ID:

dvi_12254

 Coordinate:

scaffold_12963:16305419-16305517 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ17691-cds]; exon [dvir_GLEANR_2264:8]; CDS [Dvir\GJ17691-cds]; exon [dvir_GLEANR_2264:7]; intron [Dvir\GJ17691-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------##################################################
TTATGGTAATAGCACCGTTGCCACCGATTTTACGACCGTTCGTGTTAAGGGTGAGTCTGTTCGCCAGCCGGCTGAAAGAACAATCAACTAATTAGACACATATATATGTTGATCGATATAATATATATATAAATGTTTCTATTTGTTAGGCAAATTCGCCGCCTTGTGGCCTTTCCTGGGCATTTGCGCCGAGGTCCTG
**************************************************.(((...((((((((....))).....))))).))).(((((((((.((((.(((((((..((.......))..))))))).)))).))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 GSM1528803
follicle cells		 M061
embryo
 M027
male body		 SRR060665
9_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 V116
male body		 V047
embryo
 SRR060666
160_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR1106730
embryo_16-30h
 M028
head
 V053
head
 SRR060662
9x160_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR1106715
embryo_4-6h
.........................GATTTTACGACCGTTCGTGTT......................................................................................................................................................... 21 0 2 2.00 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AAATTCGCCGCCTTGTGGCCTTTCC....................... 25 0 2 1.50 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................TACGACCGTTCGTGTTAAGGGC................................................................................................................................................... 22 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ATTTGCGCCGAGGTCCTG 18 0 2 1.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CGCCTTGTGGCCTTTCCTGGGC.................. 22 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................CCACCGATTTTACGACCGTT............................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AATTCGCCGCCTTGTGGCCTTTCCT...................... 25 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................AAATTCGCCGCCTTGTGGCCTTTCCTGGG................... 29 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CCGTTGCCACCGATTTTACGACCG................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TTACGACCGTTCGTGTTAAGGGC................................................................................................................................................... 23 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGCCGCCTTGTGGCCTTTCC....................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TTTACGACCGTTCGTGTTAAGGGTGAG................................................................................................................................................ 27 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................CACCGATTTTACGACCGTTCGTGTTAAGG..................................................................................................................................................... 29 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
........ATAGCACCGTTGCCACCGATTT......................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................GTTGCCACCGATTTTACGACCGT................................................................................................................................................................ 23 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CGCCTTGTGGCCTTTCCTGGG................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TAGCACCGTTGCCACCGATT.......................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TGCCACCGATTTTACGACC.................................................................................................................................................................. 19 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GATTTTACGACCGTTCGTGTTAAGG..................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................CACCGATTTTACGACCGTTCGTGT.......................................................................................................................................................... 24 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................ATTCGCCGCCTTGTGGCCTTTCCTGGG................... 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GCACCGTTGCCACCGATTTTACGACC.................................................................................................................................................................. 26 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TTTACGACCGTTCGTGTTAAGGGC................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GCCACCGATTTTACGACCGTTCGT............................................................................................................................................................ 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................TCGCCAGCCGGCTGAAAAA........................................................................................................................ 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GACCGTTCGTGTTAAGGGC................................................................................................................................................... 19 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................CACCGATTTTACGACCGTTCGT............................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TTACGACCGTTCGTGTTAAGG..................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GATTTTACGACCGGTCGTGTTAAGG..................................................................................................................................................... 25 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GCCACCGATTTTACGACCGTTC.............................................................................................................................................................. 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTGTGGCCTTTCCTGGGCA................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GCCTTGTGGCCTTTCCTGGGCATTTG............. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................GCCACCGATTTTACGACCGTTCAT............................................................................................................................................................ 24 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................CTTGTGGCCTTTCCTGGG................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TGAGACACCTTTATATGTTGAT...................................................................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................CAAGGGTTGGTCTGTTCGCC...................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................CGTTGGTGTTATGGGTGA................................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................TAAGGGTTCGGCTGTTCGCC...................................................................................................................................... 20 3 9 0.22 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...............................TAGATCGTTCGTGTTAAGGG.................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................TAAGGGTATGGCTGTTCGCC...................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................AAGGGTATGGCTGTTCGCCA..................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................AAGGGTCCGGCTGTTCGCC...................................................................................................................................... 19 3 11 0.18 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0
.....................................................AGTCTGTTCGCCATCCGGAG.............................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CAAGGGTTGGTCTGTTCGC....................................................................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................AGGGTTGGTCTGTTCGCCC..................................................................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..............................................AAGGGTATGGCTGTTCGCC...................................................................................................................................... 19 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GCCACTTTGTGGCCGTTCCT...................... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................AGGGTATGGCTGTTCGCCA..................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................GGTAGGCAAATCCGCCGG..................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................AAGGGTTTGGCTGTTCGCC...................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AATACCATTATCGTGGCAACGGTGGCTAAAATGCTGGCAAGCACAATTCCCACTCAGACAAGCGGTCGGCCGACTTTCTTGTTAGTTGATTAATCTGTGTATATATACAACTAGCTATATTATATATATATTTACAAAGATAAACAATCCGTTTAAGCGGCGGAACACCGGAAAGGACCCGTAAACGCGGCTCCAGGAC
**************************************************.(((...((((((((....))).....))))).))).(((((((((.((((.(((((((..((.......))..))))))).)))).))))...)))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060682
9x140_0-2h_embryos_total
 V116
male body		 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 SRR060668
160x9_males_carcasses_total
 SRR060684
140x9_0-2h_embryos_total
 M061
embryo
 M028
head
...............................TGCTGGCAAGCACACTTCA..................................................................................................................................................... 19 2 2 1.00 2 1 0 1 0 0 0 0 0
......................TGGGTAAAATGCTGGCATGTA............................................................................................................................................................ 21 3 6 0.67 4 0 2 0 1 0 0 1 0
..............................TTGCTGGCAAGCACACTTC...................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0 0 0
......................TGGGTAAAATGCTGGCATG.............................................................................................................................................................. 19 2 4 0.50 2 0 0 0 0 1 1 0 0
.......................GGGTAAAATGCTGGCATGTA............................................................................................................................................................ 20 3 10 0.30 3 0 3 0 0 0 0 0 0
.......................GGGTAAAATGCTGGCATG.............................................................................................................................................................. 18 2 5 0.20 1 0 0 0 1 0 0 0 0
......................TGGGTAAAATGCTGGCATGT............................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 0 0 0 1
................................................................................................................................................................CGAATCACCGAAAAGGACC.................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:16305369-16305567 + dvi_12254 TTATGGTA---ATAGCACCG---TTGCCACCGATTTTACGACCGTTCGTGTTAAGGGTGAGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-TCGCCAGCCGGCT-----------------------------------------GAAAGAACAATCAACTAATTAGA------------------------CACA----------TATATATGTTGATCGATATAATATATATATAAATGTTTCTATTTGTTAGGCA---AATTCGCCGCC-TTGTGGCCTTTCCTGGGCATT--TGCGCCGAGGTCCTG
droMoj3 scaffold_6500:21244778-21244946 + TTATGCCA---ATAGCACCG---TTGCCACCGATGTTGTAACCGTTCGTGTTAAGGGTAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------TAATGCTGAAT---------------------------TCACTCT----------TCTCGATATATATCTATCTAATCGTTTTATCG------TTCACTCTCAGGCA---AATTTGCTGCC-TTGTGGCCTTTCCTTGGCATT--TGTGCTGAGGTTTTG
droGri2 scaffold_15252:13731088-13731261 + TTATGGTGACAATAGCACCG---TTGCCACCGATTTTACAACCGTTCGTGTTAAGGGTGAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCC-TCTGGCT-----------------------------------------GGGAAGGGAATCTGATGA---------------------------------TTTTTAACTCATAAT-----------------AATTT--------CTTCTTTTTTTTAGGTA---AATTCGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droWil2 scf2_1100000004558:1998706-1998834 - ATT-----------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-AAC--TCGTCGTCGTGGAAGT---GTTCAAT-TTGTCAGCTGTCA-----------------------------------------CGAGGCACAA--AACTAGGCAGCCATTTTGTCTGTTATATGGTA-------ATATGGCATATATAT-----------------ATACA--------TATATATATTTTAGGCA---AATT----------------------------------------------
dp5 4_group4:958466-958530 - GTG-----------------------------------------------TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGCGCTGAGGTGCTT
droPer2 scaffold_46:100565-100629 + GTG-----------------------------------------------TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGCGCTGAGGTGCTT
droAna3 scaffold_12916:4350442-4350732 - ATACGGAA---CGAAAATCGAAATCGCCACCGACGCCTCCACTGTGCGTGTTAAGGGTAAGTTTGGCTTTTAAGCCAGGAATAGAGGAGTGTCTTCAGGGCCACCGGAAAGACTAATGTCGCCTTGCTTCGTCGGCCGAAGGTCCTGGCCAAAAAAAAAAAAATGTGTCTAATGACTGGCAGGCCTTGTGACGAAGCTTGGCTGATATTTAGATTCGATTATAA--------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TAATA--------TATTTTTTTTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droBip1 scf7180000396737:431113-431191 + ATA-----------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-------------------AAT--------AATGTACCTTTTAGGCA---AATTCGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droKik1 scf7180000302472:1646681-1646771 - TTA-----------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----------------------------------------------------------------------------------------------------------------------------------------ATATATCCTATAAAT-----------------ACATT--------GTAAATTATTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTT
droFic1 scf7180000454115:975386-975456 + ATA-----------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC--------CTTGTGCTTTGCAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droEle1 scf7180000491011:691469-691623 - AGATGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--CCGTGCGCGTGGAAGTTCAGCC-CAAAC-------GGGGCGACATCGGAGGAGGTGAGTCCTTTCAGCCAGGATATGTTTTAAAATAACAATCGACAA---------------------------ATACTCA----------GTCATAGAAATATCAATATAAAAAATTCATTATTATTATTATTTATT----------------------------------------------------------
droRho1 scf7180000778134:32583-32684 - CAC-----------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATATATTTATATAATATATATATTGTGCTCCCCATTCGATGGGCCTTGTTAATGCTGCCGATGAAGCCTTTGTAGCGCATTCCTCCGCCGA-------
droBia1 scf7180000301518:410917-410994 - CTATGGTGTAAACACCACCGCTCCTGCCAGCGACTTCACAACTGTGCGTGTTAAGGGTAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAT-------CGGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAG
droTak1 scf7180000415876:197925-197995 - ATA-----------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA--------TTTGTTCTTCCTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droEug1 scf7180000409461:99808-99869 + TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCATAGGCA---AATTTGCCGCC-GTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
dm3 chr2L:8107717-8107797 + ATA-----------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTCT-----------TTTATTAACAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droSim2 2l:7835029-7835108 + TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTTT--------TATATTTAATATAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droSec2 scaffold_3:3604114-3604196 + AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTCT--------TATATTTAATAAAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droYak3 2L:10738498-10738578 + AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTATGA--------------------------------------------------------------------------------------------------------------------------------------------------T-------------------TCT--------TTTATTATTTGTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG
droEre2 scaffold_4929:17013540-17013623 + TGC-----------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCATTTATGA--------------------------------------------------------------------------------------------------------------------------------------------------T-------------------TCT--------TTCATTACTTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TTATGGTA---ATAGCACCG---TTGCCACCGATTTTACGACCGTTCGTGTTAAGGGTGAGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-TCGCCAGCCGGCT-----------------------------------------GAAAGAACAATCAACTAATTAGA------------------------CACA----------TATATATGTTGATCGATATAATATATATATAAATGTTTCTATTTGTTAGGCA---AATTCGCCGCC-TTGTGGCCTTTCCTGGGCATT--TGCGCCGAGGTCCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................GATTTTACGACCGTTCGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2122.004000000000000000000000000000000000000000000000000000000000000004
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTCGCCGCC-TTGTGGCCTTTCC.........................2521.503000000000000000000000000000000000000000000000000000000000000003
....................................TACGACCGTTCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2221.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--TGCGCCGAGGTCCTG1821.002000000000000000200000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCC-TTGTGGCCTTTCCTGGGC....................2221.002000200000000000000000000000000000000000000000000000000000000000
..........................CCACCGATTTTACGACCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCGCCGCC-TTGTGGCCTTTCCT........................2520.501000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTCGCCGCC-TTGTGGCCTTTCCTGGG.....................2920.501000100000000000000000000000000000000000000000000000000000000000
.................CCG---TTGCCACCGATTTTACGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
...................................TTACGACCGTTCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2320.501100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCGCC-TTGTGGCCTTTCC.........................2120.501001000000000000000000000000000000000000000000000000000000000000
..................................TTTACGACCGTTCGTGTTAAGGGTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000000000000000000000000000000000000001000
...........................CACCGATTTTACGACCGTTCGTGTTAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2920.501000000000000000000000000000000000000000000000000000000000010000
...........ATAGCACCG---TTGCCACCGATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
...................G---TTGCCACCGATTTTACGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCC-TTGTGGCCTTTCCTGGG.....................2120.501001000000000000000000000000000000000000000000000000000000000000
............TAGCACCG---TTGCCACCGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000000000000000000000000000000000000000000000000000000000000
........................TGCCACCGATTTTACGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000000000000000000000000000100000000000000000000000000
...............................GATTTTACGACCGTTCGTGTTAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000000000000000000000000000000000000000001
...........................CACCGATTTTACGACCGTTCGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCCGCC-TTGTGGCCTTTCCTGGG.....................2720.501000100000000000000000000000000000000000000000000000000000000000
..............GCACCG---TTGCCACCGATTTTACGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000000000000000000000000000000000000000000000000000000000000
..................................TTTACGACCGTTCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
.........................GCCACCGATTTTACGACCGTTCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501000000000000000000000000000000000000000000000000000000000000001
.......................................GACCGTTCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000000000000000000000000000000000000000000000000000010
...........................CACCGATTTTACGACCGTTCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
...................................TTACGACCGTTCGTGTTAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
.........................GCCACCGATTTTACGACCGTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGCCTTTCCTGGGCA...................1920.501001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TTGTGGCCTTTCCTGGGCATT--TG.............2620.501001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTGTGGCCTTTCCTGGG.....................1820.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTATGCCA---ATAGCACCG---TTGCCACCGATGTTGTAACCGTTCGTGTTAAGGGTAAATT----------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------------TAATGCTGAAT---------------------------TCACTCT----------TCTCGATATATATCTATCTAATCGTTTTATCG------TTCACTCTCAGGCA---AATTTGCTGCC-TTGTGGCCTTTCCTTGGCATT--TGTGCTGAGGTTTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................ACCGATGTTGTAACCGTTCGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2414.004400000
.......................................AACCGTTCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................1914.004200002
.........................GCCACCGATGTTGTAACCGTTCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCTGCC-TTGTGGCC..............................1811.001000010
...........................CACCGATGTTGTAACCGTTCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................TGCCACCGATGTTGTAACCGTTCGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................GATGTTGTAACCGTTCGTGTTAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTGTGGCCTTTCCTTGGC....................1911.001100000
..............GCACCG---TTGCCACCGATGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................GTAACCGTTCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................GTTGTAACCGTTCGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGCC-TTGTGGCCTTTC..........................2011.001100000
.............................CCGATGTTGTAACCGTTCGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCTGCC-TTGTGGCCTTTCCTTGG.....................2711.001100000
.......................................AACCGTTCGTGTTAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................GCCACCGATGTTGTAACCGTTCGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................ACCG---TTGCCACCGATGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................GTTGTAACCGTTCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--TGTGCTGAGGTTTTG1811.001100000
...............................GATGTTGTAACCGTTCGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCTGCC-TTGTGGCCTTTCCTT.......................2511.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCTGCC-TTGTGGCCTTTC..........................2211.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTTGCTGCC-TTGTGGC...............................1911.001100000
...........................CACCGATGTTGTAACCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
...........ATAGCACCG---TTGCCACCGATGTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCTGCC-TTGTGGCCTTTC..........................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATT--TGTGCTGAGGTT...1811.001100000
....................................TGTAACCGTTCGTGTTAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........ATAGCACCG---TTGCCACCGATGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
TTATGGTGACAATAGCACCG---TTGCCACCGATTTTACAACCGTTCGTGTTAAGGGTGAGTGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCC-TCTGGCT-----------------------------------------GGGAAGGGAATCTGATGA---------------------------------TTTTTAACTCATAAT-----------------AATTT--------CTTCTTTTTTTTAGGTA---AATTCGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCATC--TGTGCTGAGG.....1911.00101
.....GTGACAATAGCACCG---TTGCCACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATC--TGTGCTGAGGTG...1811.00110
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCCGCC-TTGTGGCCTTTC..........................2211.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCATC--TGTGCTGAGGTG...2111.00110
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTA---AATTCGCCGCC-TTGTG.................................1911.00110
..................................TTTACAACCGTTCGTGTTAAGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
droWil2
ATT-----------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-AAC--TCGTCGTCGTGGAAGT---GTTCAAT-TTGTCAGCTGTCA-----------------------------------------CGAGGCACAA--AACTAGGCAGCCATTTTGTCTGTTATATGGTA-------ATATGGCATATATAT-----------------ATACA--------TATATATATTTTAGGCA---AATT----------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
GTG-----------------------------------------------TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGCGCTGAGGTGCTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCTTTCCTGGGCATC--TGCGCTGA.......2712.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCCGCC-TTGTGGCCTTTCCTGGGC....................2911.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCTGGGCATC--TGCGCTGAGGT....2511.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTGGGCATC--TGCGCT.........1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTTCCTGGGCATC--TGCGCTGAG......2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTTCCTGGGCATC--TGCGCT.........2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTGGGCATC--TGCGCTGAG......2211.0010100000000
droPer2
GTG-----------------------------------------------TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGCGCTGAGGTGCTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCTGGGCATC--TGCGCTG........2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCTTTCCTGGGCATC--TGCGCTGA.......2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCC-TTGTGGCCTTTCCTGGGC....................2211.001100000
droAna3
ATACGGAA---CGAAAATCGAAATCGCCACCGACGCCTCCACTGTGCGTGTTAAGGGTAAGTTTGGCTTTTAAGCCAGGAATAGAGGAGTGTCTTCAGGGCCACCGGAAAGACTAATGTCGCCTTGCTTCGTCGGCCGAAGGTCCTGGCCAAAAAAAAAAAAATGTGTCTAATGACTGGCAGGCCTTGTGACGAAGCTTGGCTGATATTTAGATTCGATTATAA--------------------------------------------------------------------------------------------------------------------------------------------------A-----------------TAATA--------TATTTTTTTTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................CACCGACGCCTCCACTGTGCGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002001001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGGCATC--TGTGCTGAGGTGCT.2412.002000002
ATACGGAA---CGAAAATCGAAATCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
....................................CTCCACTGTGCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCATC--TGTGCTGAGGTGC..2211.001001000
.................................CGCCTCCACTGTGCGTGTTAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCC-TTGTGGCCTTTCCTGG......................2411.001100000
............GAAAATCGAAATCGCCACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTGGGCATC--TGTGCTGAGGTGCT.2711.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC--TGTGCTGAGGTGCTG1911.001001000
.................................CGCCTCCACTGTGCGTGTTAAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCA---AATTTGCCGCC-TTGTG.................................1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTTGCCGCC-TTGTGGCCC.............................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCC-TTGTGGCCTTTCCTGGGCA...................2711.001100000
....................................CTCCACTGTGCGTGTTAAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.....................................................................................................................................................................TGTCTAATGACTGGCAGGCCTTGTGAC.......................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTTGCCGCC-TTGTGGCCT.............................2111.001100000
............GAAAATCGAAATCGCCACCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droBip1
ATA-----------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-------------------AAT--------AATGTACCTTTTAGGCA---AATTCGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
TTA-----------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----------------------------------------------------------------------------------------------------------------------------------------ATATATCCTATAAAT-----------------ACATT--------GTAAATTATTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTTSizeHit CountTotal NormTotal
No Reads
droFic1
ATA-----------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCC--------CTTGTGCTTTGCAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
AGATGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT--CCGTGCGCGTGGAAGTTCAGCC-CAAAC-------GGGGCGACATCGGAGGAGGTGAGTCCTTTCAGCCAGGATATGTTTTAAAATAACAATCGACAA---------------------------ATACTCA----------GTCATAGAAATATCAATATAAAAAATTCATTATTATTATTATTTATT----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAC-----------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATATATTTATATAATATATATATTGTGCTCCCCATTCGATGGGCCTTGTTAATGCTGCCGATGAAGCCTTTGTAGCGCATTCCTCCGCCGA-------SizeHit CountTotal NormTotal
No Reads
droBia1
CTATGGTGTAAACACCACCGCTCCTGCCAGCGACTTCACAACTGTGCGTGTTAAGGGTAAGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAT-------CGGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAGSizeHit CountTotal NormTotal
No Reads
droTak1
ATA-----------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA--------TTTGTTCTTCCTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotal
No Reads
droEug1
TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCATAGGCA---AATTTGCCGCC-GTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotal
No Reads
dm3
ATA-----------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTCT-----------TTTATTAACAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGGCATC--TGTGCTGAGGTGC..24112.00120000000000000000000000000000000000001000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000400000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGGCATC--TGTGCTGAGGTG...2318.0080000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTGGGCATC--TGTGCTGAGGTGC..2616.0060000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGGCATC--TGTGCTGAGGTGC..2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATC--TGTGCTGAGGT....1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGGCATC--TGTGCTGAGGTGCT.2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGGCATC--TGTGCTGAGGTGCT.2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCA---AATTTGCCGCC-TTGT..................................1913.0030000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGCCTTTCCTGGGCATC--TGT............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATC--TGTGCTGAGGTGC..2112.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCA---AATTTGCCGCC-TTGTG.................................2012.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGGCATC--TGTGCTGAGGTGCT.2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCC-TTGTGGCCTTTCCTGGGCAT..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC--TGTGCTGAGGTGCTG1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGGCATC--TGTGCTGAGGTGCTG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC--TGTGCTGAGGTGCTG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGCCTTTCCTGGGCATC--...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTGTGGCCTTTCCTGGGCATC--T..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTGGGCATC--TGTGCTGAGGTG...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATC--TGTGCTGAGGTGCTG2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................A-------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTCT-----------TTTA...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCCTTTCCTGGGCATC--TG.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGGCATC--TGTGCTGAGG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATC--TGTGCTGAGGTGCT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCTGGGCATC--TGTGCT.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCTTTCCTGGGCATC--TGTGCTGA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................A--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTCT-----------TTTATTAACAG........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGGCATC--TGTGCTGA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTCCTGGGCATC--TGTGCTGAGG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATC--TGTGCTGAGGTGCT.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCC-TTGTGGCCTTTCCTGGGC....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGGCATC--TGTGCTGAGGTGG..2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGCA---AATTTGCCGCC-TTG...................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTTGCCGCC-TTGTGGCCTTT...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC--TGTGCTGAGGTGCT.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGGCATC--TGTGCTGAGGTGC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TTGTGGCCTTTCCTG.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCC-TTGTGGCCTTTCCTGG......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTTGCCGCC-TTGTGGCCTTTCC.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTTT--------TATATTTAATATAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TTGTGGCCTTTCCTGGGC....................2112.00201100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATC--TGTGCTGAGGTGCTG2312.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC--TGTGCTGAGGTGCTG1811.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCCGCC-TTGTGGCCTTTCCTGGGC....................2811.00101000000000000000
droSec2
AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATATAA--------------------------------------------------------------------------------------------------------------------------------------------------T-----------------TTTCT--------TATATTTAATAAAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCATC--TGTGCTGAGGTGCT.2311.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCTGGGCATC--TGTGCTGAGGT....2511.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC--TGTGCTGAGGTGCTG1911.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTTGCCGCC-TTGTGGCCTTTCCT........................2611.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTGGGCATC--TGTGCTGAGGTGCT.2611.0010100
droYak3
AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTATGA--------------------------------------------------------------------------------------------------------------------------------------------------T-------------------TCT--------TTTATTATTTGTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCC-TTGTGGCCTTTCCTGGGC....................2215.00503200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TTGTGGCCTTTCCTGGGCATC--...............2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTGTGGCCTTTCCTGGGCAT..................2111.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CC-TTGTGGCCTTTCCTGGGC....................2011.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCC-TTGTGGCCTTTCCTGGGG....................2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGGCATC--TGTGCTGAGGTGC..2411.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C-TTGTGGCCTTTCCTGGGCATC--...............2211.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATC--TGTGCTGAGGTGCTG1911.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTTCCTGGGCATC--TGTGCTGA.......2511.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TTGTGGCCTTTCCTGGGCATC--T..............2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC--TGTGCTGAGGTGCTG1811.00101000000000
droEre2
TGC-----------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCATTTATGA--------------------------------------------------------------------------------------------------------------------------------------------------T-------------------TCT--------TTCATTACTTTTAGGCA---AATTTGCCGCC-TTGTGGCCTTTCCTGGGCATC--TGTGCTGAGGTGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC--TGTGCTGAGGTGCTG1813.0030000030
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TTGTGGCCTTTCCTGGGC....................2111.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCA---AATTTGCCGCC-TTGTGGCC..............................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCATC--TGTGCTGAGGTGCT.2311.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCC-TTGTGGCCTTTCCTGGGCATC--TGT............2711.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTTCCTGGGCATC--TGTGCTGAGGT....2811.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCCGCC-TTGTGGCCTTTCCTGGGC....................2911.0010100000

Generated: 05/16/2015 at 09:06 PM