ID:

dvi_11798

 Coordinate:

scaffold_12963:14281147-14281297 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ17530-cds]; exon [dvir_GLEANR_2116:10]; intron [Dvir\GJ17530-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATGCTGTCAAAAAAACCTGTGTTGGAAAAAAATATGAAGAATTTCCGCAGGTAAGATATAGTGGTAATTTCTTTCTTTCACAAAGTATTGTTTATGGAGCTCCCAAAAGCGTTCGTGATCTGGGGCAATTAAATGCCGATCTAAAGATTTCCTGAAGCCCGCGCCGACTTTCCGCCACAAACACATTTCTTTGCCCCTACACCCATTGGGAACATTTCGGAAACATTTCGGAAAATAAACTTTCGAACAAT
**************************************************....(((((.((((.............))))...)))))..((((((((((......))).)))))))...(((((((..(((((..((((....)))).......((....))((......)).........)))))..)))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 SRR1106728
larvae
 V053
head
 V047
embryo
 SRR060684
140x9_0-2h_embryos_total
..GCTGTCAAAAAAACCTGTGTTGGA................................................................................................................................................................................................................................. 24 0 1 9.00 9 6 1 0 1 1 0 0 0 0 0 0 0 0 0
..........................AAAAAATATGAAGAATTTCCGCA.......................................................................................................................................................................................................... 23 0 1 5.00 5 2 1 0 0 0 1 1 0 0 0 0 0 0 0
.........AAAAAACCTGTGTTGGAAAA.............................................................................................................................................................................................................................. 20 0 1 5.00 5 4 0 1 0 0 0 0 0 0 0 0 0 0 0
..GCTGTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 25 0 1 4.00 4 2 0 0 0 1 0 0 1 0 0 0 0 0 0
..........AAAAACCTGTGTTGGAAAAAA............................................................................................................................................................................................................................ 21 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0
........AAAAAAACCTGTGTTGGA................................................................................................................................................................................................................................. 18 0 1 4.00 4 3 0 1 0 0 0 0 0 0 0 0 0 0 0
.........AAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 18 0 1 4.00 4 1 2 0 0 1 0 0 0 0 0 0 0 0 0
....TGTCAAAAAAACCTGTGTTGGA................................................................................................................................................................................................................................. 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..GCTGTCAAAAAAACCTGTGTTGGAAA............................................................................................................................................................................................................................... 26 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0 0
.........AAAAAACCTGTGTTGGAAAAA............................................................................................................................................................................................................................. 21 0 1 3.00 3 1 1 0 0 0 0 1 0 0 0 0 0 0 0
...........AAAACCTGTGTTGGAAAAA............................................................................................................................................................................................................................. 19 0 1 3.00 3 2 0 0 0 0 0 0 0 1 0 0 0 0 0
............AAACCTGTGTTGGAAAAA............................................................................................................................................................................................................................. 18 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0
............AAACCTGTGTTGGAAAAAAATATGAA..................................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0 0 0 0
..GCTGTCAAAAAAACCTGTGTTG................................................................................................................................................................................................................................... 22 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0
.TGCTGTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AAAAACCTGTGTTGGAAAAA............................................................................................................................................................................................................................. 20 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....GTCAAAAAAACCTGTGTTGGA................................................................................................................................................................................................................................. 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........AAAAAAACCTGTGTTGGAAAAA............................................................................................................................................................................................................................. 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......CAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................AAAAATATGAAGAATTTCCGCA.......................................................................................................................................................................................................... 22 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........AAAAAACCTGTGTTGGAAAAAAA........................................................................................................................................................................................................................... 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................AAATATGAAGAATTTCCGCA.......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAAACCTGTGTTGGAAAAAAATA......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....TGTCAAAAAAACCTGTGTTGGAAAA.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...........AAAACCTGTGTTGGAAAAAAA........................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........AAAACCTGTGTGGGAAAAA............................................................................................................................................................................................................................. 19 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..................GTGTTGGAAAAAAATATGAAG.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............AAACCTGTGTTGGAAAAAAATAT........................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
ATGCTGTCAAAAAAACCTGTGT..................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..........AAAAACCTGTGTTGGAAA............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.........................AAAAAAATATGAAGAATTTCCGC........................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........AAAAAAACCTGTGTTGGAAAAAAATAT........................................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................GAAGAATTTCCGCAGGCAAT.................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
ATGCTGTCAAAAAAACCTGTGTTGGA................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...CTGTCAAAAAAACCTGTGT..................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........AAAAACCTGTGTTGGAAAAAAAT.......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................ATATGAAGAATTTCCGCAGGCAAT.................................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAAACCTGTGTTGAAAAAAAA........................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................AAAATATGAAGAATTTCCGCA.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................CTGTGTTGGAAAAAAATATG....................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........AAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAAACCTGTGTTGGAAAAAAATATGAAG.................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........AAAAAAACCTGTGTTGGAAAAAA............................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................AAAAAATATGAAGAATTTCCGC........................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...CTGTCAAAAAAACCTGTGTTGGAAAA.............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAAACCTGTGTTGGAAAA.............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...CTGTCAAAAAAACCTGTGTTGGAAA............................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....TGTCAAAAAAACCTGTGTTGGAAA............................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.TGATGTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AAAACCTGTGTTGGAAAAAA............................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........AAAAAAACCTGTGTTGGAAAAAAATATG....................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....TGTCAAAAAAACCTGTGTTGGAAAAA............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AAAAAACCTGTGTTGGAAAAAAATATGA...................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........AAAAACCTGTGTTGGAAAA.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...CCGTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...CTGTCAAAAAAACCTGTGTTGGA................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............ACCTGTGTTGGAAAAAAATA......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................GAAAAAAATATGAAGAATTTCC............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................AGAGGATTGTTTATGGAGCT...................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................CTACACCCGTTGTGAAC...................................... 17 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..................GGGATGGAAAAAAATATGGAG.................................................................................................................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................CGCCACAACCACATATCGTT........................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................GTTGGTGATCTGGCACAATT......................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................AAGATATTCTGGTAATTT..................................................................................................................................................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................GTTGGTGATCTGGCACAAT.......................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TACGACAGTTTTTTTGGACACAACCTTTTTTTATACTTCTTAAAGGCGTCCATTCTATATCACCATTAAAGAAAGAAAGTGTTTCATAACAAATACCTCGAGGGTTTTCGCAAGCACTAGACCCCGTTAATTTACGGCTAGATTTCTAAAGGACTTCGGGCGCGGCTGAAAGGCGGTGTTTGTGTAAAGAAACGGGGATGTGGGTAACCCTTGTAAAGCCTTTGTAAAGCCTTTTATTTGAAAGCTTGTTA
**************************************************....(((((.((((.............))))...)))))..((((((((((......))).)))))))...(((((((..(((((..((((....)))).......((....))((......)).........)))))..)))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 V116
male body		 GSM1528803
follicle cells		 M061
embryo
 SRR060673
9_ovaries_total
 SRR060676
9xArg_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060672
9x160_females_carcasses_total
 M027
male body		 M028
head
 SRR060663
160_0-2h_embryos_total
 SRR060666
160_males_carcasses_total
 SRR1106729
mixed whole adult body
 SRR060668
160x9_males_carcasses_total
 SRR060657
140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060670
9_testes_total
...........................................................................................................................................................................................AGAAGCGGGGATATGGGT.............................................. 18 2 2 7.00 14 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GGCTAGAGTTCTAAATGTC................................................................................................. 19 3 18 4.06 73 3 52 0 0 0 0 1 1 5 5 2 0 0 0 1 1 1 1 0
................................................................................................CTAGCGGGTTTTCGCAAGCAC...................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGTGGGTAACCCTTGTAAAGCCTTTGT.......................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............TTGGACACAACCTTTTTTTATACTTCT................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGGTGTTTGTGTAAAGAAA........................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGGCTAGAGTTCTAAATGTC................................................................................................. 20 3 6 0.50 3 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TAAAGAGACGGAGATGTGG................................................ 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................ACCCTTTTTTATAATTCTTAAA............................................................................................................................................................................................................... 22 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................ACCCTTTTTTATACTTATTAA................................................................................................................................................................................................................ 21 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AGAAACGGGGATATGGGTT............................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AAGCGGGGATATGGGTATCC.......................................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AACCATTTTTTATAATTATTAAA............................................................................................................................................................................................................... 23 3 20 0.30 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GAAGAAGCGGGGATTTGGGT.............................................. 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AGCGGGGATATGGGTAAC........................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................TTCCTAAGCACTGGACCCC.............................................................................................................................. 19 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................TTCGGGCGCGGCGGA.................................................................................. 15 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................AAGCGGGGATATGGGTAATC.......................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................GGGCTAGAGTTCTAAATGAC................................................................................................. 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AGCGGGGATATGGGTATCC.......................................... 19 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTAAAGCCTTCAATTTG........... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................TAGAGAAACAAAGTGGTTCA..................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................TAAAGAGACGGAGATGTGGT............................................... 20 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CAGAAACGGGGATATGGGTT............................................. 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................CACCATTAAAGAAAGCACAT........................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AGAAACGGGGATATGGGTTT............................................ 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AAGCGGGGATATGGGTATC........................................... 19 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TCTTTTGGCGACAACCTTTT.............................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................AAGCGGGGATATGGGTAA............................................ 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GGCTAGAATTCTAAATGTC................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AAGCGGGGATATGGGTAAAC.......................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:14281097-14281347 + dvi_11798 ATGCTGTCAAAAAAACCTGTGTTGGAAAAAAATATGAAGAATTTCCGCAGGTAAGATATAGTGGTAATTTCTTTCTTTCACAAAGTATTGTTTATGGAGCTCCCAAAAGCGTTCGTGATCTGGGGCAATTAAATGCCGATCTAAAGATTTCCTGAAGCCCGCGCCGACTTTCCGCCACAAACACATTTCTTTGCCCCTACACCCATTGGGAACATTTCGGAAACATTTCGGAAAATAAACTTTCGAACAAT
droMoj3 scaffold_6500:30783420-30783479 + ATGCTGTTAAAAAAACCTGTGTGGGAAAAAAATATGAAGAATTTCCACAAGTAAGACTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:1590085-1590143 - ATGCTGTTAAAAAAACATGCGTAGGAAAGAAATACGATGATTTTCCCCAGGTAAGAGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004965:404077-404153 + ACGCTGTAAAAAAAACGTGCGTGGGAAAAAAATATGAAGAATTTCCACAGGTAAGAAATA---------TCTTAACTTAACAAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_418:3620-3675 + ATGCGGTCAAGAAAACTTGTGTGGGCAAAAAGTATGAAGAATTCCCCCAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_70:278662-278717 + ATGCGGTCAAGAAAACTTGTGTGGGCAAAAAGTATGAAGAATTCCCCCAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13230:3422679-3422733 - ATGCGGTTAAAAAAACATGTGTTGGAAAAAAATACGAGGAATTTCCACAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396712:3223918-3223995 - ATGCGGTAAAGAAAACATGTGTTGGCAAAAAATACGAGGAATTTCCACAGGTGAGTTTGATTAATAAATTTTGTTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302657:113263-113318 - ATGCTGTAAAAAAAACATGTGTCGGCAAAAACTATGATGAATTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453312:21311-21365 + ATGCAGTAA-AAAAACATGCGTGGGGAAAAAATACGAGGAATTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491092:13291-13346 - ATGCAGTAAAAAAAACTTGTGTGGGCAAAAAGTACGAGGAGTTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777675:3663-3733 + ACGCAGTTAAAAAAACATGTGTGGGCAAAAAATACGAGGAATTTCCACAGGTAAGAAAAG-------AGTCTAGTGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302490:30571-30629 - ATGCAGTAAAAAAAACTTGTGTGGGTAAAAAATACGAAGAATTTCCACAGGTAAGAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414497:14439-14494 - ATGCAGTAAAAAAAACATGTGTTGGCAAAAAATATGAGGAGTTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000405472:41405-41459 - ATGCAGTAAAAAAAACATGTGTTGGCAAAAAGTATGAAGAATTTCCACAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2RHet:1729956-1730015 - ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 node_1389:1606-1676 - ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACCAA-------TATCTTTGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_168:4809-4879 + ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGGCCAA-------TATCTTTGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 chr2h:491190-491249 - ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:23704735-23704793 - ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATGCTGTCAAAAAAACCTGTGTTGGAAAAAAATATGAAGAATTTCCGCAGGTAAGATATAGTGGTAATTTCTTTCTTTCACAAAGTATTGTTTATGGAGCTCCCAAAAGCGTTCGTGATCTGGGGCAATTAAATGCCGATCTAAAGATTTCCTGAAGCCCGCGCCGACTTTCCGCCACAAACACATTTCTTTGCCCCTACACCCATTGGGAACATTTCGGAAACATTTCGGAAAATAAACTTTCGAACAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..GCTGTCAAAAAAACCTGTGTTGGA.................................................................................................................................................................................................................................2419.009000000000000000106110000000000000000000000000000000000000000000
..........................AAAAAATATGAAGAATTTCCGCA..........................................................................................................................................................................................................2315.005000000000000001002100100000000000000000000000000000000000000000
.........AAAAAACCTGTGTTGGAAAA..............................................................................................................................................................................................................................2015.005000000000000000014000000000000000000000000000000000000000000000
..GCTGTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................2514.004000000000000000002010010000000000000000000000000000000000000000
..........AAAAACCTGTGTTGGAAAAAA............................................................................................................................................................................................................................2114.004000000000000000003100000000000000000000000000000000000000000000
........AAAAAAACCTGTGTTGGA.................................................................................................................................................................................................................................1814.004000000000000000013000000000000000000000000000000000000000000000
.........AAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................1814.004000000000000000001210000000000000000000000000000000000000000000
....TGTCAAAAAAACCTGTGTTGGA.................................................................................................................................................................................................................................2213.003000000000000000003000000000000000000000000000000000000000000000
..GCTGTCAAAAAAACCTGTGTTGGAAA...............................................................................................................................................................................................................................2613.003000000000000000101100000000000000000000000000000000000000000000
.........AAAAAACCTGTGTTGGAAAAA.............................................................................................................................................................................................................................2113.003000000000000000001100100000000000000000000000000000000000000000
...........AAAACCTGTGTTGGAAAAA.............................................................................................................................................................................................................................1913.003001000000000000002000000000000000000000000000000000000000000000
............AAACCTGTGTTGGAAAAA.............................................................................................................................................................................................................................1813.003000000000000000002100000000000000000000000000000000000000000000
............AAACCTGTGTTGGAAAAAAATATGAA.....................................................................................................................................................................................................................2612.002000000000000000010010000000000000000000000000000000000000000000
..GCTGTCAAAAAAACCTGTGTTG...................................................................................................................................................................................................................................2212.002000000000000000100100000000000000000000000000000000000000000000
.TGCTGTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................2612.002000000000000000002000000000000000000000000000000000000000000000
..........AAAAACCTGTGTTGGAAAAA.............................................................................................................................................................................................................................2012.002000000000000000001010000000000000000000000000000000000000000000
.....GTCAAAAAAACCTGTGTTGGA.................................................................................................................................................................................................................................2112.002000000000000000001100000000000000000000000000000000000000000000
........AAAAAAACCTGTGTTGGAAAAA.............................................................................................................................................................................................................................2212.002000000000000000001100000000000000000000000000000000000000000000
.......CAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................2012.002000000000000000001100000000000000000000000000000000000000000000
...........................AAAAATATGAAGAATTTCCGCA..........................................................................................................................................................................................................2212.002000000000000000001100000000000000000000000000000000000000000000
.........AAAAAACCTGTGTTGGAAAAAAA...........................................................................................................................................................................................................................2312.002000000000000000001100000000000000000000000000000000000000000000
.............................AAATATGAAGAATTTCCGCA..........................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........AAAACCTGTGTTGGAAAAAAATA.........................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
....TGTCAAAAAAACCTGTGTTGGAAAA..............................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
...........AAAACCTGTGTTGGAAAAAAA...........................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..................GTGTTGGAAAAAAATATGAAG....................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
............AAACCTGTGTTGGAAAAAAATAT........................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
ATGCTGTCAAAAAAACCTGTGT.....................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
..........AAAAACCTGTGTTGGAAA...............................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
.........................AAAAAAATATGAAGAATTTCCGC...........................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
........AAAAAAACCTGTGTTGGAAAAAAATAT........................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
ATGCTGTCAAAAAAACCTGTGTTGGA.................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
...CTGTCAAAAAAACCTGTGT.....................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..........AAAAACCTGTGTTGGAAAAAAAT..........................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
............................AAAATATGAAGAATTTCCGCA..........................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
................CTGTGTTGGAAAAAAATATG.......................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
........AAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...........AAAACCTGTGTTGGAAAAAAATATGAAG....................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
........AAAAAAACCTGTGTTGGAAAAAA............................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
..........................AAAAAATATGAAGAATTTCCGC...........................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
...CTGTCAAAAAAACCTGTGTTGGAAAA..............................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
...........AAAACCTGTGTTGGAAAA..............................................................................................................................................................................................................................1811.001000000000000000000100000000000000000000000000000000000000000000
...CTGTCAAAAAAACCTGTGTTGGAAA...............................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
....TGTCAAAAAAACCTGTGTTGGAAA...............................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...........AAAACCTGTGTTGGAAAAAA............................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
........AAAAAAACCTGTGTTGGAAAAAAATATG.......................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
....TGTCAAAAAAACCTGTGTTGGAAAAA.............................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.........AAAAAACCTGTGTTGGAAAAAAATATGA......................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
..........AAAAACCTGTGTTGGAAAA..............................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
...CTGTCAAAAAAACCTGTGTTGGA.................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
.....GTCAAAAAAACCTGTGTTGGAA................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..............ACCTGTGTTGGAAAAAAATA.........................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
........................GAAAAAAATATGAAGAATTTCC.............................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
ATGCTGTTAAAAAAACCTGTGTGGGAAAAAAATATGAAGAATTTCCACAAGTAAGACTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....GTTAAAAAAACCTGTGTGGGA.................................................................................................................................................................................................................................2111.001100000
droGri2
ATGCTGTTAAAAAAACATGCGTAGGAAAGAAATACGATGATTTTCCCCAGGTAAGAGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............AAACATGCGTAGGAAAGA.............................................................................................................................................................................................................................1811.00110
droWil2
ACGCTGTAAAAAAAACGTGCGTGGGAAAAAAATATGAAGAATTTCCACAGGTAAGAAATA---------TCTTAACTTAACAAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........AAAAAAACGTGCGTGGGAA................................................................................................................................................................................................................................1911.00100100
.........AAAAAACGTGCGTGGGAAAAAAATAT........................................................................................................................................................................................................................2611.00100100
...CTGTAAAAAAAACGTGCGTGGGAAAA..............................................................................................................................................................................................................................2611.00101000
..........AAAAACGTGCGTGGGAAAAA.............................................................................................................................................................................................................................2011.00101000
.......AAAAAAAACGTGCGTGGGAAAAAAATA.........................................................................................................................................................................................................................2711.00100100
........AAAAAAACGTGCGTGGGAAAAA.............................................................................................................................................................................................................................2211.00100100
........AAAAAAACGTGCGTGGGAAAAAA............................................................................................................................................................................................................................2311.00100100
.....GTAAAAAAAACGTGCGTGGGAA................................................................................................................................................................................................................................2211.00101000
..........AAAAACGTGCGTGGGAAAAAA............................................................................................................................................................................................................................2111.00100100
dp5
ATGCGGTCAAGAAAACTTGTGTGGGCAAAAAGTATGAAGAATTCCCCCAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........AAAACTTGTGTGGGCAAAAAGTA.........................................................................................................................................................................................................................2312.0020000000020
........AAGAAAACTTGTGTGGGCAAA..............................................................................................................................................................................................................................2112.0020100001000
....................GTGGGCAAAAAGTATGAAGAA..................................................................................................................................................................................................................2112.0020000002000
...............CTTGTGTGGGCAAAAAGTA.........................................................................................................................................................................................................................1911.0010100000000
.............................AAGTATGAAGAATTCCCCCA..........................................................................................................................................................................................................2011.0010100000000
...........AAAACTTGTGTGGGCAAAAAGTATG.......................................................................................................................................................................................................................2511.0010000010000
........AAGAAAACTTGTGTGGGCA................................................................................................................................................................................................................................1911.0010100000000
................TTGTGTGGGCAAAAAGTATGAAGAA..................................................................................................................................................................................................................2511.0010000000010
................TTGTGTGGGCAAAAAGTATGA......................................................................................................................................................................................................................2111.0010000000010
........AAGAAAACTTGTGTGGGCAA...............................................................................................................................................................................................................................2011.0011000000000
...............CTTGTGTGGGCAAAAAGTATGAAGAATTC...............................................................................................................................................................................................................2911.0010001000000
.........AGAAAACTTGTGTGGGCAAAAAGTATG.......................................................................................................................................................................................................................2711.0010000001000
.....................TGGGCAAAAAGTATGAAGAAT.................................................................................................................................................................................................................2111.0010000001000
.....GTCAAGAAAACTTGTGTGGGCA................................................................................................................................................................................................................................2211.0010000001000
..GCGGTCAAGAAAACTTGTGT.....................................................................................................................................................................................................................................2011.0010100000000
..................GTGTGGGCAAAAAGTATGAAGAATT................................................................................................................................................................................................................2511.0010100000000
...........................AAAAGTATGAAGAATTCCCCC...........................................................................................................................................................................................................2111.0010001000000
..............ACTTGTGTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................2511.0010100000000
droPer2
ATGCGGTCAAGAAAACTTGTGTGGGCAAAAAGTATGAAGAATTCCCCCAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........GAAAACTTGTGTGGGCAAA..............................................................................................................................................................................................................................19120.00200000020
........AAGAAAACTTGTGTGGGCA................................................................................................................................................................................................................................1919.009000009
..........GAAAACTTGTGTGGGCAAAAA............................................................................................................................................................................................................................2119.009000009
................TTGTGTGGGCAAAAAGTATG.......................................................................................................................................................................................................................2018.008000008
..........GAAAACTTGTGTGGGCAAAA.............................................................................................................................................................................................................................2016.006010005
........AAGAAAACTTGTGTGGGCAA...............................................................................................................................................................................................................................2016.006000006
.................TGTGTGGGCAAAAAGTATG.......................................................................................................................................................................................................................1915.005010004
........AAGAAAACTTGTGTGGGCAAA..............................................................................................................................................................................................................................2115.005000005
.........AGAAAACTTGTGTGGGCAA...............................................................................................................................................................................................................................1915.005000005
................TTGTGTGGGCAAAAAGTATGAA.....................................................................................................................................................................................................................2215.005000005
............AAACTTGTGTGGGCAAAAA............................................................................................................................................................................................................................1914.004000004
..................GTGTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................2114.004000004
....................GTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................1914.004000004
............AAACTTGTGTGGGCAAAAAG...........................................................................................................................................................................................................................2013.003000003
...........AAAACTTGTGTGGGCAAAAA............................................................................................................................................................................................................................2013.003000003
.....GTCAAGAAAACTTGTGTGGGCA................................................................................................................................................................................................................................2213.003000003
...............CTTGTGTGGGCAAAAAGTATGAA.....................................................................................................................................................................................................................2313.003000003
...............CTTGTGTGGGCAAAAAGTATG.......................................................................................................................................................................................................................2113.003000003
.............AACTTGTGTGGGCAAAAAGTATGAA.....................................................................................................................................................................................................................2512.002000002
.................TGTGTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................2212.002000002
.............AACTTGTGTGGGCAAAAAGTATG.......................................................................................................................................................................................................................2312.002000002
.........AGAAAACTTGTGTGGGCA................................................................................................................................................................................................................................1812.002000002
................TTGTGTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................2312.002000002
..........GAAAACTTGTGTGGGCAAAAAGT..........................................................................................................................................................................................................................2312.002000002
........AAGAAAACTTGTGTGGGCAAAA.............................................................................................................................................................................................................................2212.002000011
........AAGAAAACTTGTGTGGGCAAAAA............................................................................................................................................................................................................................2312.002000002
..........GAAAACTTGTGTGGGCAAAAAG...........................................................................................................................................................................................................................2212.002000002
.........AGAAAACTTGTGTGGGCAAA..............................................................................................................................................................................................................................2012.002000002
.............AACTTGTGTGGGCAAAAAGTATGAAGA...................................................................................................................................................................................................................2712.002000002
.............AACTTGTGTGGGCAAAAAGTATGAAGAA..................................................................................................................................................................................................................2812.002000002
.................TGTGTGGGCAAAAAGTATGAA.....................................................................................................................................................................................................................2111.001000001
.....................TGGGCAAAAAGTATGAAGAATT................................................................................................................................................................................................................2211.001000001
...............CTTGTGTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................2411.001000001
.............AACTTGTGTGGGCAAAAAG...........................................................................................................................................................................................................................1911.001000001
.................TGTGTGGGCAAAAAGTATGA......................................................................................................................................................................................................................2011.001000001
...........AAAACTTGTGTGGGCAAAAAG...........................................................................................................................................................................................................................2111.001000001
..GCGGTCAAGAAAACTTGTGTGGGCA................................................................................................................................................................................................................................2511.001010000
............AAACTTGTGTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................2711.001000001
........AAGAAAACTTGTGTGGGCAAAAAGTA.........................................................................................................................................................................................................................2611.001000001
...............CTTGTGTGGGCAAAAAGTATGA......................................................................................................................................................................................................................2211.001000001
................TTGTGTGGGCAAAAAGTAT........................................................................................................................................................................................................................1911.001000001
...........AAAACTTGTGTGGGCAAAA.............................................................................................................................................................................................................................1911.001000001
...........................AAAAGTATGAAGAATTCCCC............................................................................................................................................................................................................2011.001000001
............AAACTTGTGTGGGCAAAAAGTATGAA.....................................................................................................................................................................................................................2611.001000001
.............AACTTGTGTGGGCAAAAAGTA.........................................................................................................................................................................................................................2111.001000001
...........AAAACTTGTGTGGGCAAAAAGTATGAAG....................................................................................................................................................................................................................2811.001000001
.........AGAAAACTTGTGTGGGCAAAAAG...........................................................................................................................................................................................................................2311.001000001
......................GGGCAAAAAGTATGAAGAA..................................................................................................................................................................................................................1911.001000001
..............ACTTGTGTGGGCAAAAAGTATGAA.....................................................................................................................................................................................................................2411.001000001
..........GAAAACTTGTGTGGGCAA...............................................................................................................................................................................................................................1811.001010000
...............CTTGTGTGGGCAAAAAGTA.........................................................................................................................................................................................................................1911.001000001
.......CAAGAAAACTTGTGTGGGCAA...............................................................................................................................................................................................................................2111.001000001
............AAACTTGTGTGGGCAAAAAGTATGAAGA...................................................................................................................................................................................................................2811.001000001
.............AACTTGTGTGGGCAAAAAGT..........................................................................................................................................................................................................................2011.001000001
..........GAAAACTTGTGTGGGCAAAAAGTATGAA.....................................................................................................................................................................................................................2811.001000001
ATGCGGTCAAGAAAACTTGTGTGGGCA................................................................................................................................................................................................................................2711.001000001
.................TGTGTGGGCAAAAAGTATGAAGA...................................................................................................................................................................................................................2311.001000001
.........AGAAAACTTGTGTGGGCAAAAAGTATG.......................................................................................................................................................................................................................2711.001000001
.......CAAGAAAACTTGTGTGGGCAAA..............................................................................................................................................................................................................................2211.001000001
droAna3
ATGCGGTTAAAAAAACATGTGTTGGAAAAAAATACGAGGAATTTCCACAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................GTGTTGGAAAAAAATACGAGGAATTTC..............................................................................................................................................................................................................2711.001100000
............................AAAATACGAGGAATTTCCACAGGC.......................................................................................................................................................................................................2411.001000001
droBip1
ATGCGGTAAAGAAAACATGTGTTGGCAAAAAATACGAGGAATTTCCACAGGTGAGTTTGATTAATAAATTTTGTTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ATGCTGTAAAAAAAACATGTGTCGGCAAAAACTATGATGAATTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATGCAGTAA-AAAAACATGCGTGGGGAAAAAATACGAGGAATTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATGCAGTAAAAAAAACTTGTGTGGGCAAAAAGTACGAGGAGTTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACGCAGTTAAAAAAACATGTGTGGGCAAAAAATACGAGGAATTTCCACAGGTAAGAAAAG-------AGTCTAGTGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATGCAGTAAAAAAAACTTGTGTGGGTAAAAAATACGAAGAATTTCCACAGGTAAGAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATGCAGTAAAAAAAACATGTGTTGGCAAAAAATATGAGGAGTTTCCACAGGTAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ATGCAGTAAAAAAAACATGTGTTGGCAAAAAGTATGAAGAATTTCCACAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........AAAACATGTGTGGGTAAA..............................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGTGTGGGTAAAAAGTACGAAGAATT................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000
................................TACGAAGAATTTCCACAGGTAAGACC.................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAAAAGTACGAAGAATTTCCACAGG........................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TACGAAGAATTTCCACAGGTAAGACCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........AAAACATGTGTGGGTAAAA.............................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
..............ACATGTGTGGGTAAAAAGTACGAAGAA..................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.................TGTGTGGGTAAAAAGTACGAAGAA..................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTGTGGGTAAAAAGTACG.......................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AACATGTGTGGGTAAAAAGTACG.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............AAACATGTGTGGGTAAAAAGTA.........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGTGTGGGTAAAAAGTACGA......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AAACATGTGTGGGTAAAAAGTACG.......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTGGGTAAAAAGTACGAAGAATT................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAAAAACATGTGTGGGTAAAAAGTAC........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACATGTGTGGGTAAAAAG...........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGTGTGGGTAAAAAGTACGAAGAATTTC..............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGTAAAAAAAACATGTGT.....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TGCTGTAAAAAAAACATGTGTGGGTA................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ACATGTGTGGGTAAAAAGTACGAA.....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TAAAAAAAACATGTGTGGGTAAAAAG...........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGGGTAAAAAGTACGAAGAATTTCCA............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAAAAAACATGTGTGGGT.................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................TGTGTGGGTAAAAAGTACGAAG....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............ACATGTGTGGGTAAAAAGTACG.......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACCAA-------TATCTTTGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................TGTGTGGGTAAAAAGTACGAAGAA..................................................................................................................................................................................................................2411.00100000001000000000
droSec2
ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGGCCAA-------TATCTTTGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..GCTGTAAAAAAAACATGTGTGGGT.................................................................................................................................................................................................................................2411.0010100
..............ACATGTGTGGGTAAAAAG...........................................................................................................................................................................................................................1811.0011000
droYak3
ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........AAAAACATGTGTGGGTAAAA.............................................................................................................................................................................................................................2012.00201000010000
..............ACATGTGTGGGTAAAAAGTACGAAG....................................................................................................................................................................................................................2512.00200000020000
..............ACATGTGTGGGTAAAAAGTACG.......................................................................................................................................................................................................................2212.00202000000000
................ATGTGTGGGTAAAAAGTACGA......................................................................................................................................................................................................................2112.00201000010000
...............................GTACGAAGAATTTCCACAGGACG.....................................................................................................................................................................................................2311.00101000000000
.............................AAGTACGAAGAATTTCCACA..........................................................................................................................................................................................................2011.00101000000000
.................TGTGTGGGTAAAAAGTACGAAGAATT................................................................................................................................................................................................................2611.00100000010000
..............................AGTACGAAGAATTTCCACA..........................................................................................................................................................................................................1911.00101000000000
............AAACATGTGTGGGTAAAAAGT..........................................................................................................................................................................................................................2111.00101000000000
............AAACATGTGTGGGTAAAA.............................................................................................................................................................................................................................1811.00101000000000
.TGCTGTAAAAAAAACATGTGTGGGTAA...............................................................................................................................................................................................................................2711.00101000000000
.............AACATGTGTGGGTAAAAAGTACGAAG....................................................................................................................................................................................................................2611.00101000000000
..GCTGTAAAAAAAACATGTGTGGGTAA...............................................................................................................................................................................................................................2611.00100000010000
...........AAAACATGTGTGGGTAAAAAGTACGAA.....................................................................................................................................................................................................................2711.00101000000000
....................GTGGGTAAAAAGTACGAAGA...................................................................................................................................................................................................................2011.00101000000000
...............CATGTGTGGGTAAAAAGTACGAAGA...................................................................................................................................................................................................................2511.00101000000000
.............................AAGTACGAAGAATTTCCACAGGC.......................................................................................................................................................................................................2311.00100000010000
...............................GTACGAAGAATTTCCACAGGC.......................................................................................................................................................................................................2111.00101000000000
................ATGTGTGGGTAAAAAGTACG.......................................................................................................................................................................................................................2011.00101000000000
.................TGTGTGGGTAAAAAGTACGAAGA...................................................................................................................................................................................................................2311.00101000000000
droEre2
ATGCTGTAAAAAAAACATGTGTGGGTAAAAAGTACGAAGAATTTCCACAGGTAAGACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................TGTGTGGGTAAAAAGTACGAAG....................................................................................................................................................................................................................2212.0020000200
.........................TAAAAAGTACGAAGAATTTCCACAGGC.......................................................................................................................................................................................................2711.0010000010
..............ACATGTGTGGGTAAAAAGTACGAAG....................................................................................................................................................................................................................2511.0010000100
...........AAAACATGTGTGGGTAAAAAGTACGAA.....................................................................................................................................................................................................................2711.0010000100
...........AAAACATGTGTGGGTAAAAA............................................................................................................................................................................................................................2011.0010000100
...............CATGTGTGGGTAAAAAGTA.........................................................................................................................................................................................................................1911.0010000100
...........AAAACATGTGTGGGTAAAAAG...........................................................................................................................................................................................................................2111.0010000100
...............CATGTGTGGGTAAAAAGTAC........................................................................................................................................................................................................................2011.0010000100
............AAACATGTGTGGGTAAAAAGTACGAA.....................................................................................................................................................................................................................2611.0010000100
..........AAAAACATGTGTGGGTAAA..............................................................................................................................................................................................................................1911.0010000100
.............AACATGTGTGGGTAAAAA............................................................................................................................................................................................................................1811.0010000100
.............AACATGTGTGGGTAAAAAGTACG.......................................................................................................................................................................................................................2311.0010000100
...CTGTAAAAAAAACATGTGTGGGTAAAA.............................................................................................................................................................................................................................2711.0011000000

Generated: 05/16/2015 at 09:22 PM