ID:

dvi_11277

Coordinate:

scaffold_12963:10764548-10764698 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.5 -24.5 -24.3

Flybase annnotation

exon [dvir_GLEANR_1940:7]; CDS [Dvir\GJ17344-cds]; intron [Dvir\GJ17344-in]

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTGTCTATCCCATACACAATCTGAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGTCCAGAAGAGAGCAGTCGAATCGCCGCCACTTTGCTAACTTTTTGCTAGTTATCCCCATTTGATATATATATATATATATATATATAGATATACATATGTTTTCTTTTAAAGTATTATTGTAAAGCAAGTATACTACATACAGCACACACCCAAGAAAACGGAATGTAAAGCTTATCAAAATTGCACCTCAAATCA
**************************************************........(((((((((((.((((((.......(((..((.........)).))).......))))))((((((((((....))))))))))..........)))))))))))..(((((..((((...))))..)))))...........**************************************************
Read size # Mismatch Hit Count Total Norm Total V047
embryo
M061
embryo
M047
female body
SRR060667
160_females_carcasses_total
V053
head
M027
male body
SRR060689
160x9_testes_total
SRR060684
140x9_0-2h_embryos_total
V116
male body
SRR060658
140_ovaries_total
SRR060685
9xArg_0-2h_embryos_total
SRR060668
160x9_males_carcasses_total
SRR060675
140x9_ovaries_total
SRR060666
160_males_carcasses_total
..........................................................................................................................................................................................................CACCCAAGAAAACGGAATGTAAAGC........................ 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................GATGTAAGTCCAGAAGAGAGC....................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ACTACATACAGCACACACCCAAG......................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TTTTGCTAGTTATCCCCATTTGAT.................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................AATCACCGCCACTTTGCTGATTT........................................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................TCAGAAGAGAGAAGTCGAACC.............................................................................................................................................................................. 21 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AAACTCATCAAAATGGCACCTC...... 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................TGAAGTCGGTAAGATCGAAGA.......................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................GTCTGTAAGAAGGCTGATGT....................................................................................................................................................................................................... 20 3 6 0.33 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0
....................................................AAGTCCAGAAGAGAACCCTC................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................AGTCAAGGCTGTAAGAAGAAA............................................................................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................CAGAAGAGGACAGTCGAA................................................................................................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................AAACTCATCAAAATGGCACCT....... 21 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................AAGTGTTATTGTAAAGGAA.................................................................... 19 2 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................TGAAGTCGGTAAGATCGAA............................................................................................................................................................................................................ 19 3 20 0.15 3 0 0 0 1 0 0 0 0 1 0 0 0 0 1
.................................................................................................................................................................................................................................ACTCATCAAAATGGCACCTC...... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................TTTGCTGGTTATCCCCTT......................................................................................................................................... 18 2 14 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................GCTATATTTTTGCTAGTGAT............................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CACAGATAGGGTATGTGTTAGACTTTTCAGTTCAGACATTCTTGCTTCTACATTCAGGTCTTCTCTCGTCAGCTTAGCGGCGGTGAAACGATTGAAAAACGATCAATAGGGGTAAACTATATATATATATATATATATATATCTATATGTATACAAAAGAAAATTTCATAATAACATTTCGTTCATATGATGTATGTCGTGTGTGGGTTCTTTTGCCTTACATTTCGAATAGTTTTAACGTGGAGTTTAGT
**************************************************........(((((((((((.((((((.......(((..((.........)).))).......))))))((((((((((....))))))))))..........)))))))))))..(((((..((((...))))..)))))...........**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR060683
160_testes_total
M047
female body
GSM1528803
follicle cells
SRR060656
9x160_ovaries_total
SRR060668
160x9_males_carcasses_total
........GGGTATGTGTTAGACTTTTCA.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
....................................................................TAAGCTTAGTGGCGGCGAAAC.................................................................................................................................................................. 21 3 5 0.20 1 0 1 0 0 0
........................................CTAGCTTCTACATTC.................................................................................................................................................................................................... 15 1 8 0.13 1 0 0 1 0 0
.........................................................................................................ACAGGGGTAAGCTAAATATAT............................................................................................................................. 21 3 12 0.08 1 0 0 0 1 0
...........................................................................AGCAGCGGTGACACAATTG............................................................................................................................................................. 19 3 13 0.08 1 0 1 0 0 0
.........................................................................................................................................................................................................................TGACCTTTCGAATAGTTTTAG............. 21 3 15 0.07 1 0 0 0 0 1
.......................................ACTAGCTTCTCCATTCAGG................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:10764498-10764748 + dvi_11277 GTGTCTATCCCATACACAATCTGAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGTCCAGAAGAGAGCAGTCGAATCGCCGCCACTTTGCTAACTTTTTGCT-----------------------------AGTTATCCCCATTTGATATATATATAT----ATATATATATATAGATATACA--TATGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTAAA----------------GTATTATTGTA-AAGCA---AGTAT-ACTAC---ATACAGCA-CACACCCAAGAAAAC-GGAATGT-AAAGCTTA--TCAAAATTGCACCTCAAA------TCA
droMoj3 scaffold_6500:19482364-19482596 + GTGTCTATCCCATACACAATCTGAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGTCCAG---AGAGCAGTCAAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCATTTGCTAAACCTTTTTTTTGCTAGTATATCCC-------------------------------------------------------AACGTAAATATATAAA----ATTTCTTA------TTTTTTAAA----------------GTAACATTGTA-AAGCA---AGATTATCAAC---ATACAACA--ACACCTAAGACAAC-GGAATGTTTACGCTTA--TCG-AACTGCACC-CAAAAGTCTCTCT
droGri2 scaffold_15252:4957111-4957345 + GCGTCTATCCCATACACAATCTCAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGTCCAG---AGAGCAGACAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------TCAAAA-------------------AAACTCAATGCCATTTGCTA--------TTTTGCTAGTTTATCCCACT-----------------------------------------TTGGTTTT------------------------------------TTCTTTT--AGTAATATTATATTGATATAATATTGTATAAGCACCAAG------TACAAAACACATAT--ACGCCCAAGAAAACTGGAATGT-AATGATTA--TCG-AATTGCACT-AT--------TAA
droWil2 scf2_1100000004521:8885767-8885934 - GCGTTTATCCCATACATAATCTGAAAAGTAAAGTTTGTGCGAATGAAGATGTAAGTTT--------------------------TTTTCCCACCCCCTCGTTACAAAAGACCAACTACTTCAATTATGCCACAA---------TA----CATATACCCACACACACACACATATATATATATATA--TAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAAAC----------------GTAATAT-------------------------------------------------------------------------------------------------
dp5 XR_group6:1798898-1798990 + CTCTGGTATCTTCTTTCTGTCTCTCTGGCCATACATATATATATATGTATATGTAT------------------------------------------------------------------------------------------------------------------------------A--TCTATCCTGCT------------------------------------------------------------------------------------------------------------------------------------------CTGTTC---------------------------------------CGTCTCATGTT----------------GTTGT----------------------------------------------------------------------------------------------TGT
droPer2 scaffold_1:8850001-8850056 + GCGTCTATCCCATACACAATCTGAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:3848721-3848776 + GCGTCTATCCCATACACAATCTGAAAAGTCAAGTTTGTACGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396544:54814-54885 - CTTTGCTTACTT------------------------------------------------------------------------------------TTTGCC-----------------------------CAATATAGCTATACGTTATACATACAT----ATATATATATATAAATATATA--TATGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droKik1 scf7180000302412:341300-341462 + GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGTGAAA---GTCAAAGTCCAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAACTCCAC-----------------------------------------TCCAATATCCGCCACCAACAGAGAACACACTTTTTAAAT--------CGTATTATAAATATATACATATATATCCCA-----ATATT---------------------------------------------------------------------------------------------------------------------------TAT
droFic1 scf7180000453842:373471-373526 - GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491186:899447-899534 - GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGTGAAA---GTCAAAGTCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC---------------------------------------CACTCCACTCA-------------------A------------------------------------------------------------------------------------------------CT
droRho1 scf7180000779514:134878-134994 + ATATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------ATAT----ATATATATATATATATATATA--TATATTTTGCTTTCATG------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------TATTTTAGAA----------------ACAA----------------AATGA-AATAC---GTTTAGCG-AAATCAGAGG-CAAA-GT-----T---CCTAATATTAAGC------------------TTA
droBia1 scf7180000302188:1733500-1733659 - TAGCTCTGCACAT----------------------------------------------------------------------------------------------------------------------------------TA----TATATATATATATATATATATATATATATATATATA--TATGTAGGTTTAAAAATTATAATCAGGCAGAGCTAAGCACACTCGCATATCAAATACACAACTCGAC---------------------------------------AATGCAAAACTCGCCGGCAAAGTGGCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTCAAG------------------TTT
droTak1 scf7180000414375:155246-155328 + GCCACTTTCTTTCAAATAGTTAT-----------------------------------------------------------------------------------------------------------------------------------ATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAATATATATATATATATATAAATGGGTGTCGTT-TATATATAG----------------GTTCTGTTG---------------------------------------------------------------------------------------------TA
droEug1 scf7180000409767:423269-423324 + GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:612376-612499 - ATATATAT--------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATATATATATATATA--TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACT----------------GTAACATTGTA-TAACT---TCTAT-TGTACTTGATGCATACGCATACGAAAGAGAAC-AGAATGCT---GGTAA--TAAAAA------------------TTG
droSim2 2l:20326738-20326793 - GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_0:16340194-16340298 + CTATCTTTTTTA--GCTAACCGGCTAATTCCATGTGATATATATATATATATATAT----------------------------------------------------------------------------------------------------------------ATATATATATATATAAA--TATGTACCT-ACATA------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------TTCTCTTAGT----------------ATATTA------------------------------------------------------------------------------------------------TT
droYak3 2R:1869980-1870035 + GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:3585073-3585128 + GCGTTTACCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GTGTCTATCCCATACACAATCTGAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGTCCAGAAGAGAGCAGTCGAATCGCCGCCACTTTGCTAACTTTTTGCT-----------------------------AGTTATCCCCATTTGATATATATATAT----ATATATATATATAGATATACA--TATGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTAAA----------------GTATTATTGTA-AAGCA---AGTAT-ACTAC---ATACAGCA-CACACCCAAGAAAAC-GGAATGT-AAAGCTTA--TCAAAATTGCACCTCAAA------TCASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAAGAAAAC-GGAATGT-AAAGC................................2512.002000000000000000000000000000000000000000000000000000000000002000
...............................................GATGTAAGTCCAGAAGAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000002000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAC---ATACAGCA-CACACCCAAG...................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................TTTTGCT-----------------------------AGTTATCCCCATTTGAT........................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GTGTCTATCCCATACACAATCTGAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGTCCAG---AGAGCAGTCAAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCATTTGCTAAACCTTTTTTTTGCTAGTATATCCC-------------------------------------------------------AACGTAAATATATAAA----ATTTCTTA------TTTTTTAAA----------------GTAACATTGTA-AAGCA---AGATTATCAAC---ATACAACA--ACACCTAAGACAAC-GGAATGTTTACGCTTA--TCG-AACTGCACC-CAAAAGTCTCTCTSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
GCGTCTATCCCATACACAATCTCAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGTCCAG---AGAGCAGACAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------TCAAAA-------------------AAACTCAATGCCATTTGCTA--------TTTTGCTAGTTTATCCCACT-----------------------------------------TTGGTTTT------------------------------------TTCTTTT--AGTAATATTATATTGATATAATATTGTATAAGCACCAAG------TACAAAACACATAT--ACGCCCAAGAAAACTGGAATGT-AATGATTA--TCG-AATTGCACT-AT--------TAASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droWil2
GCGTTTATCCCATACATAATCTGAAAAGTAAAGTTTGTGCGAATGAAGATGTAAGTTT--------------------------TTTTCCCACCCCCTCGTTACAAAAGACCAACTACTTCAATTATGCCACAA---------TA----CATATACCCACACACACACACATATATATATATATA--TAAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAAAC----------------GTAATAT-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...................................TGTGCGAATGAAGATGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
................................GTTTGTGCGAATGAAGATGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
......................................GCGAATGAAGATGTAAGTTT--------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
dp5
CTCTGGTATCTTCTTTCTGTCTCTCTGGCCATACATATATATATATGTATATGTAT------------------------------------------------------------------------------------------------------------------------------A--TCTATCCTGCT------------------------------------------------------------------------------------------------------------------------------------------CTGTTC---------------------------------------CGTCTCATGTT----------------GTTGT----------------------------------------------------------------------------------------------TGTSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..................................ATATATATATATGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.0510000000100
droPer2
GCGTCTATCCCATACACAATCTGAAAAGTCAAGTCTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
No Reads
droAna3
GCGTCTATCCCATACACAATCTGAAAAGTCAAGTTTGTACGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
CTTTGCTTACTT------------------------------------------------------------------------------------TTTGCC-----------------------------CAATATAGCTATACGTTATACATACAT----ATATATATATATAAATATATA--TATGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droKik1
GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGTGAAA---GTCAAAGTCCAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAACTCCAC-----------------------------------------TCCAATATCCGCCACCAACAGAGAACACACTTTTTAAAT--------CGTATTATAAATATATACATATATATCCCA-----ATATT---------------------------------------------------------------------------------------------------------------------------TATSizeHit CountTotal NormTotal
No Reads
droFic1
GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGTGAAA---GTCAAAGTCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC---------------------------------------CACTCCACTCA-------------------A------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotal
No Reads
droRho1
ATATCTAT--------------------------------------------------------------------------------------------------------------------------------------------------ATAT----ATATATATATATATATATATA--TATATTTTGCTTTCATG------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------TATTTTAGAA----------------ACAA----------------AATGA-AATAC---GTTTAGCG-AAATCAGAGG-CAAA-GT-----T---CCTAATATTAAGC------------------TTASizeHit CountTotal NormTotal
No Reads
droBia1
TAGCTCTGCACAT----------------------------------------------------------------------------------------------------------------------------------TA----TATATATATATATATATATATATATATATATATATA--TATGTAGGTTTAAAAATTATAATCAGGCAGAGCTAAGCACACTCGCATATCAAATACACAACTCGAC---------------------------------------AATGCAAAACTCGCCGGCAAAGTGGCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTCAAG------------------TTTSizeHit CountTotal NormTotal
No Reads
droTak1
GCCACTTTCTTTCAAATAGTTAT-----------------------------------------------------------------------------------------------------------------------------------ATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAATATATATATATATATATAAATGGGTGTCGTT-TATATATAG----------------GTTCTGTTG---------------------------------------------------------------------------------------------TASizeHit CountTotal NormTotal
No Reads
droEug1
GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATATATAT--------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATATATATATATATA--TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACT----------------GTAACATTGTA-TAACT---TCTAT-TGTACTTGATGCATACGCATACGAAAGAGAAC-AGAATGCT---GGTAA--TAAAAA------------------TTGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAGAGAAC-AGAATGCT---GGTAA--...........................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATACGAAAGAGAAC-AGAATGCT---GG................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCATACGAAAGAGAAC-AGAATGC......................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAAC-AGAATGCT---..................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAGAGAAC-AGAATGCT---..................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAGAGAAC-AGAATGCT---GG................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................T----------------GTAACATTGTA-TAACT---TCTAT-T.............................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAAAGAGAAC-AGAATGCT---GG................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAGAGAAC-AGAAT........................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAGAGAAC-AGAATGCT---GGT...............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA-TAACT---TCTAT-TGTACTTGATGCA.................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCATACGAAAGAGAAC-AGAAT........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TAACT---TCTAT-TGTACTTGATGCATA...............................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAAAGAGAAC-AGAATGCT---G.................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAAAGAGAAC-AGAATGCT---GGTA..............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATACGCATACGAAAGAGAAC-AGAA.........................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATACGCATACGAAAGAGAAC-AG...........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTTGATGCATACGCA...........................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................TTAAACT----------------GTAACATTGTA-TAACT---TCTA................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCATACGAAAGAGAAC-AGA..........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCATACGCATACGAAAGAGAAC-.............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAC-AGAATGCT---GGTAA--TAAAAA------------------TT.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATACGCATACGAAAGAG.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTTGATGCATACGCATACGAAAGA..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGTA-TAACT---TCTAT-TGTACTTGATGC..................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGCATACGCATACGAAAGAGAAC-.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGCATACGCATACGAAAGAGAA...............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TA--TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACT----------------GTAACATTGTA-............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACGAAAGAGAAC-AGAATGCT---GGTAA--T..........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-TGTACTTGATGCATACGCAT..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAGAGAAC-AGAATGCT---GGTA..............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGTACTTGATGCATACGCATACGA......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACGAAAGAGAAC-AGAATGCT---GGTAA--...........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGATGCATACGCATACGAAAGAGA................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAACATTGTA-TAACT---TCTAT-TGTACT........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAGAGAAC-AGAATG.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAT-TGTACTTGATGCATACGCATAC........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TAACT---TCTAT-TGTACTTGATGCA.................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGAAAGAGAAC-AGAATGCT---GGT...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAAC-AGAATGCT---GGT...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................A-TAACT---TCTAT-TGTACTTGATG...................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTGATGCATACGCATACGAAAGA..................................................2711.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGTA-TAACT---TCTAT-TGT...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TATA--TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACT----------------GTAACATTGTA-TAACT---....................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAGAGAAC-AGAATGCT---GGTAA--TA.........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATACGCATACGAAAGAGAAC-AGA..........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CT---TCTAT-TGTACTTGATGCAT................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TATATA--TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACT----------------GTAACATTGT..............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCATACGAAAGAGAAC-AGAATG.......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TATA--TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACT----------------GTAACA..................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAACATTGTA-TAACT---TCTAT-T.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AACT----------------GTAACATTGTA-TAACT---TCTAT-T.............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATACGCATACGAAAGAGAAC-AG...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGAAC-AGAATGCT---GGTAA--T..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAAC-AGAATGCT---GGTAA--TG.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGATGCATACGCATACGAAAGAG.................................................2711.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................T----------------GTAACATTGTA-TAACT---TCTAT-TGTA..........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGCATACGCATACGAA.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAAC-AGAATGCT---GGTA..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAAGAGAAC-AGAATGC......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CATTGTA-TAACT---TCTAT-TGTACT........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGCATACGCATACGAAAGAGAAC-AGAA.........................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGATGCATACGCATACGAAAGAGAAC-.............................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAC-AGAATGCT---GGTAA--TAAAAA------------------T..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAAAGAGAAC-AGAATGC......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGAGAAC-AGAATGC......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCT---GGTAA--TAAAAA------------------T..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................ATATATATATATATATATATATA.........................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TATATATATATATATATATATATA--TAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA............................................................................................................................30200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATATATATATATATATATATA--.................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ATATATATATATATATATA--TA...............................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
No Reads
droSec2
CTATCTTTTTTA--GCTAACCGGCTAATTCCATGTGATATATATATATATATATAT----------------------------------------------------------------------------------------------------------------ATATATATATATATAAA--TATGTACCT-ACATA------------------------------------------------------------------------------------------------------------------------------------------TT------------------------------------TTCTCTTAGT----------------ATATTA------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
droYak3
GCGTTTATCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
..........................AGTCAAGCTTGTAAGAACGAAGATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
droEre2
GCGTTTACCCCATACACAATCTGAAAAGTCAAGCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
................................GCTTGTAAGAACGAAGATGTAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2411.0010000010

Generated: 05/16/2015 at 10:20 PM