ID:

dvi_10958

 Coordinate:

scaffold_12963:8543943-8544005 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dvir\GJ10166-cds]; exon [dvir_GLEANR_1011:5]; CDS [Dvir\GJ10166-cds]; exon [dvir_GLEANR_1011:4]; intron [Dvir\GJ10166-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------##################################################
ACCACACCCAAGTTCTATTTAACCGGTGAGCCCGGCTACAATGGCAAAAAGTAAGCTATTTCCTTGAATAATATCTGGCGTAACTCTTAACTGTGACATGCCTTCTATTCTAGGGGCGCTCCTGGTGATGTGGGCAGTGTGGGTCTTAAGGGTGACAAGGGTG
**************************************************............((.(((((......(((((...((........)).)))))...))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V047
embryo
 M061
embryo
 SRR060669
160x9_females_carcasses_total
 V116
male body		 SRR060659
Argentina_testes_total
 SRR060665
9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060676
9xArg_ovaries_total
 SRR060687
9_0-2h_embryos_total
 M047
female body
.................TTTAACCGGTGAGCCCGGCTACA........................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..................TTAACCGGTGAGCCCGGCTACAATGGC...................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................AAGGGCGCTCCTGGTGATGTGGGC............................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................CGCTCCTGGTGATGTGGGCAGTGTT...................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGTGTGGGTCTTAAGGGTGACA...... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................GATGTGGGCAGTGTGGGT................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................GTGGGCAGTGTGGGTCTT................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
ACCACACCCAAGTTCTATTTAACCG.......................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................AACCGGTGAGCCCGGCTACAATGGC...................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............CTATTTAACCGGTGAGCCCGG................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
..................TTAACCGGTGAGCCCGGCTAC............................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.............TCTATTTAACCGGTGAGCCCGGCTACAAC......................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TTAAGGGTGACAAGGGAG 18 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................CTAGGGGGGCTCATGGAGA................................... 19 3 10 0.40 4 0 0 0 1 0 0 0 0 0 3
....................AAGAGGTGAGCCCGGCTA............................................................................................................................. 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..................TAAACCGGTGAGCCCAGATA............................................................................................................................. 20 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................TGGTGATGTGGGCGGAGTAG..................... 20 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTGGGTAGTGAGGGCCTT................ 19 3 17 0.06 1 0 0 0 0 0 0 0 0 0 1
.............................GCCCGGCTAGATTGGGAAA................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TGGTGTGGGTTCAAGATAAATTGGCCACTCGGGCCGATGTTACCGTTTTTCATTCGATAAAGGAACTTATTATAGACCGCATTGAGAATTGACACTGTACGGAAGATAAGATCCCCGCGAGGACCACTACACCCGTCACACCCAGAATTCCCACTGTTCCCAC
**************************************************............((.(((((......(((((...((........)).)))))...))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V053
head
 SRR1106729
mixed whole adult body
 M047
female body
 V116
male body		 SRR060674
9x140_ovaries_total
 SRR060683
160_testes_total
 SRR060689
160x9_testes_total
 SRR060687
9_0-2h_embryos_total
 M028
head
 M061
embryo
 V047
embryo
 M027
male body		 SRR060663
160_0-2h_embryos_total
.....................................................TCGATAAAGGACCTTATGA........................................................................................... 19 2 2 4.00 8 5 0 1 2 0 0 0 0 0 0 0 0 0
....................................................CTCGATAAAGGACCTTA.............................................................................................. 17 2 20 1.85 37 0 37 0 0 0 0 0 0 0 0 0 0 0
....................................................CTCGATAAAGGACCTTACTA........................................................................................... 20 3 2 1.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0
...................................................................................................................CGCGAGGACCACTACACCCGT........................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................TCGATAAAGGACCTTATTAG.......................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GATCCCAGCGAGGACAACTAC................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................TCGATAAAGGACCTTATGAG.......................................................................................... 20 3 11 0.82 9 2 0 0 6 0 1 0 0 0 0 0 0 0
.....................................................TCGATAAAGGACCTTATTAGG......................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................CCTTCGATAAAGGACCTTA.............................................................................................. 19 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................CTCGATAAAGGACCTTAT............................................................................................. 18 2 10 0.30 3 0 2 1 0 0 0 0 0 0 0 0 0 0
...................................................ACTCGATAAAGGACCTTA.............................................................................................. 18 2 7 0.29 2 0 0 0 0 0 0 0 0 1 1 0 0 0
............AAGATAATCTGGTCACTCG.................................................................................................................................... 19 3 15 0.27 4 0 0 2 0 0 0 0 0 0 0 2 0 0
....................................................CTCGATAAAGGACCTTATGA........................................................................................... 20 3 12 0.25 3 2 0 0 0 0 1 0 0 0 0 0 0 0
...................................................TTTCGATAAAGGACCTTA.............................................................................................. 18 2 9 0.22 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.................................................TCTCTCGATAAAGGACCTT............................................................................................... 19 3 18 0.11 2 0 0 0 0 0 0 2 0 0 0 0 0 0
....................................................CTCGATAAAGGAACTT............................................................................................... 16 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................CGATAAAGGACCTTACTAG.......................................................................................... 19 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................TCAGTCGGTTAAGGAACTTA.............................................................................................. 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................TCTCGATAAAGGACCTTATT............................................................................................ 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:8543893-8544055 - dvi_10958 ACCACA------CCCAAGTTCTATTTAACCGGTGAGCCC----------------------------------------------GGCTACAATGGCAA---------AAAG--TAAGCTAT----T--TC-----------------------------------------CTT--------------------------GAATAATAT-CTGGC--GTAAC--TC---TTAACTGTGACATGCCT--TC-TATTC--TAGGGGCGCTCCTGGTGA------------TG------------------------------------------TGGGCAGTGTG---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAGGGTG-
droMoj3 scaffold_6500:1156174-1156329 - TCCATA------CCGAAGTTTTACTTAACGGGCGAACCA----------------------------------------------GGTTACAATGGTAA---------AAAG--TAAGTTAT----GTC-------------------------------------------TT------------------CAACTCTTTCAAATATCGATTT-----------------------TAAATGGTAT-----TTTTCTTCAGGGGCGCACGTGGTGA------------TG------------------------------------------TTGGCAGCCCC---------------------------------------------------------------------------------------------------------------------------------------------GGCTTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAAGGTG-
droGri2 scaffold_15252:11738506-11738677 - CCCACA------CCCAAGATATATCTAGCTGGCAGTCCC----------------------------------------------GGCTACAATGGCAA---------GAAG--TGAGTATTCTCCATC-------------------------------------------CT------------------CAATTCTCCAAAACATAC-CCAAC--GAAAA--CA---TTT-----ATTTTTTTCTTCG-T--TTTTTAGGGGTGAACGTGGCGA------------TT------------------------------------------TTGGCAGCGAA---------------------------------------------------------------------------------------------------------------------------------------------GGCTTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAAGGTG-
droWil2 scf2_1100000004585:8345069-8345226 - CAGGTG------CCCAAATTTTATCTTACTGGCGAACAT----------------------------------------------GGTTACAACGGACG---------AAAG--TAAGAACA----GACAT---------------------------------------------------------------ATTTTTCAAAATATTCCATC-----------------------TAATCAATATTTCGTA-ATTCTTAGGGGTGCGCGTGGAGA------------CA------------------------------------------CTGGCCATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGACAAGGGTG-
dp5 4_group4:1553110-1553258 + AAAG---------------------------GAGACAAAGGCTACACCGGACAAGCTGGCACAGATGGTATCCCTGGAGCCCCAGGGCGCG-ATGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATGGTGCTCCCGGTCTCAGCATTAAGGGAGAATCAGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAGGGTAC
droPer2 scaffold_10:557024-557172 + AAAG---------------------------GAGACAAAGGCTACACCGGACAAGCTGGCACAGATGGTATCCCTGGAGCCCCAGGGCGCG-ATGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATGGTGCTCCCGGTCTCAGCATTAAGGGAGAATCAGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAGGGTAC
droAna3 scaffold_12916:13645098-13645286 - CTTACAGCGGCAT-CAAGGGAGA------------TGCT---------G----------------------------------------------GTGA---------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGGCTACCCT-------------------------------------------------------GGACTACAAGGCTACATAGGAGCTCCGGGAGCTAAGGGATTGCGAGGACAGCCTGGTGATTCACCCGAGGCGTTGGAAGGTCCCATCGGTCGCAAGGGAGAGCCGGGAAATCCAGGACGGGAT------------------GGACTTA------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCTACGGTT-
droBip1 scf7180000396535:615572-615741 - CTATCC-----------------------------------------TGGACAACAA----------------------------GGCTACAGAGGAGC---------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGAGCCAAGGGTCTTCGTGGACAACCTGGTGATTCACCCGAGCCCCTGGCAGGTGCCATCGGTCGCAAGGGAGAGCCTGGAAGTCCGGGACAAGATGGTCTTCCTGGTCGGTACGGTCTGA------------------------------------------------------------------------------------------------------------------------------------AGGGTCAACGTGGTG-
droKik1 scf7180000302271:135027-135180 - GCCATC------GGAGA------------------GGTC---------G---------GCCCAAATGGACCCG-------------------ATGGCCTGCAGGGCCAGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGA------------CG------------------------------------------AAGGCTTCCCC---------------------------------------------------------------------------------------------------------------------------------------------GGCTTGATGGGACAG---------------------------------------------AATGGTGACCAGGGACCACAGGGTCCTTTCGGTGAGCAGGGCATTCAAGGTGTTC------------------------AGGGAGACGAAGGTG-
droFic1 scf7180000453842:1212992-1213125 - CCCC--------------------------GGTGCCGTT----------------------------------------------GGCTATCACGGTGC---------CA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCGATAAGGGTGA------------AG------------------------------------------CGGGTCTGATC------------------GGTCTGACAGGACTCAAGGGC------------------------------------------------------------------------------------------------------------------GCC---------------------------------------------GTTGGACCCCAAGGAC---------------------------CTCAAGGCTATGTGGGCGCTC---------------CCGGTGAGAAAGGAG-
droEle1 scf7180000491273:219746-219878 + ACCACG---GGCC-CCAGGGCGA------------GGAC---------G----------------------------------------------GTGT---------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGGCTTCAAT-------------------------------------------------------GGCGAACCGGGTATGAACGGCAATCCC------------------------------------------------------------------------------------------------------------------GGCTACAAGGGTCAA---------------------------------------------CGCGGTGTGCCAGGTCAGGCGGTGC------------------TGGCTGGTGAAA------------------------TCGGCACCCAAGG---
droRho1 scf7180000777055:86117-86216 - AGCACC------CCCAAGATTTACCTGGTCGGCGAGCCC----------------------------------------------GGCTACAACGGCCG---------TA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGAGTGGTGA------------CG------------------------------------------TCGGAGATGTC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGAGAAGGGTC-
droBia1 scf7180000302261:442505-442604 - TCCAAG------CCCAAGATCTACTTGACCGGTGAGCCG----------------------------------------------GGCTTCAATGGACG---------CA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGCGCGGTGA------------CG------------------------------------------ATGGAGACACT---------------------------------------------------------------------------------------------------------------------------------------------GGCTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGTCAAGGGTG-
droTak1 scf7180000415204:138893-139038 + TG-GCG------CCCAAGGTGA-------------ACGT---------G----------------------------------------------GTGA---------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGGCTTCGAA-------------------------------------------------------GGACAGCCGGGCTTCGATGGAGCACCCGGCGTAAAGGGT------------------------------------------------------------------------------------------------------------------TTC---------------------------------------------GCCGGAGATCAAGGAC---------------------------CTCGCGGTGCTCCCGGCTTCACTGAACTGGCGCAGAAGGGCGACGAAGGTG-
droEug1 scf7180000409005:919031-919148 + CGCACT------G---------------------------------------------GCCTTGATGGA------------------CGCG-ATGGACTCGATGGCGAGAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGA------------AC---------------------------------AAGGTCTGCAGGGCATTTGGG---------------------------------------------GC---------------------------------------------------------------------------------------------------------CAG---------------------------------------------CCTGGTGAGAAGGGAT---------------------------CTATCGGAGCCC------------------------AGGGTATTCCCGGTG-
dm3 chr2L:5015549-5015711 - ACGG----------------------------CGAGTTC----------------------------------------------GGAC---------C---------TAAAGGTGAGCGGA----T--ATTTGGACTAAAAATCTAACATATAAAA-AAGAAGCTAC-CACTTTGTCTAATCATGA------------------------TCTAT--AATACCGTATACCTT----------------GC-TATCCTTTA-----------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------GT---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGATGGCTATC------------------------CCGGAGCTAAC-----
droSim2 2l:4828781-4828972 - ACGGCA------G-----------------GGTGACATC---------GGACCTCGTGGACCCAACG----------------------------GCGAGTTCGGACCTAAAGGTGAGCGAA----T--ATTTGGACTAAAAATCTAACATATACAG-AAGA---TGC-GACTTTGCCTAATCATGG------------------------TCTAT--AATACCGTATATCTT----------------CC-TATCCTTTA-----------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------GC---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGATGGCTATC------------------------CCGGAGCTAAC-----
droSec2 scaffold_5:3102891-3102990 - ACCACA------CCCAAGGTCTACTTGATCGGCGAGCCG----------------------------------------------GGATATGACGGAAT---------AA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCGAGCTCGGCGA------------CG------------------------------------------ATGGTGATACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGTCAAGGGTG-
droYak3 2L:10509329-10509478 + ACCG---------------------------------------------------------------------------------GGATATGACGGATT---------GA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGCGCGGTGA------------CT------------------------------------------ATGGTGACACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCAAGGGCGTCAAAGGTGAACCGAATCCGGGTCAGATCTACGACAACACTGGTGAGCCCGGTGAGGATGGTT---------------------------ATGACGGTCTGA------------------------AGGGCGTAAAAGG---
droEre2 scaffold_4929:5094074-5094281 - AAGTT----------------GGATTGACCGGACGGCAGGGGGACATCGGTCCTCGTGGACCCAATG----------------------------GCAGCTTCGGACCTAAAGGTGAGCGGA----T--ATCTGGACTAAATATATTACATATAAAAGAGGT---TGCTCTCTTTGTCTAATCATAGCTTATCAGCTATCCTATAAACCAGTCTATAAAATACGGTA---CCT----------------AC-TATTCTTT-----------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------GGTCTCT------------------------------------------------------------------------------------------------------------------------------------CCGGTGATAATGG---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
ACCACA------CCCAAGTTCTATTTAACCGGTGAGCCC----------------------------------------------GGCTACAATGGCAA---------AAAG--TAAGCTAT----T--TC-----------------------------------------CTT--------------------------GAATAATAT-CTGGC--GTAAC--TC---TTAACTGTGACATGCCT--TC-TATTC--TAGGGGCGCTCCTGGTGA------------TG------------------------------------------TGGGCAGTGTG---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAGGGTG-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................TTTAACCGGTGAGCCC----------------------------------------------GGCTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
........................TTAACCGGTGAGCCC----------------------------------------------GGCTACAATGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CGCTCCTGGTGA------------TG------------------------------------------TGGGCAGTGTT---------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................AGTGTG---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACA.......2211.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................GA------------TG------------------------------------------TGGGCAGTGTG---------------------------------------------------------------------------------------------------------------------------------------------GGT........................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................G------------------------------------------TGGGCAGTGTG---------------------------------------------------------------------------------------------------------------------------------------------GGTCTT.....................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
ACCACA------CCCAAGTTCTATTTAACCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
..........................AACCGGTGAGCCC----------------------------------------------GGCTACAATGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
....................CTATTTAACCGGTGAGCCC----------------------------------------------GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
........................TTAACCGGTGAGCCC----------------------------------------------GGCTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...................TCTATTTAACCGGTGAGCCC----------------------------------------------GGCTACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TCCATA------CCGAAGTTTTACTTAACGGGCGAACCA----------------------------------------------GGTTACAATGGTAA---------AAAG--TAAGTTAT----GTC-------------------------------------------TT------------------CAACTCTTTCAAATATCGATTT-----------------------TAAATGGTAT-----TTTTCTTCAGGGGCGCACGTGGTGA------------TG------------------------------------------TTGGCAGCCCC---------------------------------------------------------------------------------------------------------------------------------------------GGCTTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAAGGTG-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................ACTTAACGGGCGAACCA----------------------------------------------GGTTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
CCCACA------CCCAAGATATATCTAGCTGGCAGTCCC----------------------------------------------GGCTACAATGGCAA---------GAAG--TGAGTATTCTCCATC-------------------------------------------CT------------------CAATTCTCCAAAACATAC-CCAAC--GAAAA--CA---TTT-----ATTTTTTTCTTCG-T--TTTTTAGGGGTGAACGTGGCGA------------TT------------------------------------------TTGGCAGCGAA---------------------------------------------------------------------------------------------------------------------------------------------GGCTTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAAGGTG-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................GCGAA---------------------------------------------------------------------------------------------------------------------------------------------GGCTTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACA.......2111.00101
...........................GCTGGCAGTCCC----------------------------------------------GGCTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...................................................................................................................................................................................................................................................................................................................................................GCGAA---------------------------------------------------------------------------------------------------------------------------------------------GGCTTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTG..........1811.00110
droWil2
CAGGTG------CCCAAATTTTATCTTACTGGCGAACAT----------------------------------------------GGTTACAACGGACG---------AAAG--TAAGAACA----GACAT---------------------------------------------------------------ATTTTTCAAAATATTCCATC-----------------------TAATCAATATTTCGTA-ATTCTTAGGGGTGCGCGTGGAGA------------CA------------------------------------------CTGGCCATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGACAAGGGTG-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................AT----------------------------------------------GGTTACAACGGACG---------AAAG--GGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200020
.................................................................................................................................................................................................................................................................................................CA------------------------------------------CTGGCCATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------AGGGC...........2512.00200020
.............................................................................................................................................................................................................................................................................................................................................CTGGCCATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------AGGGC...........2311.00100010
................................................................................................................................................................................................................................................................................................................................................GCCATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------AGGGC...........2011.00100010
...................................ACAT----------------------------------------------GGTTACAACGGACG---------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
........................CTTACTGGCGAACAT----------------------------------------------GGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................................................................................................................................................TTCTTAGGGGTGCGCGTGGAG............................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................GGCCATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------AGGGC...........2111.00100010
..................................................................................................................................................................................................................................................................................................................................................CATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGACAAGG....2511.00100010
...............................................................................................................................................................................................................................................................................TGGAGA------------CA------------------------------------------CTGGCCATAAA---------------------------------------------------------------------------------------------------------------------------------------------GGATTCA------------------------------------------------------------------------------------------------------------------------------------................2611.00101000
...................................ACAT----------------------------------------------GGTTACAACGGACG---------AAAG--G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......................................................................................GTTACAACGGACG---------AAAG--GGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20100010
dp5
AAAG---------------------------GAGACAAAGGCTACACCGGACAAGCTGGCACAGATGGTATCCCTGGAGCCCCAGGGCGCG-ATGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATGGTGCTCCCGGTCTCAGCATTAAGGGAGAATCAGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAGGGTACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................GCCCCAGGGCGCG-ATGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATGGT........................................................................................................................................................................................................................................................................................................................................................2712.0020010100000
..........................................................................................................................................................................................................................................................................................................................AAGGGAGAATCAGGCAGTCGCGGCA.............................................................................................................................................................................................................................................................................................................2511.0010000010000
..............................................................................................................................................................................................................................................................................................................................GAGAATCAGGCAGTCGCGGC..............................................................................................................................................................................................................................................................................................................2011.0010000000001
..................................................................................................................................................................................................................................................................................................GATGGTGCTCCCGGTCTC............................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.......................................................................................................................................................................................................................................................................................................................ATTAAGGGAGAATCAGGCAGTCGC.................................................................................................................................................................................................................................................................................................................2411.0010000000001
...............................................................................CCCCAGGGCGCG-ATGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
....................................................................................................................................................................................................................................................................................................................................CAGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTT.....................................................................................................................................................2611.0010100000000
droPer2
AAAG---------------------------GAGACAAAGGCTACACCGGACAAGCTGGCACAGATGGTATCCCTGGAGCCCCAGGGCGCG-ATGGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATGGTGCTCCCGGTCTCAGCATTAAGGGAGAATCAGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAGGGTACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................ACACCGGACAAGCTGGCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
...............................................................................................................................................................................................................................................................................................................................................GGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGA.........2312.002200000
..........................................TACACCGGACAAGCTGGCACAGATGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
..................................................................................................................................................................................................................................................................................................................................ATCAGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................2211.001100000
..........................................................GCACAGATGGTATCCCTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................CCGGACAAGCTGGCACAGATGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................AATCAGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGT........................................................................................................................................................2611.001100000
......................................................................................................................................................................................................................................................................................................................................GGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------G..........................................................................................................................................................1911.001001000
..........................................................................................................................................................................................................................................................................................................................................GTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCT......................................................................................................................................................1911.001100000
...................................................CAAGCTGGCACAGATGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
................................................................ATGGTATCCCTGGAGCCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------------------------------------------------------------------------------------------------------------------------------AGGGTGACAAGGGTAC1811.001000001
................................................................................................................................................................................................................................................................................................................................GAATCAGGCAGTCGCGGCATG...........................................................................................................................................................................................................................................................................................................2111.001100000
..........................................TACACCGGACAAGCTGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...............................................................................................................................................................................................................................................................................................................................................GGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGG.........2311.001100000
..................................................................................................................................................................................................................................................................................................................................ATCAGGCAGTCGCGGCATG...........................................................................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................................................................................................................GCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------GGTCTTA------------------------------------------------------------------------------------------------------------------------------------AGGGTGAC........2311.001100000
.....................................................................................................................................................................................................................................................................................................................................AGGCAGTCGCGGCATGGAC---------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................1911.001100000
droAna3
CTTACAGCGGCAT-CAAGGGAGA------------TGCT---------G----------------------------------------------GTGA---------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGGCTACCCT-------------------------------------------------------GGACTACAAGGCTACATAGGAGCTCCGGGAGCTAAGGGATTGCGAGGACAGCCTGGTGATTCACCCGAGGCGTTGGAAGGTCCCATCGGTCGCAAGGGAGAGCCGGGAAATCCAGGACGGGAT------------------GGACTTA------------------------------------------------------------------------------------------------------------------------------------ATGGTCGCTACGGTT-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................GATTGCGAGGACAGCCTGGT...............................................................................................................................................................................................................................................2012.002020000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTGATTCACCCGAGGCGTTGG............................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGTTGGAAGGTCCCATCG................................................................................................................................................................................................................2011.001000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCCGGGAAATCCAGGACGGGAT------------------GGA........................................................................................................................................................2811.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCATCGGTCGCAAGGGAGAGC.................................................................................................................................................................................................2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................TGATTCACCCGAGGCGTTGGAAGGTCC.....................................................................................................................................................................................................................2711.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCATCGGTCGCAAGGGAGAGC.................................................................................................................................................................................................2311.001010000
.TTACAGCGGCAT-CAAGGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................GGAGCTCCGGGAGCTAAGGGATTGCGAG..........................................................................................................................................................................................................................................................2811.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................CTAAGGGATTGCGAGGACAGCCT..................................................................................................................................................................................................................................................2311.001010000
............................................................................................................................................................................................................................................................................................................................................................................................GGATTGCGAGGACAGCCTGGTGAT............................................................................................................................................................................................................................................2411.001010000
...........AT-CAAGGGAGA------------TGCT---------G----------------------------------------------GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGATTCACCCGAGGC.................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGTGATTCACCCGAGGC.................................................................................................................................................................................................................................2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTGCGAGGACAGCCTGGT...............................................................................................................................................................................................................................................1911.001001000
......................................................................................................................................................................................................................................................................................................................................................................................GCTAAGGGATTGCGAGGACAGCC...................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................................................................................................................................................................................................................................GCTCCGGGAGCTAAGGGATTGC.............................................................................................................................................................................................................................................................2211.001010000
droBip1
CTATCC-----------------------------------------TGGACAACAA----------------------------GGCTACAGAGGAGC---------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGGAGCCAAGGGTCTTCGTGGACAACCTGGTGATTCACCCGAGCCCCTGGCAGGTGCCATCGGTCGCAAGGGAGAGCCTGGAAGTCCGGGACAAGATGGTCTTCCTGGTCGGTACGGTCTGA------------------------------------------------------------------------------------------------------------------------------------AGGGTCAACGTGGTG-SizeHit CountTotal NormTotal
No Reads
droKik1
GCCATC------GGAGA------------------GGTC---------G---------GCCCAAATGGACCCG-------------------ATGGCCTGCAGGGCCAGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGA------------CG------------------------------------------AAGGCTTCCCC---------------------------------------------------------------------------------------------------------------------------------------------GGCTTGATGGGACAG---------------------------------------------AATGGTGACCAGGGACCACAGGGTCCTTTCGGTGAGCAGGGCATTCAAGGTGTTC------------------------AGGGAGACGAAGGTG-SizeHit CountTotal NormTotal
No Reads
droFic1
CCCC--------------------------GGTGCCGTT----------------------------------------------GGCTATCACGGTGC---------CA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCGATAAGGGTGA------------AG------------------------------------------CGGGTCTGATC------------------GGTCTGACAGGACTCAAGGGC------------------------------------------------------------------------------------------------------------------GCC---------------------------------------------GTTGGACCCCAAGGAC---------------------------CTCAAGGCTATGTGGGCGCTC---------------CCGGTGAGAAAGGAG-SizeHit CountTotal NormTotal
No Reads
droEle1
ACCACG---GGCC-CCAGGGCGA------------GGAC---------G----------------------------------------------GTGT---------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGGCTTCAAT-------------------------------------------------------GGCGAACCGGGTATGAACGGCAATCCC------------------------------------------------------------------------------------------------------------------GGCTACAAGGGTCAA---------------------------------------------CGCGGTGTGCCAGGTCAGGCGGTGC------------------TGGCTGGTGAAA------------------------TCGGCACCCAAGG---SizeHit CountTotal NormTotal
No Reads
droRho1
AGCACC------CCCAAGATTTACCTGGTCGGCGAGCCC----------------------------------------------GGCTACAACGGCCG---------TA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGAGTGGTGA------------CG------------------------------------------TCGGAGATGTC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGAGAAGGGTC-SizeHit CountTotal NormTotal
No Reads
droBia1
TCCAAG------CCCAAGATCTACTTGACCGGTGAGCCG----------------------------------------------GGCTTCAATGGACG---------CA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGCGCGGTGA------------CG------------------------------------------ATGGAGACACT---------------------------------------------------------------------------------------------------------------------------------------------GGCTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGTCAAGGGTG-SizeHit CountTotal NormTotal
No Reads
droTak1
TG-GCG------CCCAAGGTGA-------------ACGT---------G----------------------------------------------GTGA---------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGGCTTCGAA-------------------------------------------------------GGACAGCCGGGCTTCGATGGAGCACCCGGCGTAAAGGGT------------------------------------------------------------------------------------------------------------------TTC---------------------------------------------GCCGGAGATCAAGGAC---------------------------CTCGCGGTGCTCCCGGCTTCACTGAACTGGCGCAGAAGGGCGACGAAGGTG-SizeHit CountTotal NormTotal
No Reads
droEug1
CGCACT------G---------------------------------------------GCCTTGATGGA------------------CGCG-ATGGACTCGATGGCGAGAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGA------------AC---------------------------------AAGGTCTGCAGGGCATTTGGG---------------------------------------------GC---------------------------------------------------------------------------------------------------------CAG---------------------------------------------CCTGGTGAGAAGGGAT---------------------------CTATCGGAGCCC------------------------AGGGTATTCCCGGTG-SizeHit CountTotal NormTotal
No Reads
dm3
ACGG----------------------------CGAGTTC----------------------------------------------GGAC---------C---------TAAAGGTGAGCGGA----T--ATTTGGACTAAAAATCTAACATATAAAA-AAGAAGCTAC-CACTTTGTCTAATCATGA------------------------TCTAT--AATACCGTATACCTT----------------GC-TATCCTTTA-----------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------GT---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGATGGCTATC------------------------CCGGAGCTAAC-----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CG..................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------....................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------------------------------------------------------------------------------GT---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------C...................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATGATGGAC---------------------------CGGATG..............................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAC---------------------------CGGATGGCTATC------------------------CCG.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC---------------------------------------------TCTGGTGATGATGGA................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................T--ATTTGGACTAAAAATCTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGGAC---------------------------CGGATGGCTAT.........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGGAC---------------------------CGGATGGCT...........................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGGAC---------------------------CGGATGGCTA..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGGAC---------------------------CGGATGGCT...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------TCTGGTGATGATGGAC---------------------------CGG.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TAAAGGTGAGCGGA----T--ATTTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGATGG.............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGATGGAC---------------------------CGGATGGCTA..........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGATGATGGAC---------------------------CGGAT...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TAAAGGTGAGCGGA----T--ATTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGGAC---------------------------CGGATGGCTAT.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------C...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGATGGAC---------------------------CGGATGGCT...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................T--ATTTGGACTAAAAATCTAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGAT...............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGATGGAC---------------------------CGGATGGCTATC------------------------................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGGAC---------------------------CGGATGGCT...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTTC----------------------------------------------GGAC---------C---------TAAAGGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1961.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---------------------------------------------TCTGGTGATGATGGAC---------------------------....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATGATGGAC---------------------------CGGAT...............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGGAC---------------------------CGGATGGCTATT------------------------................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..GG----------------------------CGAGTTC----------------------------------------------GGAC---------C---------TAAAGGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGAC---------------------------CGGATGGCTATC------------------------C...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GTGAGCGGA----T--ATTTGGACTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGATGGAC---------------------------CGGAT...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGGAC---------------------------CGGATGGCTATC------------------------C...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGATGATGGAC---------------------------CGGATGGCTATC------------------------C...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGATGGCTAT.........................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC---------------------------------------------TCTGGTGATGATGGAC---------------------------C...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGGAC---------------------------CGGATGGCTATC------------------------CCGGA...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACGGCA------G-----------------GGTGACATC---------GGACCTCGTGGACCCAACG----------------------------GCGAGTTCGGACCTAAAGGTGAGCGAA----T--ATTTGGACTAAAAATCTAACATATACAG-AAGA---TGC-GACTTTGCCTAATCATGG------------------------TCTAT--AATACCGTATATCTT----------------CC-TATCCTTTA-----------------------------------------------------------------------------------G---------------------------------------------------------------------------------------------------------------------------GC---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGATGGCTATC------------------------CCGGAGCTAAC-----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................CCCAACG----------------------------GCGAGTTCGGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00400400000000000000
................................................................ACG----------------------------GCGAGTTCGGACCTAAAGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGATGATGGAC---------------------------CGGATGGCT...........................................2412.00200200000000000000
......................................C---------GGACCTCGTGGACCCAACG----------------------------GCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
.................................GACATC---------GGACCTCGTGGACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGGAC---------------------------CGGATGGCTATC------------------------C...............2311.00100100000000000000
......................................................CGTGGACCCAACG----------------------------GCGAGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.....................................................TCGTGGACCCAACG----------------------------GCGAGTTCGGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAC---------------------------CGGATGGCTATC------------------------CC..............2111.00100000000000100000
.............................................................CCAACG----------------------------GCGAGTTCGGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
............................................................CCCAACG----------------------------GCGAGTTCGGACCTAAAGGCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGAT...............................................2611.00100100000000000000
..............................GGTGACATC---------GGACCTCGTGGACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGA................................................2511.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------C...................................................2211.00100100000000000000
...............................................................AACG----------------------------GCGAGTTCGGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTC---------------------------------------------TCTGGTGATGATGGA................................................................................1811.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------------------------------------------------------------------------------GC---------------------------CTC---------------------------------------------TCTGGTGATGATGGAC---------------------------CGGAT...............................................2711.00100100000000000000
......................................................CGTGGACCCAACG----------------------------GCGAGTTCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
...................................CATC---------GGACCTCGTGGACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGGAC---------------------------CGGATGGCT...........................................1911.00100000000000100000
.........................................................GGACCCAACG----------------------------GCGAGTTCGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
............G-----------------GGTGACATC---------GGACCTCGTGGACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
....................................ATC---------GGACCTCGTGGACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
droSec2
ACCACA------CCCAAGGTCTACTTGATCGGCGAGCCG----------------------------------------------GGATATGACGGAAT---------AA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGCGAGCTCGGCGA------------CG------------------------------------------ATGGTGATACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGTCAAGGGTG-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................GGATATGACGGAAT---------AA-------------------------------------------------------------------------------------------------------------------------------------------------------AGG........................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..................................................................................................................................................................................................................................................................................................G------------------------------------------ATGGTGATACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGT.........2611.0010010
.............................................................................................................................................................................................................................................................................................................................................ATGGTGATACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCG..........2411.0010010
................AGGTCTACTTGATCGGCGAGCCG----------------------------------------------GGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
....................CTACTTGATCGGCGAGCCG----------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................G----------------------------------------------GGATATGACGGAAT---------AA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGC......................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
....................................................................................................................................................................................................................................................................................................................................................TACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCA------------------------------------------------------------------------------------------------------------------------------------AGGGCGTCAAGGG...2411.0010010
droYak3
ACCG---------------------------------------------------------------------------------GGATATGACGGATT---------GA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGCGCGGTGA------------CT------------------------------------------ATGGTGACACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCAAGGGCGTCAAAGGTGAACCGAATCCGGGTCAGATCTACGACAACACTGGTGAGCCCGGTGAGGATGGTT---------------------------ATGACGGTCTGA------------------------AGGGCGTAAAAGG---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCGTCAAAGGTGAACC.................................................................................................................................1913.00330000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGAGCCCGGTGAGGATGG.................................................................................2211.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGGGCGTCAAAGGTGA....................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------ATGACGGTCTGA------------------------AGGGC...........1811.00100100000000
......................................................................................GATATGACGGATT---------GA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGC..................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCGTCAAAGGTGAACC.................................................................................................................................2111.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAGCCCGGTGAGGATGGT................................................................................2111.00100010000000
.........................................................................................ATGACGGATT---------GA-------------------------------------------------------------------------------------------------------------------------------------------------------AGGGAGAGCGC................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTGAGCCCGGTGAGGATGGT................................................................................2411.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT---------------------------ATGACGGTCTGA------------------------AGGGC...........2011.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGAGCCCGGTGAGGATGGTT---------------------------ATGAC...............................................2911.00100000010000
.........................................................................................................................................................................................................................................................................AGAGCGCGGTGA------------CT------------------------------------------ATGGTGA............................................................................................................................................................................................................................................................................................................2111.00100010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAACACTGGTGAGCCC............................................................................................2111.00100010000000
................................................................................................................................................................................................................................................................................................................................................GTGACACC---------------------------------------------------------------------------------------------------------------------------------------------GGTTTCAAGGGC...............................................................................................................................................2011.00100010000000
droEre2
AAGTT----------------GGATTGACCGGACGGCAGGGGGACATCGGTCCTCGTGGACCCAATG----------------------------GCAGCTTCGGACCTAAAGGTGAGCGGA----T--ATCTGGACTAAATATATTACATATAAAAGAGGT---TGCTCTCTTTGTCTAATCATAGCTTATCAGCTATCCTATAAACCAGTCTATAAAATACGGTA---CCT----------------AC-TATTCTTT-----------------------------------------------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------------GGTCTCT------------------------------------------------------------------------------------------------------------------------------------CCGGTGATAATGG---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..GTT----------------GGATTGACCGGACGGCAGGGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020001010
.........................................................GGACCCAATG----------------------------GCAGCTTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.......................................................GTGGACCCAATG----------------------------GCAGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...................................................CCTCGTGGACCCAATG----------------------------GCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
..................................................................G----------------------------GCAGCTTCGGACCTAAAGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
......................GATTGACCGGACGGCAGGGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.......................ATTGACCGGACGGCAGGGGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
...................................................CCTCGTGGACCCAATG----------------------------GCAGCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
..GTT----------------GGATTGACCGGACGGCAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
.AGTT----------------GGATTGACCGGACGGCAGGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..................................................................G----------------------------GCAGCTTCGGACCTAAAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010

Generated: 05/17/2015 at 04:18 AM