ID:

dvi_11211

 Coordinate:

scaffold_12963:10125333-10125483 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\Mhc-cds]; exon [dvir_GLEANR_1905:13]; intron [Dvir\Mhc-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGAAGCCGTTGGACTGGACCAAGACTTGTATCGCATTGGTAACACCAAGGCACGCATAATTTGATGTATATATTTATGTGCTAGTCAGTTAGTGTCAGTCCCCAAGGTCCAATCCAAAATGTATATCTCAATTATTTGATTGTTGCACTCACTATTTCCTCACTTTGTATACCAATCCATGTACCATGTACCATGTACCAGTTCCAGTACCAGTTCTTGTTCAAGTGCTGTGTGATCGTGTGATCATGTT
**************************************************....((((...(((..(((((((.....(((..(((.(((.((((((((((.....((......)).(((((...........))))))))))..))))).))))))....)))..))))))))))...)))).....((((...))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 M047
female body
 M027
male body		 SRR060668
160x9_males_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 V047
embryo
 M028
head
 SRR060683
160_testes_total
 SRR1106729
mixed whole adult body
 V053
head
 SRR060679
140x9_testes_total
 GSM1528803
follicle cells
.........................CTTGTATCGCATTGGTAACACCAAGGT....................................................................................................................................................................................................... 27 1 1 6.00 6 3 0 0 0 2 1 0 0 0 0 0 0 0 0 0
.................................GCATTGGTAACACCAAGGT....................................................................................................................................................................................................... 19 1 1 4.00 4 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0
.......................GACTTGTATCGCATTGGTA................................................................................................................................................................................................................. 19 0 1 3.00 3 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0
................GGACCAAGACTTGTATCGCATT..................................................................................................................................................................................................................... 22 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.GGAAGCCGTTGGACTGGACCAAGACT................................................................................................................................................................................................................................ 26 0 1 2.00 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...AAGCCGTTGGACTGGACCA..................................................................................................................................................................................................................................... 19 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
........GTTGGACTGGACCAAGACT................................................................................................................................................................................................................................ 19 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................GGACCAAGACTTGTATCGCATTG.................................................................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.GGAAGCCGTTGGACTGGACCA..................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....AGCCGTTGGACTGGACCAAGACT................................................................................................................................................................................................................................ 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..............CTGGACCAAGACTTGTATCGCA....................................................................................................................................................................................................................... 22 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................TTGTATCGCATTGGTAACACC............................................................................................................................................................................................................ 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CGCATTGGTAACACCAAGGT....................................................................................................................................................................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................CCAAGACTTGTATCGCATT..................................................................................................................................................................................................................... 19 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........TTGGACTGGACCAAGACT................................................................................................................................................................................................................................ 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.........TTGGACTGGACCAAGACTTGT............................................................................................................................................................................................................................. 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...AAGCCGTTGGACTGGACC...................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................AAGACTTGTATCGCATTGGTAACA.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CGTTGGACTGGACCAAGACT................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGTACCAGTTCCAGTACCAGT.................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....GCCGTTGGACTGGACCAAGACT................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................AAGACTTGTATCGCATTGGTAAC............................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..GAAGCCGTTGGACTGGACCA..................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TGGAAGCCGTTGGACTGGACC...................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............TGGACCAAGACTTGTATCGCATTGGTAA................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.GGAAGCCGTTGGACTGGA........................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................GGACCAAGACTTGTATCG......................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TGTATCGCATTGGTAACACCA........................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GACCAAGACTTGTATCGCATTGGTA................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CGTTGGACTGGACCAAGACTTGTATCG......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...AAGCCGTTGGACTGGACCAA.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................AGACTTGTATCGCATTGGT.................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............CTGGACCAAGACTTGTAT........................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GACTGGACCAAGACTTGTATCGC........................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................GCATTGGTAACACCAAGG........................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AAGACTTGTATCGCATTGGT.................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GACTGGACCAAGACTTGT............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................GACTTGTATCGCATTGGTAA................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................ATCGCATTGGTAACACCAAGGT....................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....AGCCGTTGGACTGGACCAAGA.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................TATCGCATTGGTAACACCAAG......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............ACTGGACCAAGACTTGTATCGCA....................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
TGGAAGCCGTTGGACTGGAC....................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TGGACCAAGACTTGTATCGC........................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.GGAAGCCGTTGGACTGGACCAA.................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........TGACTGGACCAAGACTTGTA............................................................................................................................................................................................................................ 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................GTATCGCATTGGTAACACCAAGGT....................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............TGGACCAAGACTTGTATCGCA....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................TGTATCGCATTGGTAACACCAAGGT....................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................AAGACTTGTATCGCATTGGTA................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............TGGACCAAGACTTGTATCG......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................CGCATTGGTAACACCAAGGTG...................................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..GAAGCCGTTGGACTGGACCAAGA.................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........TTGGACTGGACCAAGACTTGTATCGCA....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......TGCTTGGACTGGACCAAGACTTGTATCGC........................................................................................................................................................................................................................ 29 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GTACCAGTTCTTGTTCAAGTGCTGT................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...AAGCCGTTGGACTGGACCAAGACT................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....GCCGTTGGACTGGACCAAGACTTGTAT........................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GACTTGTATCGCATTGGTAAC............................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
TGGAAGCCGTTGGACTGGACCA..................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACCAAGACTTGTATCGCAT...................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........TTGGACTGGACCAAGACTT............................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............GACTGGACCAAGACTTGTATCG......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AGACTTGTATCGCATTGGTAAC............................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............CTGGACCAAGACTTGTATCGCATTGGT.................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................GGACCAAGACTTGTATCGC........................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........GGACTGGACCAAGACTTGTATCG......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........GTTGGACTGGACCAAGACTTGTATC.......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........TTGGACTGGACCAAGACTTGTATC.......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......CGTTGGACTGGACCAAGACTTGT............................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................CAAGACTTGTATCGCATTGGT.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................AAGACTTGTATCGCATTGGTAACAC............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................CTTGTATCGCATTGGTAACACCAA.......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GACTTGTATCGCATTGGTAACA.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............CTGGACCAAGACTTGTATCGCATTGGTA................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............TGGACCAAGACTTGTATCGCATT..................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................GTATCGCATTGGTAACACC............................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................GACTTGTATCGCATTGTT.................................................................................................................................................................................................................. 18 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............ACTGGACAAAGACTCGTA............................................................................................................................................................................................................................ 18 2 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCAAGAGCGGTGTGATCGGG.......... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...............TGGACCAAGACTTGATTTGC........................................................................................................................................................................................................................ 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................TGACTAGTTCCTCACTTAGT.................................................................................. 20 3 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............................................AAGGCATGCATATGTTGATGTA...................................................................................................................................................................................... 22 3 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................GTGGTCGTCAGCTAGTGTC.......................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................CTCACCATTTCCTCCCTGT.................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ACCTTCGGCAACCTGACCTGGTTCTGAACATAGCGTAACCATTGTGGTTCCGTGCGTATTAAACTACATATATAAATACACGATCAGTCAATCACAGTCAGGGGTTCCAGGTTAGGTTTTACATATAGAGTTAATAAACTAACAACGTGAGTGATAAAGGAGTGAAACATATGGTTAGGTACATGGTACATGGTACATGGTCAAGGTCATGGTCAAGAACAAGTTCACGACACACTAGCACACTAGTACAA
**************************************************....((((...(((..(((((((.....(((..(((.(((.((((((((((.....((......)).(((((...........))))))))))..))))).))))))....)))..))))))))))...)))).....((((...))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 V116
male body		 SRR1106729
mixed whole adult body
 SRR060665
9_females_carcasses_total
 M027
male body		 M028
head
 SRR060686
Argx9_0-2h_embryos_total
 SRR060668
160x9_males_carcasses_total
 SRR060687
9_0-2h_embryos_total
 M047
female body
....................................................................................AAGTCAATCACAGCCAGTGGTT................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................CGGGCAATCACAGTCAGTGGTT................................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
......................................................................................GCCAATCACAGCCACGGGTT................................................................................................................................................. 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................CGCCAATCACAGTCAGTGGTT................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................GGTTTAACATAGAGAGTTA...................................................................................................................... 19 2 6 0.33 2 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TGAGTAATAAAGCAGTGA...................................................................................... 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................AGGGTTGGGAACATGGTAC.............................................................. 19 3 10 0.30 3 0 1 0 0 0 0 0 1 1 0
.........................................................................................AATCGCAGTCAGTAGTTCCA.............................................................................................................................................. 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................GGTTGGGAACATGGTACCT............................................................ 19 3 9 0.22 2 0 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................CCAGAACAAGTTCTCGATAC.................. 20 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................CAGAACAAGTTCTCGATACA................. 20 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0
......................................CCAATGTTGTTCCGTGCGTT................................................................................................................................................................................................. 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................AGTCAGGAGTTCCAGAGTA......................................................................................................................................... 19 3 11 0.09 1 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................CGTATGGTTAGGTACCGGGT................................................................ 20 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0
......................................CAGATGTGGTTCCGTGCGT.................................................................................................................................................................................................. 19 3 18 0.06 1 0 1 0 0 0 0 0 0 0 0
........................................................................................CAATCACAGGCAGTGGGT................................................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................TCAGGGGTTCATGGTTAGT....................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:10125283-10125533 + dvi_11211 TGGAAGCCGTTGGACTGGACCAAGACTTGTATCGCATTGGTAACACCAAGGCACGCATAATT------------------TGAT------GT----------ATATATTTATG------TGCTAGTC-----------------AGTTAGTGTCAGTC----------CCCAAGGTCC--------AATCCAAAATGTATATC-T-------CAATTATTT----GA-----------------------------------TTGTTGCACTCACTATTTCCTCACTTTGTATACCAATCCATGTAC-------------CA----TGTAC------------CATGT-----------------------------------ACCAGT-TCCAG--TAC---------------CAGTTCTTGTTCAAGTGCTGTG-----------------------------------------TG------------ATCGTGTGATCATGTT--------------------------
droMoj3 scaffold_6500:2805442-2805631 + TGGAAGCGGTTGGACTGGACCCCGACTTGTATCGCATTGGTAACACCAAGGCACGCATACTT------------------TAAT------------------GTA--------------TATTC-ACT-------TGTTGTTT-AGAT------------AA-----ACCCAAGGTCC--------AATCCA-CATGTAAATC-AA--------------CTATCGTAT----CC--TC------------ACTC---T--T-----------------------------------------------------------C----TGTTCT-------GCACCAAAA-----------------------------------TCCAAT------------------GT---------------ATCAAGTGCTGTCTTCC-------------------------TAT--------------------------TTATAT----------A----------------------
droGri2 scaffold_15252:13259528-13259762 + TGGAAGCCGTTGGACTGGACCAAGACTTGTATCGCATTGGTAACACCAAGGCACGCATACTT------------------AAAT---------A--------GTA--------------TATTC-TCCGTTTT--TTTTGTTT-AG----TGT-AGTCCACT-----ACCAGTTGTCCACA----CAATCCA-ATTGTATATC-AACTATT-C----TCG-TATTTTAT----CC--TC------------AC--------------------------------------------------------------------------GTACC-------TCAACAAAT-----------------------------------TCCATT------TGTACCAATATCTT------------TTGTTCTAATGCTGTGCC---------------------------TAT---ATCATG------------------TTGATGA------------------------TCATGAT
droWil2 scf2_1100000004577:1134983-1135233 + TAGAAGCTGTTGGACTGGAACCCGATATGTATCGCATTGGTCACACTAAGGCACGCAAAAATTCCAAAACCAAACAAAAAAAAAA--------GTTCCC----AA--------------GATTT-AGT-------TTT-GAGT-TC---------G---TTA-----AGCGAATGCTCCATAAGATATTCCA-ATTGTATCACTTAGTGTACC----ACCC-------------------------------------T--CTG--CCCTTC----------------TGT----------AA-AACCACCAAACCACCCCGA--TT------------G-------------------------------------------------------------------------------------------------CCCCCCCCAAAAAAATGCGAGTCCTTGTCTAT---A-----TA------------TA--TGTATATCTATTT--A----------------------
dp5 4_group3:3002564-3002846 - TGGAAGCCGTCGGACTGGATCCCGATATGTATCGCATTGGTCACACCAAGGCACGCATACA----------------------ACTTGCTAT---------CTTT-TGTCCTA------TATTTGTCC-------TT--GTAT-AT-------------CCATGCCGAACGAATGTCCTAC----CATTCCA-ATTGTATCTC-T-------C----TCTCAA-----C----CCCGTC------------ACTT---G--TAT--TACCTC--------------TTTGT----------ATGTAC-------------CA----TGTACCA--TGTA---ACAGAATAGTTCCGTTCCAGTTACCAGTTTTCAGTTACCAAAT----TTCCAGTGCTC---------------CAGTTCCAGTTCCAGTGCTGTGCC---------------------------TAT---------------------GTTAGATGTATC--------------------------------
droPer2 scaffold_1:4489090-4489201 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTAC-------------CA----TGTACCA--TGTA---ACAGAATAGTTCCGTTCCAGTTACCAGTTTTCAGTTACCAAAT----TTCCAGTGCTC---------------CAGTTCCAGTTCCAGTGCTGTGCC---------------------------TAT---------------------GTTAGATGTATC--------------------------------
droAna3 scaffold_12916:7337274-7337530 + TGGAAGCCGTCGGACTGGATCCCGATATGTATCGCATTGGTCACACCAAGGCACGCATAAA----------------------AG---ATATCCTTTCCCCCGTA--------------TATCC-AAC----TATTT--GTAT-AT-------------CCA-----AGCGAATGTCCT------TGCTCCA-AACGTATCAC-TAGTGTGT-------------GAATTTTACC--CC------------TCAATTTG--TTTTTATCCTTTATTATGTCC----TTTTT----------TTGTAT------------------------------------CATAT-----------------------------------ATCAGT-----------------TTT------------CAGTTCCAGTGCTGTGCCTTCTTC------------------------AATATTATGTAATTGTAATATGTTAGGT-------------------------------------
droBip1 scf7180000396566:506928-507173 + TGGAAGCCGTCGGACTGGATCCCGATATGTATCGCATTGGTCACACCAAGGCACGCATACAA------------------GACA-------TCCTTTCCCCCTTT--------------TATCC-AAC-------TTTTGTAT-AT-------------CCA-----AGCGAATGTCCT------TGCTCCA-AACGTATCAC-TAGTGTGT-------------GAAT----TCCCCC------------ACTT--TG--TTA-TATCCT----------------TTAT----------TTGTCC-------------TTT--TT------------GTACCATAT-----------------------------------ATCAGT-----------------TTT------------CAGTTCCAGTGCTGTGCCTTCTTC---------------------TA-AATATTATGTAATTGTA-----------------------------------------ATATGTT
droKik1 scf7180000302472:43844-44074 + TGGAAGCCGTCGGACTGGACCCCGACATGTATCGCATTGGTCACACCAAGGCACGCATATAT------------------AA------------CTCCCCTTTCA--------AAT---TATCC-ACT-------TT--GTAT-AT-------------CCA-----AGCGAATGTCCA------TGCTCCA-ACTGTATCAC-TAGTGTATC----TCGCTCTTGA-T----TC--CC------------ACTT---G--TTT--CTCCTC--------------TTTGT----------ATGTAC-------------CA----TGTAC------------CAAAA-----------------------------------ATCAGT------------------TC------CAGTTCCAGTTCCAGTGCTGTGCCTC-------------------------TAT---------------------GTTAGGT-------------------------------------
droFic1 scf7180000454078:704551-704808 + TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAGA---------GTTTCTTATTTA------T--ATATCACTTC-ACT------TTT--GTAT-AT-------------GCA-----AGCGAATGTCCT------TACGCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CCTGAACCAGAACCACTT---GTGTTG--CTCCTC--------------GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAATATCCAG--C---------TC------CAGTTTCAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTTTATT---------A----------------------
droEle1 scf7180000490579:564916-565151 - TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACTTAT------------------AAAG---------ATTCCCTTTTTA--------------TATCC-ACT-------TT--GCAT-AT-------------GCA-----AGCGAATGTCCT------CACTCCA-ACTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTT--CTCCTC--------------GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAAC------------------TC------------CAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTGCGTCTCAA-------------------GTC
droRho1 scf7180000780103:204599-204852 - TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACTAAGGCACGCACGCAT------------------ACAA---------ATTTCCTTTTTA--------------TATCC-ACT-------TT--GCAT-AT-------------GCA-----AGCGAATGTCCT------CACTCCA-ATTGTATGAC-TAGTGTATT----TTTCAATTGA-T----CC--CC------------ACTT---G--TTG--CTCCTC--------------GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAAC------------------TC------------AAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTGCGTCTCAATTCTAACCCTGTGTATCACGAT
droBia1 scf7180000301468:945544-945790 + TGGAAGCCGTCGGACTGGACCCCGATATGTACCGCATTGGTCACACCAAGGCACGC--------------------------------------TTTCCTTTTTT--------AA----TATTC-ACC-------TT--TCGTCTT-------------GCA-----AGCGAATGTCCT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCGATTGAAT----CC--CC------------ACTT---G--TTT--CTCCTC--------------GTTGT----------ATGTAC-------------CAT--ATGTACCA--TGTA---TTAG----------------------------------CAAATCAAC-TCCAG--TTC---------------CAGTTCCAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTCCGTCTTAA----------------------
droTak1 scf7180000415914:524316-524568 + TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAGAG--------TTTTACTTTTTA--------AATCCAAATCC-ACC-------TT--TCGT-AT-------------GCT-----AGCGAATGTCCT------TACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATCGAAT----CC--CC------------ACTT---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CATATATGTACCATATGTA---TCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTCCGTCTTAA----------------------
droEug1 scf7180000408961:350609-350838 + TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGAACGCA---------------------------------CTTCCTTTTTT-TA---T--A----AATCC-TAC-------TT--GTAT-AT-------------GCA-----AGCAAATGTCCT------TATTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTT--CTCCTC---------C----GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAAT------------------TC------------CAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATATCCGTCTT------------------------
dm3 chr2L:16777699-16777938 + TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAA------------------AAAAA--------TTTTCCTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACAC---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------
droSim2 2l:16344359-16344598 + TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAAA---------TTTTCCTTATTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACAC---G--TTG--ATCCTC---------C----GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------
droSec2 scaffold_7:424422-424661 + TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAAA---------TTTTCCTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACAC---G--TTG--ATCCTC---------C----GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------
droYak3 2R:4324159-4324390 - TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAAA---------TGTTCTTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATCAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CA----TGTACC-------GTGCCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCC-----------------------------
droEre2 scaffold_4845:19848333-19848580 + TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGATT------------------ACAAA--------TTTTCCTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAT-----------------------------------ATCAAT------------------TCCAGTTTCAGT----GCTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGGAAGCCGTTGGACTGGACCAAGACTTGTATCGCATTGGTAACACCAAGGCACGCATAATT------------------TGAT------GT----------ATATATTTATG------TGCTAGTC-----------------AGTTAGTGTCAGTC----------CCCAAGGTCC--------AATCCAAAATGTATATC-T-------CAATTATTT----GA-----------------------------------TTGTTGCACTCACTATTTCCTCACTTTGTATACCAATCCATGTAC-------------CA----TGTAC------------CATGT-----------------------------------ACCAGT-TCCAG--TAC---------------CAGTTCTTGTTCAAGTGCTGTG-----------------------------------------TG------------ATCGTGTGATCATGTT--------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................CTTGTATCGCATTGGTAACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.006000000000000002013000000000000000000000000000000000000000000000
.................................GCATTGGTAACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004000000000000000112000000000000000000000000000000000000000000000
.......................GACTTGTATCGCATTGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003000000000000000110100000000000000000000000000000000000000000000
................GGACCAAGACTTGTATCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002001000000000000000100000000000000000000000000000000000000000000
.GGAAGCCGTTGGACTGGACCAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002011000000000000000000000000000000000000000000000000000000000000
...AAGCCGTTGGACTGGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000001001000000000000000000000000000000000000000000000
........GTTGGACTGGACCAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000001100000000000000000000000000000000000000000000
................GGACCAAGACTTGTATCGCATTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
.GGAAGCCGTTGGACTGGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002101000000000000000000000000000000000000000000000000000000000000
....AGCCGTTGGACTGGACCAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000000000000000000000000000000000000000000000000000000000000
..............CTGGACCAAGACTTGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002101000000000000000000000000000000000000000000000000000000000000
..........................TTGTATCGCATTGGTAACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
................................CGCATTGGTAACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000001100000000000000000000000000000000000000000000
...................CCAAGACTTGTATCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000001010000000000000000000000000000000000000000000
.........TTGGACTGGACCAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000000000000000000000000000000000000000000000000000000000000
.........TTGGACTGGACCAAGACTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100000000000000001000000000000000000000000000000000000000000000
...AAGCCGTTGGACTGGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000010000000000000000000000000000000000000000000000
.....................AAGACTTGTATCGCATTGGTAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......CGTTGGACTGGACCAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGT-----------------------------------ACCAGT-TCCAG--TAC---------------CAGT...................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....GCCGTTGGACTGGACCAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.....................AAGACTTGTATCGCATTGGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..GAAGCCGTTGGACTGGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
TGGAAGCCGTTGGACTGGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
...............TGGACCAAGACTTGTATCGCATTGGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
.GGAAGCCGTTGGACTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
................GGACCAAGACTTGTATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
...........................TGTATCGCATTGGTAACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.................GACCAAGACTTGTATCGCATTGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......CGTTGGACTGGACCAAGACTTGTATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
...AAGCCGTTGGACTGGACCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
......................AGACTTGTATCGCATTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..............CTGGACCAAGACTTGTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
............GACTGGACCAAGACTTGTATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.................................GCATTGGTAACACCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.....................AAGACTTGTATCGCATTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............GACTGGACCAAGACTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
.......................GACTTGTATCGCATTGGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............................ATCGCATTGGTAACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
....AGCCGTTGGACTGGACCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.............................TATCGCATTGGTAACACCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.............ACTGGACCAAGACTTGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
TGGAAGCCGTTGGACTGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...............TGGACCAAGACTTGTATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.GGAAGCCGTTGGACTGGACCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
............................GTATCGCATTGGTAACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
...............TGGACCAAGACTTGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................TGTATCGCATTGGTAACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................AAGACTTGTATCGCATTGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...............TGGACCAAGACTTGTATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
................................CGCATTGGTAACACCAAGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..GAAGCCGTTGGACTGGACCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
.........TTGGACTGGACCAAGACTTGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................G--TAC---------------CAGTTCTTGTTCAAGTGCTGT..................................................................................................2511.001000000000000000000000000000000000100000000000000000000000000000
...AAGCCGTTGGACTGGACCAAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
.....GCCGTTGGACTGGACCAAGACTTGTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.......................GACTTGTATCGCATTGGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
TGGAAGCCGTTGGACTGGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................ACCAAGACTTGTATCGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.........TTGGACTGGACCAAGACTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
............GACTGGACCAAGACTTGTATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................AGACTTGTATCGCATTGGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000100000
..............CTGGACCAAGACTTGTATCGCATTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
................GGACCAAGACTTGTATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
...........GGACTGGACCAAGACTTGTATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
........GTTGGACTGGACCAAGACTTGTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
.........TTGGACTGGACCAAGACTTGTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.......CGTTGGACTGGACCAAGACTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
....................CAAGACTTGTATCGCATTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....................AAGACTTGTATCGCATTGGTAACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
.........................CTTGTATCGCATTGGTAACACCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.......................GACTTGTATCGCATTGGTAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
..............CTGGACCAAGACTTGTATCGCATTGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
...............TGGACCAAGACTTGTATCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................GTATCGCATTGGTAACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGGAAGCGGTTGGACTGGACCCCGACTTGTATCGCATTGGTAACACCAAGGCACGCATACTT------------------TAAT------------------GTA--------------TATTC-ACT-------TGTTGTTT-AGAT------------AA-----ACCCAAGGTCC--------AATCCA-CATGTAAATC-AA--------------CTATCGTAT----CC--TC------------ACTC---T--T-----------------------------------------------------------C----TGTTCT-------GCACCAAAA-----------------------------------TCCAAT------------------GT---------------ATCAAGTGCTGTCTTCC-------------------------TAT--------------------------TTATAT----------A----------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................CTTGTATCGCATTGGTAACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
....AGCGGTTGGACTGGACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droGri2
TGGAAGCCGTTGGACTGGACCAAGACTTGTATCGCATTGGTAACACCAAGGCACGCATACTT------------------AAAT---------A--------GTA--------------TATTC-TCCGTTTT--TTTTGTTT-AG----TGT-AGTCCACT-----ACCAGTTGTCCACA----CAATCCA-ATTGTATATC-AACTATT-C----TCG-TATTTTAT----CC--TC------------AC--------------------------------------------------------------------------GTACC-------TCAACAAAT-----------------------------------TCCATT------TGTACCAATATCTT------------TTGTTCTAATGCTGTGCC---------------------------TAT---ATCATG------------------TTGATGA------------------------TCATGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................AGACTTGTATCGCATTGGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
..GAAGCCGTTGGACTGGACCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
............GACTGGACCAAGACTTGTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
droWil2
TAGAAGCTGTTGGACTGGAACCCGATATGTATCGCATTGGTCACACTAAGGCACGCAAAAATTCCAAAACCAAACAAAAAAAAAA--------GTTCCC----AA--------------GATTT-AGT-------TTT-GAGT-TC---------G---TTA-----AGCGAATGCTCCATAAGATATTCCA-ATTGTATCACTTAGTGTACC----ACCC-------------------------------------T--CTG--CCCTTC----------------TGT----------AA-AACCACCAAACCACCCCGA--TT------------G-------------------------------------------------------------------------------------------------CCCCCCCCAAAAAAATGCGAGTCCTTGTCTAT---A-----TA------------TA--TGTATATCTATTT--A----------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....GCTGTTGGACTGGAACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18152.0052520000
....AGCTGTTGGACTGGAACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19145.0045450000
..GAAGCTGTTGGACTGGAACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21144.0044440000
...AAGCTGTTGGACTGGAACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20134.0034330100
.AGAAGCTGTTGGACTGGAACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22115.0015150000
TAGAAGCTGTTGGACTGGAACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23115.0015150000
.......................GATATGTATCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19115.0015150000
....AGCTGTTGGACTGGAACCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20113.0013130000
TAGAAGCTGTTGGACTGGAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.001090100
.....GCTGTTGGACTGGAACCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1918.00870100
....AGCTGTTGGACTGGAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1818.00880000
...AAGCTGTTGGACTGGAACCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.00770000
..GAAGCTGTTGGACTGGAACCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.00770000
..GAAGCTGTTGGACTGGAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.00770000
....AGCTGTTGGACTGGAACCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.00660000
.....GCTGTTGGACTGGAACCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.00660000
........................ATATGTATCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.00660000
...AAGCTGTTGGACTGGAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.00650001
...AAGCTGTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.00550000
....AGCTGTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.00550000
..GAAGCTGTTGGACTGGAACCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.00550000
.AGAAGCTGTTGGACTGGAACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.00550000
..GAAGCTGTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.00550000
...AAGCTGTTGGACTGGAACCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00440000
.....GCTGTTGGACTGGAACCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00440000
....AGCTGTTGGACTGGAACCCGATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.00440000
.AGAAGCTGTTGGACTGGAACCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00330000
...AAGCTGTTGGACTGGAACCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00330000
..............................ATCGCATTGGTCACACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00330000
TAGAAGCTGTTGGACTGGAACCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00330000
TAGAAGCTGTTGGACTGGAACCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00330000
TAGAAGCTGTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00220000
.AGAAGCTGTTGGACTGGAACCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000
........................ATATGTATCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
.....GCTGTTGGACTGGAACCCGATATGTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00220000
TAGAAGCTGTTGGACTGGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
.....GCTGTTGGACTGGAACCCGATATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000
........GTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
.....GCTGTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
...AAGCTGTTGGACTGGAACCCGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000
.AGAAGCTGTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000
TAGAAGCTGTTGGACTGGAACCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
...AAGCTGTTGGACTGGAACCCGATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
.......................GATATGTATCGCATTGGTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.......TGTTGGACTGGAACCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.....GCTGTTGGACTGGAACCCGATATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
......................CGATATGTATCGCATTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
....................................................................................A--------GTTCCC----AA--------------GATTT-AGT-------T..............................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.AGAAGCTGTTGGACTGGAACCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
.......TGTTGGACTGGAACCCGATATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
TAGAAGCTGTTGGACTGGAACCCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
.........................................................................................................................TTT-AGT-------TTT-GAGT-TC---------G---TTA-----AGC............................................................................................................................................................................................................................................................................................................................................................................2211.00100010
....AGCTGTTGGACTGGAACCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
....AGCTGTTGGACTGGAACCCGATATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
......CTGTTGGACTGGAACCCGATATGTATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
.......TGTTGGACTGGAACCCGATATGTATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
TAGAAGCTGTTGGACTGGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
..GAAGCTGTTGGACTGGAACCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.......................GATATGTATCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
......................CGATATGTATCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
..........................................................................................................................................................................................ATTCCA-ATTGTATCACTTAGT......................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................TATGTATCGCATTGGTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.........................TATGTATCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..........................ATGTATCGCATTGGTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.........................TATGTATCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
.....GCTGTTGGACTGGAACCCGATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
dp5
TGGAAGCCGTCGGACTGGATCCCGATATGTATCGCATTGGTCACACCAAGGCACGCATACA----------------------ACTTGCTAT---------CTTT-TGTCCTA------TATTTGTCC-------TT--GTAT-AT-------------CCATGCCGAACGAATGTCCTAC----CATTCCA-ATTGTATCTC-T-------C----TCTCAA-----C----CCCGTC------------ACTT---G--TAT--TACCTC--------------TTTGT----------ATGTAC-------------CA----TGTACCA--TGTA---ACAGAATAGTTCCGTTCCAGTTACCAGTTTTCAGTTACCAAAT----TTCCAGTGCTC---------------CAGTTCCAGTTCCAGTGCTGTGCC---------------------------TAT---------------------GTTAGATGTATC--------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................GATATGTATCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040002020000
.......................GATATGTATCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040200020000
....AGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030100020000
.......................GATATGTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030003000000
.......................GATATGTATCGCATTGGTCACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000020000
..GAAGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000011000
.....................CCGATATGTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020001010000
.......................GATATGTATCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020101000000
.......................GATATGTATCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
.............ACTGGATCCCGATATGTATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
TGGAAGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.............................TATCGCATTGGTCACACCAAGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................TATGTATCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
......CCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
.....................CCGATATGTATCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.......CGTCGGACTGGATCCCGATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............CTGGATCCCGATATGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
...AAGCCGTCGGACTGGATCCCGATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010000
.GGAAGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................ATCCCGATATGTATCGCATTGGTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
...................TCCCGATATGTATCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000000
......................CGATATGTATCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................GGATCCCGATATGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
TGGAAGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................ATGTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
....................CCCGATATGTATCGCATTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
........GTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........GGACTGGATCCCGATATGTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................CCCGATATGTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
................................CGCATTGGTCACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
............GACTGGATCCCGATATGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010000
...AAGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
....AGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000000
..........................ATGTATCGCATTGGTCACACCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000
................GGATCCCGATATGTATCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..GAAGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
............GACTGGATCCCGATATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000010000
...........GGACTGGATCCCGATATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
droPer2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTAC-------------CA----TGTACCA--TGTA---ACAGAATAGTTCCGTTCCAGTTACCAGTTTTCAGTTACCAAAT----TTCCAGTGCTC---------------CAGTTCCAGTTCCAGTGCTGTGCC---------------------------TAT---------------------GTTAGATGTATC--------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................ATAGTTCCGTTCCAGTTACC.......................................................................................................................................................................2011.001000010
droAna3
TGGAAGCCGTCGGACTGGATCCCGATATGTATCGCATTGGTCACACCAAGGCACGCATAAA----------------------AG---ATATCCTTTCCCCCGTA--------------TATCC-AAC----TATTT--GTAT-AT-------------CCA-----AGCGAATGTCCT------TGCTCCA-AACGTATCAC-TAGTGTGT-------------GAATTTTACC--CC------------TCAATTTG--TTTTTATCCTTTATTATGTCC----TTTTT----------TTGTAT------------------------------------CATAT-----------------------------------ATCAGT-----------------TTT------------CAGTTCCAGTGCTGTGCCTTCTTC------------------------AATATTATGTAATTGTAATATGTTAGGT-------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................GATATGTATCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.006200004
.......................GATATGTATCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.006000006
TGGAAGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
.......................GATATGTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003100002
.......................GATATGTATCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003100011
...AAGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003000012
..........CGGACTGGATCCCGATATGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003100002
............................GTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002110000
...AAGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
...AAGCCGTCGGACTGGATCCCGATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.GGAAGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
...........................TGTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
............................GTATCGCATTGGTCACACCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
..GAAGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100001
...........................TGTATCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
................GGATCCCGATATGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
............GACTGGATCCCGATATGTATCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000002
..........CGGACTGGATCCCGATATGTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
...............TGGATCCCGATATGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000101
............GACTGGATCCCGATATGTATCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
....................CCCGATATGTATCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
..............................ATCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..GAAGCCGTCGGACTGGATCCCGATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...........GGACTGGATCCCGATATGTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................CCGATATGTATCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
....AGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................CCGATATGTATCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....................................TTGGTCACACCAAGGCACGCATAAA----------------------AG---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
TGGAAGCCGTCGGACTGGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................................................GCATAAA----------------------AG---ATATCCTTTCCCCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..GAAGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
....AGCCGTCGGACTGGATCCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.GGAAGCCGTCGGACTGGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................ATGTATCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
TGGAAGCCGTCGGACTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....AGCCGTCGGACTGGATCCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....AGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
....AGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............GACTGGATCCCGATATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....AGCCGTCGGACTGGATCCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................ATCGCATTGGTCACACCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....AGCCGTCGGACTGGATCCCGATATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.......................GATATGTATCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
............GACTGGATCCCGATATGTATCGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...AAGCCGTCGGACTGGATCCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................GGATCCCGATATGTATCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
TGGAAGCCGTCGGACTGGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..............................ATCGCATTGGTCACACCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................GTATCGCATTGGTCACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
TGGAAGCCGTCGGACTGGATCCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
................GGATCCCGATATGTATCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.GGAAGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droBip1
TGGAAGCCGTCGGACTGGATCCCGATATGTATCGCATTGGTCACACCAAGGCACGCATACAA------------------GACA-------TCCTTTCCCCCTTT--------------TATCC-AAC-------TTTTGTAT-AT-------------CCA-----AGCGAATGTCCT------TGCTCCA-AACGTATCAC-TAGTGTGT-------------GAAT----TCCCCC------------ACTT--TG--TTA-TATCCT----------------TTAT----------TTGTCC-------------TTT--TT------------GTACCATAT-----------------------------------ATCAGT-----------------TTT------------CAGTTCCAGTGCTGTGCCTTCTTC---------------------TA-AATATTATGTAATTGTA-----------------------------------------ATATGTTSizeHit CountTotal NormTotal
No Reads
droKik1
TGGAAGCCGTCGGACTGGACCCCGACATGTATCGCATTGGTCACACCAAGGCACGCATATAT------------------AA------------CTCCCCTTTCA--------AAT---TATCC-ACT-------TT--GTAT-AT-------------CCA-----AGCGAATGTCCA------TGCTCCA-ACTGTATCAC-TAGTGTATC----TCGCTCTTGA-T----TC--CC------------ACTT---G--TTT--CTCCTC--------------TTTGT----------ATGTAC-------------CA----TGTAC------------CAAAA-----------------------------------ATCAGT------------------TC------CAGTTCCAGTTCCAGTGCTGTGCCTC-------------------------TAT---------------------GTTAGGT-------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAGA---------GTTTCTTATTTA------T--ATATCACTTC-ACT------TTT--GTAT-AT-------------GCA-----AGCGAATGTCCT------TACGCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CCTGAACCAGAACCACTT---GTGTTG--CTCCTC--------------GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAATATCCAG--C---------TC------CAGTTTCAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTTTATT---------A----------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACTTAT------------------AAAG---------ATTCCCTTTTTA--------------TATCC-ACT-------TT--GCAT-AT-------------GCA-----AGCGAATGTCCT------CACTCCA-ACTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTT--CTCCTC--------------GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAAC------------------TC------------CAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTGCGTCTCAA-------------------GTCSizeHit CountTotal NormTotal
No Reads
droRho1
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACTAAGGCACGCACGCAT------------------ACAA---------ATTTCCTTTTTA--------------TATCC-ACT-------TT--GCAT-AT-------------GCA-----AGCGAATGTCCT------CACTCCA-ATTGTATGAC-TAGTGTATT----TTTCAATTGA-T----CC--CC------------ACTT---G--TTG--CTCCTC--------------GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAAC------------------TC------------AAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTGCGTCTCAATTCTAACCCTGTGTATCACGATSizeHit CountTotal NormTotal
No Reads
droBia1
TGGAAGCCGTCGGACTGGACCCCGATATGTACCGCATTGGTCACACCAAGGCACGC--------------------------------------TTTCCTTTTTT--------AA----TATTC-ACC-------TT--TCGTCTT-------------GCA-----AGCGAATGTCCT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCGATTGAAT----CC--CC------------ACTT---G--TTT--CTCCTC--------------GTTGT----------ATGTAC-------------CAT--ATGTACCA--TGTA---TTAG----------------------------------CAAATCAAC-TCCAG--TTC---------------CAGTTCCAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTCCGTCTTAA----------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAGAG--------TTTTACTTTTTA--------AATCCAAATCC-ACC-------TT--TCGT-AT-------------GCT-----AGCGAATGTCCT------TACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATCGAAT----CC--CC------------ACTT---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CATATATGTACCATATGTA---TCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATCTCCGTCTTAA----------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGAACGCA---------------------------------CTTCCTTTTTT-TA---T--A----AATCC-TAC-------TT--GTAT-AT-------------GCA-----AGCAAATGTCCT------TATTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTT--CTCCTC---------C----GTTGT----------ATGTAC-------------CA----TGTAC------------CAGAA-----------------------------------ATCAAT------------------TC------------CAGTTCCAGTGCTGTG------------------------------------------------------TTAGGTGTATATCCGTCTT------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAA------------------AAAAA--------TTTTCCTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACAC---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................TGTACCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000200000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGATCCCGATATGTACCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGTACCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCCGTCGGACTGGATCCCGATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGTACCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGAAGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.GGAAGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGATCCCGATATGTACCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGTACCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGCCGTCGGACTGGATCCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....AGCCGTCGGACTGGATCCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
........................ATATGTACCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGTACCGCATTGGTCACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TACCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCGTCGGACTGGATCCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCCGATATGTACCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACCGCATTGGTCACACCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGAAGCCGTCGGACTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................CTCCA-ATTGTATGAC-TAGTGTA...................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGTACCGCATTGGTCACACCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATGTACCGCATTGGTCACACCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................TCCCGATATGTACCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ACCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAAGCCGTCGGACTGGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........GGACTGGATCCCGATATGTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATCCCGATATGTACCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGTACCGCATTGGTCACACCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGACTGGATCCCGATATGTACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGATCCCGATATGTACCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGAAGCCGTCGGACTGGATCCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGACTGGATCCCGATATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTCACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGATCCCGATATGTACCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCCGATATGTACCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGCCGTCGGACTGGATCCCGATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCGATATGTACCGCATTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCGATATGTACCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGACTGGATCCCGATATGTACCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGGACTGGATCCCGATATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATGTACCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATGTACCGCATTGGTCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTCGGACTGGATCCCGATATGTACCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGCCGTCGGACTGGATCCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........CGGACTGGATCCCGATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................A-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGC.....................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGATCCCGATATGTACCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGTACCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGATATGTACCGCATTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................A-ATTGTATGAC-TAGTGTATC----TTT..........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................GCATTGGTCACACCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GAAGCCGTCGGACTGGATCCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGATATGTACCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TATGTACCGCATTGGTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTACCGCATTGGTCACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGGAAGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGGACTGGATCCCGATATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGTACCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTCACACCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GATATGTACCGCATTGGTCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCCGATATGTACCGCATTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACCAAGGCACGCACGCAA------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATATGTACCGCATTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGTCGGACTGGATCCCGATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGATATGTACCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAAA---------TTTTCCTTATTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACAC---G--TTG--ATCCTC---------C----GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....GCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..........................................................................................................................................................................................................................................C--CC------------ACAC---G--TTG--ATCCTC---------C----GTTGT----------ATG......................................................................................................................................................................................................................................2611.00100100000000000000
..................................................................................................................................................................................................................................................................G--TTG--ATCCTC---------C----GTTGT----------AT.......................................................................................................................................................................................................................................1811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCTGTG-----------------------------------------TT------------TAGGT.....................................1811.00100000000000100000
droSec2
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAAA---------TTTTCCTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACAC---G--TTG--ATCCTC---------C----GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................GGATCCCGATATGTACCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.....GCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
............GACTGGATCCCGATATGTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
........GTCGGACTGGATCCCGATATGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
....AGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
droYak3
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGCAT------------------AAAA---------TGTTCTTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATCAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CA----TGTACC-------GTGCCAGAA-----------------------------------ATCAAT------------------TC------------CAGTTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCC-----------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCT...............................2511.00100000010000
.GGAAGCCGTCGGACTGGATCCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................ATCCCGATATGTACCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....GCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..........................ATGTACCGCATTGGTCACACCAAGGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.................GATCCCGATATGTACCGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
TGGAAGCCGTCGGACTGGATCCCGATATGTACCGCATTGGTCACACCAAGGCACGCACGATT------------------ACAAA--------TTTTCCTTTTTA--------------TATCC-ACC-------TT--GTGT-AT-------------GCA-----AGCGAATGTACT------CACTCCA-ATTGTATGAC-TAGTGTATC----TTTCAATTGAAT----CC--CC------------ACTT---G--TTG--ATCCTC--------------GTTGT----------ATGTAC-------------CA----TGTACC-------GTACCAGAT-----------------------------------ATCAAT------------------TCCAGTTTCAGT----GCTTCAGTGCTGTG-----------------------------------------TT------------TAGGTGTATCTCCGTCTTAA----------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....AGCCGTCGGACTGGATCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
.......................GATATGTACCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
TGGAAGCCGTCGGACTGGATCCCGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
..GAAGCCGTCGGACTGGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...............................................................................................................................................................GCA-----AGCGAATGTACT------CACTCCA-.....................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..............................................................................................................................................................................GTACT------CACTCCA-ATTGTATGAC-TAGT......................................................................................................................................................................................................................................................................................................................................2611.0010001000
.................................................................................................................................................................................................................................GAAT----CC--CC------------ACTT---G--TTG--ATCCT.......................................................................................................................................................................................................................................................................2111.0010100000
...AAGCCGTCGGACTGGATCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..........................ATGTACCGCATTGGTCACACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
....AGCCGTCGGACTGGATCCCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCTGTG-----------------------------------------TT------------TAGGT.....................................1911.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGCTGTG-----------------------------------------TT------------TAGGT.....................................1811.0010000010

Generated: 05/16/2015 at 09:17 PM