ID:

dvi_12353

 Coordinate:

scaffold_12963:17347721-17347871 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.9 -19.7 -19.5

Flybase annnotation

CDS [Dvir\GJ17715-cds]; exon [dvir_GLEANR_2286:2]; intron [Dvir\GJ17715-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTTAAGCTATACTTACATTTACTCCCTTTATGTGCTGCTCCTTCGTTCGAAATGAATGTGAAGCAAAATCTACCACACTATAACTGTTAATCAATGTAGTCTATGCTTTTATTAACTCTCTTTATATAGGCTATTCCATCCACAACTATAACTGTTAACATTTACTCATGCTCTTCACGTTCTCTCTTTGTCGTTGCAGTGCATTTGGTATGAGCGATAAGAGCAGCAGCGCTACCAACAGCCTACCGA
**************************************************.....((((((((((((((((.....(((.((((..(((........((((((((((...................)))))))))).......)))..))))..)))....)))).....))))..)))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060663
160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 M047
female body
 SRR060678
9x140_testes_total
 SRR060670
9_testes_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060673
9_ovaries_total
 SRR060675
140x9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR060688
160_ovaries_total
 SRR060683
160_testes_total
 SRR060659
Argentina_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060689
160x9_testes_total
 V116
male body		 V047
embryo
 SRR060655
9x160_testes_total
 M028
head
.....................................................................................................................................................................................TTCTCTCTTTGTCGTTGCAG.................................................. 20 0 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTTGGTATGAGCGATAAGAGC......................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................AATCAATGTAGTCTATGCCTT............................................................................................................................................ 21 1 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCGATAAGAGCAGCAGC................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTAC.............. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCATAAGAGCAGCAGCGCTA............... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGTATGAGCGATAAGAGC......................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAGCGATAAGAGCAGCAG.................... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................ATTTGGTATGAGCGATCAGA........................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GATGCATTTGGTATGAGCGATAAGAGC......................... 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ATGAGCGATAAGAGCAGCAG.................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTTGGTATGAGCGATAAGAGCAGCAGCG.................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CAGCAGCGCTACCAACAGCC...... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGAGTGCATTTGGTATGAGCGATAAGA........................... 27 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTACCAAC.......... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................ATAAGAGCAGCAGCGCTACCAACAGC....... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGCAGCAGCGCTACCAACAGCCTACC.. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................ATGAGCGATAAGAGCAGCAGC................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGCGATAAGAGCAGCAGCGCTACCAACA......... 28 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTA............... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTTGGTATGAGCGATAAGAGCAGC...................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TATGAGCGATAAGAGCAGCAGCGCT................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCATTTGGTATGAGCGATAAGAGC......................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTTGGTATGAGCGATAAGAGCAGC...................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGCAGCGCTACCAACGGCCTAC... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGCATTTGGTATGAGCGATA.............................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GAGCAGCAGCGCTACCAACAGCCT..... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTTGGTATGAGCGATAAG............................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AGAGCAGCAGCGCTACCAACAGCC...... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................AAGAGCAGCAGCGCTACCAACAGC....... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTGCATTTGGTATGAGCGATAAGAGCAG....................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCGATAAGAGCAGCAGCG.................. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GCATTTGGTATGAGCGATAAGA........................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTGGTATGAGCGATAAGA........................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTACCAACAG........ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GCAGCGCTACCAACAGCCTA.... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTTGGTATGAGCGATAAGA........................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AGCAGCGCTACCAACAGCCTA.... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TGCTTTTACTAACTCTCTAT.............................................................................................................................. 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................TACTCTACGCTTTTGTTAACTC................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................GTACTCTACGCTTTTGTTAACT.................................................................................................................................... 22 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................ATTCAATGTAGTCTTTGCATT............................................................................................................................................ 21 3 10 0.20 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2
....................................................................................ACTGTTAATTAATGAAGTCCA.................................................................................................................................................. 21 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AGAGGAGCCGCCCTACCAA........... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAAAATTCGATATGAATGTAAATGAGGGAAATACACGACGAGGAAGCAAGCTTTACTTACACTTCGTTTTAGATGGTGTGATATTGACAATTAGTTACATCAGATACGAAAATAATTGAGAGAAATATATCCGATAAGGTAGGTGTTGATATTGACAATTGTAAATGAGTACGAGAAGTGCAAGAGAGAAACAGCAACGTCACGTAAACCATACTCGCTATTCTCGTCGTCGCGATGGTTGTCGGATGGCT
**************************************************.....((((((((((((((((.....(((.((((..(((........((((((((((...................)))))))))).......)))..))))..)))....)))).....))))..)))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 V116
male body		 SRR060667
160_females_carcasses_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060678
9x140_testes_total
 M047
female body
 SRR060665
9_females_carcasses_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060654
160x9_ovaries_total
 SRR060672
9x160_females_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
......................................................................................................................................................................GAGTACGAGACGTTCAAGAGAA............................................................... 22 3 2 1.50 3 2 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AAGAGTACGAGACGTTCAAGAGA................................................................ 23 3 2 1.50 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AGAGTACGAGACGTTCAAGAGA................................................................ 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................CGACGTGGAAGCCAGCTTTA.................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GAGTACGAGACGTTCAAGAG................................................................. 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CTATTCTCGTGGACGCAATG.............. 20 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTATAAGGTGGGTGTGGATAT................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................TAAGGTGGGTGTGGATAT................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................ATAAGGTGGGTGTGGATA.................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................TAAAAGAATTGAGAGAAATAT........................................................................................................................... 21 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................TCGTCGTCGAGATGGTTGC......... 19 2 13 0.08 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................TCGTTTACGATCGTGTGATA........................................................................................................................................................................ 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................ACGAGGAAGCATGGGTTAC................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................TGAGTAGGAGAATTGGAAG................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.................GTAAAAGAGGGAAATACT........................................................................................................................................................................................................................ 18 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CGTCGTCGAGATGGTTGC......... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................TCGTAAATGAGTTCGAGAG.......................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
............................................................................................................AAACTAAGTGAGAGAGATAT........................................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGGGTAGGTGGTGATATC.................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:17347671-17347921 + dvi_12353 TTTTTAA---GCT-----------ATAC-TTACA--TTTACTCCCTTTATGTGCTGCTCCTTCGTTCGA-----------AATGAATGTGAAGCAAAATCTACCA-------------CA------------------CTA----TAA--CTGTTAA---TCAATG------------------------------------------------------------------------------------------------------------------------TAGTCTATGCTTTTATTAACTCTCTTTATATAGGCTAT--TCCATCCACAACTA--------------------------------------------------------------------------------TAACTGTT--AACATTTACTCA-----------------TGCTCT--------------------------T---CACGTTCTCTC---TTTGTCGTTGCAGTGCATTTGGTATGAGCGATAAGAGCAGCAGCGCTACCAACAGCCTACCGA------------------------
droMoj3 scaffold_6500:22396351-22396512 + ACTGTA-------AAA--CAATTCC--------T--TC--------TTATGCCCTGCGC--AAA----------------------------------------------------------AGGCAAAC----TGTT--A----TAA--CTG------------TA--A-----TTTTACTCATTTTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATTCTCATTCTCTC-------------------------TCTCTCT------CT---TTGTCTTTTACAGTGCATTTGGTATGAGCGATAAGAGCAGCAGCGCCACCAATAGTCTACCGA------------------------
droGri2 scaffold_15252:14781101-14781314 + ATAATAA---GCT-----------TGAG-CTCCA--TTTTGTACTTTTACGCAT-GCTCTAAAA----------------------------------------------------------AA----ATAAAATGCA-----AATAA--CTGTTTG---CTAATG------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------GCT---------TTAGCTCCATTTTGAATATGCTCATGTT------------------GTACAGAA--TTTTTTCTGTTCAAGCTTTTACTAA-----------------TTC-------------------------------TCTCT--A---TT----CTCTCTTTGCAGTGCATTTGGTATGAGCGATAAGAGCAGCAGCGCCACAAACAGCCTGCCAA------------------------
droWil2 scf2_1100000004521:9964031-9964120 + TAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------AATACTATTTATAT-------------------------------------T--CC-T---TTTCT---GTCTCTTTCTCAGTGCATTTGGAATGAGCGATAAGAGCAGCAGTGCAACCAACAGCCTTCCGA------------------------
dp5 4_group3:5856392-5856622 - GGTTTGG----TT--------------------------AC---AGCGGTGACTCATCA-------AG------------G----------------------------------------TAG----AACCA--A--CTA----AGA--ATA-TAG---AGTAGAAGAGATTTGTTTTACTTTTTATTAAGTAATATTCCTACAAAATATTCAAATATAAACTAACTAACCCAAAA-------------------------------AAAAACATTTTACTAACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TTCTCCC-------------------------T---CTTATTCTCTC---TTCCCTTTCGCAGTGCATTTGGTATGAGCGATAAGAGTAGCAGTGCTACGAATAGCCTGCCCA------------------------
droPer2 scaffold_1:7343207-7343397 - GTTTTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATTAAGTTATATTCCCAACAAATATTCAAATATTAAGTAACTAACCCAAAA-------------------------------AAAAACATTTTACTAACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TTCTCCC-------------------------T---CTTATTCTGTC---TTCCCTTTCGCAGTGCATTTGGTATGAGCGATAAGAGTAGCAGTGCTACGAATAGCCTGCCCAACAGTCCCATTCACAGCAACAACA
droAna3 scaffold_12916:13121457-13121614 - AAAGGGAAGG---GAAA---------------------------------------------------------------------------------TTTATTAAAATATTATATAGGTCTAT----A--AAACGTAC-----TAAACTGT--TTATAAATAATTA--A-----TTT-----------------------------------------------------------TATTTAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTGTTA---TTTTTTTTTTCAGTGCATTTGGTATGAGCGACAAGAGCAGCAGTGCCACCAACAGCCTCCCGA------------------------
droBip1 scf7180000396580:399123-399322 + TTATTCT---GCT--------------------------AC---AGTGAGAACTCGTTT----AATGGAAACGGGGGTAC------------------TTTATCAATAAATAAAAT-----TTT----T--ATACAAAC-------------------------------------TA-----------------------------------------------------------TATTA---------------------------------TTTAATTAATGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------CTATTATCCTTAAACAATTTAAAATTAAAGCTT--CT-G---TTTCT---GTTTTATTTTTAGTGCATTTGGTATGAGCGACAAGAGCAGCAGCGCCACTAACAGCCTGCCGA------------------------
droKik1 scf7180000301476:356429-356702 + AATCCTA---GCT-----------GTAAGTTTTAAAATTAC---AGTGAAGATTCGTTT-------GG------------GGATAATAAAAAATAAATTAAGCAA-------------AA------------------CTA----TAA--TAA-CAA---AGAATGATAAACTTGTT------------------------------------------------------------------------------------GTTTTTA------------------------------------ATATTATTTGTTTAATATACATCGTATTTAAAACTATACTTTTCCCTT-------------------------------------------TTACCAGC--CTTTATTTCAAGTATTCACTGTACT----------AA-----------------CTGTTAC-------------------------TCTCTCT--TT--CACATTTCTCTTTTGCAGTGCATTTGGTATGAGCGATAAGAGCAGCAGTGCCACGAATAGCCTACCAA------------------------
droFic1 scf7180000454015:123863-123936 + CACCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATT---TTTTTCTTCGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACAAATAGCCTGCCAA------------------------
droEle1 scf7180000491028:2863938-2864150 - TTATTGC----------------------------------------GCAGTTTAGCTC-------GGAAAAAACACTAT------------------TTTATTATTC---------------------------------TAAAT--AATT--TTAA-----------------------------------------------------------------------------------------------AT--------------------------------------------------------ATATTTACTGTACATCGT-TCTATACCTATAATAATATGCC----------------------------------------------TTATCCCCTGTATCTTA--AGATTACTGTACT----------AA-----------------TCCTTCC-------------------------ATTCTGT--T---CATAATCTTTTTTCGTAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACAAGTAGCCTGCCAA------------------------
droRho1 scf7180000780043:93787-93859 + TGTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--T-TCAT---CTTTCTTTCGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACAAATAGCCTGCCAA------------------------
droBia1 scf7180000302422:721362-721425 - TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTCGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACGAACAGCCTGCCAA------------------------
droTak1 scf7180000415865:345596-345712 - TATTCCA---TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCT--AAAACACTGTACT----------TA-----------------TTATTCC-------------------------CTTGCCTTTCTATTT---TTCTCTTTCGCAGTGCTTTTGGTATGAGCGATAAGAGTAGCAGCGCTACAAATAGCCTGCCGA------------------------
droEug1 scf7180000409122:653730-653967 + CGTTA---------AAGATAATCCCAAC-TTCCA--TAATTTACATAAAGGCAT-AGACAAA----------------------------------------------------------------------------C--------------------------------------------------------------TAAGAAATGTTCACATATTTAACAATAAACTAAAAACTATAAG-----------AC--AGATTTTTTAAAAACATTTTAATA----------------------------------------------------------------------------------------------TATGTTC--------------ATTTCCCGCTTATCCCC--AGATTACTGTACT----------AA-----------------TACCTCT-------------------------TTCGTCA--T---TT---CTCTCTCTTGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGCGCAACAAATAGTCTGCCAA------------------------
dm3 chr2L:12271392-12271640 + GACACTCGTA---GAAGTCGATTCC--------T--TT--------CCACACTTTTCTCCTAGAACT-----------------------------------------------------GCAA----AAATTGTACA-----AAT--ATCT--TTAAAATAAAATA--A-----CTA-----------------------------------------------------------TATTAAGTATTGTAACATATTTTAATTTTTA------------------------------------------------------------------------------------------------------------ATAGGCACGTCACAAATTTATATTACCTCATTTATCGTG--ACTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTCC--T---TCC---AATCTCTTCCAGTGCTTTTGGTATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------
droSim2 2l:11926781-11927029 + dsi_18165 GACACTCGTA---GAAGTTGATTCC--------T--TC--------CCACGCTTTGCTCCCAGAACT-----------------------------------------------------CCAA----AAAATATGCA-----AAT--ATCT--TTAAAATAAATTA--A-----CTA-----------------------------------------------------------CATTAAGTATTGTACAATATTTTTATTTTTA------------------------------------------------------------------------------------------------------------ATACGCACATCACAAATTCATATTGTCTCATTTATCGTT--ACTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTTC--T---TCC---AATCTCTTCCAGTGCTTTTGGAATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------
droSec2 scaffold_16:461416-461657 + GACACTCGTA---GAAGTTGAATCC--------T--TG--------CCACGCTTTGCTCCCAG----------------------------------------------------------CAA----AAAATATGCA-----AAT--ATCT--TTAAAATAAAAGA--A-----CTA-----------------------------------------------------------CATTAAGTATTGTA--ACATTTTTATTTTTA------------------------------------------------------------------------------------------------------------ATAAGCACATCACAAATTCATATTTTCTCATTTATCGTG--ACTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTCC--T---TCC---AATCTTTTCCAGTGCTTTTGGAATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------
droYak3 2L:8701574-8701793 + TTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATA--A-----CTA-----------------------------------------------------------CATTTAGTTTT-TGAAATATTTAGATTTTTC--------------------------------------------------------ATTGA-TATATGCATAT----ATATGGCTTATTACAATTAACTT--------ACATTTAATTCATATAATTATACTGTCATATTTATCGCG--GGTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTCC--T---TCC---AATCTCTTTCAGTGCTTTTGGTATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCAA------------------------
droEre2 scaffold_4929:13146386-13146608 - AGCACTCGTA---G-------------------T--TC--------CAAAGCC--GCTCTCAGAACG-----------------------------------------------------GCAA----AATAT--G----ATGAAT--ATCT--TTAAA-AAAATGA--A-----CTA-----------------------------------------------------------CATTTAATTTT-TAAAATAT------------------------------------------------------ATATTTATTTT------------------------------------------------------ACATTTATTTCATAAATT----------CACTTATCGTG--GGTGCACTGTACT----------AA-----------------TCCTGAC-------------------------ACTCTCC--T---TCC---AATCTCTTCCAGTGCTTTTGGTATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTTTTAA---GCT-----------ATAC-TTACA--TTTACTCCCTTTATGTGCTGCTCCTTCGTTCGA-----------AATGAATGTGAAGCAAAATCTACCA-------------CA------------------CTA----TAA--CTGTTAA---TCAATG------------------------------------------------------------------------------------------------------------------------TAGTCTATGCTTTTATTAACTCTCTTTATATAGGCTAT--TCCATCCACAACTA--------------------------------------------------------------------------------TAACTGTT--AACATTTACTCA-----------------TGCTCT--------------------------T---CACGTTCTCTC---TTTGTCGTTGCAGTGCATTTGGTATGAGCGATAAGAGCAGCAGCGCTACCAACAGCCTACCGA------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCTC---TTTGTCGTTGCAG..........................................................................2012.002000000000000000000000000000000000000002000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGTATGAGCGATAAGAGC.................................................2212.002000000000000020000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATAAGAGCAGCAGC...........................................1811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTAC......................................2011.001000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATGAGCGATAAGAGC.................................................1811.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGATAAGAGCAGCAG............................................1811.001000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCGATAAGAGCAGCAG............................................2011.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGCGATAAGAGCAGCAGCG..........................................2811.001000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCGCTACCAACAGCC..............................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTACCAAC..................................2411.001000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAGCAGCAGCGCTACCAACAGC...............................2611.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCGCTACCAACAGCCTACC..........................2611.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCGATAAGAGCAGCAGC...........................................2111.001000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTA.......................................1911.001000000000001000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGCGATAAGAGCAGC..............................................2411.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGCGATAAGAGCAGCAGCGCT........................................2511.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTGGTATGAGCGATAAGAGC.................................................2411.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGTATGAGCGATAAGAGCAGC..............................................2511.001000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTGGTATGAGCGATA......................................................2011.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCAGCGCTACCAACAGCCT.............................2411.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGTATGAGCGATAAG....................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAGCAGCGCTACCAACAGCC..............................2411.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAGCAGCGCTACCAACAGC...............................2411.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCATTTGGTATGAGCGATAAGAGCAG...............................................2811.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATAAGAGCAGCAGCG..........................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTGGTATGAGCGATAAGA...................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATGAGCGATAAGA...................................................1811.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGAGCAGCAGCGCTACCAACAG................................2611.001000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGCTACCAACAGCCTA............................2011.001000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGTATGAGCGATAAGA...................................................2011.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGCTACCAACAGCCTA............................2111.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
ACTGTA-------AAA--CAATTCC--------T--TC--------TTATGCCCTGCGC--AAA----------------------------------------------------------AGGCAAAC----TGTT--A----TAA--CTG------------TA--A-----TTTTACTCATTTTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATTCTCATTCTCTC-------------------------TCTCTCT------CT---TTGTCTTTTACAGTGCATTTGGTATGAGCGATAAGAGCAGCAGCGCCACCAATAGTCTACCGA------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAGCAGCGCCACCAATAGTCTAC...........................2711.001100000
droGri2
ATAATAA---GCT-----------TGAG-CTCCA--TTTTGTACTTTTACGCAT-GCTCTAAAA----------------------------------------------------------AA----ATAAAATGCA-----AATAA--CTGTTTG---CTAATG------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------GCT---------TTAGCTCCATTTTGAATATGCTCATGTT------------------GTACAGAA--TTTTTTCTGTTCAAGCTTTTACTAA-----------------TTC-------------------------------TCTCT--A---TT----CTCTCTTTGCAGTGCATTTGGTATGAGCGATAAGAGCAGCAGCGCCACAAACAGCCTGCCAA------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGCGATAAGAGCAGCAGCGC.........................................2520.50110
droWil2
TAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------AATACTATTTATAT-------------------------------------T--CC-T---TTTCT---GTCTCTTTCTCAGTGCATTTGGAATGAGCGATAAGAGCAGCAGTGCAACCAACAGCCTTCCGA------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAATGAGCGATAAG....................................................1813.00330000
dp5
GGTTTGG----TT--------------------------AC---AGCGGTGACTCATCA-------AG------------G----------------------------------------TAG----AACCA--A--CTA----AGA--ATA-TAG---AGTAGAAGAGATTTGTTTTACTTTTTATTAAGTAATATTCCTACAAAATATTCAAATATAAACTAACTAACCCAAAA-------------------------------AAAAACATTTTACTAACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TTCTCCC-------------------------T---CTTATTCTCTC---TTCCCTTTCGCAGTGCATTTGGTATGAGCGATAAGAGTAGCAGTGCTACGAATAGCCTGCCCA------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCGATAAGAGTAGCAGTGCTA.......................................2411.0010000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGCGATAAGAGTAGCAG............................................2611.0010100000000
droPer2
GTTTTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTATTAAGTTATATTCCCAACAAATATTCAAATATTAAGTAACTAACCCAAAA-------------------------------AAAAACATTTTACTAACGACA--------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TTCTCCC-------------------------T---CTTATTCTGTC---TTCCCTTTCGCAGTGCATTTGGTATGAGCGATAAGAGTAGCAGTGCTACGAATAGCCTGCCCAACAGTCCCATTCACAGCAACAACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AAAGGGAAGG---GAAA---------------------------------------------------------------------------------TTTATTAAAATATTATATAGGTCTAT----A--AAACGTAC-----TAAACTGT--TTATAAATAATTA--A-----TTT-----------------------------------------------------------TATTTAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTGTTA---TTTTTTTTTTCAGTGCATTTGGTATGAGCGACAAGAGCAGCAGTGCCACCAACAGCCTCCCGA------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGAGCAGCAGTGCCACCA....................................2211.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAAGAGCAGCAGTGCC........................................1911.001010000
droBip1
TTATTCT---GCT--------------------------AC---AGTGAGAACTCGTTT----AATGGAAACGGGGGTAC------------------TTTATCAATAAATAAAAT-----TTT----T--ATACAAAC-------------------------------------TA-----------------------------------------------------------TATTA---------------------------------TTTAATTAATGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------CTATTATCCTTAAACAATTTAAAATTAAAGCTT--CT-G---TTTCT---GTTTTATTTTTAGTGCATTTGGTATGAGCGACAAGAGCAGCAGCGCCACTAACAGCCTGCCGA------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AATCCTA---GCT-----------GTAAGTTTTAAAATTAC---AGTGAAGATTCGTTT-------GG------------GGATAATAAAAAATAAATTAAGCAA-------------AA------------------CTA----TAA--TAA-CAA---AGAATGATAAACTTGTT------------------------------------------------------------------------------------GTTTTTA------------------------------------ATATTATTTGTTTAATATACATCGTATTTAAAACTATACTTTTCCCTT-------------------------------------------TTACCAGC--CTTTATTTCAAGTATTCACTGTACT----------AA-----------------CTGTTAC-------------------------TCTCTCT--TT--CACATTTCTCTTTTGCAGTGCATTTGGTATGAGCGATAAGAGCAGCAGTGCCACGAATAGCCTACCAA------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CACCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATT---TTTTTCTTCGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACAAATAGCCTGCCAA------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTATTGC----------------------------------------GCAGTTTAGCTC-------GGAAAAAACACTAT------------------TTTATTATTC---------------------------------TAAAT--AATT--TTAA-----------------------------------------------------------------------------------------------AT--------------------------------------------------------ATATTTACTGTACATCGT-TCTATACCTATAATAATATGCC----------------------------------------------TTATCCCCTGTATCTTA--AGATTACTGTACT----------AA-----------------TCCTTCC-------------------------ATTCTGT--T---CATAATCTTTTTTCGTAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACAAGTAGCCTGCCAA------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--T-TCAT---CTTTCTTTCGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACAAATAGCCTGCCAA------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTTTCGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGTGCAACGAACAGCCTGCCAA------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TATTCCA---TCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCT--AAAACACTGTACT----------TA-----------------TTATTCC-------------------------CTTGCCTTTCTATTT---TTCTCTTTCGCAGTGCTTTTGGTATGAGCGATAAGAGTAGCAGCGCTACAAATAGCCTGCCGA------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CGTTA---------AAGATAATCCCAAC-TTCCA--TAATTTACATAAAGGCAT-AGACAAA----------------------------------------------------------------------------C--------------------------------------------------------------TAAGAAATGTTCACATATTTAACAATAAACTAAAAACTATAAG-----------AC--AGATTTTTTAAAAACATTTTAATA----------------------------------------------------------------------------------------------TATGTTC--------------ATTTCCCGCTTATCCCC--AGATTACTGTACT----------AA-----------------TACCTCT-------------------------TTCGTCA--T---TT---CTCTCTCTTGCAGTGCTTTTGGTATGAGCGATAAGAGCAGCAGCGCAACAAATAGTCTGCCAA------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GACACTCGTA---GAAGTCGATTCC--------T--TT--------CCACACTTTTCTCCTAGAACT-----------------------------------------------------GCAA----AAATTGTACA-----AAT--ATCT--TTAAAATAAAATA--A-----CTA-----------------------------------------------------------TATTAAGTATTGTAACATATTTTAATTTTTA------------------------------------------------------------------------------------------------------------ATAGGCACGTCACAAATTTATATTACCTCATTTATCGTG--ACTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTCC--T---TCC---AATCTCTTCCAGTGCTTTTGGTATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAGCAGTGCAACGAAC..................................21116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000004803000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATGAGTGATAAGAGCAGC..............................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004200000000000000000000000000000000000000000000000000000000000000000000101000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTTGGTATGAGTGATAAG....................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGCAACGAACAGCCT.............................1915.0050000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATGAGTGATAAGAGCAGCAG............................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGAACAGCC..............................2615.0050000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGTGATAAGAGCAGCAG............................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGTGATAAGAGCA................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTGATAAGAGCAGCAGTGCAACG.....................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGC..............................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTGATAAGAGCAGCAGTGC.........................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGTGATAAGAGC.................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGTGATAAGAGCAGCAGT...........................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTTGGTATGAGTGATAA.....................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAGCAGCAGTGCAACGAACAGC...............................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATGAGTGATAAGAGCAGCAGTG..........................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGCAGTGCAAC......................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTTGGTATGAGTGATA......................................................2013.0030000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAGCAGTGCAACGAACAGCC..............................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGAACA.................................2313.0030000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTGGTATGAGTGATAA.....................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAGCAGTGCAACGAACAGC...............................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATGAGTGATAAGAGCAGCAGTG..........................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATGAGTGATAAGAGCAG...............................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGTGATAAGAGCAGC..............................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATAAGAGCAGCAGTGCAACG.....................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGAGCAGCAGTGCAACGAACAGC...............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATAAGAGCAGCAGTGCAA.......................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGCAG............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGCAGTGCAACG.....................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGAGCAGCAGTGCA........................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGTGATAAGAGCAGCAAAA..........................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGAACAGCCT.............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTGGTATGAGTGATAAGAGCAGC..............................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTGCAACGAACAGCCTGCCGA------------------------2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATAAGAGCAGCAGT...........................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATGAGTGATAAGAGCAGCAGT...........................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGAGCAGCAGTGCAACG.....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGCAGTGCA........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGAGCAGCAGTGCAA.......................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGAGCAGCAGTGCAAC......................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGCAGTG..........................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATGAGTGATAAGAGC.................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGGTATGAGTGATAAGAGCAGC..............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGAACAG................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCAGTGCAACGAACAGCCT.............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATGAGTGATAAGAGC.................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGTGATAAGAGCAGCAGTGCA........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTTTGGTATGAGTGA........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGC-------------------------TCTCTCC--T---TCC---AATCTCTT..............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAGCAGTGCAACGAA...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAGCAGTGCAACGAAA..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGCAGT...........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTGATAAGAGCAGCAGTGG.........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATGAGTGATAAGAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATAAGAGCAGCAGTGCAACG.....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATGAGTGATAAGAGCA................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAGCAGTGCAACGAACAGCCT.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTTTGGTATGAGT..........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGAGCAGCAGTGCAACG.....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAGCAGTGCAACGAACAGCCT.............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATGAGTGATAAGAGCAGCAGTGC.........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTGATAAGAGCAGCAGTGCAACGAA...................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATGAGTGATAAGAGCAGCAGT...........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGTG--ACTTCACTGTACT----------AA-----------------TCCTGGC-------------------------T........................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGAACAGC...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTGATAAGAGCAGCAGT...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATGAGTGATAAGAGCAGCAG............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGAGCAGCAGTGCAACGAACA.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCAGCAGTGCAACG.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGAACAGCCTG............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATGAGTGATAAGAGCAGCC.............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTATGAGTGATAAGA...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAGCAGCAGTGCAACG.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTGCAACGAACAGCC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGATAAGAGCAGCAGTGC.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATAAGAGCAGCAGTGCA........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGGTATGAGTGATAAGA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATGAGTGATAAGAGCAGCA.............................................2411.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATGAGTGATAAGAGCAGC..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGTGCAACGAACAGCCT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGTGCTTTTGGTATGAGTGAT.......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGAGCAGCAGTGCAACGAAC..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTGATAAGAGCAGCAGTGCAAC......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATGAGTGATAAGAGCAGCAGTGCA........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTTGGTATGAGTGATAAGAGCAGC..............................................2811.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATAAGAGCAGCAGTGCAA.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGTGATAAGAGCAG...............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACGAACAGCCTG............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATAAGAGCAGCAGTGCAACGA....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTGATAAGAGCAGCAGTGCAA.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGATAAGAGCAGCAG............................................1811.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGAGCAGCAGTGCAACGAACAGCC..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGA....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGAACAGCCTGCCGA------------------------1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TACA-----AAT--ATCT--TTAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GACACTCGTA---GAAGTTGATTCC--------T--TC--------CCACGCTTTGCTCCCAGAACT-----------------------------------------------------CCAA----AAAATATGCA-----AAT--ATCT--TTAAAATAAATTA--A-----CTA-----------------------------------------------------------CATTAAGTATTGTACAATATTTTTATTTTTA------------------------------------------------------------------------------------------------------------ATACGCACATCACAAATTCATATTGTCTCATTTATCGTT--ACTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTTC--T---TCC---AATCTCTTCCAGTGCTTTTGGAATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAGCAGCAGTGCAACGAACAGCC..............................2613.00300000000002010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAATGAGTGATAAGAGCAGC..............................................2511.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGGAATGAGTGATAAGAGCAG...............................................2411.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTTGGAATGAGTGATAAGAGCA................................................2611.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAATGAGTGATAAGAGCAGC..............................................2411.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATGAGTGATAAGAGCAGCAGT...........................................2611.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGTGATAAGAGCA................................................1711.00100000000001000000
droSec2
GACACTCGTA---GAAGTTGAATCC--------T--TG--------CCACGCTTTGCTCCCAG----------------------------------------------------------CAA----AAAATATGCA-----AAT--ATCT--TTAAAATAAAAGA--A-----CTA-----------------------------------------------------------CATTAAGTATTGTA--ACATTTTTATTTTTA------------------------------------------------------------------------------------------------------------ATAAGCACATCACAAATTCATATTTTCTCATTTATCGTG--ACTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTCC--T---TCC---AATCTTTTCCAGTGCTTTTGGAATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................AAAATAAAAGA--A-----CTA-----------------------------------------------------------CATT...................................................................................................................................................................................................................................................................................................................................................................1911.0011000
droYak3
TTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATA--A-----CTA-----------------------------------------------------------CATTTAGTTTT-TGAAATATTTAGATTTTTC--------------------------------------------------------ATTGA-TATATGCATAT----ATATGGCTTATTACAATTAACTT--------ACATTTAATTCATATAATTATACTGTCATATTTATCGCG--GGTTCACTGTACT----------AA-----------------TCCTGGC-------------------------TCTCTCC--T---TCC---AATCTCTTTCAGTGCTTTTGGTATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCAA------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGAGTGATAAGAG..................................................2011.00100000010000
droEre2
AGCACTCGTA---G-------------------T--TC--------CAAAGCC--GCTCTCAGAACG-----------------------------------------------------GCAA----AATAT--G----ATGAAT--ATCT--TTAAA-AAAATGA--A-----CTA-----------------------------------------------------------CATTTAATTTT-TAAAATAT------------------------------------------------------ATATTTATTTT------------------------------------------------------ACATTTATTTCATAAATT----------CACTTATCGTG--GGTGCACTGTACT----------AA-----------------TCCTGAC-------------------------ACTCTCC--T---TCC---AATCTCTTCCAGTGCTTTTGGTATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGA------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATGAGTGATAAGAGCAGCAG............................................2414.0040000004
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGATAAGAGCAGCAGTGCAACGAA...................................2611.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTTTGGTATGAGTGATAAA....................................................2411.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTATGAGTGATAAGAGCAGCAG............................................2511.0011000000

Generated: 05/16/2015 at 10:53 PM