ID:

dvi_11205

 Coordinate:

scaffold_12963:10123387-10123537 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.1 -26.0 -26.0

Flybase annnotation

exon [dvir_GLEANR_1905:10]; CDS [Dvir\Mhc-cds]; intron [Dvir\Mhc-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTTGATTGAAAAGGTTCGTTCAGCGCGGCTCCGTCGACGTCTCTCTCTCTACAGACTTGCCTGCCATTTTCATTAAGCACCTAAGTGTTTGTTATTTATATATAAATATAGTTTAAGCCCGTCGACTACTCTTTGGGAAAGCCATCTAGAACTGATGAACCCTTTAAAGAGCGTTACCCATTGCAGCTCTATTTGGAAGAAGTGCGCCCAAAAG
**************************************************((((((.(((...(((((((((((((............(((......)))..........(((((((....)))))))....((((((....))))))........))))))).........)))..)))........)))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 V053
head
 M061
embryo
 V047
embryo
 SRR060664
9_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060656
9x160_ovaries_total
 SRR060667
160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060679
140x9_testes_total
 SRR1106729
mixed whole adult body
 M047
female body
 SRR060665
9_females_carcasses_total
 SRR060681
Argx9_testes_total
 SRR1106730
embryo_16-30h
 V116
male body		 SRR060666
160_males_carcasses_total
 SRR060674
9x140_ovaries_total
 M027
male body		 SRR060659
Argentina_testes_total
 SRR1106727
larvae
.......TTTCGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 22 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GATTTCGGTATGGACTTGTTGGCCTGT........................................................................................................................................................................................................................... 27 0 1 4.00 4 0 0 2 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0
.....GATTTCGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......TTTCGGTATGGACTTGTT.................................................................................................................................................................................................................................. 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CATCGATTTCGGTATGGAC....................................................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTGTTGGCCTGTATTGATTTGA................................................................................................................................................................................................................. 22 0 1 2.00 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................CTTGTTGGCCTGTATTGATTT................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........GGTATGGACTTGTTGGCCT............................................................................................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTTGTTGGCCTGTATTGATTTGATT............................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........GGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 18 0 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................GATTTGATTGAAAAGGTTC..................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTGTTGGCCTGTATTGATTTGATTGAA............................................................................................................................................................................................................ 27 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TCGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATTTCGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 23 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGCGTTACCCGTAGCAGC........................... 18 2 8 1.38 11 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 1 0 0 0
.........TCGGTATGGACTTGTTGGCCTGTA.......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCGGTATGGACTTGTTGGCCT............................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........TTCGGTATGGACTTGTTGGCCTGTATT........................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........CGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................GACTTGGTGGCCTGTATTCATTTTAT................................................................................................................................................................................................................ 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................GCACCTAAGTGTTTGTTATT...................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CATCGATTTCGGTATGGACT...................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..ATCGATTTCGGTATGGACTTGT................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCGATTTCGGTATGGACT...................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........TCGGTATGGACTTGTTGGCCTGTC.......................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
TCATCGATTTCGGTATGGA........................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ACTTGTTGGCCTGTATTTATTTT.................................................................................................................................................................................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTT................................................................................................................................................................................................................... 39 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................CTTGTTGGCCTGTATTGATTTGATTGA............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCGATTTCGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATTTCGGTATGGACTTGTTG................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATTCCGGTATGGACTTGTTG................................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.CATCGATTTCGGTATGGA........................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTTGTTGGCCTGTATTGATT.................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTTGTTGGCCTGTATTGATTTG.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....GATTTCGGTATGGACTTGTT.................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................CTGTATTGATTTGATTGAAAAGC........................................................................................................................................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................TCCTGTATTGATTTGATTGAAAAGC........................................................................................................................................................................................................ 25 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...TCGATTTCGGTATGGACTTGTTGGCCT............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CGATTTCGGTATGGACTTGTT.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................TTGTTGGCCTGTATTGATTTGATT............................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GCCTGTATTGATTTGATTGAAA........................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CGATTTCGGTATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TGTTGGCCTGTATTGATTTGATTTA............................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CGATTTCGCTATGGACTTGTTGGCCT............................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................TGTTGGCCTTTATTGATTTGATTTA............................................................................................................................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GCCTGTATTGATTTGATTGA............................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................GCCTGTATTGATTTGATTGAAAA.......................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................TTGGCCTGTATTGATTTGATTGAAAAGC........................................................................................................................................................................................................ 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........TTCGGCATGGACTTGTTGGCC.............................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................TTGTTGGCCTGTATTGATTT................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......ATTTCGGTATGGACT...................................................................................................................................................................................................................................... 15 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................GTATTGATTTGATTGAAAA.......................................................................................................................................................................................................... 19 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..ATCGATTTCGGTATGGACTTGC................................................................................................................................................................................................................................... 22 1 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................TGTATTGATTTGATTGAAA........................................................................................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................ATTGATTTGATTGAAAAGC........................................................................................................................................................................................................ 19 1 5 0.40 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....CGATTTCGGTGTGGACTA..................................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
................................ATTGATTTGATTGAAAAGCCTA..................................................................................................................................................................................................... 22 3 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................CTTGTTTGCCTGTATTGAATTT.................................................................................................................................................................................................................. 22 3 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GACTACTCTTTGGGCGACC........................................................................ 19 3 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................AGTGATTTGATTGAAAAGC........................................................................................................................................................................................................ 19 2 16 0.06 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................GGCCGGTATCAATTTGATTG.............................................................................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................GTATTGAGTTGAGTGAAATG......................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..GACGATTTCGGTGTGGACT...................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...............TGGAGTTGTTGGCCT............................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

AGTAGCTAAAGCCATACCTGAACAACCGGACATAACTAAACTAACTTTTCCAAGCAAGTCGCGCCGAGGCAGCTGCAGAGAGAGAGATGTCTGAACGGACGGTAAAAGTAATTCGTGGATTCACAAACAATAAATATATATTTATATCAAATTCGGGCAGCTGATGAGAAACCCTTTCGGTAGATCTTGACTACTTGGGAAATTTCTCGCAATGGGTAACGTCGAGATAAACCTTCTTCACGCGGGTTTTC
**************************************************((((((.(((...(((((((((((((............(((......)))..........(((((((....)))))))....((((((....))))))........))))))).........)))..)))........)))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060682
9x140_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 M047
female body
 V116
male body		 SRR060685
9xArg_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 V053
head
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060689
160x9_testes_total
 SRR060678
9x140_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060683
160_testes_total
 SRR060680
 9xArg_testes_total
 SRR060667
160_females_carcasses_total
 SRR1106729
mixed whole adult body
 V047
embryo
 M027
male body		 M028
head
 SRR060670
9_testes_total
 SRR060666
160_males_carcasses_total
 SRR060657
140_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060673
9_ovaries_total
 SRR1106730
embryo_16-30h
..TAGCAAATGCCATACCTGA...................................................................................................................................................................................................................................... 19 2 1 141.00 141 48 40 9 12 7 3 3 2 3 5 0 2 3 1 2 0 0 1 0 0 0 0 0 0 0 0 0
AGTAGCAAATGCCATACCTG....................................................................................................................................................................................................................................... 20 2 1 59.00 59 24 14 4 5 6 0 1 3 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.GTAGCAAATGCCATACCTGA...................................................................................................................................................................................................................................... 20 2 1 51.00 51 16 10 7 6 5 1 1 0 1 2 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
AGTAGCAAATGCCGTACCTGA...................................................................................................................................................................................................................................... 21 3 1 39.00 39 12 7 12 3 0 2 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGCAAATGCCATACCTG....................................................................................................................................................................................................................................... 19 2 1 37.00 37 16 5 4 1 5 2 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
AGTAGCAAATGCCATACCTGA...................................................................................................................................................................................................................................... 21 2 1 36.00 36 10 9 7 1 7 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..TAGCAAATGCCATACCTG....................................................................................................................................................................................................................................... 18 2 2 29.00 58 30 13 4 3 2 0 1 2 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 0
AGTAGCAAATGCCGTACCTG....................................................................................................................................................................................................................................... 20 3 4 19.50 78 41 11 9 3 1 0 2 2 0 0 1 3 0 1 0 0 0 0 0 2 0 0 2 0 0 0 0
AGTAGCAAATGCCATACC......................................................................................................................................................................................................................................... 18 2 3 9.67 29 13 7 1 3 1 0 0 1 0 0 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.GTAGCAAATGCCGTACCTGA...................................................................................................................................................................................................................................... 20 3 5 4.40 22 6 2 4 3 0 0 0 0 1 2 0 2 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0
...AGCAAATGCCATACCTGA...................................................................................................................................................................................................................................... 18 2 3 4.00 12 4 4 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AGTAGCAAATGCCATACCT........................................................................................................................................................................................................................................ 19 2 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTCTCGCAATAGGTAACG.............................. 18 2 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCTCGCAATAGGTAACGC............................. 18 2 4 1.25 5 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
.......................................................................................TGTGTGAAAGGACGGTAATAGT.............................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGCAAATGCCATACCTGAT..................................................................................................................................................................................................................................... 21 3 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AGTACCAAATGCCATACCTG....................................................................................................................................................................................................................................... 20 3 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGCCAATGCCATACCTGA...................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TAGCTAATGCCATACCTGA...................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AGTAGCAAATGTCATACCTGA...................................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..TAGCAAATGCCATACCTGAT..................................................................................................................................................................................................................................... 20 3 4 0.75 3 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AGTAGCAAATGCCATACCTGAT..................................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
AGTTGCAAATGCCATACCTG....................................................................................................................................................................................................................................... 20 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGCAAATGCCATACCT........................................................................................................................................................................................................................................ 18 2 4 0.50 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGTAAATGCCATACCTGA...................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................TCGTGGATTCACTCACAATC....................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................AACTATTCCAAGCCATTCGC............................................................................................................................................................................................. 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TCTCGCAATAGGTAACGA............................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................TCGCGCGGCTGATTAGAAAC............................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..TAGCACATGCCATACCTGA...................................................................................................................................................................................................................................... 19 3 8 0.25 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGCAAATGCCATACCTGC...................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGCAAATGCGATACCTGA...................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGCAGCTGTAGATAGAGAGAA................................................................................................................................................................... 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
AGTAGCAAATGCCATACCGG....................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...AGCAAATGCCATACCTGAT..................................................................................................................................................................................................................................... 19 3 15 0.13 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AGTCTCGCAATAGGTAACG.............................. 19 3 15 0.13 2 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTCGCAAATGCCATACCTGA...................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.GTAGCAAACGCCATACCGGA...................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GGGTAACGTCGGGATATA.................... 18 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTCTCGCAATAGGTAACGC............................. 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..TAGCAAATGCCATACCTGT...................................................................................................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TCTGAACGGGAGGTTAAAG............................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:10123337-10123587 + dvi_11205 TCATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTTGATTGAAAAGGTTCGT-TC--------------------------------AG--------CGCG--GCTCCGTCGA-CGTCTCT---------------CTCTCT------------------------ACAGACT--------------------------------------------------------TGCCTGCCATTTTCATTAAGCACCTAAGTGT--TTGTTATTTATATATAA--ATA-TAGTT-------T-----AAGC-------CCGTCGACTA---CTCTTTGGGAAAGCCATCTAGAACTGATGAACCCTTTAAAGAGCGTT-----------------------------------------------ACCCATTGCAGCTC-TATTTGGAAGAAGTGCGCCCAAAAG
droMoj3 scaffold_6500:2803487-2803729 + dmo_1450 TCATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTTGATTGAAAAGGTTCGT-CGAACT-----------------------------------------C--GATCCGCACT-C---------------G-----------------------------------AAATACATATAT-C-----------------------------------------------------TTGCACTTTCCTTAAGCACTTAAGTGTTATTGTTGTT-----TTCCCCAAT-TACTTTAAGGATTATATTATATGAAGC--T------------CGTATCTGGTAATTCATCTAAAACTGATGAACCCAGGTAG---AAAG-----------------------TGTACTTATTGCAGCACTTTGTCTA--------------TATAT-GGA------------CGAG
droGri2 scaffold_15252:13257594-13257842 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTTGATTGAAAAGGTTCGT-TTCGAC-GT--------TTGCGATTTGC---------------------------GGTTC-C---ACTCGCTCGACAATTCGAC-----ATTTTGCTGTCA----------------------------------------------------------------------------------CATTTTCC-TATGCACTTAAGTGA--TTGTTAATTGTTTTTTATTATT-TAGTTTAAGCACT-----CGAC----T--C------------TTTGCCGGGCAATCCATCTAAAACTGATGAACCCGACTAG---AGTTTAC----ACTTAC-----------------------------------------------------C-AACTATATATATCTATATA
droWil2 scf2_1100000004577:1133039-1133232 + TCATTGATTTCGGTATGGACTTGTTGGCCTGTATCGATTTGATTGAAAAGGTTCGT-CGTC---GA--------GAGCAAC-----------------------------------------------------------------ATGAAGCTGTTACTTCTTCTATTT---------------------------------------------------------TATATATGCCTTTCGTTCTTA-----TACTTAATTGT---------------------------------------------------------------ATCACCTG---GTTAAATCATCTAGAACTGATGACCCCAGAT-------------------------------ATT---------------------TA-TTATTGTTGCAGTCATGC-GGAAGAG------------
dp5 4_group3:3004587-3004854 - TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATTTGATTGAAAAGGTTCGT-CTCCCC-CA--------TTCCATTCATC------AA--------AAAT--GTTCCGCCTA-CA--------------GCTCGTCTTGCT------------------------ATATA-TTGTATT--CTATTTATGATATCTAG----AGGTATAAGTTTTATTTTTAA----------------------------------------------------------AGAA---------TGCT-----CAATAGACC--C------------CCAAACTGGCAAATCATCTAGAACTGATGATCCCACGATGGTGGGTT--C---TA--------CTATACAT-------------------------ACATTTTTACAGTCATGC-GGAGAAGTGCGCCCACAAG
droPer2 scaffold_1:4491525-4491793 - TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATTTGATTGAAAAGGTTCGT-CTCCCC-CA--------TTCCATTCATC------AA--------AAAT--GTTCCGCCTA-CA--------------GCTCGTCTTGCT------------------------ATATA-TTGTATT-CCTATTTATGATATCTAG----AGGTATAAGTTTTATTTTTAA----------------------------------------------------------AGAA---------TGCT-----CAATAGACC--C------------CCAAACTGGCAAATCATCTAGAACTGATGATCCCACGATGGTGGGTT--C---TA--------CTATACAT-------------------------ACATTTTTACAGTCATGC-GGAGAAGTGCGCCCACAAG
droAna3 scaffold_12916:7335328-7335577 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGTTCTCC--------------------CTTCCAAGCAAG-GAATTCCAAAC--AATCCGCCCACCA--------------GCTCGTTGCTC-------------------------GTT------------------------TCTAG----ACACATAAGT-TTATAT----TATACAAGATCTT--TTTTTA-------------------------------------AG-----------AAAT-----CCAC----ACCC------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCAGGATG---GGTT-----------------------TA---------------------TA-TTATTATTACAGTTATGC-GGAGAAGTGCGCCCATAAG
droBip1 scf7180000396566:505042-505276 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGTTCTCC--------------------CTTCCAAACAAG-GAACTTCAAACCAAATCCGCCAC-CA--------------GCTCGTTGCTC-------------------------GTT------------------------TATAG----ACATATAAGATTTATTTATA--------------------------------------------------------------------------TA-----CGCC----C--C------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCAAGATG---GGTT--------------ATC----TATA---------------------CA-TTATTATTACAGTTATGC-AGAGAAGTGCGCCCATAAG
droKik1 scf7180000302472:41899-42166 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCGCTCATTCGCATCAATCAGCCTTCCAAGCCAAAGATTTTCAAAC--TATCCGCCAA-CA--------------GCTCTTTGCCCT------------------------ATCT-----------ATA-------------AATATATAAATAAGTTTTAATTATAA----------------------------------------------------------TG-----------CGTT-----CCAT----AGCC------------CCGAAATGGCAAATCATCTAGAACTGATGATCCCAGGAGG---GG-CGGC----AT-----A------TCTA---------------------TACTTATTTTTACAGTCACGC-GGAGAAGTGCGCCCATAAG
droFic1 scf7180000454078:702651-702906 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTTCTC-GC--------AACCAACCTTCCAAACCAA-------CAAAC--AATTCGCCAT-C---------------GCTCGTTGTTCT------------------------ATATGCATATAT-CTATA---------------TATATGATTAAGT-TTATTTATAA----------------------------------------------------------AG-----------TGTT-----TTGC----A--C------------CCTGGATGGCAAATCATCTAGAACTGATGACCCCTGAACG---GGT-TGC----AT-----A------CATG---------------------CATTTATTTTTACAGTCATGC-GGAGAAGTGCGCCCATAAG
droEle1 scf7180000490579:566798-567042 - TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GC--------AACCAACCTTCCAAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------ATCT-----------ACA---------------TTTACGAATAAGT-TTATTTATAG----------------------------------------------------------AG-----------TGTT-----CTGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGAACG---GG-TCGC----AT-----A------CATA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCTATAAG
droRho1 scf7180000780103:206492-206745 - TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GT--------AACCAACCCTCCAAGCCAA-------ACAAA--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------ATCT-----------ACA---------------TTTATGAATAAGT-TTATTTATAG----------------------------------------------------------TG-----------TGTT-----CTGC----A--C------------CCTAAATGGCAAATCATCTAAAACTGATGAACCCAGAACG---GG-TCGC----AT-----A------TACA----TA------T---TTATTTATATATTGTTACAGTCATGC-GGAGAAGTGCGCCCATAAG
droBia1 scf7180000301468:943618-943867 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GC--------AACCAAACCTCC------A--------AAAT--TATCCGCCCT-C---------------GCTCGTATTTCT------------------------ATCT-C---------ACA-------------TATGTATAAATATGT-TTATTTTTAA----------------------------------------------------------AG-----------TGTT-----TGGCGAA-T--C------------CCTCGATGGCAAATCATCTAAAACTGATGATCCCAGAGGG---GGCTAGCCTCTAT-----A------TATA---------------------TATTTATTGTTACAGTCATGC-GGAGAAGTGCGCCCATAAG
droTak1 scf7180000415914:522419-522665 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTTCTC-GC--------AACCAACCCTCC---------------AAAT--TATTCGCCTT-C---------------GCTCGTTTTACT------------------------ATCT-----------TCA-------------TACATATAAATAAGT-TTATCTATAA----------------------------------------------------------AG-----------TGTT-----TGGC----A--C------------CCTCAATGGTAAATCATCTAAAACTGATGATCCCAGAGAG---GCCCCGCCTCTAT-----ATA----TATA---------------------TATTTATTATTTCAGTCTTGC-GGAGAAGTGCGCCCATAAG
droEug1 scf7180000408961:348708-348952 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-TTCCTC-GT--------AACCAACTCTCC------A--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------ATCT-----------ACA-----------------------TAAGT-TTATATAA----T-------------------------------------ATATAAA-----------TG-----------TTTT-----TCGC----T--C------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCAGGAAG---GTTTTGC----ATATACCTTA----TACA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAG
dm3 chr2L:16775804-16776054 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATAA----------------------------------------------------------AG-----------TTTT-----CGGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGTTGG---GGGTAGC----GT-----ATA----TATA------------C---A---ATATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAG
droSim2 2l:16342475-16342722 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATCA----------------------------------------------------------AG-----------TTTT-----CGGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGATAG---GGGTGAC----AT-----ATA----TATA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAG
droSec2 scaffold_7:422537-422784 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCAGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATAA----------------------------------------------------------AG-----------TTTT-----CGGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGATAG---GGGTGGC----AT-----ATA----TATA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAG
droYak3 2R:4326036-4326279 - TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTTATTGAAAAGGTTCGT-CTCCTC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATAA----------------------------------------------------------AG-----------TTTT-----CAGC----A--C------------CCCGAATGGCAAATCATCTAAAACTGATGATCCCAGATGG---GGGTAGC----AT-----A--------TA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAG
droEre2 scaffold_4845:19846439-19846690 + TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCAC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------GCA---------------TATATGAATAAGT-TAATTTATAA----------------------------------------------------------TG--TGCCG-------A-----AAGC----A--C------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCACATGG---GGCTAGC----ATATAC-T------CGTA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTTGATTGAAAAGGTTCGT-TC--------------------------------AG--------CGCG--GCTCCGTCGA-CGTCTCT---------------CTCTCT------------------------ACAGACT--------------------------------------------------------TGCCTGCCATTTTCATTAAGCACCTAAGTGT--TTGTTATTTATATATAA--ATA-TAGTT-------T-----AAGC-------CCGTCGACTA---CTCTTTGGGAAAGCCATCTAGAACTGATGAACCCTTTAAAGAGCGTT-----------------------------------------------ACCCATTGCAGCTC-TATTTGGAAGAAGTGCGCCCAAAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......TTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004040000000000000000000000000000000000000000000000000000000000000
.....GATTTCGGTATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004001200000000000000000000000000010000000000000000000000000000000
.....GATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003030000000000000000000000000000000000000000000000000000000000000
........TTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003030000000000000000000000000000000000000000000000000000000000000
.......TTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002010000000000000000000000000000000000000000000000000000000000100
.CATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000000100000000000000000000000000000000000000001000
....................TTGTTGGCCTGTATTGATTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000001000000000001000000000000000000000000000000000
...................CTTGTTGGCCTGTATTGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000001000000000000000000000000000000000000000000001000
...........GGTATGGACTTGTTGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002020000000000000000000000000000000000000000000000000000000000000
...................CTTGTTGGCCTGTATTGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000001100000000000000000000000000000000000000000000000
...........GGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002010000000000000000000000000001000000000000000000000000000000000
...................................GATTTGATTGAAAAGGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000200000000000000000000000000000000000000000000000000000000
....................TTGTTGGCCTGTATTGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002010000000000001000000000000000000000000000000000000000000000000
.........TCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000000000000000000000000000000000000000000000000000000000000
......ATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002010000000000000000000000000000000000000000000000000000000000100
.........TCGGTATGGACTTGTTGGCCTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
........TTCGGTATGGACTTGTTGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
........TTCGGTATGGACTTGTTGGCCTGTATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
..........CGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GCACCTAAGTGT--TTGTTATT...............................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.CATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
..ATCGATTTCGGTATGGACTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...TCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
.........TCGGTATGGACTTGTTGGCCTGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
TCATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.CATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................3911.001000000000000000000000000000000000000000000000000000000000010000
...................CTTGTTGGCCTGTATTGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
...TCGATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
......ATTTCGGTATGGACTTGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
...................CTTGTTGGCCTGTATTGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...................CTTGTTGGCCTGTATTGATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
.....GATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
............................CTGTATTGATTTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...TCGATTTCGGTATGGACTTGTTGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
....CGATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
....................TTGTTGGCCTGTATTGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
..........................GCCTGTATTGATTTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
....CGATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
..........................GCCTGTATTGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
..........................GCCTGTATTGATTTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000100000
.......................TTGGCCTGTATTGATTTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
....................TTGTTGGCCTGTATTGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
......ATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.501000000000000000000000000000000000000000000000000000000000100000
..............................GTATTGATTTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000001000000000000000000000000000000000000000000000000
..ATCGATTTCGGTATGGACTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000100000000000000000000000000000000000000000000000000000000000
.............................TGTATTGATTTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000000000000000000000000000000000000000000000000000100
................................ATTGATTTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................1950.402000200000000000000000000000000000000000000000000000000000000000
droMoj3
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTTGATTGAAAAGGTTCGT-CGAACT-----------------------------------------C--GATCCGCACT-C---------------G-----------------------------------AAATACATATAT-C-----------------------------------------------------TTGCACTTTCCTTAAGCACTTAAGTGTTATTGTTGTT-----TTCCCCAAT-TACTTTAAGGATTATATTATATGAAGC--T------------CGTATCTGGTAATTCATCTAAAACTGATGAACCCAGGTAG---AAAG-----------------------TGTACTTATTGCAGCACTTTGTCTA--------------TATAT-GGA------------CGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................GGCCTGTATTGATTTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
TCATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.........................GGCCTGTATTGATTTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..............................................................................................................................................................................................................................................................ACTTAAGTGTTATTGTTGTT-----TTCC......................................................................................................................................................................................2411.001100000
.....GATTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
......ATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
.........................GGCCTGTATTGATTTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................GGACTTGTTGGCCTGTATTGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................GGCCTGTATTGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....GATTTCGGTATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....GATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
....................TTGTTGGCCTGTATTGATTTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......TTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
..............................GTATTGATTTGATTGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2020.501100000
...............................TATTGATTTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2020.501100000
...........................................................................................................................................................................................................................................................................................................ATTATATTATATGAAGC--C------------A.....................................................................................................................................19140.294300100
droGri2
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATTGATTTGATTGAAAAGGTTCGT-TTCGAC-GT--------TTGCGATTTGC---------------------------GGTTC-C---ACTCGCTCGACAATTCGAC-----ATTTTGCTGTCA----------------------------------------------------------------------------------CATTTTCC-TATGCACTTAAGTGA--TTGTTAATTGTTTTTTATTATT-TAGTTTAAGCACT-----CGAC----T--C------------TTTGCCGGGCAATCCATCTAAAACTGATGAACCCGACTAG---AGTTTAC----ACTTAC-----------------------------------------------------C-AACTATATATATCTATATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..ATCGATTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
.....GATTTCGGTATGGACTTGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
droWil2
TCATTGATTTCGGTATGGACTTGTTGGCCTGTATCGATTTGATTGAAAAGGTTCGT-CGTC---GA--------GAGCAAC-----------------------------------------------------------------ATGAAGCTGTTACTTCTTCTATTT---------------------------------------------------------TATATATGCCTTTCGTTCTTA-----TACTTAATTGT---------------------------------------------------------------ATCACCTG---GTTAAATCATCTAGAACTGATGACCCCAGAT-------------------------------ATT---------------------TA-TTATTGTTGCAGTCATGC-GGAAGAG------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................CTTGTTGGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................25110.001070030
.CATTGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.00630030
....................TTGTTGGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2425.5011100001
...................CTTGTTGGCCTGTATCGATTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2315.00520030
....................TTGTTGGCCTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2724.50980100
..........................GCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2023.50740102
.........................GGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2123.50760100
.................GACTTGTTGGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00330000
.CATTGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1822.50530020
...................CTTGTTGGCCTGTATCGATTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00210010
...................CTTGTTGGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00210010
.........................GGCCTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2222.00430001
............GTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00211000
..ATTGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
...TTGATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00220000
....TGATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000
........TTCGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00210010
.................GACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000
...................CTTGTTGGCCTGTATCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
....................TTGTTGGCCTGTATCGATTTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2321.50330000
.....................TGTTGGCCTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2621.50330000
.........................GGCCTGTATCGATTTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................1821.50320001
....................TTGTTGGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2621.50320010
.........................GGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00210001
...........GGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.......TTTCGGTATGGACTTGTTGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
..................ACTTGTTGGCCTGTATCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
...................CTTGTTGGCCTGTATCGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
....................TTGTTGGCCTGTATCGATTTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00210010
...................CTTGTTGGCCTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
.......TTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
..ATTGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..........CGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
TCATTGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
....................TTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1821.00220000
TCATTGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........................TGGCCTGTATCGATTTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2821.00220000
..........................GCCTGTATCGATTTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2621.00220000
...................CTTGTTGGCCTGTATCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........................TGGCCTGTATCGATTTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00210001
....................TTGTTGGCCTGTATCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00220000
..................ACTTGTTGGCCTGTATCGATTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.........................GGCCTGTATCGATTTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2321.00200002
..........................GCCTGTATCGATTTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2221.00220000
........TTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........TTCGGTATGGACTTGTTGGCCTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
.......................TTGGCCTGTATCGATTTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2821.00220000
.........................GGCCTGTATCGATTTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110000
....................TTGTTGGCCTGTATCGATTTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50110000
........................TGGCCTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100001
...........................CCTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100010
TCATTGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010
.......................TTGGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50110000
....................TTGTTGGCCTGTATCGATTTGATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50110000
............................CTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110000
.............................TGTATCGATTTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000
....................TTGTTGGCCTGTATCGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110000
....................TTGTTGGCCTGTATCGATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110000
.......................TTGGCCTGTATCGATTTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50110000
.CATTGATTTCGGTATGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.33110000
dp5
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATTTGATTGAAAAGGTTCGT-CTCCCC-CA--------TTCCATTCATC------AA--------AAAT--GTTCCGCCTA-CA--------------GCTCGTCTTGCT------------------------ATATA-TTGTATT--CTATTTATGATATCTAG----AGGTATAAGTTTTATTTTTAA----------------------------------------------------------AGAA---------TGCT-----CAATAGACC--C------------CCAAACTGGCAAATCATCTAGAACTGATGATCCCACGATGGTGGGTT--C---TA--------CTATACAT-------------------------ACATTTTTACAGTCATGC-GGAGAAGTGCGCCCACAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........TTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000002
.....GATTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000002
...............TGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
..........................GCCTGTATCGATTTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
....................TTGTTGGCCTGTATCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................GACTTGTTGGCCTGTATCGATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
...........GGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000001
...................CTTGTTGGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........CGGTATGGACTTGTTGGCCTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....GATTTCGGTATGGACTTGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....CGATTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
..........CGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..ATCGATTTCGGTATGGACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020200000000
..ATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
...TCGATTTCGGTATGGACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
...TCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010100000000
droPer2
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATTTGATTGAAAAGGTTCGT-CTCCCC-CA--------TTCCATTCATC------AA--------AAAT--GTTCCGCCTA-CA--------------GCTCGTCTTGCT------------------------ATATA-TTGTATT-CCTATTTATGATATCTAG----AGGTATAAGTTTTATTTTTAA----------------------------------------------------------AGAA---------TGCT-----CAATAGACC--C------------CCAAACTGGCAAATCATCTAGAACTGATGATCCCACGATGGTGGGTT--C---TA--------CTATACAT-------------------------ACATTTTTACAGTCATGC-GGAGAAGTGCGCCCACAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................CTTGTTGGCCTGTATCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................20112.00121200000
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1819.009801000
...................CTTGTTGGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2719.009900000
...................CTTGTTGGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2517.007610000
.....GATTTCGGTATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004200002
...................CTTGTTGGCCTGTATCGATTTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
....................TTGTTGGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
.................GACTTGTTGGCCTGTATCGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.......................TTGGCCTGTATCGATTTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.....GATTTCGGTATGGACTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1822.004000004
....................TTGTTGGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
......................GTTGGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
...TCGATTTCGGTATGGACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.503000003
....................TTGTTGGCCTGTATCGATTTGATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..ATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.002000002
.....GATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................GACTTGTTGGCCTGTATCGATTTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.....GATTTCGGTATGGACTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................CTTGTTGGCCTGTATCGATTTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.CATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
...........................CCTGTATCGATTTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....GATTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................CTTGTTGGCCTGTATCGATTTGATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................CTTGTTGGCCTGTATCGATTTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................ACTTGTTGGCCTGTATCGATTTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
..................ACTTGTTGGCCTGTATCGATTTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................CTTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................CTTGTTGGCCTGTATCGATTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....GATTTCGGTATGGACTTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501100000
..ATCGATTTCGGTATGGACTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000001
droAna3
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGTTCTCC--------------------CTTCCAAGCAAG-GAATTCCAAAC--AATCCGCCCACCA--------------GCTCGTTGCTC-------------------------GTT------------------------TCTAG----ACACATAAGT-TTATAT----TATACAAGATCTT--TTTTTA-------------------------------------AG-----------AAAT-----CCAC----ACCC------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCAGGATG---GGTT-----------------------TA---------------------TA-TTATTATTACAGTTATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................GGCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................22218.50371000036
.........................GGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................19213.50270010026
.........................GGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................21211.50230010121
..........................GCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2129.50191000018
.........................GGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................1828.50172010014
...................CTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2118.008053000
.........................GGCCTGTATCGATCTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2327.00141000013
..........................GCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2025.00100000010
.........................GGCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2024.008000008
..........................GCCTGTATCGATCTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2223.507100006
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003012000
...................CTTGTTGGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003012000
....................TTGTTGGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003003000
.........................GGCCTGTATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2622.004000004
..............ATGGACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
.CATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002011000
..................ACTTGTTGGCCTGTATCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002020000
..........................GCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................1922.004000004
....................TTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002011000
..............ATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002020000
..........................GCCTGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2321.503000003
.............................TGTATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2221.503000021
.........................GGCCTGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2421.002000002
...................CTTGTTGGCCTGTATCGATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..................ACTTGTTGGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
....................TTGTTGGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................TTGTTGGCCTGTATCGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................TGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2021.002000020
......ATTTCGGTATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...................CTTGTTGGCCTGTATCGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..........................GCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1821.002000002
...................CTTGTTGGCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
.......TTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................TTGTTGGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...................CTTGTTGGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...................CTTGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
................GGACTTGTTGGCCTGTATCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............................................................................................................CGCCCACCA--------------GCTCGTTGCTC-------------------------GTT------------------------............................................................................................................................................................................................................................................................................2311.001100000
...................CTTGTTGGCCTGTATCGATCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....CGATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
........................TGGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000001
.........................GGCCTGTATCGATCTGATTGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000001
..........................GCCTGTATCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2620.501000001
..ATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501100000
........................TGGCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
.........................GGCCTGTATCGATCTGATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
.........................GGCCTGTATCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000001
...TCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
.........................GGCCTGTATCGATCTGATTA....................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000010
..............................GTATCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000010
..........................GCCTGTATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000001
.................................TCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................19110.091000010
droBip1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGTTCTCC--------------------CTTCCAAACAAG-GAACTTCAAACCAAATCCGCCAC-CA--------------GCTCGTTGCTC-------------------------GTT------------------------TATAG----ACATATAAGATTTATTTATA--------------------------------------------------------------------------TA-----CGCC----C--C------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCAAGATG---GGTT--------------ATC----TATA---------------------CA-TTATTATTACAGTTATGC-AGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotal
No Reads
droKik1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCGCTCATTCGCATCAATCAGCCTTCCAAGCCAAAGATTTTCAAAC--TATCCGCCAA-CA--------------GCTCTTTGCCCT------------------------ATCT-----------ATA-------------AATATATAAATAAGTTTTAATTATAA----------------------------------------------------------TG-----------CGTT-----CCAT----AGCC------------CCGAAATGGCAAATCATCTAGAACTGATGATCCCAGGAGG---GG-CGGC----AT-----A------TCTA---------------------TACTTATTTTTACAGTCACGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotal
No Reads
droFic1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTTCTC-GC--------AACCAACCTTCCAAACCAA-------CAAAC--AATTCGCCAT-C---------------GCTCGTTGTTCT------------------------ATATGCATATAT-CTATA---------------TATATGATTAAGT-TTATTTATAA----------------------------------------------------------AG-----------TGTT-----TTGC----A--C------------CCTGGATGGCAAATCATCTAGAACTGATGACCCCTGAACG---GGT-TGC----AT-----A------CATG---------------------CATTTATTTTTACAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotal
No Reads
droEle1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GC--------AACCAACCTTCCAAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------ATCT-----------ACA---------------TTTACGAATAAGT-TTATTTATAG----------------------------------------------------------AG-----------TGTT-----CTGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGAACG---GG-TCGC----AT-----A------CATA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCTATAAGSizeHit CountTotal NormTotal
No Reads
droRho1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GT--------AACCAACCCTCCAAGCCAA-------ACAAA--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------ATCT-----------ACA---------------TTTATGAATAAGT-TTATTTATAG----------------------------------------------------------TG-----------TGTT-----CTGC----A--C------------CCTAAATGGCAAATCATCTAAAACTGATGAACCCAGAACG---GG-TCGC----AT-----A------TACA----TA------T---TTATTTATATATTGTTACAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotal
No Reads
droBia1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GC--------AACCAAACCTCC------A--------AAAT--TATCCGCCCT-C---------------GCTCGTATTTCT------------------------ATCT-C---------ACA-------------TATGTATAAATATGT-TTATTTTTAA----------------------------------------------------------AG-----------TGTT-----TGGCGAA-T--C------------CCTCGATGGCAAATCATCTAAAACTGATGATCCCAGAGGG---GGCTAGCCTCTAT-----A------TATA---------------------TATTTATTGTTACAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotal
No Reads
droTak1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTTCTC-GC--------AACCAACCCTCC---------------AAAT--TATTCGCCTT-C---------------GCTCGTTTTACT------------------------ATCT-----------TCA-------------TACATATAAATAAGT-TTATCTATAA----------------------------------------------------------AG-----------TGTT-----TGGC----A--C------------CCTCAATGGTAAATCATCTAAAACTGATGATCCCAGAGAG---GCCCCGCCTCTAT-----ATA----TATA---------------------TATTTATTATTTCAGTCTTGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotal
No Reads
droEug1
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-TTCCTC-GT--------AACCAACTCTCC------A--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------ATCT-----------ACA-----------------------TAAGT-TTATATAA----T-------------------------------------ATATAAA-----------TG-----------TTTT-----TCGC----T--C------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCAGGAAG---GTTTTGC----ATATACCTTA----TACA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotal
No Reads
dm3
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATAA----------------------------------------------------------AG-----------TTTT-----CGGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGTTGG---GGGTAGC----GT-----ATA----TATA------------C---A---ATATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................GGCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2226.50130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000200000000000500000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2125.00100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000030000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......TTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000011000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2323.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................GCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2023.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................1823.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................GCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2123.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000
...................CTTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATCGATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1922.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTGTTGGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ACTTGTTGGCCTGTATCGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATCGATTTCGGTATGGACTTGTTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................TGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGATTTCGGTATGGACTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-GGAGAAGTGCGCCCATA..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...TCGATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGACTTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTTGTTGGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGTATGGACTTGTTGGCCTGTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................GCCTGTATCGATCTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....CGATTTCGGTATGGACTTGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCATCGATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTCGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCCTGTATCGATCTGATTGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000
................GGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGGTTCGT-CTCCTC-CC--------AACCAAC................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GATTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GACTTGTTGGCCTGTATCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................TTGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTCGGTATGGACTTGTTGGCCATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATCCCAGTTGG---GGGTAGC----GT-----.........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTATCGATCTGATTGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
........TTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.CATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............GTATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................TGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATTGTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGATTTCGGTATGGACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCCTGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTATCGATCTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................GCCTGTATCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..ATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................GTATCGATCTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................GGCCTGTATCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCCTGTATCGATCTGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGTATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................CTGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droSim2
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-GC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATCA----------------------------------------------------------AG-----------TTTT-----CGGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGATAG---GGGTGAC----AT-----ATA----TATA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................18112.0012001200000000000000
....................TTGTTGGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................23111.001100900000000200000
...................CTTGTTGGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2518.00800800000000000000
...................CTTGTTGGCCTGTATCGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2017.00700600000000100000
...................CTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2116.00601500000000000000
....................TTGTTGGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2616.00600600000000000000
....................TTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2015.00500500000000000000
....................TTGTTGGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300300000000000000
.CATCGATTTCGGTATGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300300000000000000
.CATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00300200000000100000
....................TTGTTGGCCTGTATCGATCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300000000000000
..............ATGGACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300300000000000000
.....GATTTCGGTATGGACTTGTTGGCCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
...................CTTGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000000000200000
....................TTGTTGGCCTGTATCGATCTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
..................ACTTGTTGGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200200000000000000
.....GATTTCGGTATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00201100000000000000
...................CTTGTTGGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
.CATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
....................TTGTTGGCCTGTATCGATCTGATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200200000000000000
..........................GCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2022.00400400000000000000
..........CGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
........TTCGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
...................CTTGTTGGCCTGTATCGATCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
............GTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
.............TATGGACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
..................ACTTGTTGGCCTGTATCGATCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00210100000000000000
.........TCGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201100000000000000
....................TTGTTGGCCTGTATCGATCTGATTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
...................CTTGTTGGCCTGTATCGATCTGATTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
......................GTTGGCCTGTATCGATCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...................CTTGTTGGCCTGTATCGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..................ACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..................ACTTGTTGGCCTGTATCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
..ATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.00201100000000000000
....................TTGTTGGCCTGTATCGATCTGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..........................GCCTGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2321.00200200000000000000
........................TGGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2221.00200200000000000000
.......TTTCGGTATGGACTTGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
...................CTTGTTGGCCTGTATCGATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.......................TTGGCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.......................TTGGCCTGTATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
................................ATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................1921.00200200000000000000
....................TTGTTGGCCTGTATCGATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..........................GCCTGTATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2721.00200200000000000000
.................GACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................GTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...TCGATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
......................GTTGGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...................................................................................................................AT-C---------------GCTCGTTGTTCT------------------------GTCA-----------AC......................................................................................................................................................................................................................................................................................2111.00100100000000000000
..................ACTTGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
....................TTGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...................CTTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
....CGATTTCGGTATGGACTTGTTGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
..................................CGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................1870.57400400000000000000
....CGATTTCGGTATGGACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100100000000000000
............................CTGTATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100100000000000000
............................CTGTATCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100100000000000000
.........................GGCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000000000100000
..............................GTATCGATCTGATTGAAAAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100100000000000000
...TCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100100000000000000
...............................TATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2240.25100100000000000000
.................................TCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................20150.13200200000000000000
droSec2
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCTC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCAGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATAA----------------------------------------------------------AG-----------TTTT-----CGGC----A--C------------CCTGAATGGCAAATCATCTAAAACTGATGATCCCAGATAG---GGGTGGC----AT-----ATA----TATA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030030
..........................GCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0021100
...................CTTGTTGGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
...................CTTGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................TTGTTGGCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
...TCGATTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
.........TCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
..........................GCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020101
.........................GGCCTGTATCGATCTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010001
.............................TGTATCGATCTGATTGAAAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010001
..........................GCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100
................................ATCGATCTGATTGAAAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................1920.5011000
.........................GGCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5011000
..ATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
..................................CGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
droYak3
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTTATTGAAAAGGTTCGT-CTCCTC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------ACA---------------TATATGAATAAGT-TTATTTATAA----------------------------------------------------------AG-----------TTTT-----CAGC----A--C------------CCCGAATGGCAAATCATCTAAAACTGATGATCCCAGATGG---GGGTAGC----AT-----A--------TA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................CTTGTTGGCCTGTATCGATCTTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00211000000000
....................TTGTTGGCCTGTATCGATCTTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100000000
...................CTTGTTGGCCTGTATCGATCTTATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00210100000000
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200011000000
....................TTGTTGGCCTGTATCGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000
.CATCGATTTCGGTATGGACTTGTTGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00210100000000
.........................................................CTCCTC-CC--------AACCAACCTTCCT..........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
..............ATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.CATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.........................GGCCTGTATCGATCTTATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
....................TTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.................GACTTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCATGC-GGAGAAGTGCGCCCATA..2511.00101000000000
.CATCGATTTCGGTATGGACTTGTTGGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
............................CTGTATCGATCTTATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
......ATTTCGGTATGGACTTGTTGGCCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000
.........TCGGTATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000
...................CTTGTTGGCCTGTATCGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.................GACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
....................TTGTTGGCCTGTATCGATCTTATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000
...TCGATTTCGGTATGGACTTGTTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.CATCGATTTCGGTATGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
...................CTTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
...................CTTGTTGGCCTGTATCGATCTTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...TCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100100000000
droEre2
TCATCGATTTCGGTATGGACTTGTTGGCCTGTATCGATCTGATTGAAAAGGTTCGT-CTCCAC-CC--------AACCAACCTTCCTAGCCAA--------AAAT--TATCCGCCAT-C---------------GCTCGTTGTTCT------------------------GTCA-----------GCA---------------TATATGAATAAGT-TAATTTATAA----------------------------------------------------------TG--TGCCG-------A-----AAGC----A--C------------CCTGAATGGCAAATCATCTAGAACTGATGATCCCACATGG---GGCTAGC----ATATAC-T------CGTA---------------------TATTTATTGTTTCAGTCATGC-GGAGAAGTGCGCCCATAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.CATCGATTTCGGTATGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0041002010
.CATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030001020
...................CTTGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030002100
...................CTTGTTGGCCTGTATCGATCTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020101000
.................GACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0021000010
....................TTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000020
.......TTTCGGTATGGACTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020100010
.........................GGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2121.5030001110
.CATCGATTTCGGTATGGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...................CTTGTTGGCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000
.........................GGCCTGTATCGATCTGATTGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000110
...................CTTGTTGGCCTGTATCGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
..................ACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
...................CTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGC-GGAGAAGTGCGCCCATA..2411.0010000100
...................CTTGTTGGCCTGTATCGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.........................GGCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2221.0021000100
.................GACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
.....................TGTTGGCCTGTATCGATCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
................GGACTTGTTGGCCTGTATCGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
..............ATGGACTTGTTGGCCTGTATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..ATCGATTTCGGTATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010
............................CTGTATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010001000
..........................GCCTGTATCGATCTGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000100
..........................GCCTGTATCGATCTGATTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000100
.............................TGTATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000100
........................TGGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010001000
.........................GGCCTGTATCGATCTGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010001000
..........................GCCTGTATCGATCTGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100
................................ATCGATCTGATTGAAAAGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410001000

Generated: 05/16/2015 at 09:13 PM