ID:

dvi_11129

 Coordinate:

scaffold_12963:9682019-9682169 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.2 -5.0 -4.7

Flybase annnotation

CDS [Dvir\GJ17286-cds]; exon [dvir_GLEANR_1888:7]; intron [Dvir\GJ17286-in]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCACACGCATGCACGAACACAACAACATGCCACAAAAACAACAACAACGACAACAACAACAACAACAATAATGACTCGTCACTAACCCAATAAAATACATTGCGCCGTGCTGCCGCTTGCCACGTTTGCCTGCCATTTTACCTGCCAACTTGCAACTGCCACCTGTCACCGACAACAACAACAACAATAACTTACAATCAGCTGGAGCCGAAGCCTGCCACCGCCTTTGGGCAGCAGCTCGAGTGCAATAG
***************************************************************......................................(((.(((((........)).)))..)))...*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M028
head
 M027
male body		 M047
female body
 V053
head
 V116
male body		 SRR060678
9x140_testes_total
 SRR060681
Argx9_testes_total
 SRR060655
9x160_testes_total
 SRR060679
140x9_testes_total
 SRR060680
 9xArg_testes_total
 SRR060689
160x9_testes_total
 V047
embryo
 M061
embryo
 SRR060666
160_males_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
..............................................................................................................................................................................................CTTACAAACAGCTGGAGCC.......................................... 19 1 1 49.00 49 20 10 7 8 3 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGAGC........................................... 18 1 2 26.00 52 35 15 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGAGCCT......................................... 20 2 1 25.00 25 7 5 2 2 9 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAAACAGCTGGAGCC.......................................... 18 1 2 18.50 37 24 12 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAAACAGCTGGAGCCT......................................... 19 2 3 7.00 21 4 3 4 9 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GCTTACAAACAGCTGGAGCCT......................................... 21 3 3 5.33 16 0 0 14 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GCTTACAAACAGCTGGAGCC.......................................... 20 2 3 5.33 16 1 1 13 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGAGCCC......................................... 20 2 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGAGCCTC........................................ 21 3 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAATCCGTTGGAGCC.......................................... 19 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTTGGGCAGCAGCTCGAGTGC..... 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TACAATCAGCTGGAGCCGAAG...................................... 21 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0
.............................................AACGACAACAACAACAACAACA........................................................................................................................................................................................ 22 0 20 1.55 31 0 0 31 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGCTTACAAACAGCTGGAGCC.......................................... 21 3 7 1.43 10 1 1 7 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAAACCGCTGGAGCC.......................................... 18 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGGGCAGCGGCTCGAGTGC..... 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................GCCGCTTGCCACGTTTGCCTG....................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAATGCATTGCGCCGTGCTGC.......................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................AACAATAATGACTCGTCACTA....................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................ACAATCAGCTGGAGCCGAGGC..................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TTGCGCCGTGCTGCCGCTTG.................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GCCGAAGCCTGCCACCGCCTT........................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................TGCGCCGTGCTGCCGCTTGC................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TTGCCTGCCAACTTGCAACT.............................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GGCTGGAGCCGAAGCCTGCCA............................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACATCTGGAGCC.......................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................TAATGACTCGTCACTAACCCA.................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AATCAGCTGGAGCCGAAGCCG................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................CCGTGCTGCCGCTTGCCACGT.............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................CTGGAGCCGAAGCCTGCCACC............................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ACAATCAGCTGGAGCCGAAGC..................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......CATGCACGAACACAGCAACGT............................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CAACAATAATGACTCGTCACT........................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................CCGCTTGCCACGTTTGCCTGC...................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAAACAGCTGGAGCCTC........................................ 20 3 10 0.80 8 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................ACGACAACAACAACAACAACAAT...................................................................................................................................................................................... 23 0 13 0.69 9 0 4 4 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................TACAAACAGCTGGAGCCT......................................... 18 2 13 0.62 8 7 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................CGACAACAACAACAACAACAAT...................................................................................................................................................................................... 22 0 20 0.60 12 1 0 9 0 2 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGCGCC.......................................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAACCAGCTGGAGCCT......................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGAGAC.......................................... 19 2 5 0.40 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................GCCGTGCTGACGTTTGCCACGTC............................................................................................................................. 23 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................TTACAAACAGCTGGAGCCC......................................... 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACACCTGGAGC........................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGATCCT......................................... 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAAATAGCTGGAGCC.......................................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................GACAACAACAACAACAACAAT...................................................................................................................................................................................... 21 0 20 0.15 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTGGCACGGCCTTTGGGC................... 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................CTTACAAACAGCTGGAAC........................................... 18 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................ATGCCCCAAAAACAACAACAGC........................................................................................................................................................................................................... 22 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAAACCGCTGGAGCCT......................................... 19 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTACAAACAGCGGGAGCCT......................................... 19 3 15 0.07 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CGCTGAAGCCTGCCACCGA........................... 19 3 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CGACAACAACAACAACAAT............................................................... 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AACGACAACAACAACAACAACACT...................................................................................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AACGACAACAACAACAACAA.......................................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................TCACAAACAGCTGGAGCCT......................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................CAACAACAACAACAATAATG.................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................CAACAACAACGACAACAAC.................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CGTGTGCGTACGTGCTTGTGTTGTTGTACGGTGTTTTTGTTGTTGTTGCTGTTGTTGTTGTTGTTGTTATTACTGAGCAGTGATTGGGTTATTTTATGTAACGCGGCACGACGGCGAACGGTGCAAACGGACGGTAAAATGGACGGTTGAACGTTGACGGTGGACAGTGGCTGTTGTTGTTGTTGTTATTGAATGTTAGTCGACCTCGGCTTCGGACGGTGGCGGAAACCCGTCGTCGAGCTCACGTTATC
***********************************************************************************************************************......................................(((.(((((........)).)))..)))...*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V116
male body		 M047
female body
 SRR060679
140x9_testes_total
 SRR060655
9x160_testes_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 V053
head
 SRR060660
Argentina_ovaries_total
 M028
head
 SRR060657
140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060682
9x140_0-2h_embryos_total
............................................................................................................GGACGGCGAACGGTGCAAACGGG........................................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTCGGCTTCGGACGGTGGCG........................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................GTTGTTGTTATTACTGAGCAG........................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..TGTGCGTACGTGCTTGTGTTG.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTACTGAGCAGTGATTGGGTT................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GGCGGAAACCCGTCGTCGAGC.......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CCCGTCGTCGAGCTCACGTT... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......................................................TGTTGTTGTTGTTATTACTGA............................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGGTTGGACGTTGACGGTGGG....................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................GGCACGACGGCGAACGGTGCA.............................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGTTGACGGGGGACAGTGGCT............................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................TTACTGAGCAGTGATTGGGT.................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................GCAGTGATTGGGTTATTTTAT.......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CCCGTCGTCGAGCTCACGTTA.. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGCGGAGACCCGTCGTCGAGCT......... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................GTCATTGGGTTCTTTTATG......................................................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................AAATGGAGGGTTGAACCT................................................................................................. 18 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
...........................ACGGTGTTTTTGTTGTTGTT............................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................TTGTAGTTATTACTGGGC............................................................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................GCTGTTGTAGTTATTACTGGGC............................................................................................................................................................................. 22 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................GTTGTCGTTACTACTGAGC............................................................................................................................................................................. 19 2 8 0.13 1 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................GTGGTGGGGTTATTTTAT.......................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................TGTTGTAGTTGTTACTGAGC............................................................................................................................................................................. 20 2 14 0.07 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................TTGTTGTTGTTGTTATTAC.................................................................................................................................................................................. 19 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................TCATTGGGTTCTTTTATGG........................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................TTGCTGTTATTGAATGTA...................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1
............................................................TTGTAGTTGTTACTGAGC............................................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................GTTGTAGTTGTTACTGAGC............................................................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:9681969-9682219 + dvi_11129 GCACA-----------CGCATGCACGAACACAACAACATGC---------------CACAAAAACAAC---------AACA---------ACGA------------------CAACAACAA---------------CAACAA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGACTCGTCACTAACCCAATAAAATACAT------------------------------TGCGCCGTGC------------------------------TGCCGCTTGCCACGTTTGC----CTGCCATTTTACCTG------------------------CCAACTTG-------------------------------------------------------------CAACTGCCACCTGTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGACAACAAC------------------------AACAACAAT-----------------------------AACTTACAATC------AGCTGGAGCCGAAGCCT-------GCCA---------------CC-------------------------GCCTTTGGGCAGCA---GCTCGAGTGCA---ATAG------
droMoj3 scaffold_6500:1575838-1576042 - GCACA-----------C--A--------TACAACAA-------------------CAACAACAATAAT---------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGCTCACTAACCA---------AATAACAACTACAACAACAACAACAACAACTGTCGCTCCGCCT------------------------------TGTCGCTTT----GCTTTG----CTGC--TGTCACCTG------------------------CCAACCTGCCA---------------------------------------CC---------------------TGGCATGTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCCC-----------------------AGCTGGAGCCAAAGCCC-------GCCA---------------CC-------------------------GCCTTTGGGCAGCA---GCTCGAGTGCA---ACAGCAGCAC
droGri2 scaffold_3311:183-379 + ACA-----------------------------ACAA-------------------CAATAATAACAAC---------AATA---------ACAA------------------CAACAATAA---------------CAA---------------CAATAT---ATCCG---CAATC-----------AATAATAATCATAGCAACTATAGCAAG-----------------------------------------------C-TTCTGGCCAGCAGCAATATGAATACGACAGCGATGCTAATGCATCATCAGCAGCAACAGCAAGCGG----------------------------------------------------------------------------------------------------------------CAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCC---GC-------------------------------------------------------------------------CGCC-----------------------G---------------CA-------------------------GCA--GCAGCAGCA---GCACAACAGCA---ACAA------
droWil2 scf2_1100000004776:18533-18758 - ACA-----------------------------ACAA-------------------CAGCAGCAACAAC---------AACAGCAACA---GCA------------------------ACAACAA------------CAGCAG---CAGCAACAACAACAGC--AGC---AACAACAACAGCTGCAGCAGCA------------ACAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACAGCAACAGCA-ACA-------------------------------------------------ACAGC----------------------------------------------------------------------------------------------AGCAACAACAAC-----------------------------------AGCAGCAGCAACAACAGCAACAGCAACAACAACAGCAGCAAC-----------------AA--CAGCAAC------AGCA-----------------------A---------------CA-------------------------ACA--GCAGCAGCAGCAG--CAACTGCA---ACAA------
dp5 4_group4:1609251-1609460 + CTGCA-----------CGCAAACA------------------------AAAA---------------------TCTAC---------------------------------------------------------A------------------------CT------AA----------------------------------------------------------AC---------ATTC-------TTAACAACA----------------------------------------------------------------------------------------------------AACTCGTCACTAACCA---------CAC------------------------------CACACCACAC------------------------------CACTACACACCACACACCACACACC--------------ACACGAA----------------------------------AACTC----CACTCGA----------------------------------------------------------------------------------------AAA--CGAACCACTGTACCACTGTACC----ACTCGACCACCGCCTC-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAGGCAAAGCCT-------GCCA---------------CC-------------------------GCCTTTGGGCAGCA---GCTTGACTGCA---ACAG------
droPer2 scaffold_17:1717751-1717826 - GCACA-------------------------CAGTGACACATCCGGATGATAACTACAACAACAACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:9520002-9520198 + ACACGACATTGCCGCACGCCGACA------------------------AAAC---------------------AAACC---------------------------------------------------------A------------------------CT------AA----------------------------------------------------------ACAC-T-AAACACTTTTTAAACTTAAC-----------------------------------------------------------------------------------------------------AACAACTCGTCACTAACA----------------------------------------------------------------------------------------------------------CC--------------A----------------------------------------CACT-CGAACACTTGA--------------------------------------------------------------------------------ACACTTGAACACCCGACCCACTGAA--------CC----ACTGATCCACCGCATGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAAGCGAAGCCC-------GCCA---------------CC-------------------------GCATTTGGCCAGCA---GCTAGATTGCA---ACAG------
droBip1 scf7180000396580:1515669-1515863 - ACACGACTTTGCCGCACGCCGACA------------------------ATAC---------------------AAAAC---------------------------------------------------------A------------------------CT------AA----------------------------------------------------------ACAT----AACACTTTTAAAACCTAAC-----------------------------------------------------------------------------------------------------AACAACTCGTCACTAACA----------------------------------------------------------------------------------------------------------CC--------------A----------------------------------------CACT-CGAACACTTGA----------------------------------------------------------------------------------------ACACCCGACCCACTGAACCACCGAACC----ACTGATCCACCGCATGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAAGCGAAACCC-------GCCA---------------CC-------------------------GCATTTGGCCAGCA---GCTAGATTGCA---ACAG------
droKik1 scf7180000302468:157429-157485 + CGA-----------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAATCGAAGCCC-------GCCA---------------CT-------------------------GCCTTTGGCCAGCA---GCTGGATTGCA---ACAG------
droFic1 scf7180000454078:485118-485339 + GCACA---------------------------GCAG-------------------CAACAGCAACAGC---------AACA------GCAACATCAGCAGCAGCAACAGCAACA------GCAA------------C---AACAGCAGCAACAGCACCTTC-----------------------ATCATCA------------------------------------------------------------------------------CCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACATG----GGCAGCATCAGCAACATTTGACGCCAGCGGCTGTGAC--------------AA--------ATGTTAATGGAAACATTGCGCAGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCGGCTGCAGCCCCTAGATTGCTC---------------CT-------------------------GCAACTGGAC-GCA---GCAACTGTCCA---GCAG------
droEle1 scf7180000491193:3097517-3097776 - CG----------------------------CAGCAACATGC---------------AACACCAGCAGC---------AACA---------GCAA------------------CA------GCAA------------C---AACAGCAGCAACAGCAACTGCT---C---AAC-------------------------------------------------------------------AATC----------------------------------------------------------------------------------------------------------------------------------TT------------------------AGCAATGGCAATAACGTTGCCAATGGCT------------------------------CA---------------------TTGC--CGC--------------------------------------------CGCCCACG-CAATTGTTGCA-----------------------------------------------------GCATCATCTGCAACATCT-----------------------GGCGCATGTAA--------ATGTGAATGCAGCCGC----------------------------------------------------------------------------------------------TGCTGTGGTGGCAGTAGCAGCCAACAACCTGCAACAGCAACAGC------------------------AGCAGC---------AGCAAC--------------------ATGCCAAC------AGCA--------------------------------------------------------------------------ACAACA---G--CACGGGCA---ACAG------
droRho1 scf7180000777251:122685-122941 + GCACT-----------G--A--------TACAGCAG-------------------CAGCGGCAACAGC---------AGCA---------GCAA------------------CAGCAACAG---------------CAGCAGCAGCAGCAACATCAG--------CCG---C------------AGCAGCGACAGGCACAGCAGCAACACCAACAGACGAGCAACTCCAC---------ACCC-------GCAACAGCAATCCTGCGATTCACCAGCCAGAGCAATCCCACAATGACGCAACTGCAGCA---GCAGCAACAGCAGTTGGCCGTCCAGCATTTGAGCATATCGCCGCAGGGCCTCGGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAA-------TTC---GCCCAAGAGCA---CCAG------
droBia1 scf7180000302408:3091928-3092006 - ACA-----------------------------GCAA-------------------CAGCAGCAGCTGC---------AACA---------GTCG------------------CC-----------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACGTCCACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------G---------------CG---------------------------ATATCGCCGCTG---GCTCAGGTGCA---GCAG------
droTak1 scf7180000415857:650630-650949 - ACA-----------------------------ACAA-------------------CAGCAGTAGTAGC---------AACA---------ACACCAC---------------CAGCAACAA---------------CACCAA------------CAGCAATTCCACCA---C-------------------------------------------------------------------AGTG---------------------------------------------------------------------------------------------------------------------------------GTT------------------------AGTGGTGGCACCA---------------CCACGCCAGCACCACCACAACAACCACCCA-----------------------CTGC--GGT---GGC------------------------CCAGCCCGCCTCCTCGCCC---------ATGCAGCCACCCATTCAGGCGGTGCCCCAATCGCCCACGCGCAACAGCAACATGTTGCAGCAACAGCAGCAACATCAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCCACGGGC------AACG--GGCTGCAGCCC-TACGTTGCACCACAGCAGCAACATCTTGCCACCTCGCCACCCATGCAGGACTGGAACTG----GCA---G--CAGCAACA---GCAG------
droEug1 scf7180000409461:171752-171956 + AAACT------CTGCACGCCCACA------------------------AAA-----AACCAAAA--------------------------CCA------------------------AAAATA------------A------------------------AT------AA----------------------------------------------------------ACATGTAAAACACTTCTAACACCTAAC-----------------------------------------------------------------------------------------------------AACAAATCGTCACTAACACG--------------------------------------------------------------------------------------------------------CC--------------A----------------------------------------CACTCCGAACACCTGA--------------------------------------------------------------------------------AACCATGAACAC---------CGGATCACTGAACC----ACCTGGGCACCGGCTC-AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAATCGAAGCCC-------GCCA---------------CC-------------------------GCATTTGGCCAGCA---GCTAGATTGCA---ATAG------
dm3 chr3L:7862781-7862864 + GCGTT-----------CGCTTTCG----CTCAACAA-------------------CAACAACAACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCCTTGACATTG-CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---AGAA------
droSim2 x:10052322-10052529 + CAC-G-----------------------AACAGCAG-------------------CAGCAGCAGCAACAACATTGGCT--A------CCAACAA------------------CA---CCAG---------------C---AGCAGCAGCAACAGCAA--------CCG---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGATCC----------------------------------------------------------------------------------TGTCGCA-G----GCTCTG----CTGT--CGCCATCTCCG------CCGCTCAACGATCAGATCAGCTTGCTA---------------------------------------TTCCCCAAGTGCCGACCCA-AACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC---------------------------AGC-------------------------------------------------AGCA-----------------------G---------------CA-------------------------GCA--GCAGCAGCAGCAG--CAGCAGCA---ACAG------
droSec2 scaffold_8:1720845-1721064 - ACA-----------------------------GCAG-------------------CAGCAGCAGCAAC---------AGCA---------ACAGCAG---------------CAGCAGCAG---------------CAACAG------------CAGCAGTCCGGCGGCA---------------------AT----------------------------------------------AATC----------------------------------------------------------------------------------------------------------------------------------CT------------------------AGCAACGGCAGCAACTCCGCCGCCGCCT------------------------------TGTCCCT---------------------------------------------------------------------CGCCC---------ATCCGCACGCCCACGCCAGCCACGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------ACAGCAGCCACGCC---CACGGC------------------------------AGTCACGCCCACGCCCTAGCGATAGCCCACGGTC------A-------TCACGGTCT-------GCTG---------------CC-------------------------GTCGGTGG-------------------T---CCCG------
droYak3 X:14907660-14907925 - TG----------------------------CAACAA-------------------CAACAACAACAGC---------AACA---------ACAA------------------CAACAACAA---------------TAATAA------------TAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG----------------------------------------------------------TCATTCGT-------------------------------------------------------------------------------------------------------------------------GGGCCCGA--------------------------------------------------------------------------------AA--------------------GAA--------AT----ACTTTGGCAAT--------GGAAACAGCAATGGCAACAACAGTCTGCAGCAGCAGCAGCATCCATCTTCGTACTTCCAGCGGCAGCAGCAGCAGCAACAGCAAA--------------------------------------------T---GCAGCTGCAACAAGAGCAGCAG--GCGAT-----------------------------GAACAACAAC-GATGTG-----------CTGA-------------TGAAGAATCAAAATATT-------------------------GCTAACGCACAGGT---GTCTGATAGCAAGTCTAG------
droEre2 scaffold_4770:10092711-10092924 - AA----------------------------CACCAA-------------------CACTCGCCACAGC---------AACATCAGCA---ACA------------------------TCAGCAGCAGCAGCAACAAGAT---------------CATCAGC--TGCCG---CAGTCATCTTCGC------------CGTAGCAGCCGCTGCTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCATTAGCATTAGGAGCAGCAAA--------------------------------------------TTTGGCGGCGGTACCAAGAGCAACAGCAGCGGC-----------------------------AAACGTCAGC-GGATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--CCGCAGCC---GCAG------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
GCACA-----------CGCATGCACGAACACAACAACATGC---------------CACAAAAACAAC---------AACA---------ACGA------------------CAACAACAA---------------CAACAA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGACTCGTCACTAACCCAATAAAATACAT------------------------------TGCGCCGTGC------------------------------TGCCGCTTGCCACGTTTGC----CTGCCATTTTACCTG------------------------CCAACTTG-------------------------------------------------------------CAACTGCCACCTGTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGACAACAAC------------------------AACAACAAT-----------------------------AACTTACAATC------AGCTGGAGCCGAAGCCT-------GCCA---------------CC-------------------------GCCTTTGGGCAGCA---GCTCGAGTGCA---ATAG------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGCAGCA---GCTCGAGTGC..............2112.002000000000000000000000000000000000000000000000000000000000000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATC------AGCTGGAGCCGAAG.................................................................................................2112.002000000000000000000000000000000020000000000000000000000000000000
................................................................................A---------ACGA------------------CAACAACAA---------------CAACAA------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22201.55310031000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCTTGCCACGTTTGC----CTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGACTCGTCACTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------TGCGCCGTGC------------------------------TGCCGCTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAAGCCT-------GCCA---------------CC-------------------------GCCTT....................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCGTGC------------------------------TGCCGCTTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGACTCGTCACTAACCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATC------AGCTGGAGCCGAAGCCG-------.......................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGC------------------------------TGCCGCTTGCCACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCCGAAGCCT-------GCCA---------------CC-------------------------.........................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATC------AGCTGGAGCCGAAGC................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................CAA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGACTCGTCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTTGCCACGTTTGC----CTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................ACGA------------------CAACAACAA---------------CAACAA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.699404100000000000000000000000000000000000000000000000000000000000
...........................................................................................CGA------------------CAACAACAA---------------CAACAA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.6012019000000000000000000000000000000000000000000000000000000000020
............................................................................................GA------------------CAACAACAA---------------CAACAA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAACAAC------------------------AACAACAAT-----------------------------................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................A---------ACGA------------------CAACAACAA---------------CAACAA------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................CAACAA---------------CAACAA------------CAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
................................................................CAAC---------AACA---------ACGA------------------CAACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000010000000000000000000000000000000000000000000000
droMoj3
GCACA-----------C--A--------TACAACAA-------------------CAACAACAATAAT---------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGCTCACTAACCA---------AATAACAACTACAACAACAACAACAACAACTGTCGCTCCGCCT------------------------------TGTCGCTTT----GCTTTG----CTGC--TGTCACCTG------------------------CCAACCTGCCA---------------------------------------CC---------------------TGGCATGTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCCC-----------------------AGCTGGAGCCAAAGCCC-------GCCA---------------CC-------------------------GCCTTTGGGCAGCA---GCTCGAGTGCA---ACAGCAGCACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACA-----------------------------ACAA-------------------CAATAATAACAAC---------AATA---------ACAA------------------CAACAATAA---------------CAA---------------CAATAT---ATCCG---CAATC-----------AATAATAATCATAGCAACTATAGCAAG-----------------------------------------------C-TTCTGGCCAGCAGCAATATGAATACGACAGCGATGCTAATGCATCATCAGCAGCAACAGCAAGCGG----------------------------------------------------------------------------------------------------------------CAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCC---GC-------------------------------------------------------------------------CGCC-----------------------G---------------CA-------------------------GCA--GCAGCAGCA---GCACAACAGCA---ACAA------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCC---GC-------------------------------------------------------------------------CGCC-----------------------G---------------CA-------------------------GC.......................................2060.17110
droWil2
ACA-----------------------------ACAA-------------------CAGCAGCAACAAC---------AACAGCAACA---GCA------------------------ACAACAA------------CAGCAG---CAGCAACAACAACAGC--AGC---AACAACAACAGCTGCAGCAGCA------------ACAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACAGCAACAGCA-ACA-------------------------------------------------ACAGC----------------------------------------------------------------------------------------------AGCAACAACAAC-----------------------------------AGCAGCAGCAACAACAGCAACAGCAACAACAACAGCAGCAAC-----------------AA--CAGCAAC------AGCA-----------------------A---------------CA-------------------------ACA--GCAGCAGCAGCAG--CAACTGCA---ACAA------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................AACAACAGCTGCAGCAGCA------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25100010
.........................................................GCAGCAACAAC---------AACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------------------------------------------------------------------------------------------AGCAACAACAAC-----------------------------------AGCA.......................................................................................................................................................................................18200.15300030
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAAC-----------------AA--CAGCAAC------AGC............................................................................................................2370.14100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAAC-----------------AA--CA..........................................................................................................................23200.10200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAGCA-ACA-------------------------------------------------ACAGC----------------------------------------------------------------------------------------------AGCA......................................................................................................................................................................................................................................28100.10101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC-----------------------------------AGCAGCAGCAACAAC............................................................................................................................................................................20200.10200002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------------AGCAGCAGCAACAACAGCA........................................................................................................................................................................20200.10202000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAACAGCAGCA...................................................................................................................................................25200.10202000
................................................................................AGCAACA---GCA------------------------ACAACAA------------CAGCAG---CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
....................................................................................................................................................CAACAACAACAGC--AGC---AACAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200020
........................................................................................................................ACAA------------CAGCAG---CAGCAACAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--GCAGCAGCAGCAG--CAACTGCA---..........22170.06101000
..............................................................AACAAC---------AACAGCAACA---GCA------------------------ACAACAA------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAACAACAGC.......................................................................................................................................................20200.05101000
.......................................................................................................................................................................................CAGCAGCA------------ACAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...................................................................................................................................................................................................................AAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCA-ACA-------------------------------------------------ACAGC----------------------------------------------------------------------------------------------AGCAACA...................................................................................................................................................................................................................................23200.05100010
..........................................................................................................................................................................................CAGCA------------ACAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...................................................................................AACA---GCA------------------------ACAACAA------------CAGCAG---CAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC----------------------------------------------------------------------------------------------AGCAACAACAAC-----------------------------------AGCAG......................................................................................................................................................................................20200.05100010
..............................................................................................................................................................................................A------------ACAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...........................................................................................................................................................................................AGCA------------ACAGCAACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------------------------------------ACAGC----------------------------------------------------------------------------------------------AGCAACAACAAC-----------------------------------AGCAGC.....................................................................................................................................................................................25200.05100010
.........................................................GCAGCAACAAC---------AACAGCAACA---GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC----------------------------------------------------------------------------------------------AGCAACAACAAC-----------------------------------AGCA.......................................................................................................................................................................................21200.05100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACAGCAGCA...................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------AGCA-----------------------A---------------CA-------------------------ACA--GCAGCAGCA...........................22200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------AA--CAGCAAC------AGCA-----------------------A---------------CA-------------------------ACA--GCAGCAGCA...........................29200.05100100
.....................................................................................................................ACAACAA------------CAGCAG---CAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-ACA-------------------------------------------------ACAGC----------------------------------------------------------------------------------------------AGCAACAACAAC-----------------------------------...........................................................................................................................................................................................22200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------AGCA-----------------------A---------------CA-------------------------ACA--GCAGCAGC............................22200.05100010
...................................A-------------------CAGCAGCAACAAC---------AACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.................................................................................GCAACA---GCA------------------------ACAACAA------------CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACAGCAGCAAC-----------------A...............................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------AGCA-----------------------A---------------CA-------------------------ACA--GCAGCAGCAGCAG--.....................27200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAAC-----------------AA--CAGC........................................................................................................................21200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACAGCA......................................................................................................................................................20200.05100010
......................................................................................................................CAACAA------------CAGCAG---CAGCAACAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
............................................................................................A------------------------ACAACAA------------CAGCAG---CAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
.....................................................................................................................ACAACAA------------CAGCAG---CAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...................................................................................AACA---GCA------------------------ACAACAA------------CAGCAG---CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC-----------------------------------AGCAGCAGCAACAAC............................................................................................................................................................................21200.05100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC-----------------------------------AGCAGCAGCAACAA.............................................................................................................................................................................20200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC-----------------------------------AGCAGCAGCAACAACAGCAACA.....................................................................................................................................................................25200.05100100
dp5
CTGCA-----------CGCAAACA------------------------AAAA---------------------TCTAC---------------------------------------------------------A------------------------CT------AA----------------------------------------------------------AC---------ATTC-------TTAACAACA----------------------------------------------------------------------------------------------------AACTCGTCACTAACCA---------CAC------------------------------CACACCACAC------------------------------CACTACACACCACACACCACACACC--------------ACACGAA----------------------------------AACTC----CACTCGA----------------------------------------------------------------------------------------AAA--CGAACCACTGTACCACTGTACC----ACTCGACCACCGCCTC-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAGGCAAAGCCT-------GCCA---------------CC-------------------------GCCTTTGGGCAGCA---GCTTGACTGCA---ACAG------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GCACA-------------------------CAGTGACACATCCGGATGATAACTACAACAACAACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................ACAACAACAACAAC---------AACA---------ACAA------------------CAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
droAna3
ACACGACATTGCCGCACGCCGACA------------------------AAAC---------------------AAACC---------------------------------------------------------A------------------------CT------AA----------------------------------------------------------ACAC-T-AAACACTTTTTAAACTTAAC-----------------------------------------------------------------------------------------------------AACAACTCGTCACTAACA----------------------------------------------------------------------------------------------------------CC--------------A----------------------------------------CACT-CGAACACTTGA--------------------------------------------------------------------------------ACACTTGAACACCCGACCCACTGAA--------CC----ACTGATCCACCGCATGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAAGCGAAGCCC-------GCCA---------------CC-------------------------GCATTTGGCCAGCA---GCTAGATTGCA---ACAG------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ACACGACTTTGCCGCACGCCGACA------------------------ATAC---------------------AAAAC---------------------------------------------------------A------------------------CT------AA----------------------------------------------------------ACAT----AACACTTTTAAAACCTAAC-----------------------------------------------------------------------------------------------------AACAACTCGTCACTAACA----------------------------------------------------------------------------------------------------------CC--------------A----------------------------------------CACT-CGAACACTTGA----------------------------------------------------------------------------------------ACACCCGACCCACTGAACCACCGAACC----ACTGATCCACCGCATGGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAAGCGAAACCC-------GCCA---------------CC-------------------------GCATTTGGCCAGCA---GCTAGATTGCA---ACAG------SizeHit CountTotal NormTotal
No Reads
droKik1
CGA-----------------------------GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAATCGAAGCCC-------GCCA---------------CT-------------------------GCCTTTGGCCAGCA---GCTGGATTGCA---ACAG------SizeHit CountTotal NormTotal
No Reads
droFic1
GCACA---------------------------GCAG-------------------CAACAGCAACAGC---------AACA------GCAACATCAGCAGCAGCAACAGCAACA------GCAA------------C---AACAGCAGCAACAGCACCTTC-----------------------ATCATCA------------------------------------------------------------------------------CCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACATG----GGCAGCATCAGCAACATTTGACGCCAGCGGCTGTGAC--------------AA--------ATGTTAATGGAAACATTGCGCAGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCGGCTGCAGCCCCTAGATTGCTC---------------CT-------------------------GCAACTGGAC-GCA---GCAACTGTCCA---GCAG------SizeHit CountTotal NormTotal
No Reads
droEle1
CG----------------------------CAGCAACATGC---------------AACACCAGCAGC---------AACA---------GCAA------------------CA------GCAA------------C---AACAGCAGCAACAGCAACTGCT---C---AAC-------------------------------------------------------------------AATC----------------------------------------------------------------------------------------------------------------------------------TT------------------------AGCAATGGCAATAACGTTGCCAATGGCT------------------------------CA---------------------TTGC--CGC--------------------------------------------CGCCCACG-CAATTGTTGCA-----------------------------------------------------GCATCATCTGCAACATCT-----------------------GGCGCATGTAA--------ATGTGAATGCAGCCGC----------------------------------------------------------------------------------------------TGCTGTGGTGGCAGTAGCAGCCAACAACCTGCAACAGCAACAGC------------------------AGCAGC---------AGCAAC--------------------ATGCCAAC------AGCA--------------------------------------------------------------------------ACAACA---G--CACGGGCA---ACAG------SizeHit CountTotal NormTotal
No Reads
droRho1
GCACT-----------G--A--------TACAGCAG-------------------CAGCGGCAACAGC---------AGCA---------GCAA------------------CAGCAACAG---------------CAGCAGCAGCAGCAACATCAG--------CCG---C------------AGCAGCGACAGGCACAGCAGCAACACCAACAGACGAGCAACTCCAC---------ACCC-------GCAACAGCAATCCTGCGATTCACCAGCCAGAGCAATCCCACAATGACGCAACTGCAGCA---GCAGCAACAGCAGTTGGCCGTCCAGCATTTGAGCATATCGCCGCAGGGCCTCGGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAA-------TTC---GCCCAAGAGCA---CCAG------SizeHit CountTotal NormTotal
No Reads
droBia1
ACA-----------------------------GCAA-------------------CAGCAGCAGCTGC---------AACA---------GTCG------------------CC-----------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACGTCCACCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------G---------------CG---------------------------ATATCGCCGCTG---GCTCAGGTGCA---GCAG------SizeHit CountTotal NormTotal
No Reads
droTak1
ACA-----------------------------ACAA-------------------CAGCAGTAGTAGC---------AACA---------ACACCAC---------------CAGCAACAA---------------CACCAA------------CAGCAATTCCACCA---C-------------------------------------------------------------------AGTG---------------------------------------------------------------------------------------------------------------------------------GTT------------------------AGTGGTGGCACCA---------------CCACGCCAGCACCACCACAACAACCACCCA-----------------------CTGC--GGT---GGC------------------------CCAGCCCGCCTCCTCGCCC---------ATGCAGCCACCCATTCAGGCGGTGCCCCAATCGCCCACGCGCAACAGCAACATGTTGCAGCAACAGCAGCAACATCAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCCACGGGC------AACG--GGCTGCAGCCC-TACGTTGCACCACAGCAGCAACATCTTGCCACCTCGCCACCCATGCAGGACTGGAACTG----GCA---G--CAGCAACA---GCAG------SizeHit CountTotal NormTotal
No Reads
droEug1
AAACT------CTGCACGCCCACA------------------------AAA-----AACCAAAA--------------------------CCA------------------------AAAATA------------A------------------------AT------AA----------------------------------------------------------ACATGTAAAACACTTCTAACACCTAAC-----------------------------------------------------------------------------------------------------AACAAATCGTCACTAACACG--------------------------------------------------------------------------------------------------------CC--------------A----------------------------------------CACTCCGAACACCTGA--------------------------------------------------------------------------------AACCATGAACAC---------CGGATCACTGAACC----ACCTGGGCACCGGCTC-AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGGAATCGAAGCCC-------GCCA---------------CC-------------------------GCATTTGGCCAGCA---GCTAGATTGCA---ATAG------SizeHit CountTotal NormTotal
No Reads
dm3
GCGTT-----------CGCTTTCG----CTCAACAA-------------------CAACAACAACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGCCTTGACATTG-CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---AGAA------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
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Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
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Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
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Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
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Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
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Ovary		V064
Ovary		V0642
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Ovary		V066
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S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
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CME-W2		V086
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fGS/OSS		V092
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S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
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Head		V138
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Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...................................................................C---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................AACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................ACAACAACAAC---------AACA---------ACAA------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACAA-------------------CAACAACAACAAC---------AACA---------ACAA------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................ACAACAACAAC---------AACA---------ACAA------------------CAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AA-------------------CAACAACAACAAC---------AACA---------ACAA------------------CAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CAACAACAACAAC---------AACA---------AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................CAA------------------CAACAACAA---------------CAACAA------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CAACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................C---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................A-------------------CAACAACAACAAC---------AACA---------ACAA------------------CAACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................AC---------AACA---------ACAA------------------CAACAACAA---------------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AACAAC---------AACA---------ACAA------------------CAACAACAA---------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AA-------------------CAACAACAACAAC---------AACA---------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CAACAACAAC---------AACA---------ACAA------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CAACAACAACAAC---------AACA---------ACAA------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AACAACAACAAC---------AACA---------ACAA------------------CAACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AACAACAACAAC---------AACA---------AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAA-------------------CAACAACAACAAC---------AACA---------ACAA------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAA-------------------CAACAACAACAAC---------AACA---------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CAAC---------AACA---------ACAA------------------CAACAACAA---------------CAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................ACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................CAACAACAACAAC---------AACA---------ACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................CAACAACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CA---------ACAA------------------CAACAACAA---------------CAACAA------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAACAA-------------------CAACAACAACAAC---------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................ACAACAACAAC---------AACA---------ACAA------------------CAACAACAA---------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CAAC---------AACA---------ACAA------------------CAACAACAA---------------CAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAACAA-------------------CAACAACAACAAC---------AACA---------ACAA------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AAC---------AACA---------ACAA------------------CAACAACAA---------------CAACAA------------CAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AACAACAACAAC---------AACA---------ACAA------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CAA-------------------CAACAACAACAAC---------AACA---------ACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAACAA-------------------CAACAACAACAAC---------AACA---------ACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AACAAC---------AACA---------ACAA------------------CAACAACAA---------------CAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AACAACAAC---------AACA---------ACAA------------------CAACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AACAACAAC---------AACA---------ACAA------------------CAACAACAA---------------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAC-G-----------------------AACAGCAG-------------------CAGCAGCAGCAACAACATTGGCT--A------CCAACAA------------------CA---CCAG---------------C---AGCAGCAGCAACAGCAA--------CCG---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGATCC----------------------------------------------------------------------------------TGTCGCA-G----GCTCTG----CTGT--CGCCATCTCCG------CCGCTCAACGATCAGATCAGCTTGCTA---------------------------------------TTCCCCAAGTGCCGACCCA-AACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC---------------------------AGC-------------------------------------------------AGCA-----------------------G---------------CA-------------------------GCA--GCAGCAGCAGCAG--CAGCAGCA---ACAG------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................CCG---C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTGATCC----------------------------------------------------------------------------------TGTCGCA-G----GCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-G----GCTCTG----CTGT--CGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.................................................................................................................A---CCAG---------------C---AGCAGCAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC---------------------------AGC-------------------------------------------------AGCA-----------------------G---------------....................................................................19200.05100010000000000000
................................................................................................................CA---CCAG---------------C---AGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000001000000000
droSec2
ACA-----------------------------GCAG-------------------CAGCAGCAGCAAC---------AGCA---------ACAGCAG---------------CAGCAGCAG---------------CAACAG------------CAGCAGTCCGGCGGCA---------------------AT----------------------------------------------AATC----------------------------------------------------------------------------------------------------------------------------------CT------------------------AGCAACGGCAGCAACTCCGCCGCCGCCT------------------------------TGTCCCT---------------------------------------------------------------------CGCCC---------ATCCGCACGCCCACGCCAGCCACGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------ACAGCAGCCACGCC---CACGGC------------------------------AGTCACGCCCACGCCCTAGCGATAGCCCACGGTC------A-------TCACGGTCT-------GCTG---------------CC-------------------------GTCGGTGG-------------------T---CCCG------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................CA---------ACAGCAG---------------CAGCAGCAG---------------CAACAG------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
droYak3
TG----------------------------CAACAA-------------------CAACAACAACAGC---------AACA---------ACAA------------------CAACAACAA---------------TAATAA------------TAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG----------------------------------------------------------TCATTCGT-------------------------------------------------------------------------------------------------------------------------GGGCCCGA--------------------------------------------------------------------------------AA--------------------GAA--------AT----ACTTTGGCAAT--------GGAAACAGCAATGGCAACAACAGTCTGCAGCAGCAGCAGCATCCATCTTCGTACTTCCAGCGGCAGCAGCAGCAGCAACAGCAAA--------------------------------------------T---GCAGCTGCAACAAGAGCAGCAG--GCGAT-----------------------------GAACAACAAC-GATGTG-----------CTGA-------------TGAAGAATCAAAATATT-------------------------GCTAACGCACAGGT---GTCTGATAGCAAGTCTAG------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAAGAGCAGCAG--GCGAT-----------------------------GA..............................................................................................................................2417.00700000000007
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAAGAGCAGCAG--GCGAT-----------------------------GAACA...........................................................................................................................2711.00101000000000
droEre2
AA----------------------------CACCAA-------------------CACTCGCCACAGC---------AACATCAGCA---ACA------------------------TCAGCAGCAGCAGCAACAAGAT---------------CATCAGC--TGCCG---CAGTCATCTTCGC------------CGTAGCAGCCGCTGCTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCATTAGCATTAGGAGCAGCAAA--------------------------------------------TTTGGCGGCGGTACCAAGAGCAACAGCAGCGGC-----------------------------AAACGTCAGC-GGATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--CCGCAGCC---GCAG------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................AGCAGCAACAAGAT---------------CATCAGC--T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2218.0081001510
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--CCGC.................2616.0061100400
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTAGCATTAGGAGCAGC.............................................................................................................................................................................................................................................2115.0050001220
.................................................................................................................................GCAACAAGAT---------------CATCAGC--TGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0051301000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAA--------------------------------------------TTTGGCGGCGGTACCAAGA...........................................................................................................................................................................2514.0040000310
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAAGAGCAACAGCAGC................................................................................................................................................................2014.0040100210
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------TTTGGCGGCGGTACCAAGA...........................................................................................................................................................................2113.0032000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTAGCATTAGGAGC................................................................................................................................................................................................................................................1813.0030100020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCAACAGCAGCGGC-----------------------------................................................................................................................................1913.0030000120
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--CC...................2413.0030000210
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGAGCAGCAAA--------------------------------------------TTTGGCGGCG....................................................................................................................................................................................2513.0031000110
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCGGC-----------------------------AAACGTCAGC-GG...................................................................................................................2613.0032100000
...................................................................................................................................AACAAGAT---------------CATCAGC--TGCCG---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCGGC-----------------------------AAACGT..........................................................................................................................2012.0021000010
...............................................................ACAGC---------AACATCAGCA---ACA------------------------TCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000020
.............................................................................AACATCAGCA---ACA------------------------TCAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0022000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAAGAGCAACAGCAGCG...............................................................................................................................................................2112.0020000110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAAGAGCAACAGCAGCGGC-----------------------------................................................................................................................................2312.0020200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAGAGCAACAGCAGCGGC-----------------------------................................................................................................................................2112.0020100100
.................................................................................................................................................................................................................GCTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGC...............................................................................................................................................................................................................................................................2012.0022000000
..............................................................................................................................GCAGCAACAAGAT---------------CATCAGC--T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAGCATTAGGAGCAGC.............................................................................................................................................................................................................................................2012.0020001100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--C....................2312.0020000200
.......................................................................................................................................................................G---CAGTCATCTTCGC------------CGTAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCATTAGCATTAGGAGCA...............................................................................................................................................................................................................................................2212.0021000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACCAAGAGCAACAGCAGC................................................................................................................................................................2112.0020000200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--CCGC.................2412.0020000110
.............................................................................AACATCAGCA---ACA------------------------TCAGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................GCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCATTAGCATTAGGC..................................................................................................................................................................................................................................................2711.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGC-GGATCG-----------GAGT-------------CGGAGTC-------------------------------------CT.....................................2411.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCGGC-----------------------------AAACGTCAGC-.....................................................................................................................2411.0010001000
....................................................................................................................................ACAAGAT---------------CATCAGC--TGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................GCCG---CAGTCATCTTCGC------------CGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGTC-------------------------------------CTTGGA---------G--CCGCA................1911.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACCAAGAGCAACAGCAGCGGC-----------------------------................................................................................................................................2411.0010000010
......................................................................................................................................................................CG---CAGTCATCTTCGC------------CGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGTACCAAGAGCAACAGC...................................................................................................................................................................2111.0011000000
...............................................................................................................................................................................CATCTTCGC------------CGTAGCAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..............................................................................................................................................................................................................GCTGCTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG................................................................................................................................................................................................................................................................2211.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCATTAGGAGCAGCAAA--------------------------------------------TTT...........................................................................................................................................................................................2311.0010000010
.......................................................CACTCGCCACAGC---------AACATCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...................................................................................................................................AACAAGAT---------------CATCAGC--TGCCG---CAGTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGGC-----------------------------AAACGTCAGC-GGATCG-----------GA..................................................................................................2511.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--CC...................2311.0010000100
.....................................................................................................................................................................................................GTAGCAGCCGCTGCTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCT---------------TCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCATTAGGAGCAGCAAA--------------------------------------------TTTGGC........................................................................................................................................................................................2711.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC-GGATCG-----------GAGT-------------CGGA...............................................................................1811.0010000100
.............................................................................AACATCAGCA---ACA------------------------TCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
......................................................................................................................CAGCAGCAGCAGCAACAAGAT---------------CATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...................................................................................................................................AACAAGAT---------------CATCAGC--TGCCG---CAGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTAGCATTAGGAGCAGC.............................................................................................................................................................................................................................................1911.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGCAGCAAA--------------------------------------------TTTGGCGGCGG...................................................................................................................................................................................2411.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTAGGAGCAGCAAA--------------------------------------------TTTGGCG.......................................................................................................................................................................................2511.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACCAAGAGCAACAGC...................................................................................................................................................................1811.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------G--CC...................2511.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................T---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCATTAGCATTAGGAGC................................................................................................................................................................................................................................................2611.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGTACCAAGAGCAACAGCAGC................................................................................................................................................................2411.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGAGCAGCAAA--------------------------------------------TTTG..........................................................................................................................................................................................1911.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGCAGCAAA--------------------------------------------TTTGGCGGCGGTACT...............................................................................................................................................................................2811.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCATTAGGAGCAGCAAA--------------------------------------------TTTGGCG.......................................................................................................................................................................................2711.0011000000
............................................................................................................................................................TCAGC--TGCCG---CAGTCATCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.............................................................................AACATCAGCA---ACA------------------------TCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..............................CACCAA-------------------CACTCGCCACAGC---------AACATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
................................CCAA-------------------CACTCGCCACAGC---------AACATCAGCA---A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.................................................................................................................................................................................TCTTCGC------------CGTAGCAGCCGCTGCTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
................................................................CAGC---------AACATCAGCA---ACA------------------------TCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0020200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCATTAGGAGCAGCAAA--------------------------------------------TTTGGCGG......................................................................................................................................................................................2911.0010100000
.....................................................................................................................................................................CCG---CAGTCATCTTCGC------------CGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...........................................................................................................................GCAGCAGCAACAAGAT---------------CATCAGC--T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------TTTGGCGGCGGTACCAAGAGCAACA.....................................................................................................................................................................2711.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAA--------------------------------------------TTTGGCGGCGG...................................................................................................................................................................................1911.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCAGC-GGATCG-----------GAGT-------------CGGA...............................................................................2111.0010000010
...........................................................................................................................................................ATCAGC--TGCCG---CAGTCATCTTCGC------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCGGC-----------------------------AAACGTCAGC-G....................................................................................................................2311.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCGGC-----------------------------AAACGT..........................................................................................................................1811.0010000010
.A----------------------------CACCAA-------------------CACTCGCCACAGC---------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................................................................................................................................................TAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCATTAGCATTAGG...................................................................................................................................................................................................................................................3011.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAACAGCAGCGGC-----------------------------AAACGT..........................................................................................................................2311.0011000000
..............................CACCAA-------------------CACTCGCCACAGC---------AAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..............................................................CACAGC---------AACATCAGCA---ACA------------------------TCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAA--------------------------------------------TTTGGCGGCGGTACC...............................................................................................................................................................................2111.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-------------------------------------CTTGGA---------G--CCGCAGCC---..........1811.0010000010
.................................................................AGC---------AACATCAGCA---ACA------------------------TCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCATTAGGAGCAGC.............................................................................................................................................................................................................................................1811.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGTC-------------------------------------CTTGGA---------G--CCGC.................1811.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA--------------------------------------------TTTGGCGGCGGTACCAA.............................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGG..................................2211.0010000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCAACAGCAGCGGC-----------------------------AAACGTCAG.......................................................................................................................2811.0010000100
..........................................................................................................................................................CATCAGC--TGCCG---CAGTCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.......................................................................................................................................AGAT---------------CATCAGC--TGCCG---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.......................................................................................................................................................................G---CAGTCATCTTCGC------------CGTAGCAGCCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAA--------------------------------------------TTTGGCGGCG....................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GGATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGGA---------........................2411.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-GGATCG-----------GAGT-------------CGGAGTC-------------------------------------.......................................2011.0010001000
..........................................................................................ACA------------------------TCAGCAGCAGCAGCAACAAGAT---------------CAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGCATTAGGAGCAGCAAA--------------------------------------------TTTG..........................................................................................................................................................................................2511.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTACCAAGAGCAACAGCAGCGGC-----------------------------A...............................................................................................................................2711.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGCGGTACCAAGAGCAACAGC...................................................................................................................................................................2511.0011000000
................................................................................................................................AGCAACAAGAT---------------CATCAGC--TGCCG---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
.............................................................................................................................AGCAGCAACAAGAT---------------CATCAGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
...............................................................................................................................CAGCAACAAGAT---------------CATCAGC--TGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
............................................................................................A------------------------TCAGCAGCAGCAGCAACAAGAT---------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTCAGC-GGATCG-----------GA..................................................................................................1811.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGAGCAGCAAA--------------------------------------------TTTGGCGGC.....................................................................................................................................................................................2411.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCAAGAGCAACAGCAGCGGC-----------------------------A...............................................................................................................................2411.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAA--------------------------------------------TTTGGCGGCGGTA.................................................................................................................................................................................1911.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTCAGC-GGATCG-----------GAGT-------------CGG................................................................................2311.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGCAGCAAA--------------------------------------------TTTGGCGGCGGTACCA..............................................................................................................................................................................2911.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAGCATTAGGAGCAGCAAA--------------------------------------------TTTG..........................................................................................................................................................................................2711.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTACCAAGAGCAACAGCAGCGGC-----------------------------AAAC............................................................................................................................2911.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------AAACGTCAGC-GGATCG-----------GAGG-------------...................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAGAGCAACAGCAGCGGC-----------------------------AAACG...........................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGCATTAGC.........................................................................................................................................................................................................................................................2011.0011000000
......................................................................................................................................................................CG---CAGTCATCTTCGC------------CGTAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
..........................................................................................................................................................CATCAGC--TGCCG---CAGTCATCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCG-----------GAGT-------------CGGAGTC-------------------------------------CTTGG..................................2011.0010010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAA--------------------------------------------TTTGGCGGCGGTACCAAGA...........................................................................................................................................................................2611.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGCAGCAAA--------------------------------------------TTTGGCGGCGGT..................................................................................................................................................................................2511.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------AAACGTCAGC-GGATCG-----------GA..................................................................................................1911.0010000010
...........................................................................................................................GCAGCAGCAACAAGAT---------------CATCAGC--TG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
................................................................................................................................AGCAACAAGAT---------------CATCAGC--TGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
................................................................................................................................AGCAACAAGAT---------------CATCAGC--T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.........................................................................................................................CAGCAGCAGCAACAAGAT---------------CATCAGC--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGAGCAGCAAA--------------------------------------------TTTGGC........................................................................................................................................................................................2111.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------TTTGGCGGCGGTACCAAGAGC.........................................................................................................................................................................2311.0010000100
..............................................................................................................................................................................TCATCTTCGC------------CGTAGCAGCCGCTGCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAA--------------------------------------------TTTGGCGGCGGTACCAAGA...........................................................................................................................................................................2411.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-------------------------------------CTTGGA---------G--CCGCAGCC---GC........2011.0011000000
..................................................................................................................................CAACAAGAT---------------CATCAGC--TGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..........................................................................................................................................................................................................AGCCGCTGCTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCT---------------TCGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG................................................................................................................................................................................................................................................................2611.0011000000
.................................................................................................................................GCAACAAGAT---------------CATCAGC--T..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCGGC-----------------------------AAACGT..........................................................................................................................2111.0010001000
............................................................................................A------------------------TCAGCAGCAGCAGCAACAAGAT---------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTCAGC-GGATCG-----------GAGT-------------CGGAGTC-------------------------------------.......................................2711.0010100000
................................................................................ATCAGCA---ACA------------------------TCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5011000000
...............................................................ACAGC---------AACATCAGCA---ACA------------------------TCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010100000
..............................................................CACAGC---------AACATCAGCA---ACA------------------------TCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAGAGCAACAGCAGC................................................................................................................................................................1820.5010000010
.............................................................................AACATCAGCA---ACA------------------------TCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310100000
...............................................................................CATCAGCA---ACA------------------------TCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010010000
..................................................................................CAGCA---ACA------------------------TCAGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
...................................................................................AGCA---ACA------------------------TCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
......................................................................................A---ACA------------------------TCAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000
..................................................................................CAGCA---ACA------------------------TCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
...........................................................................................CA------------------------TCAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000

Generated: 05/16/2015 at 08:19 PM