAGATTATG.......2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.ATTTCGGCAAGATCGCTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCAGTTCCGCGATGAATACACCCTGGAG................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................GCACTCCGTCAATAATCC.............................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................TTGGAAGAACCACAAGCACT..........................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAACCACAAGCACTCCGTCAATAATCC.............................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTTCGGCAAGATCGCTTGG..........................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.........AAGATCGCTTGGAAGAACCACA................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................................................CCGCGATGAATACACCCTGGAGCAGAT...........2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CATTTCGGCAAGATCGCTTGGA.........................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................ATGAATACACCCTGGAGCAGATTAT........2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGCAGAT...........2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGCACTCCGTCAATAATCCC............................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACCACAAGCACTCCGTC.....................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........GATCGCTTGGAAGAACCACA................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATCGCTTGGAAGAACCAC.................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..TTTCGGCAAGATCGCTTGGAAGA......................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GATCGCTTGGAAGAACCA..................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AGCAGATTATGAAGTCGC1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATTTCGGCAAGATCGCTTGG..........................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAGATCGCTTGGAAGAACCACAAGCACT..........................................................................................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATTTCGGCAAGATCGCTTGGA.........................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAGATCGCTTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TACACCCTGGAGCAGATTATGAAGT...2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACCCTGGAGCA..............2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GAATACACCCTGGAGCAGAT...........2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GAATACACCCTGGAGCAGA............1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATACACCCTGGAGCAGAT...........1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........CAAGATCGCTTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATACACCCTGGAGCAGA............1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGAATACACCCTGGAGCAGG............2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............CGCTTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATCGCTTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAAGATCGCTTGGAAGAACCACA................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATCGCTTGGAAGAACCACAAG..............................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGCA..............2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGC...............2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....TCGGCAAGATCGCTTGGAAGAACCAC.................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAGCAGA............2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCAAGATCGCTTGGAAGAACCACA................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACCCTGGAGCAG.............2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GAATACACCCTGGAGCAG.............1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACCCTGGAG................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............GCTTGGAAGAACCACAAGCA............................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CACAAGCACTCCGTCAATAATC..............................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............TCGCTTGGAAGAACCACA................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCTTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACCACAAGCACTCCGTCAATA.................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................ACCACAAGCACTCCGTCA....................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGTGCTTATCTTATC-------GCTGA----------AAACAGAGAAATAAGTAGACC-------GTAGACCATCA-------------------TCCACTT-----G---------GTA-TT-G--CA-TGCAG--------CT-GATCCTCACACACC---CCG--C-T----TTATCTGTATC---CAT--T----G---TTT---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................AAGTAGACC-------GTAGACCATCA-------------------T..........................................................................................................................................................................2112.00200000000020000000
.................TTGGAAGAACCACAAGCACTT.........................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.......GCAAGATCGCTTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
CATTTCGGCAAGATCGCT.............................................................................................................................................................................................................................................................................................................................................................................1820.50100100000000000000
droSec2
CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGTGCTTATCTTATC-------GCTGA----------AAACAGAGAAACAAGTAGACC-------GTAGGCCATCA-------------------TCCACTT-----G---------GTA-TT-G--CA-TGCAG--------CT-GATCCTCACACACG---CCG--C-T----TTATCTGTCCC---CAT--T----G---TTT---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAAATTATGAAGTCGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............CGCTTGGAAGAACCACAAG..............................................................................................................................................................................................................................................................................................................................................................1921.0020020
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGC...............1921.0020011
.ATTTCGGCAAGATCGCTTG...........................................................................................................................................................................................................................................................................................................................................................................1920.5010010
......GGCAAGATCGCTTGGAAGAACC...................................................................................................................................................................................................................................................................................................................................................................2220.5010010
..........................................................................................................................................................................................................................................................................................................................................................CGCGATGAATACACCCTGGA.................2020.5010010
.....CGGCAAGATCGCTTGGAA........................................................................................................................................................................................................................................................................................................................................................................1820.5011000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCA..............2020.5010001
....................................................................................................................................................................................................................................................................................................................................................CAGTTCCGCGATGAATACACC......................2120.5011000
.......................................................................................................................................................................................................................................................................................................................................................TTCCGCGATGAATACACCCTGGAGC...............2520.5010010
................CTTGGAAGAACCACAAGCACT..........................................................................................................................................................................................................................................................................................................................................................2120.5010010
...TTCGGCAAGATCGCTTGGAAGA......................................................................................................................................................................................................................................................................................................................................................................2220.5010100
..............CGCTTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2020.5010010
..........AGATCGCTTGGAAGAACCACAAG..............................................................................................................................................................................................................................................................................................................................................................2320.5010010
CATTTCGGCAAGATCGCTTGG..........................................................................................................................................................................................................................................................................................................................................................................2120.5011000
...............................AGCACTCCGTCAATAATCCC............................................................................................................................................................................................................................................................................................................................................2020.5010100
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGAG................2020.5010010
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAA.............2120.5010100
droYak3
CATTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGCGCTTATCTTATC-------GCTAA----------AAACCGAGAAATAAGTACACC-------ATTGACCATCA-------------------TCCACTC-----CTATGGCT--GTA-TT-G--CA-TTCAG--------CT-GATCCTCACACATG---TCG--C-T----TTATATGTTCC---CATT-T----G---TTG---CTTTTAGCTACTCGCAGTTCCGGGATGAATACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................GGGATGAATACACCCTGGA.................1912.00202000000000
................................................................................................................................................................................................................................................................................................................................................CTCGCAGTTCCGGGATGAATACAC.......................2411.00101000000000
.ATTTCGGCAAGATCGCTTGGAAGAACCA..................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................CCGGGATGAATACACCCTGGAGC...............2311.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................CGGGATGAATACACCCTGGA.................2011.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................ATACACCCTGGAGCAGATTATGAAGT...2620.50100000010000
.....CGGCAAGATCGCTTGGAAGAACCACAAGC.............................................................................................................................................................................................................................................................................................................................................................2920.50110000000000
................CTTGGAAGAACCACAAGCACTCCGTCA....................................................................................................................................................................................................................................................................................................................................................2720.50101000000000
........CAAGATCGCTTGGAAGAACCACAAGCACC..........................................................................................................................................................................................................................................................................................................................................................2920.50100000010000
....................................................................................................................................................................................................................................................................................................................................................................ACACCCTGGAGCAGATTATG.......2020.50100000010000
..........AGATCGCTTGGAAGAACCACAAGCA............................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
....................GAAGAACCACAAGCACTCCGTCAAT..................................................................................................................................................................................................................................................................................................................................................2520.50100000010000
.....................................................................................................................................................................................................................................................................................................................................................................CACCCTGGAGCAGATTATGAAGT...2320.50100000010000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAG.............2120.50100000010000
.........................................................................................................................................................................................................................................................................................................................................................................CTGGAGCAGATTATGAAGT...1920.50101000000000
................................................................................................................................................................................................................................................................................................................................................................GAATACACCCTGGAGCAGATTATGAAGT...2820.50100000010000
droEre2
CACTTCGGCAAGATCGCTTGGAAGAACCACAAGCACTCCGTCAATAATCCGTAAGTT--------------------------TAGTCGAAAGTTCACCTTACG-----------CGTGCGCTTATCTTATC-------GCTAA----------AAGCAGAGAAATAAGTAGACC-------GTAGACCATCA-------------------TCCACTC-----CTATGGTC--GTA-TT-G--CA-TGCAG--------CT-GATCCTCACACATG---CCG--C-T----TTATCTGTTCC---CATT-T----G---TTG---CTTTTAGCTACTCGCAGTTCCGCGATGAATACACCCTGGAGCAGATTATGAAGTCGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................AGTTCCGCGATGAATACACCCTGG..................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAGA............2211.0010000100
................................................................................................................................................................................................................................................................................................................................................................GAATACACCCTGGAGCAGATTATGA......2511.0011000000
...........................................................................................................................................................................................................................................................................................................................................................GCGATGAATACACCCTGGA.................1911.0010001000
.........AAGATCGCTTGGAAGAACCACAAG..............................................................................................................................................................................................................................................................................................................................................................2421.0021000100
.....................................................................................................................................................................................................................................................................................................................................................................CACCCTGGAGCAGATTATGAA.....2111.0010000100
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGC...............1911.0010000010
.......................................................................................................................................................................................................................................................................................................................................................TTCCGCGATGAATACACCCTGG..................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................................GATGAATACACCCTGGAGCAG.............2111.0010100000
..................................................................................................................................................................................................................................................................................................................................................................ATACACCCTGGAGCAGATTATGAAGT...2611.0010000100
...........GATCGCTTGGAAGAACCACAAGCACTCCG.......................................................................................................................................................................................................................................................................................................................................................2920.5011000000
......GGCAAGATCGCTTGGAAGAAC....................................................................................................................................................................................................................................................................................................................................................................2120.5010000100
..........AGATCGCTTGGAAGAACCACAAGCA............................................................................................................................................................................................................................................................................................................................................................2520.5010000100
CACTTCGGCAAGATCGCTTGGA.........................................................................................................................................................................................................................................................................................................................................................................2220.5010000010

Generated: 05/17/2015 at 03:43 AM