ID:

dvi_11453

Coordinate:

scaffold_12963:12329665-12329815 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.6 -9.4 -9.4

Flybase annnotation

CDS [Dvir\GJ23128-cds]; exon [dvir_GLEANR_849:2]; intron [Dvir\GJ23128-in]

Repeatable elements

NameClassFamilyStrand
DMR_DVUnknownUnknown+
mature
  1. scaffold_9572:1690-1714 -
  2. scaffold_12164:406-430 +
  3. scaffold_12822:2925867-2925891 -
  4. dvi_11453  scaffold_12963:12329757-12329781 -
  5. scaffold_13049:16937087-16937111 +
star
  1. scaffold_761:2043-2063 +
  2. scaffold_10279:401-421 +
  3. scaffold_10442:320-340 +
  4. scaffold_10442:731-751 +
  5. scaffold_12527:425-445 +
  6. scaffold_12527:2150-2170 +
  7. scaffold_12527:2620-2640 +
  8. scaffold_12822:4006459-4006479 +
  9. scaffold_12822:4011670-4011690 +
  10. scaffold_12875:8003485-8003505 +
  11. scaffold_12875:8004030-8004050 +
  12. scaffold_12875:8004357-8004377 +
  13. scaffold_12875:12214476-12214496 +
  14. scaffold_12963:9462249-9462269 +
  15. scaffold_12963:9465401-9465421 +
  16. scaffold_12963:9467204-9467224 +
  17. scaffold_13047:17332695-17332715 +
  18. scaffold_13047:17333268-17333288 +
  19. scaffold_13047:17333726-17333746 +
  20. scaffold_13047:17334617-17334637 +
  21. scaffold_171:29-49 +
  22. scaffold_171:833-853 +
  23. scaffold_626:369-389 +
  24. scaffold_1009:1025-1045 +
  25. scaffold_1009:1173-1193 +
  26. scaffold_7486:4-24 +
  27. scaffold_9580:1904-1924 +
  28. scaffold_9764:3052-3072 +
  29. scaffold_12822:2270171-2270191 +
  30. scaffold_12822:4007783-4007803 +
  31. scaffold_12822:4008355-4008375 +
  32. scaffold_12822:4010775-4010795 +
  33. scaffold_12855:1118-1138 +
  34. dvi_24094  scaffold_12963:13157744-13157764 +
  35. scaffold_12963:18518808-18518828 +
  36. scaffold_13042:2872857-2872877 +
  37. scaffold_13047:3001343-3001363 +
  38. scaffold_13047:14302173-14302193 +
  39. scaffold_13047:17908456-17908476 +
  40. scaffold_13246:958754-958774 +
  41. scaffold_510:514-534 -
  42. dvi_23860  scaffold_510:809-829 -
  43. scaffold_510:1104-1124 -
  44. scaffold_7159:1150-1170 -
  45. scaffold_7842:871-891 -
  46. scaffold_7842:1116-1136 -
  47. scaffold_9572:1646-1666 -
  48. scaffold_9724:6307-6327 -
  49. scaffold_9847:7623-7643 -
  50. scaffold_12473:7277-7297 -
  51. scaffold_12928:6784279-6784299 -
  52. scaffold_12954:1305490-1305510 -
  53. scaffold_12963:12328165-12328185 -
  54. dvi_11453  scaffold_12963:12329713-12329733 -
  55. scaffold_12963:12332186-12332206 -
  56. scaffold_13042:1038120-1038140 -
  57. scaffold_13047:1599345-1599365 -
  58. scaffold_13047:1631665-1631685 -
  59. scaffold_13047:11993823-11993843 -
  60. scaffold_13209:697-717 -
  61. scaffold_4728:5371-5391 +
  62. scaffold_12963:9458649-9458669 +
  63. scaffold_12963:9463423-9463443 +
  64. scaffold_12963:9907962-9907982 +
  65. scaffold_12963:9924973-9924993 +
  66. scaffold_12963:9925738-9925758 +
  67. scaffold_12963:9931733-9931753 +
  68. scaffold_12963:9959297-9959317 +
  69. scaffold_12963:10795415-10795435 +
  70. scaffold_12963:10796468-10796488 +
  71. scaffold_12963:10797234-10797254 +
  72. scaffold_12963:10798288-10798308 +
  73. scaffold_12963:10798803-10798823 +
  74. scaffold_12963:10800605-10800625 +
  75. scaffold_12963:10801120-10801140 +
  76. scaffold_12963:10801817-10801837 +
  77. scaffold_12963:10803792-10803812 +
  78. scaffold_13047:1752823-1752843 +
  79. scaffold_13047:3003032-3003052 +
  80. scaffold_13047:4320469-4320489 +
  81. scaffold_1074:232-252 +
  82. scaffold_7765:265-285 +
  83. scaffold_8137:228-248 +
  84. scaffold_9580:1295-1315 +
  85. scaffold_9580:2587-2607 +
  86. scaffold_9580:2766-2786 +
  87. scaffold_9580:3017-3037 +
  88. dvi_24475  scaffold_10702:676-696 +
  89. dvi_24475  scaffold_10702:855-875 +
  90. scaffold_12822:384616-384636 +
  91. scaffold_12822:1863283-1863303 +
  92. scaffold_12822:1865087-1865107 +
  93. scaffold_12963:16317408-16317428 +
  94. scaffold_12963:16321274-16321294 +
  95. scaffold_12970:8297266-8297286 +
  96. scaffold_13047:14709848-14709868 +
  97. scaffold_13047:14711909-14711929 +
  98. scaffold_13047:14712088-14712108 +
  99. scaffold_13047:14713693-14713713 +
  100. scaffold_13324:230290-230310 +
  101. dvi_23230  scaffold_758:117-137 +
  102. scaffold_758:337-357 +
  103. scaffold_1573:605-625 +
  104. scaffold_10553:1387-1407 +
  105. scaffold_12822:2270708-2270728 +
  106. scaffold_12822:2285823-2285843 +
  107. scaffold_13047:2809717-2809737 +
  108. scaffold_13047:4317082-4317102 +
  109. scaffold_13047:4318242-4318262 +
  110. scaffold_13047:14715850-14715870 +
  111. scaffold_13138:174-194 +
  112. scaffold_13138:420-440 +
  113. scaffold_13350:692-712 +
  114. scaffold_13350:1574-1594 +
  115. scaffold_13350:1820-1840 +
  116. scaffold_13350:2958-2978 +
  117. scaffold_13350:3204-3224 +
  118. scaffold_13350:3843-3863 +
  119. scaffold_13350:4089-4109 +
  120. scaffold_13350:16841-16861 +
  121. scaffold_587:1147-1167 +
  122. scaffold_773:817-837 +
  123. scaffold_773:961-981 +
  124. scaffold_12641:38-58 +
  125. scaffold_12709:1110-1130 +
  126. scaffold_12726:2074485-2074505 +
  127. scaffold_12726:2076425-2076445 +
  128. scaffold_12822:373199-373219 +
  129. scaffold_12822:374405-374425 +
  130. scaffold_12822:375224-375244 +
  131. scaffold_12822:378455-378475 +
  132. scaffold_12822:383589-383609 +
  133. scaffold_12875:8832777-8832797 +
  134. scaffold_12875:14054183-14054203 +
  135. scaffold_13047:2813157-2813177 +
  136. scaffold_13047:17871450-17871470 +
  137. scaffold_13324:222950-222970 +
  138. scaffold_13324:229070-229090 +
  139. scaffold_13350:937-957 +
  140. scaffold_13350:13418-13438 +
  141. scaffold_761:525-545 +
  142. scaffold_1027:624-644 +
  143. scaffold_1027:921-941 +
  144. dvi_24388  scaffold_9504:1633-1653 +
  145. scaffold_9587:1692-1712 +
  146. dvi_22766  scaffold_9587:3037-3057 +
  147. scaffold_9764:3539-3559 +
  148. dvi_23511  scaffold_12641:1038-1058 +
  149. scaffold_12875:10933833-10933853 +
  150. scaffold_12875:14053199-14053219 +
  151. scaffold_12963:9463539-9463559 +
  152. scaffold_12963:13159246-13159266 +
  153. scaffold_13047:1753402-1753422 +
  154. scaffold_13047:1753555-1753575 +
  155. scaffold_13047:15715525-15715545 +
  156. scaffold_13047:17906558-17906578 +
  157. scaffold_13047:17912780-17912800 +
  158. scaffold_13138:779-799 +
  159. scaffold_13350:3563-3583 +
  160. scaffold_13350:12202-12222 +
  161. scaffold_431:283-303 +
  162. scaffold_431:777-797 +
  163. scaffold_626:267-287 +
  164. scaffold_4792:302-322 +
  165. scaffold_4792:1007-1027 +
  166. scaffold_12822:4009330-4009350 +
  167. scaffold_805:976-996 -
  168. scaffold_7797:2245-2265 -
  169. scaffold_7797:2427-2447 -
  170. scaffold_7797:2575-2595 -
  171. scaffold_7797:3676-3696 -
  172. scaffold_9650:1725-1745 -
  173. scaffold_9650:1907-1927 -
  174. scaffold_9650:2055-2075 -
  175. scaffold_12928:7707106-7707126 -
  176. scaffold_12928:7708569-7708589 -
  177. scaffold_12928:7709563-7709583 -
  178. scaffold_12928:7710000-7710020 -
  179. scaffold_12932:1877-1897 -
  180. scaffold_12932:2317-2337 -
  181. scaffold_12932:2704-2724 -
  182. scaffold_12932:1681038-1681058 -
  183. scaffold_12932:1706401-1706421 -
  184. scaffold_12932:1707052-1707072 -
  185. scaffold_12932:1707803-1707823 -
  186. scaffold_12970:3703614-3703634 -
  187. scaffold_9587:3219-3239 +
  188. scaffold_12963:13159130-13159150 +
  189. scaffold_13047:1753809-1753829 +
  190. scaffold_12875:14741633-14741653 +
  191. scaffold_12970:8297157-8297177 +
  192. scaffold_13047:2810668-2810688 +
  193. scaffold_13047:2813630-2813650 +
  194. scaffold_13047:17871930-17871950 +
  195. scaffold_13047:17914649-17914669 +
  196. scaffold_756:1079-1099 +
  197. scaffold_1238:535-555 +
  198. scaffold_7485:548-568 +
  199. scaffold_10351:4480-4500 +
  200. scaffold_12709:1323-1343 +
  201. scaffold_12928:3146613-3146633 +
  202. scaffold_12928:7711622-7711642 +
  203. scaffold_12928:7714757-7714777 +
  204. scaffold_12932:1683804-1683824 +
  205. scaffold_12932:1685198-1685218 +
  206. scaffold_12932:1685947-1685967 +
  207. scaffold_12970:6349775-6349795 +
  208. scaffold_12970:6350424-6350444 +
  209. scaffold_12970:6355530-6355550 +
  210. scaffold_13047:194153-194173 +
  211. scaffold_13047:225406-225426 +
  212. scaffold_13047:2999500-2999520 +
  213. scaffold_13047:16056303-16056323 +
  214. scaffold_13047:17908636-17908656 +
  215. scaffold_13324:231245-231265 +
  216. scaffold_509:495-515 +
  217. scaffold_509:605-625 +
  218. scaffold_1009:133-153 +
  219. scaffold_1009:741-761 +
  220. scaffold_12875:7999104-7999124 +
  221. scaffold_12875:7999396-7999416 +
  222. scaffold_12875:7999867-7999887 +
  223. scaffold_12875:8000809-8000829 +
  224. scaffold_12875:8004577-8004597 +
  225. scaffold_12963:9458281-9458301 +
  226. scaffold_12963:9459556-9459576 +
  227. scaffold_12963:9460654-9460674 +
  228. scaffold_12963:9465621-9465641 +
  229. scaffold_12963:9466281-9466301 +
  230. scaffold_12963:9466391-9466411 +
  231. scaffold_12963:9466652-9466672 +
  232. scaffold_12963:9467573-9467593 +
  233. scaffold_12963:12956766-12956786 +
  234. scaffold_12970:4842519-4842539 +
  235. dvi_22972  scaffold_13094:884-904 +
  236. scaffold_9504:934-954 +
  237. scaffold_9587:996-1016 +
  238. scaffold_10603:86-106 +
  239. scaffold_10603:376-396 +
  240. scaffold_10603:558-578 +
  241. scaffold_12875:8000123-8000143 +
  242. scaffold_12928:2507124-2507144 +
  243. dvi_22576  scaffold_12928:2507503-2507523 +
  244. scaffold_12970:4848557-4848577 +
  245. scaffold_12970:4848667-4848687 +
  246. scaffold_9495:1573-1593 -
  247. scaffold_9495:2771-2791 -
  248. scaffold_9495:3384-3404 -
  249. scaffold_9495:3940-3960 -
  250. scaffold_12875:12985696-12985716 -
  251. scaffold_12875:12986343-12986363 -
  252. scaffold_12875:12986961-12986981 -
  253. scaffold_12875:12987472-12987492 -
  254. scaffold_12875:12989108-12989128 -
  255. scaffold_12875:12989717-12989737 -
  256. scaffold_12875:12990203-12990223 -
  257. scaffold_12875:12990609-12990629 -
  258. scaffold_12875:12991215-12991235 -
  259. scaffold_12875:12992548-12992568 -
  260. scaffold_12970:3018652-3018672 -
  261. scaffold_13042:5102015-5102035 -
  262. scaffold_13047:20865-20885 -
  263. scaffold_13047:21826-21846 -
  264. scaffold_13047:23133-23153 -
  265. scaffold_13049:16909078-16909098 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATGTCAGATTTTGGAATTTTATACCATTTTTGAATCGTAAGGATCAGTTCTGTCGATTGAAATCAAAAAAAAGGAAATCCAAAATTTTGACCCAAATCGACAAAATGGTAAGGGGTTGTTACATCACGTTTTTTTCAAAATCGAGGTCGGTGCGAAAATCGAAACTTTTTCGATGATTTTTTTTAATATCTCGGATAATAGCTCCGCGCGGCGATATCACGTTTCAAAACGACATAGCTCCGCGCAGAGAT
************************************************************************************....(((((..(((........)))...)))))....((((((.((..((....))..)).)).)))).**************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M047
female body
SRR060676
9xArg_ovaries_total
SRR060679
140x9_testes_total
SRR060686
Argx9_0-2h_embryos_total
SRR060672
9x160_females_carcasses_total
SRR060673
9_ovaries_total
SRR060678
9x140_testes_total
SRR060669
160x9_females_carcasses_total
SRR060655
9x160_testes_total
SRR060681
Argx9_testes_total
SRR060682
9x140_0-2h_embryos_total
SRR060684
140x9_0-2h_embryos_total
SRR060677
Argx9_ovaries_total
SRR060657
140_testes_total
SRR060660
Argentina_ovaries_total
SRR060665
9_females_carcasses_total
SRR060680
 9xArg_testes_total
SRR060689
160x9_testes_total
....................................................................................TTTTGACCCAAATCGACAAAATGGT.............................................................................................................................................. 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TTTCAAAATCGAGGTCGGTGC.................................................................................................. 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTAAAACGACATAGCTCCGCGCA..... 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GTTGTTACATCACGGATT....................................................................................................................... 18 2 15 0.13 2 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0
.............................TTGCATCGTAAGGATCAGTTC......................................................................................................................................................................................................... 21 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.TGTCAGATTTTGGAATTTTATACCAT................................................................................................................................................................................................................................ 26 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.TGTCAGATTTTGGAATTTTATACCATTT.............................................................................................................................................................................................................................. 28 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TAATAGCTCCGCGCGGCGATA................................... 21 0 11 0.09 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................TAAGGATCGGTTCTGTCGATT................................................................................................................................................................................................. 21 1 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................TCGTAAGGATCAGTTCTGTCGATT................................................................................................................................................................................................. 24 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................GTAAGGATCAGTTCTGTCGATT................................................................................................................................................................................................. 22 0 13 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAAGGATGAGTTCTGTCGATT................................................................................................................................................................................................. 21 1 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................AGGATCAGTTCTATCGATTGAAATCCA......................................................................................................................................................................................... 27 2 19 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.TGTCAGATCTTGGAATTTTTTACCATT............................................................................................................................................................................................................................... 27 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................CGTGGGGATCAGTTCTGTCGA................................................................................................................................................................................................... 21 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTACATCACGTTTTTGTCAAAATCG............................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................TTTCAAAACGACATAGCTCCG......... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................TCGAGGTCGGTGCGAAAATCGA......................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.TGTCAGATTTTGGAATTTTATACCATT............................................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TCTCGGATAATAGCTCCGCGC.......................................... 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................TAAGGAGCAGTTCTGTCGATT................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................................................TTTTTTAATATCTCGGATAATAGCTC............................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TACAGTCTAAAACCTTAAAATATGGTAAAAACTTAGCATTCCTAGTCAAGACAGCTAACTTTAGTTTTTTTTCCTTTAGGTTTTAAAACTGGGTTTAGCTGTTTTACCATTCCCCAACAATGTAGTGCAAAAAAAGTTTTAGCTCCAGCCACGCTTTTAGCTTTGAAAAAGCTACTAAAAAAAATTATAGAGCCTATTATCGAGGCGCGCCGCTATAGTGCAAAGTTTTGCTGTATCGAGGCGCGTCTCTA
**************************************************************************************************....(((((..(((........)))...)))))....((((((.((..((....))..)).)).)))).************************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR060656
9x160_ovaries_total
SRR060688
160_ovaries_total
SRR060658
140_ovaries_total
SRR060662
9x160_0-2h_embryos_total
SRR060673
9_ovaries_total
SRR060682
9x140_0-2h_embryos_total
SRR060687
9_0-2h_embryos_total
SRR060676
9xArg_ovaries_total
SRR060675
140x9_ovaries_total
SRR060685
9xArg_0-2h_embryos_total
SRR060677
Argx9_ovaries_total
SRR060663
160_0-2h_embryos_total
SRR060661
160x9_0-2h_embryos_total
SRR060674
9x140_ovaries_total
SRR060684
140x9_0-2h_embryos_total
V047
embryo
SRR060655
9x160_testes_total
M047
female body
SRR060654
160x9_ovaries_total
SRR060678
9x140_testes_total
SRR060686
Argx9_0-2h_embryos_total
SRR060660
Argentina_ovaries_total
SRR060671
9x160_males_carcasses_total
SRR060679
140x9_testes_total
SRR060681
Argx9_testes_total
SRR060683
160_testes_total
SRR060680
 9xArg_testes_total
SRR060657
140_testes_total
SRR060666
160_males_carcasses_total
SRR060668
160x9_males_carcasses_total
M028
head
M061
embryo
SRR060664
9_males_carcasses_total
SRR060667
160_females_carcasses_total
SRR060669
160x9_females_carcasses_total
SRR060672
9x160_females_carcasses_total
SRR060689
160x9_testes_total
V116
male body
.....................................................................................................................................................................................................................................GCTGTATCGAGGCGCGTCTCTA 22 0 20 9.60 192 25 39 23 5 5 11 8 2 6 5 2 10 7 5 3 5 4 2 5 2 2 4 2 1 1 2 0 1 0 1 0 0 1 1 0 1 0 1
.....................................................................................................................................................................................................................................GCTGTATCGATGCGCGTCTCTA 22 1 20 4.40 88 22 0 0 20 10 3 6 6 0 7 5 0 0 2 0 0 3 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGAGGCGCGTCTCT. 21 0 20 1.00 20 2 0 5 0 0 1 0 0 1 0 2 0 1 2 2 0 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................................CTGTATCGATGCGCGTCTCTA 21 1 20 0.15 3 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........AAAACCTTAAAATATGGTAAAAAC........................................................................................................................................................................................................................... 24 0 20 0.10 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................AGGTTTTAAAACTGGGTTTAGCTGT..................................................................................................................................................... 25 0 20 0.10 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CTGTATCGAGGCGCGTCTCT. 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGAGACGCGTCTCTA 22 1 20 0.10 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGTATCGAGGCGCGTCTCTA 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TGCTGTATCGAGGCGCGTCTCTA 23 0 20 0.10 2 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCTCCAGCCACGCTTTTAGC.......................................................................................... 20 0 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................CCCCAACAATGTAGTGCAAAAA...................................................................................................................... 22 0 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGTTTTGCTGTATCGAGGTGCGT..... 23 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................CCCCCAACAATGTAGTGC........................................................................................................................... 18 1 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................ACCGTAGTGCAAAAAAAGTTTTAGCT........................................................................................................... 26 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AGTTTTAGCTCCAGCCACGCT................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TTTAGCTCCAGCCACGCTTTTAGCTTT....................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................ACTGGGTTTAGCTGTTTTACC............................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGCTGTATCGAGGCGCGTCTCTA 23 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTACGAAAAAAAATTATAGAGCCT........................................................ 24 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CTGTATCGAGGCGCGTCTCTA 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGCGGCGCGTCTCTA 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTCTATCGAGGCGCGTCTCTA 22 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................AGTTTTAGCTCCAGCCACGCTTTTAGC.......................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGATGCGCGTCT... 19 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TTTTTTTTCCTTTAGGTTTTAAAACTG................................................................................................................................................................ 27 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................AAAAAAAGTTTTAGCTCCAGCCA.................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TTTGAAAAAGCTACTAAAAAAA.................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CCTGTATCGAGGCGCGTCTCT. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................AGCTCCAGCCACGCTTTTAGC.......................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TGTCTAAAACCTTAAAATATGGTAA............................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGAGGCGCGTCCCTA 22 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................GTAGTGCAAAAAAAGTTTTAGCT........................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCAAAGTTTTGCTGTATCGAG........... 22 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGATGCGCGTCTCT. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................ACGTCGCATTCCTAGTTAAG......................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................CTAGCTGTAGTTTTTTTTCCTTT.............................................................................................................................................................................. 23 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGAGGCTCGTCTCTA 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................CGAACAATGTAGTCGAAAAA...................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................TGCTGTATCGAGGCGCGTCTCT. 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGAGGCGCGTCTCGA 22 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................AGGTTTTAAAACTGGGTTTA.......................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................AGTGCAAAAAAAGTTTTAGCTCCAGCC..................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGAGGCGCGTCT... 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTTAAAACTGGGTTTAGCTGTTTTA................................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................TAGGTTTTAAAACTGGGTTTAGCTGTT.................................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CCTATTATCGAGGCCCGCC........................................ 19 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGTATCGAGCCGCGTCTCT. 21 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................GCTACTAAAAAAAATTATAGAGC.......................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTTTATCGACGCGCGTCTCTA 22 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TAAAACTGGGTTTAGCTGTTT................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:12329615-12329865 - dvi_11453 ATGTC-AGATTTTGGAATTTTATACCATTTTTGAATCGTAAGGATCAGTTCTGTCGATTGAAATCAAAAAAAAGGAAATCCAAAA-------TTTTGACCCAAATCGACAAAATGGTAAGGGGTTGTTAC-A------------TCACGTTTTTTTCAAAATCGAGGTCGGTGCGAAAATCGAAA------CTTTTTCGATGAT--------------------------------------------------------------------------------TTTTT--TTAATATC------TCGGATAATAGCTCC--GCGCGGCGATATCACGTTT-------CAAAACGACATAGCTCCGCGCAGAGAT
droWil2 scf2_1100000004961:4337929-4338039 + TTGTT-AGATTTTTGT-------------------------------------------------TAAA---------AACAAAAAACAAAATT---------------GTTAGA--------TTTTTTCTGAAACG-------ACATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT--GCTCGGAGATATGTCGTTC-------TGAAACGACATAATTTCGCGCGGAGAT
dp5 Unknown_group_82:12255-12340 + TTTTT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------CTAAGCGTCATAGCTCCGCGCGGAGAT
droPer2 scaffold_166:92008-92093 + TTTTT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------CTAAGCGTCATAGCTCCGCGCGGAGAT
droKik1 scf7180000302245:10230-10403 - CAAAATTAATAT--------TCAACCCCAATGAAT--------------------------------------------------------------------------ATAATA--------TATTCCCTAAAACGTTGTCTTTTTA------------------------------AGTTTTTTTTTATTAATATTAGAAATAT---------------AAGGT----TTTTACATTAC-A----TTAA---------------------------------------------GTATATATGTCG-TTTGTAGCTC----GGCGGAGATATGTCGCCT-------TAAAGCGACATAACTCCGCGCGGAGAT
droFic1 scf7180000453342:52918-53009 + ATATA-ATATTATGGAATGTTATACTTTTTTGAGCTCGTAATAATATTTCCCATCGACTGGTATTCAAA---------TCTAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAGGTACATTAAC
droEle1 scf7180000487721:5898-5983 + TGTGG---AAATCGGAGTTTCACTTTTTTT-------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------AGATCTCC--GCGCGACATATCTCCGCCT---TTTTACAAACGACATATCTCCGCGCGAAGAT
droRho1 scf7180000777200:274860-275059 - ATGGGCACATGTTGGAATGGCATACCTTGTTGAATTCGTTATAAAATTTCCAATCGAGTGGCATTCACA---------GCTCAAAATCTTCAT---------------------------------------------------------------------------------TTTGTTCGGTTTTTCGCCAAAATAGACGATGT---------------AACCC----CTTCTCAAAAATGCTGAAATCCGGAGATCCGGAAAAATCAACTTTTTTATCGGTTTTTTGATCAAA-------------------AACCTGG-----GAAATA------------------------------------------
droBia1 scf7180000301585:67116-67290 - AAAAT-TTCGATTGAAAAATCAAAGTTCTTCAAATTGGAAACAAACTTT------------------------------------------------------------------------------CTCGGTTACGTTGTTTCTCACAATGTGATCAAAAC------------TGATCCCGAAA------AAATTTCCACAATCG-----------------------------------------TAAA---------------------------------------------GTA------TCCAATAAAATATTC--GA---GAGCTATGTCGTTT------TCAAAACGTCATATCTCCGTGCGGAGTT
droTak1 scf7180000411271:7027-7157 - ATCAC-GGATTTCT--------------------------------------------------------------------------------------------------------------------CAAAACTGCGACGT---------------------------------------------------------GATGGAAAGTTTCCAAGTATGGGGTAGTTTTCTACG-----------------------------------------------------------GCA------TAGCGTCATATCTCC--GCGCG---ACATATCTCCGCCCATCTGCGAACGACATATCTCCGCGCTGAGAT
droYak3 2R:1313809-1313855 - C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGGAATAATGTCGTTT-------CAAAGAGACATAGCTCCGCGCCGGAGT
droEre2 scaffold_4644:2263666-2263850 - ATTGTCCAAGACTAGAATGTCATACCTCGTTGAATTCGTAATGAAATTCCCTATCGATCTGTATTTAAA---------CAAAAAAAATAAAAT---------------------------------------------------------------------------------TTTTTGCCATTTTTCGCAAATTTTGATGATGG-----------------------------------------AAAATGGAAAAATGGAAATTTTTTATTTTGTGTTTTTTTTTGGTACGAA-------------------ATTATCA-----GTATT-----------------------------------TTGTCGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATGTC-AGATTTTGGAATTTTATACCATTTTTGAATCGTAAGGATCAGTTCTGTCGATTGAAATCAAAAAAAAGGAAATCCAAAA-------TTTTGACCCAAATCGACAAAATGGTAAGGGGTTGTTAC-A------------TCACGTTTTTTTCAAAATCGAGGTCGGTGCGAAAATCGAAA------CTTTTTCGATGAT--------------------------------------------------------------------------------TTTTT--TTAATATC------TCGGATAATAGCTCC--GCGCGGCGATATCACGTTT-------CAAAACGACATAGCTCCGCGCAGAGATSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
............................................................................................TTTTGACCCAAATCGACAAAATGGT..................................................................................................................................................................................................................................................................2550.201000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................TTTCAAAATCGAGGTCGGTGC.........................................................................................................................................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
.TGTC-AGATTTTGGAATTTTATACCAT...........................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000002000000000000000000000000000000000
.TGTC-AGATTTTGGAATTTTATACCATTT.........................................................................................................................................................................................................................................................................................................................................................28200.102000000000000000000000000000002000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TAATAGCTCC--GCGCGGCGATA..........................................21110.091000000000000000000010000000000000000000000000000000000000000000
...................................TCGTAAGGATCAGTTCTGTCGATT............................................................................................................................................................................................................................................................................................................................24130.081000000000000000000000000000000000000100000000000000000000000000
.....................................GTAAGGATCAGTTCTGTCGATT............................................................................................................................................................................................................................................................................................................................22130.081000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TTT-------CAAAACGACATAGCTCCG.........21200.051000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................TCGAGGTCGGTGCGAAAATCGA................................................................................................................................................................................................22200.051000000010000000000000000000000000000000000000000000000000000000
.TGTC-AGATTTTGGAATTTTATACCATT..........................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TC------TCGGATAATAGCTCC--GCGC.................................................21200.051000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TTTT--TTAATATC------TCGGATAATAGCTC........................................................26200.051000000000000000000000000000010000000000000000000000000000000000
droWil2
TTGTT-AGATTTTTGT-------------------------------------------------TAAA---------AACAAAAAACAAAATT---------------GTTAGA--------TTTTTTCTGAAACG-------ACATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTT--GCTCGGAGATATGTCGTTC-------TGAAACGACATAATTTCGCGCGGAGATSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...............................................................................................................................................................................................................................................................................................................................T--GCTCGGAGATATGTCGTTC-------T..........................2111.00100010
..............................................................................................................................................................................................................................................................................................................................................................AAACGACATAATTTCGCGCGG....21200.05100010
.............................................................................................................................................................................................................................................................................................................................................................GAAACGACATAATTTCGCGCGGAGA.25200.05101000
.........................................................................................................................................................................................................................................................................................................................................GATATGTCGTTC-------TGAAACGACAT................23200.05100001
............................................................................................................................................................................................................................................................................................................................................................TGAAACGACATAATTTCGCG.......20200.05101000
............................................................................................................................................................................................................................................................................................................................................................TGAAACGACATAATTTCGCGCG.....22200.05100100
dp5
TTTTT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------CTAAGCGTCATAGCTCCGCGCGGAGATSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTG.............................................................................................................................................................................................................................23737.71264026400000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGC............................................................................................................................................................................................................................2476.714704520000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTC..........................................................................................................................................................................................................................2676.574604120300000
.............................................................................................................................................................................................................................................................................................................................................................TAAGCGTCATAGCTCCGCGCGGAGA.2556.403202910200000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCA.........................................................................................................................................................................................................................2774.293002800200000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------C..........................2554.002002000000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTG.............................................................................................................................................................................................................................2473.712602600000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGC....................................2253.601801700001000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATT...............................................................................................................................................................................................................................2173.572502500000000
...TT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATT...............................................................................................................................................................................................................................2373.002101920000000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTG.............................................................................................................................................................................................................................2282.752202200000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------...........................2452.601301210000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCG.....................................2152.601301300000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAA........................................................................................................................................................................................................................2872.571801700100000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGC.....................2642.50100910000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCT...................................2352.001001000000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATA..........................................2571.861301300000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGCGTC..................2941.7570340000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATT...............................................................................................................................................................................................................................2271.711201200000000
.............................................................................................................................................................................................................................................................................................................................................................TAAGCGTCATAGCTCCGCGCGGAG..2451.6080610100000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------CT.........................2641.2550410000000
...................................................................................................................................................................................................................................................................................................................................................TT-------CTAAGCGTCATAGCTCCGCGCGG....2541.2550500000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTC......................................2061.1770400102000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTT..............................................................................................................................................................................................................................2271.1480800000000
...................................................................................................................................................TAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGG...............................................2581.1390800001000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTA-------...........................2451.0050500000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGC............................................................................................................................................................................................................................2571.0070520000000
...................................................................................................................................................................................................................................................................................................................................................TT-------CTAAGCGTCATAGCTCCGCGCGGA...2641.0040400000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGA............................................................................................................................................................................................................................2471.0070610000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGCG....................2741.0040300100000
..TTT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATT...............................................................................................................................................................................................................................2470.8660600000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGT....................................2250.8040400000000
.............................................................................................................................................................................................................................................................................................................................................................TAAGCGTCATAGCTCCGCGCGGAGAT2650.8040310000000
....................................................................................................................................................................................................................................................................................................................................................T-------CTAAGCGTCATAGCTCCGCGCGGA...2550.8040400000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAG......................2540.7530300000000
....................................................................................................................................................................................................................................................................................................................................GCGGAGATATGTCGCTT-------CTAAGCGTC..................2640.7530210000000
...................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGCTT-------CTAAGCGTC..................2740.7530300000000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTC..........................................................................................................................................................................................................................2580.7560600000000
......................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGCTT-------CTAAGCGTCA.................2540.7530300000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTC..........................................................................................................................................................................................................................2770.7150500000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGA....................................2250.6030300000000
....................................................................................................................................................................................................................................................................................................................................................T-------CTAAGCGTCATAGCTCCGCGCGGAGA.2750.6030300000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAAT................................................................................................................................................................................................................................2070.5740400000000
...................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGCTT-------CTAAGC.....................2440.5020200000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGAA....................2760.5030300000000
...........................................................................................................................................................TCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTC......................................2660.5030300000000
..................................................................................................................................................................................................................................................................................................................................GCGCGGAGATATGTCGCTT-------CTAAGA.....................2540.5020200000000
...........................................................................................................................................................TCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGT.......................................2560.5030210000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATG........................................2760.5030200001000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAAT................................................................................................................................................................................................................................2170.4330300000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTA..........................................................................................................................................................................................................................2670.4330300000000
...................................................................................................................................................TAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAG.............................................2770.4330300000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCT...........................................................................................................................................................................................................................2570.4330300000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCAA..........................................................................................................................................................................................................................2670.4330300000000
....................................................................................................................................................................................................................................................................................................................................................T-------CTAAGCGTCATAGCTCCGCGCGG....2450.4020200000000
................................................................................................................................................................AT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGC....................................2350.4020200000000
...............................................................................................................................................................................................................................................................................................................................................TCGCTT-------CTAAGCGTCATAGCTCCGCGC......2750.4020200000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------T..........................2550.4020200000000
...........................................................................................................................................................TCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGC....................................2850.4020200000000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGC............................................................................................................................................................................................................................2380.3830300000000
...........................................................................................................................................................TCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATG........................................2460.3320200000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGA............................................2370.2920200000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAG.............................................2270.2920200000000
...TT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTG.............................................................................................................................................................................................................................2570.2920200000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCT.........................................................................................................................................................................................................................2770.2920200000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAA.......................................................................................................................................................................................................................2970.2920200000000
.......................................................................................................................................................TTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAG.............................................2370.2920100001000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATA..................................................................................................................................................................................................................................1870.2920200000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCA...........................................................................................................................................................................................................................2570.2920200000000
..TTT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAAT................................................................................................................................................................................................................................2370.2920200000000
...................................................................................................................................................TAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGA............................................2870.2920200000000
.......................................................................................................................................................TTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGG...............................................2180.2520200000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGCGT...................2840.2510010000000
.........TGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................2880.2520200000000
..................................................................................................................................................................................................................................................................................................................................GCGCGGAGATATGTCGCTT-------CTAAGC.....................2540.2510100000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGCGA...................2840.2510100000000
...................................................................................................................................................TAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCG................................................2480.2520200000000
...................................................................................................................................................................................................................................................................................................................................................TT-------CTAAGCGTCATAGCTCCGCGCGGAGA.2840.2510100000000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAA........................................................................................................................................................................................................................2780.2520200000000
.....................................................................................................................................................................................................................................................................................................................................CGGAGATATGTCGCTT-------CTAAGCGTC..................2540.2510100000000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGAAA..........................................................................................................................................................................................................................2580.2520200000000
........ATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTG.............................................................................................................................................................................................................................2180.2520200000000
...................................................................................................................................................................................................................................................................................................................................CGCGGAGATATGTCGCTT-------CT.........................2040.2510100000000
......................................................................................................................................................................................................................................................................................................................................GGAGATATGTCGCTT-------CTAAGC.....................2140.2510100000000
...................................................................................................................................................TAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGA..............................................2680.2520200000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGG...............................................2080.2520200000000
............................................................................................................................................................................................................................................................................................................................................................CTAAGCGTCATAGCTCCGCGCGGAGA.2650.2010100000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCA...................................2350.2010100000000
..............................................................................................................................................................................................................................................................................................................................................................AAGCGTCATAGCTCCGCGCGGAGAT2550.2010100000000
....................................................................................................................................................................................................................................................................................................................................................T-------CTAAGCGTCATAGCTCCGCGCGGAGAA2850.2010100000000
...................................................................................................................................................................................................................................................................................................................................................TT-------CTAAGCGTCATAGCTCCGC........2150.2010100000000
...................................................................................................................................................................................................................................................................................................................................................TT-------CTAAGCGTCATAGCTCCGCGC......2350.2010100000000
..............................................................................................................................................................................................................................................................................................................................................................AAGCGTCATAGCTCCGCGCGGAGA.2450.2010100000000
................................................................................................................................................................AT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------C..........................2650.2010100000000
..............................................................................................................................................................AAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGT....................................2550.2010100000000
.............................................................................................................................................................................................................................................................................................................................................................TAAGCGTCATAGCTCCGCGCGGAGT.2550.2010010000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGTA...................................2350.2010100000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CC.........................2250.2010010000000
.............................................................................................................................................................................................................................................................................................................................GCT--GCGCGGAGATATGTCGCT...................................2150.2010000001000
....................................................................................................................................................................................................................................................................................................................................................T-------CTAAGCGTCATAGCTCCGCGCGGAG..2650.2010100000000
.............................................................................................................................................................................................................................................................................................................................................................TAAGCGTCATAGCTCCGCGCGGAGAA2650.2010100000000
.................................................................................................................................................................................................................................................................................................................................................GCTT-------CTAAGCGTCATAGCTCCGCGC......2550.2010010000000
............................................................................................................................................................................................................................................................................................................................CGCT--GCGCGGAGATATGTCGCT...................................2250.2010100000000
...................................................................................................................................................................................................................................................................................................................................................TT-------CTAAGCGTCATAGCTCCGCGCA.....2450.2010100000000
....................................................................................................................................................................................................................................................................................................................................................T-------CTAAGCGTCATAGCTCCGCGCGGAGAT2850.2010100000000
.............................................................................................................................................................................................................................................................................................................................................................TAAGCGTCATAGCTCCGCGCGGA...2350.2010100000000
..............................................................................................................................................................................................................................................................................................................................................................AAGCGTCATAGCTCCGCGCGG....2150.2010100000000
............................................................................................................................................................................................................................................................................................................................CGCT--GCGCGGAGATATGTCGCTA-------...........................2350.2010100000000
............................................................................................................................................................................................................................................................................................................................CGCT--GCGCGGAGATATGTCGC....................................2150.2010100000000
.............................................................................................................................................................................................................................................................................................................................GCT--GCGCGGAGATATGTCGCTT-------C..........................2350.2010100000000
....................................................................................................................................................................................................................................................................................................................................................T-------CTAAGCGTCATAGCTCCGCG.......2160.1710100000000
............................................................................................................................................................................................................................................................................................................................CGCT--GCGCGGAGATATGTC......................................1960.1710100000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGAAA...................2860.1710100000000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGCTT-------CTAAGCA....................2760.1710100000000
.............................................................................................................................................................AAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTC......................................2460.1710100000000
.............................................................................................................................................................................................................................................................................................................................................................TAAGCGTCATAGCTCCGCGC......2060.1710100000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGT............................................................................................................................................................................................................................2470.1410100000000
............................................................................................................................................................CAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGA............................................1970.1410100000000
...........................................................................................................................................................TCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGAT...........................................2170.1410100000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAA.................................................................................................................................................................................................................................1970.1410100000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGT.......................................1970.1410100000000
.........................................................................................................................................................GCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGAT...........................................2370.1410100000000
............................................................................................................................................................CAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGAT...........................................2070.1410100000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATA...............................................................................................................................................................................................................................2170.1410100000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCA.........................................................................................................................................................................................................................2870.1410100000000
..................................................................................................................................................................................................................................................................................................................................................................GTCATAGCTCCGCGCGGAGA.2070.1410100000000
.........................................................................................................................................................GCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGA............................................2270.1410100000000
......................................................................................................................................................TTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAG.............................................2470.1410100000000
...TT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATA...............................................................................................................................................................................................................................2370.1410100000000
......................................................................................................................................................TTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATA..........................................2770.1410100000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGAAA..........................................................................................................................................................................................................................2670.1410100000000
.................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATG........................................1870.1410100000000
...TT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGC............................................................................................................................................................................................................................2670.1410100000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCT...........................................................................................................................................................................................................................2670.1410010000000
...........................................................................................................................................................TCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGAA...........................................2170.1410100000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGG............................................................................................................................................................................................................................2470.1410100000000
.TTTT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAAT................................................................................................................................................................................................................................2470.1410100000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGAT...........................................2470.1410100000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTT..............................................................................................................................................................................................................................2370.1410100000000
...........................................................................................................................................................TCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATA..........................................2270.1410100000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAA.................................................................................................................................................................................................................................2070.1410100000000
...................................................................................................................................................TAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGT..............................................2680.1310100000000
........ATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGT............................................................................................................................................................................................................................2280.1310100000000
..................................................................................................................................................ATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGC.................................................2480.1310010000000
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAAAAA..............................................................................................................................................................................................................................2280.1310100000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGA..............................................2180.1310100000000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGA............................................................................................................................................................................................................................2380.1310100000000
............TGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------C..........................................................2680.1310100000000
....................................................................................................................................................AATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGG...............................................2480.1310100000000
......................................................................................................................................................TTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCG................................................2180.1310100000000
...........GTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................2680.1310100000000
...................................................................................................................................................TAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGC.................................................2380.1310100000000
............TGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CG.........................................................2780.1310100000000
......................................................................................................................................................TTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGTT.............................................2480.1310100000000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTT..............................................................................................................................................................................................................................2180.1310100000000
................TCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--G....................................................2680.1310100000000
........ATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................2980.1310001000000
.................CG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GC...................................................2680.1310010000000
.................................................................................................................................................CATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGC.................................................2580.1310100000000
.........TGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCA.........................................................................................................................................................................................................................2490.1110000100000
..........GGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCT...........................................................................................................................................................................................................................2190.1110000001000
...............................................................................................................................................................................................................................................................................................................................T--GCGCGGAGATATGTCGAA...................................1990.1110100000000
...........GTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTC..........................................................................................................................................................................................................................2190.1110100000000
..........GGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTG.............................................................................................................................................................................................................................19100.1010100000000
........................................................................................................................................................TGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGTT................................................19110.0910100000000
........ATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGAAA..........................................................................................................................................................................................................................24120.0810100000000
....T-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCTA...................................................................................................................................................................................................................................18130.0810100000000
droPer2
TTTTT-TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------CGCT--GCGCGGAGATATGTCGCTT-------CTAAGCGTCATAGCTCCGCGCGGAGATSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
......TGATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTC..........................................................................................................................................................................................................................2620.501001000
.......GATGGTGTATCG-----------------------------------------------------------------------------------------------------------------------------GCATAATTTGCTCAA........................................................................................................................................................................................................................2730.331010000
droKik1
CAAAATTAATAT--------TCAACCCCAATGAAT--------------------------------------------------------------------------ATAATA--------TATTCCCTAAAACGTTGTCTTTTTA------------------------------AGTTTTTTTTTATTAATATTAGAAATAT---------------AAGGT----TTTTACATTAC-A----TTAA---------------------------------------------GTATATATGTCG-TTTGTAGCTC----GGCGGAGATATGTCGCCT-------TAAAGCGACATAACTCCGCGCGGAGATSizeHit CountTotal NormTotal
No Reads
droFic1
ATATA-ATATTATGGAATGTTATACTTTTTTGAGCTCGTAATAATATTTCCCATCGACTGGTATTCAAA---------TCTAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAAGGTACATTAACSizeHit CountTotal NormTotal
No Reads
droEle1
TGTGG---AAATCGGAGTTTCACTTTTTTT-------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------AGATCTCC--GCGCGACATATCTCCGCCT---TTTTACAAACGACATATCTCCGCGCGAAGATSizeHit CountTotal NormTotal
No Reads
droRho1
ATGGGCACATGTTGGAATGGCATACCTTGTTGAATTCGTTATAAAATTTCCAATCGAGTGGCATTCACA---------GCTCAAAATCTTCAT---------------------------------------------------------------------------------TTTGTTCGGTTTTTCGCCAAAATAGACGATGT---------------AACCC----CTTCTCAAAAATGCTGAAATCCGGAGATCCGGAAAAATCAACTTTTTTATCGGTTTTTTGATCAAA-------------------AACCTGG-----GAAATA------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAAAT-TTCGATTGAAAAATCAAAGTTCTTCAAATTGGAAACAAACTTT------------------------------------------------------------------------------CTCGGTTACGTTGTTTCTCACAATGTGATCAAAAC------------TGATCCCGAAA------AAATTTCCACAATCG-----------------------------------------TAAA---------------------------------------------GTA------TCCAATAAAATATTC--GA---GAGCTATGTCGTTT------TCAAAACGTCATATCTCCGTGCGGAGTTSizeHit CountTotal NormTotal
No Reads
droTak1
ATCAC-GGATTTCT--------------------------------------------------------------------------------------------------------------------CAAAACTGCGACGT---------------------------------------------------------GATGGAAAGTTTCCAAGTATGGGGTAGTTTTCTACG-----------------------------------------------------------GCA------TAGCGTCATATCTCC--GCGCG---ACATATCTCCGCCCATCTGCGAACGACATATCTCCGCGCTGAGATSizeHit CountTotal NormTotal
No Reads
droYak3
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACGGAATAATGTCGTTT-------CAAAGAGACATAGCTCCGCGCCGGAGTSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
No Reads
droEre2
ATTGTCCAAGACTAGAATGTCATACCTCGTTGAATTCGTAATGAAATTCCCTATCGATCTGTATTTAAA---------CAAAAAAAATAAAAT---------------------------------------------------------------------------------TTTTTGCCATTTTTCGCAAATTTTGATGATGG-----------------------------------------AAAATGGAAAAATGGAAATTTTTTATTTTGTGTTTTTTTTTGGTACGAA-------------------ATTATCA-----GTATT-----------------------------------TTGTCGATSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
...................................................TATCGATCTGTATTTAAA---------CAAAAAAAA................................................................................................................................................................................................................................................................................................27140.0710000100

Generated: 05/17/2015 at 04:37 AM