ID:

dvi_12388

 Coordinate:

scaffold_12963:17611358-17611508 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.0 -21.9 -21.9 -21.8

Flybase annnotation

CDS [Dvir\GJ20062-cds]; exon [dvir_GLEANR_552:2]; intron [Dvir\GJ20062-in]

Repeatable elements

NameClassFamilyStrand
(CGG)nSimple_repeatSimple_repeat+
(CA)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAAATAATTATATTAATCAAAAGCCTCCCGTAAACGAGTGAGGTGTGTGCGTGTGTGTGCAGCGCCTATGTGCCAGTGTGTGTAAGTGCTTCTGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTCTGCGTGTGTGTGCGTGTGTGACTGGGACTAGAGCCAAAGAGTCGTCACAACGTCGTCCGCAAAACCTACGACATCAGCCGCTGCTGCTGCCGCCGCCGCCGCCTCCTCCTCCTCCTCCAAGATAAAA
******************************************************((.......(((((.((.(((((........((((.....(((...(((.(((........))).)))...))).....)))).......))))).))))).))......))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 V116
male body		 GSM1528803
follicle cells		 SRR060658
140_ovaries_total
 SRR060684
140x9_0-2h_embryos_total
 V047
embryo
 V053
head
 SRR060670
9_testes_total
 SRR060655
9x160_testes_total
 SRR060673
9_ovaries_total
 M027
male body		 M061
embryo
 SRR060669
160x9_females_carcasses_total
 SRR060678
9x140_testes_total
...............................................................................................................................................GACTGGGACTAGAGCCAAAGAGT..................................................................................... 23 0 1 8.00 8 1 3 1 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AGAGCCAAAGAGTCGTCACAA............................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................GTGTGCAGCGCCTATGTGCC................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TGTGTGTGCGTGCGTGCGTCTGCGTGT........................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................GTAAACGAGTGAGGTGTGTGC......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGCCGCTGCTGCTGCCGCCGCC.............................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGCCAAAGAGTCGTCACAACGTCGTC...................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATGTGCCAGTGTGTGTAAGTGC.................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTGCAGCGCCTATGTGCCAGTGTGT.......................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTGTAAGTGCTTCTGTGTGTGTGTGT.................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................TGTGCCAGTGTGTGTAAGTGC.................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................CGTGTGTGACTGGGACTAGAGC............................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................GAGTCGTCACAACGTCGTCC..................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................GACTAGAGCCAAAGAGTCGT.................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACGACATCAGCCGCTGCTGCTGCCGCC................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGCGCCTGCGTGTGTGTGCGT................................................................................................................ 21 1 5 0.60 3 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0
........................................................................................................................................................................................................GCCGCTGCTGCTGCCGCCGCCGCCGCC........................ 27 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................ATGTGCCAGTGTGTGTAAGTG................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................TTGAGGGTGTGACTGGGACTA................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TGCCAGTGTGGGTAACTGGTT................................................................................................................................................................ 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TGCCAGTGTGGGTAGCTGCTT................................................................................................................................................................ 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................TGGCAGTGTGTGTAGGTGGTT................................................................................................................................................................ 21 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTCTGCCGCCGCCTCTTCCTCCTCC............ 25 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................CTGTACAGCGCCTACGTGC.................................................................................................................................................................................. 19 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTACGTGTGTGTCTGGGACT.................................................................................................. 20 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................TGCTTCTGTGTGTGTTTGTG................................................................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................AACGTCTTCCGCAAAGCCA............................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................ATCAGCCGCTGCCGCTGCCCC.................................. 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCTGCTGCTGCCGCCGCCGCC........................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GGGTCTGCGTGTGTGTGC.................................................................................................................. 18 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

ATTTATTAATATAATTAGTTTTCGGAGGGCATTTGCTCACTCCACACACGCACACACACGTCGCGGATACACGGTCACACACATTCACGAAGACACACACACACACACACACGCACGCACGCAGACGCACACACACGCACACACTGACCCTGATCTCGGTTTCTCAGCAGTGTTGCAGCAGGCGTTTTGGATGCTGTAGTCGGCGACGACGACGGCGGCGGCGGCGGAGGAGGAGGAGGAGGTTCTATTTT
*************************************************************************************((.......(((((.((.(((((........((((.....(((...(((.(((........))).)))...))).....)))).......))))).))))).))......))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 M047
female body
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060678
9x140_testes_total
 SRR060669
160x9_females_carcasses_total
 GSM1528803
follicle cells		 M061
embryo
 SRR060659
Argentina_testes_total
 V053
head
 V047
embryo
 SRR060682
9x140_0-2h_embryos_total
 SRR1106720
embryo_8-10h
 SRR1106730
embryo_16-30h
.....................................................................................................................................................TGGATCTCGATTTCTCAGCAG................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGGCGGCGGCGGCGGAGGAGGAGG............... 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CGGCGACGACGACGGCGGCGGCGGCG......................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CACCAGGCGATTTGGATTC......................................................... 19 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGGCGGCGGTGGCGGAGGAGGAGG............... 24 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGGCGGCGGCGGAGGAGG.................. 18 0 12 0.17 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GCGGCGGCGGCGGAGGAGGAG................ 21 0 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGGCGGCGGAGGAGGAGGA.............. 19 0 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGGCGGCGGCGGCGGAGGA.................... 19 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GGCGGCGGAGGAGGAGGAG............. 19 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AGAGGAGGAGGAGGAGGTT....... 19 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GCGGCGGAGGAGGAGGAGG............ 19 0 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................CATCTACTCACTCGACACAC.......................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CGGCGGCGGAGGAGGAGG............... 18 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGGCGCCGGCGGAGGAGG.................. 18 1 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................CGGCGGCGGAGGCGGAGGAGG............ 21 1 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CGGCGGAGGAGGAGGAGG............ 18 0 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................CGGCGGCGGAGGCGGAGGAGG.................. 21 1 15 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................TTGCAGCAGGGGATTTGTA............................................................ 19 3 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GGCGACGACGACGGCGGCG............................... 19 0 19 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................ACACACACACACACGCACGCAC................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................................................CGGCGGCGCAGGAGGA................. 16 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................CGGCGACGACGACGGCGGC................................ 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TGTTGGAGCATGAGTTTTG.............................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................CGGAGGCGGCGGAGGAGG.................. 18 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:17611308-17611558 - dvi_12388 TAAA-------------------TAATTATATT----AATC-AAAAGCCTCCCGTAAACGAGTGA--G--G-TGTGTGCGTG-----------TGTGTGCA-------------------GCGCCT------------------------------------------ATGT------------GCCAGTGTGTGTAAGTGCTTCTGTGTGTGTGTGT----------------------------------------GT--------GTGTGCGTGCGTGCG-----------TCTGCGTGTGTGTGCGTGTGTGACTG-------------G--GACT---------------------------------------------------------------------AGAGCCAAAGAGTCGTCACA-ACGT----CGTCCGCAAAACCTACG------------------------ACAT---------------CAGCCGCTGCTGCTGCCGCCGCCGCC----GCCTCC---TC-----CTCCTCCTCC--------------------------------------------------AAGATA----AAA------------------
droMoj3 scaffold_6500:22653345-22653581 - AAAA-------------------AAA--AAATT----AAAGAAAAAGACACCCTT----TTGTGACGGGTG-TGTG--CGTG-----------TGT------------------------------------------------------------------------ATGT------------GCAAGTGTGTG--------------------------------------TAGGTGCT------------------CGAGTGCGTGTGCG-----------------------------------------TGAGGA---GCTGCAGCCGTCGTCGT--CGTTGCTG--TC-------GTCCTCGTC--------------------CTG------ACTGGAGCCCCGAGCCAAAGAGGCGTCACA-ACGTCGT-CGTCAGCAAAACCCACG------------------------ACAT---------------CAGCCGCTGCTGCCGCCGCCGCCGCC----GCCGTGT-----------------CC--------------------------------------------------AAGGTA----AAA------------------
droGri2 scaffold_15252:15035541-15035767 - GTCA-------------------TAATTATAATAATTATACAAGA--------------AGGTGA--G--G-TGTGTGCGTG-----------TGTGTGTG------------------TGTGC--TTGT----------------------------------------ATGC----------GTCAGTGTGTG--------------------------------------TAAGTGCTT--------------GTGCGCGTGTGTGTGCGTGAGT----G---------------------------TGTGTGAGAG-------------G--GGCT---------------------------------------------------------------------AAAGCCAAAGAATCGTCACA-ACGT----CGTCCGCAAAACCAACG------------------------ACAT---------------CAGCCGCTGCTGCTGCCGCCGCCGCC----GCTGCTGCCGC------------AAC--------------------------------------------------AAGAAC----AAC-----AGCAACAACG---
droWil2 scf2_1100000004909:7045467-7045680 + AT---------------------------------------------------------GGGTTG--G--C-TATGTTAGTG-----------TCTGTCTG--------------------------TCTCTCTGTATGCGTGTAAGTGC--ATCTATATCTAT--------------------------G------------------------------------------TTAGTATCT----------------GTGTGTGT--GTGTGTGTGTGTGTG-------------------------TGTGTATGCCTG-------------G--GTCT----------------------------------------------------------------------GGGCTGCAGTGGCAT-GCA-TTGCCCTCTGTCTGCATTG---CCG------------------------ACGC---------------CTGCAACAACTGCAACAACTGTCGA------GTGCCGA--CTACTGCCCTACATTC--------------------------------------------------AAGGCA----ACG------------------
dp5 XR_group3a:1106915-1107157 + GT-----------------------------------------------------------------GTGG-TGTGTGCGTT-----------TGTGTGTG------------------TGTG----TGTGT--------------------------------------GTGTGTGT----------------------------------------------------------GTGTGT----------------GTGTGTGT--GTGTGTGTG----TG---------------------------TGTGTGTGTG-------------T--GTGT--GGATGCTT--TGCTAAATGCTTTTTGTACACAAAAAAAGTACGATTACTTGTGAAATATTTGTATTCCAAACCTATGATGATT--TTTCCTT----TGC---CAACAACCTCG------------------------GCCT---------------CGGTTGCTGACGCCGCCGCCACCG-------------------------------C--------------------------------------------------CGGCTCGAGCGGGGAGTCGCCTCCAAAGTGA
droPer2 scaffold_80:30141-30354 + AG---------------------------------------------------------GTGTGTGTG------------TG-----------TGGGCGTG------------------TGTGT--GTGT----------------------------------------GTGCGATTGTTGGA------GAGT------GCAC------------------------------TAGTGTGT----------------GCGTGTGT--GTGTGTGTGTGTGTG-----------TG--------------TGTGTGTGTGGCAAATG------C--GGCC-------------------------------------------------------------------------------GGTAGTCGCA-TCGT----CGCATCT--GGCTAACGCCGCCATAAAACGCAACGCATTCAATGTGGCAAGCGCAACAATGAGCTGCTGTTGCTGTCGATGCTCCT----GCT------GC------------TGC--------------------------------------------------C------------------------------
droAna3 scaffold_13340:2142040-2142281 + AACA-------------------GC--AACACT----GGCC-CAAAGCTGTC------------------G-----------------------------------------------------------A--TGCGCGCGTGTGAGTGGAAGCCTGTGTCCGTGTTC--GTGACGGTGTGCGT------G--------------------------------------------TGTGTG-TGTGTGTG---AGAGAGTGTCAGTGTGTGCGAGTGTT----TT--GTA--------------------TCTGTGTGTG-------------A--GTGC----------------------------------------------------------------------GAGTCA--------------------------------------C------------------------ATAT---------------CAGCAGCAGCAGCAGTAGCAGCGGCA----GT---AGAAGC------------GGCACCATTCGAAGAAGTTCAGTGGAAAAGGCGCTCAGCCTAGCCATCCTAGCAGGAAA-------------------------
droBip1 scf7180000396030:26109-26251 - TC--------------------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGTGTGTGGGTGTAGGTGAGTGGGTG-------------TATG----------TGTGCCTGCG-------------T--GTCC----------------------------------------------------------------------TG-TTCTTTTGTTACAACA-AT-T----TTTGCGCAATTTCTTTT------------------------GTGC---------------TTTGTGCAGCCGCCGCCGACGCTTCCATTTTCCATT---GC------------CGC--------------------------------------------------TG--TC----ATA------------------
droKik1 scf7180000302570:370937-371183 + TAAATGCGAATTTCGGAGTGAAACAAGTGCA-A------------AGTCAACAAC----TTGTGGGAGTCCAAGCGCTATTGAGTTTCGAGTCCTTGAGTTCTTGGATCCC-TTGCCCGT----------------------------------------------------------------------GTC---------------------------------------C-------------------------GCGTCCGCGT--C------CGTGCCCC--GTGTGTTAGTG--------T-TGCGCGTAAGTG-------------A--GTCC----------------------------------------------------------------------GGACTCCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACCT---------------CAACTGCCGCCGCTGCCGCCGCCGCT----GCTGCTGCTGC------------TGC--------------------------------------------------AGGATC----GGG------------------
droFic1 scf7180000453883:76501-76750 - A-----------------------------------------------------C----TTGTGGGAGTCA-AGAGCTCGAG---CTCGAGTCCTCCAGTCCCCGAATCC---TGCCGGTGTGT--GTGT----------------------------------------TTGGTGGTGTTGGT------GTGC------GCGG----------TTGTGTGTGTGCGTTCGTTC-----------GTGTGCAAAGTGTT------------------------CC--GAGTGCTACTG----------AGTGTGTGAGTG-------------C--GTCC-------------------------------------GAATACC--------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCTGCTGCCGCCGCC----GCCGCCGCTGC------------TGC--------------------------------------------------AGGATC----AGG------------------
droEle1 scf7180000491186:406499-406718 + A-----------------------------------------------------C----TTGTGGGAGTCG-AGTGCTCGTC--------GTCCTCGAGTCCTTGAGTCC---TGCCAGT-------------------------------------------------------GGTGGTGGT------GTG---------------------------------------CCAAGTGTATTAAGTGTGCAAAGTGTGC------------------------CAGG----------------------TGTGCTAGTG-------------C--GTCCGTGGATACCAGATACCAGATACCAGATA-------ACGGATAAC--------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCATAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCTGCTGCT----GCT--------------------------------------------------------------------------------------------------------
droRho1 scf7180000780132:25267-25461 + A-----------------------------------------------------C----TTGTGGGAGTCG-AGTGCTCGTC-----------CTCGAGTCCTTGAGTCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CCAAGTGTGTTAGGTGTGCAAAGTGTAC---------------AAAGTGTGCCAG------------------------GTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCCGCTGCT----GCTGTC---GC------------TGC--------------------------------------------------AGGATC----GGG------------------
droBia1 scf7180000302422:7649972-7650172 - AA---------------------CCAGTGCAAA------------AGTCAACAGC----TTGTGGGAGTCG-AGAGCTCGTC---CTCGAGTCCCCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------TTAAGTGCATTAAGTGTGCCAAGTGTGCG--------------------AG---------------------------TGTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCTGCTGCT----GCTGCC-----------------------------------------------------------------------------------------------------
droTak1 scf7180000415115:122307-122510 - TA------------------------------G------------AGTCAACAAC----TTGTGGGAGTCG-AGTGCTCGTC---CTCGAGTCCTTGCATCCTTGAATCCTACTGCCGGT----------------------------------------------------------------------GTGT----------------------TG--------------TTAAGTGCATTAAGTGACCCA---GAGCGTC-----------------------------------------------CGTGTGAGTG-------------C--GTCC-------------------------------------GGATAAC------------------GGA------GCTACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACTGCCGCCGCCGCCGCTGCTGCT----GCTGCC-----------------------------------------------------------------------------------------------------
droEug1 scf7180000409767:858665-858885 - AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGTGCTCGTC---CTCGAGTCCTTCAGTCCTTGAATCC---TGTCAGT----------------------------------------------------------------------GTG---------------------------------------TTAAGTGCATTAAGTGTGCCAAGTGTGCGTGTG---------------------------------------------CGTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCTGC------------TGC--------------------------------------------------AGGATC----AGG------------------
dm3 chr2L:20432014-20432235 + AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGTTCGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGCCAAGTGTGCGTCTGCGTGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCCGC------------TGC---------------------------------------------------------------------------------
droSim2 2l:19896100-19896327 + AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGCTCGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGCCAAGTGTGCGTCTGCGTGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCCGC------------TGC--------------------------------------------------AGGATC-------------------------
droSec2 scaffold_18:319364-319591 + AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGCTCGTC-----------CTCGAGTCCTTAAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CCCAGTGCTTTAAGTGTGCCAAGTGTGCGTCTGCGTGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCCGC------------TGC--------------------------------------------------AGGATC-------------------------
droYak3 2R:6796949-6797154 + AAAA-------------------CAAGTCGAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGTTTGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGCCCAGTGTGCGTCTGCGTGTGCGTG------AG---------------------------CCTGTGACTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCCGCTGCT----GCT--------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:4000040-4000238 - T---------------------------GCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGTTCGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GAG---------------------------------------CTCAGTGCTTTAGGTGTGCCCAGTGTGCGT-------------------------------------------------CTGTGACTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCCGCTGCT----GCTGCC---GC------------TGC--------------------------------------------------AGGATC----GGG------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TAAA-------------------TAATTATATT----AATC-AAAAGCCTCCCGTAAACGAGTGA--G--G-TGTGTGCGTG-----------TGTGTGCA-------------------GCGCCT------------------------------------------ATGT------------GCCAGTGTGTGTAAGTGCTTCTGTGTGTGTGTGT----------------------------------------GT--------GTGTGCGTGCGTGCG-----------TCTGCGTGTGTGTGCGTGTGTGACTG-------------G--GACT---------------------------------------------------------------------AGAGCCAAAGAGTCGTCACA-ACGT----CGTCCGCAAAACCTACG------------------------ACAT---------------CAGCCGCTGCTGCTGCCGCCGCCGCC----GCCTCC---TC-----CTCCTCCTCC--------------------------------------------------AAGATA----AAA------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................GACTG-------------G--GACT---------------------------------------------------------------------AGAGCCAAAGAGT.....................................................................................................................................................................................................................2318.008001000000000030000000020000001000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCCAAAGAGTCGTCACA-A............................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................GTGTGCA-------------------GCGCCT------------------------------------------ATGT------------GCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................T----------------------------------------GT--------GTGTGCGTGCGTGCG-----------TCTGCGTGT............................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
.....................................................GTAAACGAGTGA--G--G-TGTGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCTGCTGCTGCCGCCGCC..................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAAGAGTCGTCACA-ACGT----CGTC.................................................................................................................................................................................................2611.001000000000001000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ATGT------------GCCAGTGTGTGTAAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000001000000000000000000000000000000000000000000000000000
................................................................................................GTGCA-------------------GCGCCT------------------------------------------ATGT------------GCCAGTGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................GTGTAAGTGCTTCTGTGTGTGTGTGT----------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................TGT------------GCCAGTGTGTGTAAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................CGTGTGTGACTG-------------G--GACT---------------------------------------------------------------------AGAGC.............................................................................................................................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGTCACA-ACGT----CGTCC................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GACT---------------------------------------------------------------------AGAGCCAAAGAGTCGT..................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACG------------------------ACAT---------------CAGCCGCTGCTGCTGCCGCC.....................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTGCTGCTGCCGCCGCCGCC----GCC........................................................................................................2720.501000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................ATGT------------GCCAGTGTGTGTAAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGCTGCCGCCGCCGCC----...........................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAAA-------------------AAA--AAATT----AAAGAAAAAGACACCCTT----TTGTGACGGGTG-TGTG--CGTG-----------TGT------------------------------------------------------------------------ATGT------------GCAAGTGTGTG--------------------------------------TAGGTGCT------------------CGAGTGCGTGTGCG-----------------------------------------TGAGGA---GCTGCAGCCGTCGTCGT--CGTTGCTG--TC-------GTCCTCGTC--------------------CTG------ACTGGAGCCCCGAGCCAAAGAGGCGTCACA-ACGTCGT-CGTCAGCAAAACCCACG------------------------ACAT---------------CAGCCGCTGCTGCCGCCGCCGCCGCC----GCCGTGT-----------------CC--------------------------------------------------AAGGTA----AAA------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCAAAACCCACG------------------------ACAT---------------CAGC.....................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................................................GCAGCCGTCGTCGT--CGTT.................................................................................................................................................................................................................................................................................................1811.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAACCCACG------------------------ACAT---------------CAGCCGCT.................................................................................................................................2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGGCGTCACA-ACGTC........................................................................................................................................................................................................1911.001000001
.........................................................................................................................................................................................................................................................................CGTGTGCG-----------------------------------------TGAGGA---GCTGCAGCC...............................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTGCTGCCGCCGCCGCC..................................................................................................................21110.091000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGCCGCCGCCGCCGCC----...........................................................................................................21200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTGCTGCCGCCGCC.....................................................................................................................18200.051000100
droGri2
GTCA-------------------TAATTATAATAATTATACAAGA--------------AGGTGA--G--G-TGTGTGCGTG-----------TGTGTGTG------------------TGTGC--TTGT----------------------------------------ATGC----------GTCAGTGTGTG--------------------------------------TAAGTGCTT--------------GTGCGCGTGTGTGTGCGTGAGT----G---------------------------TGTGTGAGAG-------------G--GGCT---------------------------------------------------------------------AAAGCCAAAGAATCGTCACA-ACGT----CGTCCGCAAAACCAACG------------------------ACAT---------------CAGCCGCTGCTGCTGCCGCCGCCGCC----GCTGCTGCCGC------------AAC--------------------------------------------------AAGAAC----AAC-----AGCAACAACG---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................GTG-----------TGTGTGTG------------------TGTGC--TTGT----------------------------------------ATGC----------GTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATCGTCACA-ACGT----CGTCCGCA.............................................................................................................................................................................................2511.00110
droWil2
AT---------------------------------------------------------GGGTTG--G--C-TATGTTAGTG-----------TCTGTCTG--------------------------TCTCTCTGTATGCGTGTAAGTGC--ATCTATATCTAT--------------------------G------------------------------------------TTAGTATCT----------------GTGTGTGT--GTGTGTGTGTGTGTG-------------------------TGTGTATGCCTG-------------G--GTCT----------------------------------------------------------------------GGGCTGCAGTGGCAT-GCA-TTGCCCTCTGTCTGCATTG---CCG------------------------ACGC---------------CTGCAACAACTGCAACAACTGTCGA------GTGCCGA--CTACTGCCCTACATTC--------------------------------------------------AAGGCA----ACG------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
GT-----------------------------------------------------------------GTGG-TGTGTGCGTT-----------TGTGTGTG------------------TGTG----TGTGT--------------------------------------GTGTGTGT----------------------------------------------------------GTGTGT----------------GTGTGTGT--GTGTGTGTG----TG---------------------------TGTGTGTGTG-------------T--GTGT--GGATGCTT--TGCTAAATGCTTTTTGTACACAAAAAAAGTACGATTACTTGTGAAATATTTGTATTCCAAACCTATGATGATT--TTTCCTT----TGC---CAACAACCTCG------------------------GCCT---------------CGGTTGCTGACGCCGCCGCCACCG-------------------------------C--------------------------------------------------CGGCTCGAGCGGGGAGTCGCCTCCAAAGTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG------------------------GCCT---------------CGGTTGCTGACGCC...........................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................AATATTTGTATTCCAAACCTA..........................................................................................................................................................................................................................2111.0010100000000
...............................................................................................TGTGTG------------------TGTG----TGTGT--------------------------------------GTGTGTGT----------------------------------------------------------GT.............................................................................................................................................................................................................................................................................................................................................................................................................25200.2550000050000
........................................................................TGTGTGCGTT-----------TGTGTGTG------------------TGTG----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.1010000001000
...................................................................................................TG------------------TGTG----TGTGT--------------------------------------GTGTGTGT----------------------------------------------------------GTGTGT----------------G........................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
...............................................................................................................................................................................................................................................................................TGTGTG----TG---------------------------TGTGTGTGTG-------------T--GTGT--GG...................................................................................................................................................................................................................................................................................................25200.0510001000000
.......................................................................................................................................................................................................................................................................................................................GTGTGTGTG-------------T--GTGT--GGAT.................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
AG---------------------------------------------------------GTGTGTGTG------------TG-----------TGGGCGTG------------------TGTGT--GTGT----------------------------------------GTGCGATTGTTGGA------GAGT------GCAC------------------------------TAGTGTGT----------------GCGTGTGT--GTGTGTGTGTGTGTG-----------TG--------------TGTGTGTGTGGCAAATG------C--GGCC-------------------------------------------------------------------------------GGTAGTCGCA-TCGT----CGCATCT--GGCTAACGCCGCCATAAAACGCAACGCATTCAATGTGGCAAGCGCAACAATGAGCTGCTGTTGCTGTCGATGCTCCT----GCT------GC------------TGC--------------------------------------------------C------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................GTGTGT----------------GCGTGTGT--GTGTGTG........................................................................................................................................................................................................................................................................................................................................................................21200.204000004
.................................................................................................CGTG------------------TGTGT--GTGT----------------------------------------GTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000001
...................................................................................................................................................................................................................................................................CGTGTGT--GTGTGTGTGTGTGTG-----------T....................................................................................................................................................................................................................................................................................................................................................23200.051000001
................................................................................................GCGTG------------------TGTGT--GTGT----------------------------------------GTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
..................................................................................................................................................................................................................................................................GCGTGTGT--GTGTGTGTGTGTGTG-----------TG--------------TGTGT................................................................................................................................................................................................................................................................................................................................30200.051000001
droAna3
AACA-------------------GC--AACACT----GGCC-CAAAGCTGTC------------------G-----------------------------------------------------------A--TGCGCGCGTGTGAGTGGAAGCCTGTGTCCGTGTTC--GTGACGGTGTGCGT------G--------------------------------------------TGTGTG-TGTGTGTG---AGAGAGTGTCAGTGTGTGCGAGTGTT----TT--GTA--------------------TCTGTGTGTG-------------A--GTGC----------------------------------------------------------------------GAGTCA--------------------------------------C------------------------ATAT---------------CAGCAGCAGCAGCAGTAGCAGCGGCA----GT---AGAAGC------------GGCACCATTCGAAGAAGTTCAGTGGAAAAGGCGCTCAGCCTAGCCATCCTAGCAGGAAA-------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGTAGCA.....................................................................................................................20200.153020001
..............................................................................................................................................................................................................................................GTG-TGTGTGTG---AGAGAGTGT.....................................................................................................................................................................................................................................................................................................................................................................................20130.081100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGTAGC......................................................................................................................19200.051000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGTAGCAGC...................................................................................................................20200.051010000
droBip1
TC--------------------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGTGTGTGGGTGTAGGTGAGTGGGTG-------------TATG----------TGTGCCTGCG-------------T--GTCC----------------------------------------------------------------------TG-TTCTTTTGTTACAACA-AT-T----TTTGCGCAATTTCTTTT------------------------GTGC---------------TTTGTGCAGCCGCCGCCGACGCTTCCATTTTCCATT---GC------------CGC--------------------------------------------------TG--TC----ATA------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TAAATGCGAATTTCGGAGTGAAACAAGTGCA-A------------AGTCAACAAC----TTGTGGGAGTCCAAGCGCTATTGAGTTTCGAGTCCTTGAGTTCTTGGATCCC-TTGCCCGT----------------------------------------------------------------------GTC---------------------------------------C-------------------------GCGTCCGCGT--C------CGTGCCCC--GTGTGTTAGTG--------T-TGCGCGTAAGTG-------------A--GTCC----------------------------------------------------------------------GGACTCCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACCT---------------CAACTGCCGCCGCTGCCGCCGCCGCT----GCTGCTGCTGC------------TGC--------------------------------------------------AGGATC----GGG------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A-----------------------------------------------------C----TTGTGGGAGTCA-AGAGCTCGAG---CTCGAGTCCTCCAGTCCCCGAATCC---TGCCGGTGTGT--GTGT----------------------------------------TTGGTGGTGTTGGT------GTGC------GCGG----------TTGTGTGTGTGCGTTCGTTC-----------GTGTGCAAAGTGTT------------------------CC--GAGTGCTACTG----------AGTGTGTGAGTG-------------C--GTCC-------------------------------------GAATACC--------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCTGCTGCCGCCGCC----GCCGCCGCTGC------------TGC--------------------------------------------------AGGATC----AGG------------------SizeHit CountTotal NormTotal
No Reads
droEle1
A-----------------------------------------------------C----TTGTGGGAGTCG-AGTGCTCGTC--------GTCCTCGAGTCCTTGAGTCC---TGCCAGT-------------------------------------------------------GGTGGTGGT------GTG---------------------------------------CCAAGTGTATTAAGTGTGCAAAGTGTGC------------------------CAGG----------------------TGTGCTAGTG-------------C--GTCCGTGGATACCAGATACCAGATACCAGATA-------ACGGATAAC--------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCATAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCTGCTGCT----GCT--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
A-----------------------------------------------------C----TTGTGGGAGTCG-AGTGCTCGTC-----------CTCGAGTCCTTGAGTCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CCAAGTGTGTTAGGTGTGCAAAGTGTAC---------------AAAGTGTGCCAG------------------------GTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCCGCTGCT----GCTGTC---GC------------TGC--------------------------------------------------AGGATC----GGG------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AA---------------------CCAGTGCAAA------------AGTCAACAGC----TTGTGGGAGTCG-AGAGCTCGTC---CTCGAGTCCCCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------TTAAGTGCATTAAGTGTGCCAAGTGTGCG--------------------AG---------------------------TGTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCTGCTGCT----GCTGCC-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TA------------------------------G------------AGTCAACAAC----TTGTGGGAGTCG-AGTGCTCGTC---CTCGAGTCCTTGCATCCTTGAATCCTACTGCCGGT----------------------------------------------------------------------GTGT----------------------TG--------------TTAAGTGCATTAAGTGACCCA---GAGCGTC-----------------------------------------------CGTGTGAGTG-------------C--GTCC-------------------------------------GGATAAC------------------GGA------GCTACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACTGCCGCCGCCGCCGCTGCTGCT----GCTGCC-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGTGCTCGTC---CTCGAGTCCTTCAGTCCTTGAATCC---TGTCAGT----------------------------------------------------------------------GTG---------------------------------------TTAAGTGCATTAAGTGTGCCAAGTGTGCGTGTG---------------------------------------------CGTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGATACCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CGACTGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCTGC------------TGC--------------------------------------------------AGGATC----AGG------------------SizeHit CountTotal NormTotal
No Reads
dm3
AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGTTCGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGCCAAGTGTGCGTCTGCGTGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCCGC------------TGC---------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................AGTCG-AGCGTTCGTC-----------CTCGAGTCCTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGT..................................................................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TGTGGGAGTCG-AGCGTTCGTC-----------CTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000
............................................................................................................................................................................................................................................................AAGTGTGCGTCTGCGTGTGC...........................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TGCCAAGTGTGCGTCTGCGTGTGCGTG........................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000
...............................................................................................................................................................................................................................................CTTTAAGTGTGCCAAGTGTGCGTC....................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG------------------------ACGT---------------CCACAGCCGC...............................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGCGTGTGCGTGAGCGTGAG---------------------------CCTGT................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................AAA------------AGTCAACAAC----TTGTGGGAGTCG-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................GTG---------------------------------------CTCAGTGCTTTAAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------G................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000
...................................................................................................................CCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGC................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..................................................................................................................................................................................................................................................TAAGTGTGCCAAGTGTGCGTCTGCGT...............................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
..............................................................................................TCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CT.................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--...........................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................CCAGTGCAAA------------AGTCAACAAC----TTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
.......................................................................................................................T----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGCCAAG............................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...........................................................................................................................................................................................................................................................................TGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--...........................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCACA-ACGT----CGTCCAC..............................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGCTTTAAGTGTGCCAAGTGTGCGTC....................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000
.........................................................................................................................................................................................................................................................................................AG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGG........................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..............................................................................................................................................................................................................................................................................................................................TG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAA....................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGCAAA------------AGTCAACAAC----TTGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----C....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGCGTCTGCGTGTGCGTGAGCGTGA.................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTTAAGTGTGCCAAGTGTGCGTCTGCG................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................TGTGCGTCTGCGTGTGCGT.........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................GAGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------.................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGT---------------CCACAGCCGCCGCCG..........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGA.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................AC----TTGTGGGAGTCG-AGCGTTCGTC-----------CT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGT.....................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGCCGCCGCCGCCGCTGC...................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAGTGCAAA------------AGTCAACAAC----................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGC..................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GTGGGAGTCG-AGCGTTCGTC-----------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................AGTCAACAAC----TTGTGGGAGTCG-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................A------------AGTCAACAAC----TTGTGGGAGTCG-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GCCAAGTGTGCGTCTGCGTGTGCGTG........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTAAGTGTGCCAAGTGTGCGTCTGC.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................................................................................................................................................................TGTGCGTGAGCGTGAG---------------------------CCTGTGAGT............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACA-ACGT----CGTCCACAAAACCATC.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAG......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGCCACA-ACGT----CGTCCACAAAACC........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TGCCAAGTGTGCGTCTGCGTGTGC...........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTTAAGTGTGCCAAGTGTGCGTCTG..................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGC..........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GTGCGTCTGCGTGTGCGTGA.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................G---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGC..........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGTGCCAAGTGTGCGTCTGCGT...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................CCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-.............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACA-ACGT----CGTCCACAAAACC........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................AAGTGTGCCAAGTGTGCGTCTGCGTG..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCACAAAACCATCG------------------------ACGT---------------CCAC.....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AGTCG-AGCGTTCGTC-----------CTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................AGTGCTTTAAGTGTGCCAAGTGTGCGTC....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCACA-ACGT----CGTCCACAAAACCA.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................CGTC-----------CTCGAGTCCTTGAATCC---TGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAGCGGAGAAGCCACA-ACGT----CGTCC................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAGAAGCCACA-ACGT----CGTCCAC..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCGGAGAAGCCACA-AGT..........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGTGCGTCTGCGTGTGCGTGA.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................AGTGTGCCAAGTGTGCGTCTGCGT...............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GTGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--...........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................TGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCG.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CACA-ACGT----CGTCCACAAAACCA.......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AAGTGTGCGTCTGCGTGTG............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGA.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACAAC----TTGTGGGAGTCG-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................AAGTGTGCCAAGTGTGCGT.....................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GTGTGCGTGAGCGTGAG---------------------------CC...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................TCGTC-----------CTCGAGTCCTTGAATCC---TGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................CC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGTGCCAAGTGTGCGTCTGCGTGTGC...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................TGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAG...................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TCAGTGCTTTAAGTGTGCCAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAAGTGTGCGTCTGCGTGTGCGTG........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................TCAACAAC----TTGTGGGAGTCG-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GAGTCG-AGCGTTCGTC-----------CTCGAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAA------------AGTCAACAAC----TTGTGGGAGTCG-AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGCTTTAAGTGTGCCAAGTGTGCG......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................GTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCG.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GTGTGCCAAGTGTGCGTCT...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAG......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................................GTCAACAAC----TTGTGGGAGTCG-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CA-ACGT----CGTCCACAAAACC........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................GTTCGTC-----------CTCGAGTCCTTGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTG............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCCACA-ACGT----CGTCCACAAAA..........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGT.............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................CTCGAGTCCTTGAATCC---TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAACCATCG------------------------ACGT---------------CCACAGCC.................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................AATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCA...............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TAAGTGTGCCAAGTGTGCGTCTGCG................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................TCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGT.............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................CCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGT..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGTGCAAA------------AGTCAACAAC----TTGTGGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGTGTGCCAAGTGTGCGTCT...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................GAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCC.................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACAAC----TTGTGGGAGTCG-AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GTGTGCGTGAGCGTGAG---------------------------CCTGTGA..............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGCGTCTGCGTGTGCGTGAGCGTG..................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................GTGCTTTAAGTGTGCCAAGTGTGCGTC....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................GCCAAGTGTGCGTCTGCGTGT.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAACCATCG------------------------ACGT---------------CCAC.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
......................................................C----TTGTGGGAGTCG-AGCGTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGG..................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGG........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................................AGTGTGCGTCTGCGTGTC............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................GT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................GCAAA------------AGTCAACAAC----TTGTGGGAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................TAAGTGTGCCAAGTGTGCGTCTGCGTG..............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................G---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGA.....................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AGTCG-AGCGTTCGTC-----------CTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AA--------------------ACCAGTGCAAA------------AGTCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CT.................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GTCAACAAC----TTGTGGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCGCCGCTGCTGCT----GCTGCC.....................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
droSim2
AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGCTCGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGCCAAGTGTGCGTCTGCGTGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCCGC------------TGC--------------------------------------------------AGGATC-------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................CGTC-----------CTCGAGTCCTTGAATCC---TGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.00605100000000000000
.............................................AGTCAACAAC----TTGTGGGAGTCG-AGCGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200020000000000000
............................GCAAA------------AGTCAACAAC----TTGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
......................................................................G-AGCGCTCGTC-----------CTCGAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
..............................................GTCAACAAC----TTGTGGGAGTCG-AGCGCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
...................................................................GTCG-AGCGCTCGTC-----------CTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..........................GTGCAAA------------AGTCAACAAC----TTGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...........................................................................................................................................................................................................................................................................TGTGCGTGAGCGTGAG---------------------------CCTGTGA..............................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------ACGT---------------CCACAGCCGCCGC............................................................................................................................1811.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCACAAAACCATCG------------------------AC..........................................................................................................................................................1911.00101000000000000000
.............................................................................TCGTC-----------CTCGAGTCCTTGAATCC---TGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
..............................................................................CGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...........................................................TTGTGGGAGTCG-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15120.17200000000002000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT----GCTGCCGCCGC------------TGC--------------------------------------------------...............................16200.05100000010000000000
droSec2
AA--------------------ACCAGTGCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGCTCGTC-----------CTCGAGTCCTTAAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CCCAGTGCTTTAAGTGTGCCAAGTGTGCGTCTGCGTGTGCGTGAGCGTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCTGCTGCT----GCTGCCGCCGC------------TGC--------------------------------------------------AGGATC-------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................GTCAACAAC----TTGTGGGAGTCG-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACA-ACGT----CGTCCACAAAACCATC.....................................................................................................................................................................................2611.0010100
......................................................................................................................................................................................................................................................................................GTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTA............................................................................................................................................................................................................................2511.0010010
......................................................................................................................................................................................................................................................................................GTGAG---------------------------CCTGTGAGTG-------------C--GTCC----------------------------------------------------------------------GGGTAGC..........................................................................................................................................................................................................................2711.0010100
.........................................................................................................................................................................................................................................................GCCAAGTGTGCGTCTGCGTGT.............................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..............................................GTCAACAAC----TTGTGGGAGTCG-AG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCG------------------------ACGT---------------CCACAGCCGCC..............................................................................................................................2011.0010010
..................................................................................................................................................................................................................................................................................GAGCGTGAG---------------------------CCTGTGAGT............................................................................................................................................................................................................................................................................................................................1811.0010001
droYak3
AAAA-------------------CAAGTCGAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGTTTGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GTG---------------------------------------CTCAGTGCTTTAAGTGTGCCCAGTGTGCGTCTGCGTGTGCGTG------AG---------------------------CCTGTGACTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCCGCTGCT----GCT--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................GAAA------------AGTCAACAAC----TTGTGGGAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.......................CAAGTCGAAA------------AGTCAACAAC----TTGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..........................................................................................................................................................................................................................................................................GTGTGCGTG------AG---------------------------CCTGTGACTG-------------C--GTCC----------------------------------------------------------------------.................................................................................................................................................................................................................................2611.00100000010000
...........................................................................................................................................................................................................................................................................................................................GACTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAG......................................................................................................................................................................................................................2111.00100000010000
...............................AA------------AGTCAACAAC----TTGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................CC----------------------------------------------------------------------GGGTAGCGGAGAAGCCAC...............................................................................................................................................................................................................2011.00100000010000
..............................AAA------------AGTCAACAAC----TTGTGGGAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..............................................GTCAACAAC----TTGTGGGAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
......................................................................................................................................................................................................................................................................CTGCGTGTGCGTG------AG---------------------------CCTGT................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................GCGTG------AG---------------------------CCTGTGACTG-------------C--GT.........................................................................................................................................................................................................................................................................................................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCGGAGAAGCCACA-AC...........................................................................................................................................................................................................1911.00100100000000
droEre2
T---------------------------GCAAA------------AGTCAACAAC----TTGTGGGAGTCG-AGCGTTCGTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------GAG---------------------------------------CTCAGTGCTTTAGGTGTGCCCAGTGTGCGT-------------------------------------------------CTGTGACTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----CGTCCACAAAACCATCG------------------------ACGT---------------CCACAGCCGCCGCCGCCGCCGCTGCT----GCTGCC---GC------------TGC--------------------------------------------------AGGATC----GGG------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................GACTG-------------C--GTCC----------------------------------------------------------------------GGGTAGCGGAGA.....................................................................................................................................................................................................................2212.0020000110
.............................................................................................................................................................................................................................................................AGTGTGCGT-------------------------------------------------CTGTGACTG-------------C--...........................................................................................................................................................................................................................................................................................................1912.0020000020
.....................................................................................................................AGT----------------------------------------------------------------------GAG---------------------------------------CTCAGTGCTTTAGGTGTGCCC..............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
......................................................................G-AGCGTTCGTC-----------CTCGAGTCCTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..............................................GTCAACAAC----TTGTGGGAGTCG-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
....................................................................................................................................................................................................................................................................GT-------------------------------------------------CTGTGACTG-------------C--GTCC----------------------------------------------------------------------GGGTAGC..........................................................................................................................................................................................................................2311.0010100000
..................................................................................................................GCCAGT----------------------------------------------------------------------GAG---------------------------------------CTCAGTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...................................................CAAC----TTGTGGGAGTCG-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
......................................................................................................................GT----------------------------------------------------------------------GAG---------------------------------------CTCAGTGCTTTAGGTGTGCC...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACA-ACGT----CGTCCACAAAACC........................................................................................................................................................................................2411.0010000010
.....................................................................................................................AGT----------------------------------------------------------------------GAG---------------------------------------CTCAGTGCTTTAGGTGT..................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
............................................................................................................CC---TGCCAGT----------------------------------------------------------------------GAG---------------------------------------CTCAGTG............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................................................................................................CTTTAGGTGTGCCCAGTGTGCGT-------------------------------------------------....................................................................................................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................................GAG---------------------------------------CTCAGTGCTTTAGGTGTGCCCAGTG..........................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.....................................................................................................CTTGAATCC---TGCCAGT----------------------------------------------------------------------GAG---------------------------------------CTC................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................CTTGAATCC---TGCCAGT----------------------------------------------------------------------GAG---------------------------------------CTCAGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
................................................................................................................................................................................................G---------------------------------------CTCAGTGCTTTAGGTGTGCC...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..................................................................................................................................................................................................................................................................................................................................................CC----------------------------------------------------------------------GGGTAGCGGAGAAGCCACA-ACGT----.....................................................................................................................................................................................................2511.0010000100
..............................................GTCAACAAC----TTGTGGGAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..............................AAA------------AGTCAACAAC----TTGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
......................................................................................................................................................................................................................................................TGTGCCCAGTGTGCGT-------------------------------------------------CTGT................................................................................................................................................................................................................................................................................................................................2011.0010000100
....................................................AAC----TTGTGGGAGTCG-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...............................................................................GTC-----------CTCGAGTCCTTGAATCC---TGCCAGT----------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCATCG------------------------ACGT---------------CCACAGCCGC...............................................................................................................................2411.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCACA-ACGT----CGTCCACAAAACCATC.....................................................................................................................................................................................2811.0010000100

Generated: 05/16/2015 at 11:39 PM