ID:

dvi_12187

 Coordinate:

scaffold_12963:16129544-16129694 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.2 -29.2 -29.2

Flybase annnotation

exon [dvir_GLEANR_2245:2]; CDS [Dvir\GJ17670-cds]; intron [Dvir\GJ17670-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CACGCCCACCATCTGCGGCGAGGGCGTAACGGAGTGTTTTGCCAAATCAGGTAAGTCTCTAAAGGCTCTCGCCAGGTGTCCCATGACTCACTCGAATTACGCATGTAAATATGTACATATGTACATACACAACTACACGGCCAAACAGTTGTAGATAAGTCTCTCAGCCAGTTTCTTTATTGGGCTAAGTTCATTGGTGTGCCTATCTCCGGGCAGCTGAACACGGTGCTCAAGAGCCGATAGCAATAAAT
**************************************************...(((((....)))))..((((((((((....(((.....)))....)))).(((...(((((((....))))))).))).(((((..((......)))))))........((.(((((((......))).)))).))....))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 SRR060665
9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 M061
embryo
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 M027
male body		 SRR1106729
mixed whole adult body
 V047
embryo
 SRR060662
9x160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060663
160_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR1106721
embryo_10-12h
.........................GTAACGGAGTGTTTTGCCAAAT............................................................................................................................................................................................................ 22 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTAACGGAGTGTTTTGCCAAATC........................................................................................................................................................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GTAACGGAGTGTTTTGCCAAATCA.......................................................................................................................................................................................................... 24 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......CACCATCTGCGGCGAGGGCGT................................................................................................................................................................................................................................ 21 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0
.....CCACCATCTGCGGCGAGGGC.................................................................................................................................................................................................................................. 20 0 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
CACGCCCACCATCTGCGGC........................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...GCTCACCATCTGCGGCGAGGGCGT................................................................................................................................................................................................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................AGGGCGTAACGGAGTGTTTTGC................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ATCTGCGGCGAGGGCGTAACGGAGTGT...................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....TCACCATCTGCGGCGAGGGC.................................................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................CGGAGTGTTTTTCCAAATCA.......................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..CGCCCACCATCTGCGGCGAGGGC.................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...GCCCACCATCTGCGGCGAGG.................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AACGGAGTGTTTTGCCAAATCAGATGC..................................................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................AAAGGAGTGTTTTGCCAAATC........................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................GTAACGGAGTGTTTTGCC................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................GAGGGCGTAACGGAGTGT...................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......CACCATCTGCGGCGAGGGC.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................AAACAGTTGTAGATAAGTCTCTCA..................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................CGAGGGCGTAACGGAGTG....................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................GGGCGTAACGGAGTGTTT.................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ATCTGCGGCGAGGGCGTAAC............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......CACCATCTGCGGCGAGGGCGTAAC............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................GGTGAATCTCTAAAGGCTGTC..................................................................................................................................................................................... 21 3 2 1.00 2 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..........ATCTGCGGCGAGGGCGTAACGGA.......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CCACCATCTGCGGCGAGGGCGTAA.............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................GAGTGTTTTGCCAAATCAGATGC..................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......CACCATCTGCGGCGAGGGCGTA............................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............GCGGCGAGGGCGTAACGG........................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....CCACCATCTGCGGCGAGGGCGT................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CCCACCATCTGCGGCGAGGGCGTA............................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..CGCCCACCATCTGCGGCGAGGG................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................ACGGAGTGTTTTGCCAAATC........................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........ATCTGCGGCGAGGGCGTAAA............................................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.ACGCCCACCATCTGCGGCGAGGGCGT................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CCCACCATCTGCGGCGAGGGC.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................GGTGAATCTCTAAAGGCTGTCG.................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.................................................GGTGAATCTCTAAAGGCT........................................................................................................................................................................................ 18 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGTCTCCGGGAAGCTGAACA............................ 20 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGTGGCCCTATCTCCGT....................................... 19 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................CAATTTCTTTATTGGGCTTA............................................................... 20 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................GGGCGTAACGGAAGGTTTC................................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................CACGGTGTTCTAGAGCC............. 17 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................................ACGAAGCTGAACACGGTGCT..................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GTGCGGGTGGTAGACGCCGCTCCCGCATTGCCTCACAAAACGGTTTAGTCCATTCAGAGATTTCCGAGAGCGGTCCACAGGGTACTGAGTGAGCTTAATGCGTACATTTATACATGTATACATGTATGTGTTGATGTGCCGGTTTGTCAACATCTATTCAGAGAGTCGGTCAAAGAAATAACCCGATTCAAGTAACCACACGGATAGAGGCCCGTCGACTTGTGCCACGAGTTCTCGGCTATCGTTATTTA
**************************************************...(((((....)))))..((((((((((....(((.....)))....)))).(((...(((((((....))))))).))).(((((..((......)))))))........((.(((((((......))).)))).))....))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 V053
head
 SRR1106729
mixed whole adult body
 SRR060666
160_males_carcasses_total
 SRR060660
Argentina_ovaries_total
 SRR060672
9x160_females_carcasses_total
 M047
female body
.......................................................................GGTCCACATTGTACTGAGCGAG.............................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................TCAAGAAACCACACGGCAAGA........................................... 21 3 6 0.17 1 0 0 1 0 0 0 0
.......................................................................................................................ACATGTAAGTGTTAATGGGC................................................................................................................ 20 3 7 0.14 1 0 1 0 0 0 0 0
..........................................................................................................................TGTGTAGGTTGATGTGCCGGT............................................................................................................ 21 3 9 0.11 1 0 1 0 0 0 0 0
.............................................TCGTCCATACCGAGATTTC........................................................................................................................................................................................... 19 3 11 0.09 1 0 0 0 1 0 0 0
.......................................ACGGTTTAGTTCATTCAA.................................................................................................................................................................................................. 18 2 13 0.08 1 1 0 0 0 0 0 0
..........................................................................................................................TGTTTGTATTGGTGTGCCGGT............................................................................................................ 21 3 14 0.07 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................GGACTTGAGCCATGAGTTC................. 19 3 17 0.06 1 0 0 0 0 1 0 0
...................................................................................................................................TGCTGTGCCGGTTAGCCAA..................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 1 0
..............................................................................................................TGCATGTATACATGTATGTG......................................................................................................................... 20 1 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:16129494-16129744 + dvi_12187 CACGCCCA-CCATCTGCGGCGAGGGCGTAACGGAGTGTTTTGCCAAATCAGGTAAGTCT------------------------------------------------------------------------------------CTAAAGGCTCTCGC---------CAGGTGTCCCATGACTCACTCGAATTACGCATGTAAATATGTACATATGTACATACACAACTACAC-GGCCAAACAGTTGTAG-------------------------------ATAAGTCTCTCAGCCAGTTTCTTTATTGGGCTA--AGTTCA-TTGGT--------------GTGCCTATCTC-CGGGCAGCTGAACACG-----------------------GTGCTCAAGAGCCGATAGCAATAAAT
droMoj3 scaffold_6500:5589865-5590118 + CACATCCC-AAACCTGTACAGATGCTCAAGCCGAATGTTTTGTGAAAACAGGTGAGATACACTCGTTGGGACCCATGAATCATCCACAATTGGGATTGGCGAACACACA--------------------------------------------------------------------------------------------------GCTGTAT-------------------------ATGGTTACAGATAAGTTAATAGTTGGCT-----------------------TACCAAAGTTCTTTATT----------------GGACACAGCTTACTCGGAGCACTTATCTG-CAGCCAGGTGGACAAGCGATAAGAAATGTATTTTCATATACATTTTTGCGCCTACAACGATGAGT
droGri2 scaffold_15252:13555651-13555853 + CAATCCCA-CCGCATGTCCGGCTGATGTTACCCAGTGTTTTATTCAAACAGGTAAGTCGCCTCCGAT-----------------TTTGGTTTAGGTTAGGTGACTCACAAGTATATATGCCAATAGATAAGTAGGACAAGTTCATTTTAGTACTTATCGG-------------------------------TGTGTGCATGGGTGTGTCTGTATCTGTGTGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTCAAGTGACGATAACAACAAAT
droWil2 scf2_1100000004762:1090390-1090501 + CTGTAACT--GCTATATACGAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTTCTTTT----TTTTTATGTATGTATATATGTATGTATGTACATAG---------------------------ATTTTCATTTGGCTTAAATTGTTGCAGTTGCTTCTC--------------------------------------------------------------A-CAG--------------------------------------------------------------
droAna3 scaffold_13137:1024666-1024742 - G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATACATATGTATGTATGTATATACAAAAATACAA-ATGCATACCGCCCTAG-------------------------------TGAAATTAGCCGGTCATAT--------------------------------------------------TTTT-----------------------------------------------------------------
droBip1 scf7180000396740:263627-263742 - AAT-TATACATATAAATA-------------------------------------------------------------------------------------CATATA----------------------------------------------------------------------------------TATGTATGTATGTATATGGATATGTAAGTATGTA-----------------------GATATTTTCGTATTTAGCT-----------------------TGCT----------ATTGAAAGACCATTTCT-TTGCCGTGGCTTT--------------CTC-TGG--------------------------------------------------------------
droKik1 scf7180000302345:21871-21971 - CAGATA-------------------------------------------------------------------------------------------------------------------------------AAACAAGTTTCTTAAAGGACCCAGCAGCCGGCAAAGGAGACTCGTGACACGC---ACTTATGTACATACATATGTACATATGTATGTACATATGTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453809:194322-194413 - TTTGCCAA-TTGAGAAA----------------------------------AAATGTCG------------------------------------------------------------------------------------ATAAAAG-TCGCGC---------AGAATTTTTCA-----CAAATAAATTGAGTATGTATGTATATACATATGTATATATATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491011:433451-433523 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATACATATGTATGTACATATGTACTTGCACATTTGTA-----CATACAAA----------------TCTGGTTCAAG---------AAATGT---------------------------------------------------------------CTCTGAG--------------------------------------------------------------
droRho1 scf7180000778085:87180-87294 + GAGTTATCTTTGTAAATA-------------------------------------------------------------------------------------CATACA--------------------------------------------------------------------------------------------------TATGTATATGCTTACATACATA---------------CACACATACGCCATTGTTTGACTCAGA---------------------------CCTCCAATTTGGCTA--ACTTGATTTGAT--------------TTGCATAGTTCTTGG--------------------------------------------------------------
droBia1 scf7180000301454:29997-30058 - AGT-TGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATGCGGCAAACAATTTGCACACATATAAATATACATATGTACTTATATAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413976:13069-13136 - GAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTATGTACGTACGTACATATGTAAGTGCATAAACTTAACGAGTACGCAGGTATAC-------------------------------ATATGT------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CACGCCCA-CCATCTGCGGCGAGGGCGTAACGGAGTGTTTTGCCAAATCAGGTAAGTCT------------------------------------------------------------------------------------CTAAAGGCTCTCGC---------CAGGTGTCCCATGACTCACTCGAATTACGCATGTAAATATGTACATATGTACATACACAACTACAC-GGCCAAACAGTTGTAG-------------------------------ATAAGTCTCTCAGCCAGTTTCTTTATTGGGCTA--AGTTCA-TTGGT--------------GTGCCTATCTC-CGGGCAGCTGAACACG-----------------------GTGCTCAAGAGCCGATAGCAATAAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................GTAACGGAGTGTTTTGCCAAAT..................................................................................................................................................................................................................................................................................................................................................................................2212.002001000000000000000000010000000000000000000000000000000000000000
..........................GTAACGGAGTGTTTTGCCAAATC.................................................................................................................................................................................................................................................................................................................................................................................2312.002001000000000000000000000000000000000000000000000000000000000010
..........................GTAACGGAGTGTTTTGCCAAATCA................................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000100000000000000000000000000000000000000000000000
......CA-CCATCTGCGGCGAGGGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2112.002000100000000000001000000000000000000000000000000000000000000000
.....CCA-CCATCTGCGGCGAGGGC........................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000000000000000000000000000000000000000000000000000001000
CACGCCCA-CCATCTGCGGC..............................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................AGGGCGTAACGGAGTGTTTTGC.......................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........ATCTGCGGCGAGGGCGTAACGGAGTGT............................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..CGCCCA-CCATCTGCGGCGAGGGC........................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...GCCCA-CCATCTGCGGCGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................GTAACGGAGTGTTTTGCC......................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000100000
....................GAGGGCGTAACGGAGTGT............................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
......CA-CCATCTGCGGCGAGGGC........................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AAACAGTTGTAG-------------------------------ATAAGTCTCTCA..............................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................CGAGGGCGTAACGGAGTG.............................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000010
......................GGGCGTAACGGAGTGTTT..........................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...........ATCTGCGGCGAGGGCGTAAC...................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000100000000000000000000000000000000000000000000000000
......CA-CCATCTGCGGCGAGGGCGTAAC...................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...........ATCTGCGGCGAGGGCGTAACGGA................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.....CCA-CCATCTGCGGCGAGGGCGTAA....................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......CA-CCATCTGCGGCGAGGGCGTA.....................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............GCGGCGAGGGCGTAACGG.................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....CCA-CCATCTGCGGCGAGGGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
....CCCA-CCATCTGCGGCGAGGGCGTA.....................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
..CGCCCA-CCATCTGCGGCGAGGG.........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.............................ACGGAGTGTTTTGCCAAATC.................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........ATCTGCGGCGAGGGCGTAAA...................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
.ACGCCCA-CCATCTGCGGCGAGGGCGT......................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
....CCCA-CCATCTGCGGCGAGGGC........................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
CACATCCC-AAACCTGTACAGATGCTCAAGCCGAATGTTTTGTGAAAACAGGTGAGATACACTCGTTGGGACCCATGAATCATCCACAATTGGGATTGGCGAACACACA--------------------------------------------------------------------------------------------------GCTGTAT-------------------------ATGGTTACAGATAAGTTAATAGTTGGCT-----------------------TACCAAAGTTCTTTATT----------------GGACACAGCTTACTCGGAGCACTTATCTG-CAGCCAGGTGGACAAGCGATAAGAAATGTATTTTCATATACATTTTTGCGCCTACAACGATGAGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............GTACAGATGCTCAAGCCGA................................................................................................................................................................................................................................................................................................................................................................................................1912.002100001
..............TGTACAGATGCTCAAGCCGA................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............CCTGTACAGATGCTCAAGC...................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................AAGCCGAATGTTTTGTGAAAAC.................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.....................ATGCTCAAGCCGAATGTTTTGTGAAAA..................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............CCTGTACAGATGCTCAAGCCGAAT..............................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................TACTCGGAGCACTTATCT...................................................................1811.001100000
.............................................................................................................................................................................................................................................................GTTAATAGTTGGCT-----------------------TACCA...........................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................ACAGCTTACTCGGAGCACTTATCTG-C................................................................2611.001100000
droGri2
CAATCCCA-CCGCATGTCCGGCTGATGTTACCCAGTGTTTTATTCAAACAGGTAAGTCGCCTCCGAT-----------------TTTGGTTTAGGTTAGGTGACTCACAAGTATATATGCCAATAGATAAGTAGGACAAGTTCATTTTAGTACTTATCGG-------------------------------TGTGTGCATGGGTGTGTCTGTATCTGTGTGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCTCAAGTGACGATAACAACAAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CTGTAACT--GCTATATACGAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------CAATGTTTCTTTT----TTTTTATGTATGTATATATGTATGTATGTACATAG---------------------------ATTTTCATTTGGCTTAAATTGTTGCAGTTGCTTCTC--------------------------------------------------------------A-CAG--------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droAna3
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATACATATGTATGTATGTATATACAAAAATACAA-ATGCATACCGCCCTAG-------------------------------TGAAATTAGCCGGTCATAT--------------------------------------------------TTTT-----------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AAT-TATACATATAAATA-------------------------------------------------------------------------------------CATATA----------------------------------------------------------------------------------TATGTATGTATGTATATGGATATGTAAGTATGTA-----------------------GATATTTTCGTATTTAGCT-----------------------TGCT----------ATTGAAAGACCATTTCT-TTGCCGTGGCTTT--------------CTC-TGG--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CAGATA-------------------------------------------------------------------------------------------------------------------------------AAACAAGTTTCTTAAAGGACCCAGCAGCCGGCAAAGGAGACTCGTGACACGC---ACTTATGTACATACATATGTACATATGTATGTACATATGTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTTGCCAA-TTGAGAAA----------------------------------AAATGTCG------------------------------------------------------------------------------------ATAAAAG-TCGCGC---------AGAATTTTTCA-----CAAATAAATTGAGTATGTATGTATATACATATGTATATATATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACATACATATGTATGTACATATGTACTTGCACATTTGTA-----CATACAAA----------------TCTGGTTCAAG---------AAATGT---------------------------------------------------------------CTCTGAG--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GAGTTATCTTTGTAAATA-------------------------------------------------------------------------------------CATACA--------------------------------------------------------------------------------------------------TATGTATATGCTTACATACATA---------------CACACATACGCCATTGTTTGACTCAGA---------------------------CCTCCAATTTGGCTA--ACTTGATTTGAT--------------TTGCATAGTTCTTGG--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGT-TGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATGCGGCAAACAATTTGCACACATATAAATATACATATGTACTTATATAAGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTATGTACGTACGTACATATGTAAGTGCATAAACTTAACGAGTACGCAGGTATAC-------------------------------ATATGT------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/19/2015 at 05:25 PM