ID:

dvi_10960

 Coordinate:

scaffold_12963:8546110-8546260 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.3 -27.3 -27.3

Flybase annnotation

exon [dvir_GLEANR_1011:2]; CDS [Dvir\GJ10166-cds]; intron [Dvir\GJ10166-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTTGAAATTGGGACATTCGGTTCACATCAGTTGACATGCTGCTAGGTCTGCAAATCTGTGGAACTCAATTGAGAATGATGGCCCGCTAATCAATGGCAATCGAGGCTCGTTCTCTTTTTGCGCGAAATTCAATTAGTTGTAGATCGTGTGGAATATGGATGGAAATGTTATAGAAATATTAATCGATGGTCTTAATGCAGGAATGCAACACAACGCTGTGCGACTGCAAGGGCATCAAGGGACGCATGGG
**************************************************(((..............((..((((((((..((((((((.....)))....)).)))))))))))..)).((((((....(((....)))....))))))(((.(((.(((...((((((.....)))))).))).))).)))...)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M061
embryo
 GSM1528803
follicle cells		 SRR060666
160_males_carcasses_total
 V047
embryo
 M027
male body		 SRR060667
160_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060678
9x140_testes_total
 SRR060679
140x9_testes_total
 SRR060683
160_testes_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR1106713
embryo_0-2h
 V053
head
 SRR060689
160x9_testes_total
 SRR1106728
larvae
 SRR060682
9x140_0-2h_embryos_total
 SRR060685
9xArg_0-2h_embryos_total
 V116
male body
......................TCACATCAGTTGACATGCTGCTAGGTC.......................................................................................................................................................................................................... 27 0 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GAATGCAACACAACGCTGTGCGACT......................... 25 0 1 2.00 2 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................ATTAATCGATGGTCTTAATGCAGGA................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCTGTGCGACTGCAAGGGC................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ATCGATGGTCTTAATGCAGGAATGCAA.......................................... 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...TGAAATTGGGACATTCGGTTC................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ACACAACGCTGTGCGACTGCAAGGGC................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCTGTGCGACTGCAAGGGCATCAAG........... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTAATGCAACACAACGCTGTGCGT........................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGCAAGGGCATCAAGGGA........ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AATGCAACACAACGCTGTGCGA........................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CAACGCTGTGCGACTGCAAGGGC................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................AGATCGTGTGGAATATGGATGGA....................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ACGCTGTGCGACTGCAAGGG.................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAACACAACGATATGCGACTGCA...................... 23 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAAGGAATGCAACACAACGCTGTGCGA........................... 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTAGTTGTAGATCGTGTGGAATAAA............................................................................................. 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AAGGGCATCAAGGGACGCATG.. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCTGTGTGACTGCAAGGGCATC.............. 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AACACAACGCTGTGCGACTGCAAGGGCATC.............. 30 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................AAAGGAATGCAACACAACGCTGTGCGACT......................... 29 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................TGAGTATGACGGCACGCTA.................................................................................................................................................................. 19 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................CATCAATTGAGATTCTGCTAG............................................................................................................................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........TGGGACATCCTGTTCACGTC.............................................................................................................................................................................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
........................ACATCAATTGAGATTCTGCTA.............................................................................................................................................................................................................. 21 3 9 0.22 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0
......AATTGGGACCTTCGG...................................................................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...............ATACGGTTCACATGAGTT.......................................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GATGGTCTTATGGCTGGAA............................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TAAACTTTAACCCTGTAAGCCAAGTGTAGTCAACTGTACGACGATCCAGACGTTTAGACACCTTGAGTTAACTCTTACTACCGGGCGATTAGTTACCGTTAGCTCCGAGCAAGAGAAAAACGCGCTTTAAGTTAATCAACATCTAGCACACCTTATACCTACCTTTACAATATCTTTATAATTAGCTACCAGAATTACGTCCTTACGTTGTGTTGCGACACGCTGACGTTCCCGTAGTTCCCTGCGTACCC
**************************************************(((..............((..((((((((..((((((((.....)))....)).)))))))))))..)).((((((....(((....)))....))))))(((.(((.(((...((((((.....)))))).))).))).)))...)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060660
Argentina_ovaries_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 SRR060659
Argentina_testes_total
 SRR060684
140x9_0-2h_embryos_total
 M061
embryo
 SRR060675
140x9_ovaries_total
.............................................................................CTACCGGGCGATTAGTTACC.......................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................CGCGCTTAAAGTTAATCAAC............................................................................................................... 20 1 2 0.50 1 0 0 1 0 0 0 0
...............................................................................GCCGGGCGATTATTTAGCGTTA...................................................................................................................................................... 22 3 2 0.50 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................TCGCGTTGCGAAACGCTGACGT...................... 22 3 4 0.25 1 0 0 0 1 0 0 0
.................................................................................CTGGCGATTATTTAGCGTTA...................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 1 0 0
........................................................................................TTAGTTACCGTTAGCCTC................................................................................................................................................. 18 2 11 0.09 1 0 1 0 0 0 0 0
...............................................................................................................AGAGAAAAATGGGCTCTAA......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1
......................GGTGTAGATAACTGTACGA.................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:8546060-8546310 - dvi_10960 ATTTGAAATTGGGACATTCGGTTCACATC-------AGTTGACAT--------GCTGCTAGGTCTGCAAATCTGTGGAACTCAATTGAGAATGATGGCC-CGCTAATCAA---TGGCAATCGAGGCTCGTTCTCT-----TT--TT----------------GCGCGAAATTCAATTAGTTGTAGATCGTGTGGAATATGGAT--------------------------------------------------------------------------------------------------------------------GGAAATGTTATAGAAATATTAATC---------GA--TGGTC--TTAATGCAGGAATGCAACACAACGCTGTGCGACTGCAAGGGCATCAAGGGACGCATGGG--
droMoj3 scaffold_6500:1158336-1158646 - ATTTGA-ATTGGGACAGTT----AACAGTTATAGGCATGAATCATATATCTATGCACTTAA----GTAAATCTATGGAACTCAATTAAGAATGATGAC--TGCTAATCAATCAAGGCAATCAAGGCGCGTTCTCC----------A----------------GTGCGAAATTCAATTACCCAT----T---------------------ATATGTATATATGTATATATACTTATGTCTTTTATTTGGATGTAGTTTCACAGATATATGAA-CGAAATCAA-----------------------------GTGAAT--CAATATT-------------TAATTTGTTTTTGT--T-TCTTTT-TTTTTTCAGGAATGCAATACAACGCTGTGCGACTGCAAAGGCATCAAAGGACGCATGGG--
droGri2 scaffold_15252:11740695-11740961 - ATTCGA-ATTAGGACAATCAGTTCATTTC-------ACAAATCAT--------------AA----ATAAAACTATGAAGCTCAATTGAGAATGATGACAGCGCTAATCAA---TGGCAATCAGGGCTCGATCGA--AG-------------------CG-----AAGAAATTCAATTAGTTGT----TG-----TATTTCGATTCAAATATTTGTAGATATATTTATA------------------------------ATAGTCATAAGAAGTGGAA---GCAGTTAGTCTC-ATGGCTTGTTA--------------------------------------------------------AC-CGATTTCAGACTTGCAACAACACGATATGCGACTGCAAGGGCATCAAGGGACGTATTGG--
droWil2 scf2_1100000004585:8347232-8347351 - T------------------------------------------------------------------------------------------------------TGGCG-----------------------------------------------------------------------------AATGCATGGAATAT-------------------------------------------------------------------------------CAA-----------------------------GTAAAT--CGGAATTATTTGAATACTAATAATT-------------TATATTTGATTTTTAGGAATGCAATAGTACAGTATGCGATTGCAAGGGCCTGAAGGGAAGAATTGG--
dp5 4_group4:1536912-1537067 - C------------------------------------------------------------------------------------------------------TAATCAG---AGACAATCAAGACTTGTTCTCGAAT-------------------TAT-----TGAAACCCAATTCGG-GT----CG-----TCTGTCAATGCT-------------------------------------------------------------------------AACTGATGGACTCTACGATTCTCTAATTA-----------------------------------------------------T-CAATTTTAGGAATGCAATACAACGCTGTGTGACTGCAAGGGCATCAAAGGACGCATGGG--
droPer2 scaffold_10:540803-540958 - C------------------------------------------------------------------------------------------------------TAATCAG---AGACAATCAAGACTTGTTCTCGAAT-------------------TAT-----TGAAACCCAATTCGG-GT----CG-----TCTGTCAATGCT-------------------------------------------------------------------------AACTGATGGACTCTACGATTCTCTAATTA-----------------------------------------------------T-CAATATTAGGAATGCAATACAACGCTGTGTGACTGCAAGGGCATCAAAGGACGCATGGG--
droAna3 scaffold_12916:13648374-13648432 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAGGAATGTAACACAACAGTATGTGACTGCAAAGGCATCAAAGGACGACAGGG--
droBip1 scf7180000396535:618858-618912 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAATGTAACACAACGGTATGTGACTGCAAAGGCATCAAAGGAAAACAGGGAG
droKik1 scf7180000302271:138585-138737 - A-----------------------------------------------------------------------------------------A---TGATAGCTCCAATCAG---GGGCAATCAAGACCAGTTCTCGGACCGATTCCT----------------CTACGAAATTCGATTGGTTTC----------------------C--------------------------------------------------------------------AACTCAA-----------------------------CTGAAT--A-----------------------------------CTCCTTC--TTCTGGCAGGTCTGCAACACCACGCTATGTGACTGCAAGGGTATCAAGGGTCGCATCGG--
droFic1 scf7180000453842:1231967-1232025 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAGATCTGCAACACAACGCTATGTGATTGCAAGGGAATTAAGGGACGAGTGGG--
droEle1 scf7180000491273:216712-216764 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATATGCAACACTACGCTATGCGACTGCAAGGGCATCAAAGGACGTGTTGG--
droRho1 scf7180000777055:88391-88498 - A--------------------------------------------------------------------------------------------------------ATCAG---GGGCAATCAAGACTAGTTCTAT-----T-----------------------TAAAAATTCGATTTGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTGTTCCAGATCTGCAACGAAACGATATGCGACTGCAAGGGCCTTAAGGGATATGTTGG--
droBia1 scf7180000302261:444744-444882 - C------------------------------------------------------------------------------------------------------CAATCAG---GGGCAATCAAGACTCGCACA--------CTCCTTGG----------------C-ACATTTTATTAGTTCC--------------------TCG-------------------------------------------------------------------------AACTGAC------------------------GGGAAATGG-----------------------------------CACATTCT-ACTTTGCAGATCTGCAACACGACGGTGTGCGACTGCAAGGGCATCAAGGGACGCCAAGG--
droTak1 scf7180000415204:133395-133570 + ACCCAA-A--------------------------------------------------------------------------------------TGAGAGTTCCAATCAG---GGGCAATCAAGACCACTTCTAT-----ATTCCTTGGTATATATTCAGTGGTACAAAATTCTATTAGTTCC--------------------CCC-------------------------------------------------------------------------GACTGACTGGC-------------AAGTATC------------------------------------------AA--TTTTCT-TTATTCCAGATTTGCAATACGACGCTATGCGACTGCAAGGGCATCAAGGGACGCATGGG--
droEug1 scf7180000409005:902561-902632 - AAATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TATGCC-ACATTGCAGATATGTAACACAACGATATGTGACTGCAAGGGCATAAAGGGACGAGCCGG--
dm3 chr2L:5018708-5018854 - A--------------------------------------------------------------------------------------------------------ATCAG---AGGCAATCAAGCCTGGTTCCAT-----ATTCCTTGG-------------------GC--------------TACCGTGTGCTATATAGTT-TATACATATGTACATATATATATA--------------------------------------------------------------------------------------------------------------------------------TACGCT-TGATTTCAGATCTGCAACACAACGCTATGCGACTGCAAAGGAATCAAGGGACGCATGGG--
droSim2 2l:4831928-4831993 - A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCT-TGATTTCAGATCTGCAACACAACGATATGCGACTGCAAAGGAATCAAGGGACGCATGGG--
droSec2 scaffold_5:3105101-3105166 - A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCT-TGATTTCAGATCTGCAACACAACGCTATGCGACTGCAAAGGAATCAAGGGACGCATGGG--
droYak3 2L:10507136-10507188 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCTGCAACACAACGCTATGCGACTGCAAGGGAATCAAGGGACGCATGGG--
droEre2 scaffold_4929:5097154-5097206 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCTGTAATACAACGATATGCGATTGCAAAGGAATCAAGGGACGTATGGG--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ATTTGAAATTGGGACATTCGGTTCACATC-------AGTTGACAT--------GCTGCTAGGTCTGCAAATCTGTGGAACTCAATTGAGAATGATGGCC-CGCTAATCAA---TGGCAATCGAGGCTCGTTCTCT-----TT--TT----------------GCGCGAAATTCAATTAGTTGTAGATCGTGTGGAATATGGAT--------------------------------------------------------------------------------------------------------------------GGAAATGTTATAGAAATATTAATC---------GA--TGGTC--TTAATGCAGGAATGCAACACAACGCTGTGCGACTGCAAGGGCATCAAGGGACGCATGGG--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................TCACATC-------AGTTGACAT--------GCTGCTAGGTC........................................................................................................................................................................................................................................................................................................................................................................2714.004000000000000000000000000000000000000000000000000000000000000004
....................................................................................................................................................................................................................................................................................................................................................................................GAATGCAACACAACGCTGTGCGACT...........................2512.002000100000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................ATTAATC---------GA--TGGTC--TTAATGCAGGA..................................................2511.001000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGCGACTGCAAGGGC...................1911.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................ATC---------GA--TGGTC--TTAATGCAGGAATGCAA............................................2711.001000000000000000000000000000010000000000000000000000000000000000
...TGAAATTGGGACATTCGGTTC................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACACAACGCTGTGCGACTGCAAGGGC...................2611.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGCGACTGCAAGGGCATCAAG.............2511.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAGGGCATCAAGGGA..........1911.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................AATGCAACACAACGCTGTGCGA.............................2211.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAACGCTGTGCGACTGCAAGGGC...................2311.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................AGATCGTGTGGAATATGGAT--------------------------------------------------------------------------------------------------------------------GGA......................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGTGCGACTGCAAGGG....................2011.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TTAGTTGTAGATCGTGTGGAATAAA................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAGGGCATCAAGGGACGCATG....2111.001000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AACACAACGCTGTGCGACTGCAAGGGCATC................3011.001000000000000000000000000000000000000000001000000000000000000000
droMoj3
ATTTGA-ATTGGGACAGTT----AACAGTTATAGGCATGAATCATATATCTATGCACTTAA----GTAAATCTATGGAACTCAATTAAGAATGATGAC--TGCTAATCAATCAAGGCAATCAAGGCGCGTTCTCC----------A----------------GTGCGAAATTCAATTACCCAT----T---------------------ATATGTATATATGTATATATACTTATGTCTTTTATTTGGATGTAGTTTCACAGATATATGAA-CGAAATCAA-----------------------------GTGAAT--CAATATT-------------TAATTTGTTTTTGT--T-TCTTTT-TTTTTTCAGGAATGCAATACAACGCTGTGCGACTGCAAAGGCATCAAAGGACGCATGGG--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................TACAACGCTGTGCGACTGCAAAGGCA..................2612.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................TGCGACTGCAAAGGCATCAAAGGAC.........2511.001100000
droGri2
ATTCGA-ATTAGGACAATCAGTTCATTTC-------ACAAATCAT--------------AA----ATAAAACTATGAAGCTCAATTGAGAATGATGACAGCGCTAATCAA---TGGCAATCAGGGCTCGATCGA--AG-------------------CG-----AAGAAATTCAATTAGTTGT----TG-----TATTTCGATTCAAATATTTGTAGATATATTTATA------------------------------ATAGTCATAAGAAGTGGAA---GCAGTTAGTCTC-ATGGCTTGTTA--------------------------------------------------------AC-CGATTTCAGACTTGCAACAACACGATATGCGACTGCAAGGGCATCAAGGGACGTATTGG--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
T------------------------------------------------------------------------------------------------------TGGCG-----------------------------------------------------------------------------AATGCATGGAATAT-------------------------------------------------------------------------------CAA-----------------------------GTAAAT--CGGAATTATTTGAATACTAATAATT-------------TATATTTGATTTTTAGGAATGCAATAGTACAGTATGCGATTGCAAGGGCCTGAAGGGAAGAATTGG--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................GTACAGTATGCGATTGCAAGGGC...................2313.00301020
............................................................................................................................................................................................................................................................................................................................................................................................TAGTACAGTATGCGATTGCAAGGGCC..................2611.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................AATAGTACAGTATGCGATT...........................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................GTACAGTATGCGATTGCAAG......................2011.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................AATAGTACAGTATGCGATTGC.........................2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................AGTATGCGATTGCAAGGGCCT.................2111.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................ATAGTACAGTATGCGATT...........................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................GGAATGCAATAGTACAGTATGCGAT............................2511.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................GTACAGTATGCGATTGCAAGGGCCT.................2511.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................AGTACAGTATGCGATTGCAAGGGC...................2411.00100010
dp5
C------------------------------------------------------------------------------------------------------TAATCAG---AGACAATCAAGACTTGTTCTCGAAT-------------------TAT-----TGAAACCCAATTCGG-GT----CG-----TCTGTCAATGCT-------------------------------------------------------------------------AACTGATGGACTCTACGATTCTCTAATTA-----------------------------------------------------T-CAATTTTAGGAATGCAATACAACGCTGTGTGACTGCAAGGGCATCAAAGGACGCATGGG--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGTGACTGCAAGGGC...................1913.0030010000002
....................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGACTGCAAGGGC...................1711.0010000000001
.................................................................................................................................................................................................................................................................................................................................................................................................CGCTGTGTGACTGCAAGGGT...................2011.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................AATGCAATACAACGCTGTGTGACT...........................2411.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................TACAACGCTGTGTGACTGCAAGGGC...................2511.0010000000100
...............................................................................................................................................................................................................................................................................................................................................................................................AACGCTGTGTGACTGCAAGGGC...................2211.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGTGTGACTGCAAGGGCATC................2411.0010100000000
droPer2
C------------------------------------------------------------------------------------------------------TAATCAG---AGACAATCAAGACTTGTTCTCGAAT-------------------TAT-----TGAAACCCAATTCGG-GT----CG-----TCTGTCAATGCT-------------------------------------------------------------------------AACTGATGGACTCTACGATTCTCTAATTA-----------------------------------------------------T-CAATATTAGGAATGCAATACAACGCTGTGTGACTGCAAGGGCATCAAAGGACGCATGGG--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGTGACTGCAAGGGC...................1917.007601000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACTGCAAGGGCATC................1913.003300000
...........................................................................................................................................................................................................................................................................................................................................................................................ATACAACGCTGTGTGACTGCAAG......................2312.002200000
........................................................................................................................................................................................................................................................................................................................................................................................GCAATACAACGCTGTGTGACT...........................2112.002200000
......................................................................................................................................................................................................................................................................................................................................................................................ATGCAATACAACGCTGTGTGACTGC.........................2512.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGTGACTGCAAGGGCATC................2211.001100000
................................................................................................................................................................................................................................................................................................................................................................................................ACGCTGTGTGACTGCAAGGGCATC................2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................GCAATACAACGCTGTGTGACC...........................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAAGGGCATCAAAGGACGCA......2411.001010000
droAna3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAGGAATGTAACACAACAGTATGTGACTGCAAAGGCATCAAAGGACGACAGGG--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGTGACTGCAAAGGCATCAAAGGAC.........2611.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................AACACAACAGTATGTGACTGCAAAGGC...................2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................................GAATGTAACACAACAGTATGTGACTGC.........................2711.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................ACAACAGTATGTGACTGCAAAGGCATCA...............2811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................ATGTAACACAACAGTATGTGACTGC.........................2511.001010000
...................................................................................................................................................................................................................................................................................................................................................................................GGAATGTAACACAACAGTATGTGACTGC.........................2811.001010000
droBip1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAATGTAACACAACGGTATGTGACTGCAAAGGCATCAAAGGAAAACAGGGAGSizeHit CountTotal NormTotal
No Reads
droKik1
A-----------------------------------------------------------------------------------------A---TGATAGCTCCAATCAG---GGGCAATCAAGACCAGTTCTCGGACCGATTCCT----------------CTACGAAATTCGATTGGTTTC----------------------C--------------------------------------------------------------------AACTCAA-----------------------------CTGAAT--A-----------------------------------CTCCTTC--TTCTGGCAGGTCTGCAACACCACGCTATGTGACTGCAAGGGTATCAAGGGTCGCATCGG--SizeHit CountTotal NormTotal
No Reads
droFic1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCCAGATCTGCAACACAACGCTATGTGATTGCAAGGGAATTAAGGGACGAGTGGG--SizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATATGCAACACTACGCTATGCGACTGCAAGGGCATCAAAGGACGTGTTGG--SizeHit CountTotal NormTotal
No Reads
droRho1
A--------------------------------------------------------------------------------------------------------ATCAG---GGGCAATCAAGACTAGTTCTAT-----T-----------------------TAAAAATTCGATTTGTTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TTGTTCCAGATCTGCAACGAAACGATATGCGACTGCAAGGGCCTTAAGGGATATGTTGG--SizeHit CountTotal NormTotal
No Reads
droBia1
C------------------------------------------------------------------------------------------------------CAATCAG---GGGCAATCAAGACTCGCACA--------CTCCTTGG----------------C-ACATTTTATTAGTTCC--------------------TCG-------------------------------------------------------------------------AACTGAC------------------------GGGAAATGG-----------------------------------CACATTCT-ACTTTGCAGATCTGCAACACGACGGTGTGCGACTGCAAGGGCATCAAGGGACGCCAAGG--SizeHit CountTotal NormTotal
No Reads
droTak1
ACCCAA-A--------------------------------------------------------------------------------------TGAGAGTTCCAATCAG---GGGCAATCAAGACCACTTCTAT-----ATTCCTTGGTATATATTCAGTGGTACAAAATTCTATTAGTTCC--------------------CCC-------------------------------------------------------------------------GACTGACTGGC-------------AAGTATC------------------------------------------AA--TTTTCT-TTATTCCAGATTTGCAATACGACGCTATGCGACTGCAAGGGCATCAAGGGACGCATGGG--SizeHit CountTotal NormTotal
No Reads
droEug1
AAATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-TATGCC-ACATTGCAGATATGTAACACAACGATATGTGACTGCAAGGGCATAAAGGGACGAGCCGG--SizeHit CountTotal NormTotal
No Reads
dm3
A--------------------------------------------------------------------------------------------------------ATCAG---AGGCAATCAAGCCTGGTTCCAT-----ATTCCTTGG-------------------GC--------------TACCGTGTGCTATATAGTT-TATACATATGTACATATATATATA--------------------------------------------------------------------------------------------------------------------------------TACGCT-TGATTTCAGATCTGCAACACAACGCTATGCGACTGCAAAGGAATCAAGGGACGCATGGG--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................TATGCGACTGCAAAGGAATCAAGGGA..........2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAACGCTATGCGACTGCAAAGGAAT.................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAAAGGAATCAAGGGA..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCAACACAACGCTATGCGACTGCA........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGCGACTGCAAAGGAATCAAGG............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTTCAGATCTGCAACACAACGCTAT.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTCAGATCTGCAACACAACGCTATGCGAC............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTGCAACACAACGCTATGCGAC............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACACAACGCTATGCGACT...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGAATCAAGGGACGCATG....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGCGACTGCAAAGGAATC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGCGACTGCAAAGGAATCAAGGG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ACAACGCTATGCGACTGCAAAGGAAT.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTATGCGACTGCAAAGGAATCAAGGG...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAAAGGAATCAAGGGAC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGAATCAAGGGAC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ACGCTATGCGACTGCAAAGGAA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCGACTGCAAAGGAATCAAGG............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................T-----ATTCCTTGG-------------------GC--------------TACCGT..........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACACAACGCTATGCGACTGCAAAGGAA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGCGACTGCAAAGGAATCA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AACGCTATGCGACTGCAAAGGA...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGCGACTGCAAAGGAATCAAGGGAC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAAAGGAATCAAGGGACGC.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCAACACAACGCTATGCGACTGC.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAACGCTATGCGACTGCAAAGGAATCA...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCAACACAACGCTATGCGACT...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AACACAACGCTATGCGACTGCAAAGGAA..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CACAACGCTATGCGACTGCAAAGGAA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CAAAGGAATCAAGGGACGC.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGAATCAAGGGACGC.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CTATGCGACTGCAAAGGAATCAAGGG...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGCGACTGCAAAGGAATCAAGGGA..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................TACATATATATATA--------------------------------------------------------------------------------------------------------------------------------TACGCT-.............................................................20180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCT-TGATTTCAGATCTGCAACACAACGATATGCGACTGCAAAGGAATCAAGGGACGCATGGG--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................GCAACACAACGATATGCGACTGC.........................2314.00400400000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGAATCAAGGGAC.........1913.00300300000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCGACTGCAAAGGAATCAAGGGAC.........2413.00300300000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TCTGCAACACAACGATATG................................1912.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTGCAACACAACGATATG................................1812.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AACACAACGATATGCGACTG..........................2011.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATCAAGGGACGCAT.....2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AGATCTGCAACACAACGATATG................................2211.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CTGCAACACAACGATATGCGACTGC.........................2511.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACACAACGATATGCGACTG..........................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................ACACAACGATATGCGACTC..........................1911.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ACGATATGCGACTGCAAAGGAATC................2411.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAAAGGAATCAAGGGAC.........2211.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TATGCGACTGCAAAGGAATCAAGGGAC.........2711.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCAAAGGAATCAAGGGAC.........1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGCGACTGCAAAGGAATCAAGGGACGC.......2811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AACACAACGATATGCGACTGCAAA......................2411.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATTCT-TGATTTCAGA...................................................1520.50100000010000000000
droSec2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCT-TGATTTCAGATCTGCAACACAACGCTATGCGACTGCAAAGGAATCAAGGGACGCATGGG--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCTGCAACACAACGCTATGCGACTGCAAGGGAATCAAGGGACGCATGGG--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................CGACTGCAAGGGAATCAAGGGACGCA......2611.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCAAGGGAATCAAGGGACGCATGG...2411.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCTATGCGACTGCAAGGGAA..................2011.00100010000000
droEre2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATCTGTAATACAACGATATGCGATTGCAAAGGAATCAAGGGACGTATGGG--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................ATATGCGATTGCAAAGGAATCAAGGGAC.........2811.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGAATCAAGGGAC.........1911.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................ACGATATGCGATTGCAAAG.....................1911.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGCGATTGCAAAGGAATCAAGGGAC.........2611.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................AACGATATGCGATTGCAAAGG....................2111.0010100000

Generated: 05/17/2015 at 04:18 AM