ID:

dvi_10935

 Coordinate:

scaffold_12963:8454914-8455064 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.7 -6.1 -5.9

Flybase annnotation

exon [dvir_GLEANR_1821:2]; CDS [Dvir\GJ17215-cds]; intron [Dvir\GJ17215-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTGTGACTGCATAAATAAGTTTTGCTCCGTTTTAACACACTTTAATTATTGCAATTAATGCATTTTCAGCCATTACATAATACCTATTCGAAATAATGGCGTTACCCGAGGGTTTGGCTAGCAAAATGAAGACTTTCCAGGCATGTTAAGCAATTATATTTTGTATATTTAAACAGTTGATTGACATCAATTTCAACAGGCTCACAATGATCTGCCCGTGTTCCTTAAGGGCGGACCCCCCGACAAGAT
***************************************************************************************************.......((.((((((((..............))))))))..)).*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060667
160_females_carcasses_total
 M047
female body
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060664
9_males_carcasses_total
 M027
male body		 V116
male body		 V053
head
 SRR1106729
mixed whole adult body
 M028
head
 SRR060676
9xArg_ovaries_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
................................................................................................................................................................................................................ATGATCTGCCCGTGTTCCT........................ 19 0 1 11.00 11 1 3 1 2 1 0 1 0 0 0 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................CTGCCCGTGTTCCTTAAGGGC................. 21 0 1 9.00 9 4 0 2 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGAC..... 20 0 1 7.00 7 1 0 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TAAGGGCGGACCCCCCGACA.... 20 0 1 6.00 6 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACA.... 21 0 1 4.00 4 0 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAATGATCTGCCCGTGTTCC......................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACAAGA. 24 0 1 4.00 4 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATGATCTGCCCGTGTTCC......................... 18 0 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GGCGTTACCCGAGGGTTTGGCT.................................................................................................................................. 22 0 1 3.00 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AATGATCTGCCCGTGTTCC......................... 19 0 1 3.00 3 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0
..................................................................................TACCTATTCGAAATAATGGCGTTACC............................................................................................................................................... 26 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TCGAAATAATGGCGTTACC............................................................................................................................................... 19 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................CCAGGCTCACAATGATCTGCCC................................ 22 1 1 2.00 2 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGGCTCACAATGATCTGCCCGTGTTCC......................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATTCGAAATAATGGCGTTACCCG............................................................................................................................................. 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATTCGAAATAATGGCGTTACCC.............................................................................................................................................. 22 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGGCTCACAATGATCTGCCCGTGT............................ 25 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AGGGTTTGGCTAGCAAAATG......................................................................................................................... 20 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCCAGGCTCACAATGATCTGCCCGTG............................. 27 3 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AAGGGCGGACCCCCCGACAAG.. 21 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................TAATGGCGTTACCCGAGGGTTTGGCT.................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AGGGTTTGGCTAGCAAAATGA........................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GGCTCACAATGATCTGCCCGTGT............................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGTTCCTTAAGGGCGGACCCCC......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TAAGGGCGGACCCCCCGACAAG.. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................TATTCGAAATAATGGCGTTAC................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCCCGTGTTCCTTAAGGGCGG............... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TCACAATGATCTGCCCGTGTTCCT........................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ACAATGATCTGCCCGTGTTC.......................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................TTTAACACACTTTAATTATTGCAATTAA............................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................AAGGGCGGACCCCCCGACAA... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATGATCTACCCGTGTTCCT........................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATTCGAAATAATGGCGTTACCCGAGGGT........................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CCCGAGGGTTTGGCTAGTA.............................................................................................................................. 19 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATGATCTGCCCGTGTTCCTTA...................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TCCTTAAGGGCGGACCCCCCGACA.... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CTATTCGAAATAATGGCG.................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................ATACCTATTCGAAATAATGGCGTTACCC.............................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................AAGGCCATTACATAATACCTATT................................................................................................................................................................. 23 3 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCCGGGTTCCTTAAGGGCGGA.............. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCCAGGCTCACAATGATCTGCCC................................ 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGAGGGTTTGGCTAGCAAAATGAAGACT................................................................................................................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................CTTAAGGGCGGACCCCCCGACA.... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GAAATAATGGCGTTACCCG............................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGGCTCACAATGATCTGCCC................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TTCGAAATAATGGCGTTACCC.............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAATAATGGCGTTACCCGAGGG......................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGGCTCACAATGATCTGCCCGT.............................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTAAGGGCGGACCCCACGACAAGA. 24 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGGCTCACAATGATCTGCCCGTGTTC.......................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................GGCGTTACCCGAGGGTTTGGC................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................GAAATAATGGCGTTACCC.............................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................TACCCGAGGGTTTGGCTAGCA.............................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TATTCGAAATAATGGCATTACC............................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................AGCAAAATGAAGACTTTCCAGGCTC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................GCAAAATGAAGACTTTCCAGGCTC......................................................................................................... 24 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CTTAAGGGCGGACCCCCCGAC..... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................TGGCGTTACCCGAGGGTTTGGCTA................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CCTTAAGGGCGGACCCCCCGAC..... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................TATTCGAAATAATGGCGTTACCC.............................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAATGAAGACTTTCCAGGC........................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................GGCGTTACCCGAGGGTTTG..................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AATACCTATTCGAAATAATGGC..................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGAGGGTTTGGCTAGCAAAAT.......................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................ATTACATAATACCTATTCGA.............................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................AATGGCGTTACCCGAGGGTT....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGGCTCACAATGATCTGCCCG............................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAATGAAGACTTTCCAGGCTCA........................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CACAATGATCTGCCCGTGTTC.......................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................CCTATTCGAAATAATGGCGTTACCC.............................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAATGATCTGCCCGTGTTCCTTAA..................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ACCCGAGGGTTTGGCTAGCA.............................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................CATAATACCTATTCGAAATAATGTC..................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................AAATAATGGCGTTACCCGA............................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAATGATCTGCCCGTGTTCCT........................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTTCCAGGCTCACAATGATCTGCCCGTG............................. 28 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGAGGGTTTGGCTAGCAAAATG......................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................GAGGGTTTGGCTAGCAAAATG......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ATAATACCTATTCGAAATAATG....................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGAGGGTTTGGCTAGCAA............................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................AATGGCGTTACCCGAGGGTTTGGCT.................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................TCGAAATAATGGCGTTAC................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACAAG.. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACAA... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCCCGTGTTCCTTAAGGGC................. 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................AATACCTATTCGAAATAATGGCGTTA................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TAAGGGCGGACCCCCCGACAAGA. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGGCTCACAATGATCTGCCCGTGT............................ 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AATGATCTCCCCGTGTTCC......................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CTATTCGAAATAATGGCGTTACCC.............................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCG....... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CGAGGGTTTGGCTAGCAAAA........................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TTACCCGAGGGTTTGGCTAGCAAAATGA........................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CACAATGATCTGCCCGTGTTT.......................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TAAGGCCATTACATAATACC..................................................................................................................................................................... 20 3 5 0.40 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................ATGAAGACTTTCCAGGCTCC........................................................................................................ 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................AGGGGTCGGCTATCAAAATG......................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................GGCATGTTAAGCAATTTAA........................................................................................... 19 2 11 0.09 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................TTTGTATATTCAAACAGGT....................................................................... 19 2 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................GGCATGTTAAGCAATTTA............................................................................................ 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................................................................................CATGAAGACGTTCCGGGC........................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCCAGGCTCACAATGATC..................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TACAGCCATGACAGAATAC...................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TTAACACTGACGTATTTATTCAAAACGAGGCAAAATTGTGTGAAATTAATAACGTTAATTACGTAAAAGTCGGTAATGTATTATGGATAAGCTTTATTACCGCAATGGGCTCCCAAACCGATCGTTTTACTTCTGAAAGGTCCGTACAATTCGTTAATATAAAACATATAAATTTGTCAACTAACTGTAGTTAAAGTTGTCCGAGTGTTACTAGACGGGCACAAGGAATTCCCGCCTGGGGGGCTGTTCTA
***********************************************************************************************************.......((.((((((((..............))))))))..)).*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060665
9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060657
140_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060677
Argx9_ovaries_total
 V053
head
..................................................................................................................................................................................................................................AATTCCCGCCTGGGGGGCTGT.... 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................ACTAGACGGGCACAACGAAT...................... 20 1 1 1.00 1 0 1 0 0 0 0
....................CAAAACAAGTCAAAATTGTGAG................................................................................................................................................................................................................. 22 3 9 0.22 2 0 0 0 1 1 0
.........................................................................................................AGGGCTCCCAATCTGATCG............................................................................................................................... 19 3 8 0.13 1 0 0 1 0 0 0
..........................................................................................................................CGTTTTACTCCTTAAAGGCC............................................................................................................. 20 3 12 0.08 1 0 0 0 0 0 1
...................................................................................................................................................................................................................................ATTCCTGCCTGGGGGAGT...... 18 3 15 0.07 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:8454864-8455114 + dvi_10935 AATTGTGACTGCATA--AA-TAAGTTTTGC-TC--CGTTTTAAC----ACAC-TTTAATTAT--------TGCAATTAAT-----------GCATTTTCAGCC-ATTACATAATACCTATTC--GAAATAATGGCGTTACCCGAGGGTTTGGCTAGCAAAATGAAGACTTTCCAGGCATGTTAA----G-C---A--A-T-----------------T-ATATTTTGT---------------ATATTTAAA----------CAGTTGATTGACATC--------------AATTTCAACAGGCTCACAATGATCTGCCCGTGTTCCTTAAGGGCGGACCCCCCGACAAGAT
droMoj3 scaffold_6500:1064648-1064890 + AATTGTGAAAA--TTCAT-------TTTCCTTC--TACTTTATT----TCAC-TTATATTAT--------TATTCTTAAT-----------GGATTTTCAGCAAATTACATAATACTCATCA--GAAATAATGGCGTTACCCGAAGGTTTGGCTGGCAAAATGAAGACTTTCCAGGCAGTTTAA----A-C---A--T---------------------ATATTTTAAGTATCTTC--------------------------TTTTAGTTAACA-AC--------------ATTTCTTGCAGGCTGTCAATGATTTGCCTGTGTTCCTTAAGGGCGGACCCGCCGATAAGGC
droGri2 scaffold_15252:11636695-11636856 + AATTGTGAGAA--CTTATAGTTGGTCTTG------GACTTTGTTTGGCACTCGTTTAAATTT--------TGCACTTAAT-----------GTATTTGCAGCA-ATTACATAACAACAATTA--TCAACTATGGCGTTACCTGAGGGACTAGCTGGCAAAATGAAGACTTTCCAGGCATGTTAT----A-A---A--A-T-----------------T-AT-----------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004521:2089674-2089883 + TAATT-------------------------------------------------------TT--------TATTTTTTGT-----------GAACATTTAGCA-ATTACATAACTGACAATTGGAAAATTATGGCGCTACCTGAGGGACTGTCAAACAAAATGAAGACTTTCCAAGTGAGTTTA----T---------T------------------T-AAAATACACGTAA----------------------------------TGATAATT-ATATTTTCATGGGTCCTTTTTTTCCAGGCCGTCAATGATTTACCTGTTTTTCTAAAAGGTGGTCCAGCGGATAAGAT
dp5 4_group3:4238969-4239153 + ATT---------------------------------------------------------------------------------------------TTCAGCA--TTACATAACAGATCATT--AAGACCATGGCGCTGCCCGAGGGATTGTCTAACAAAATGAAGGTCTTCCAGGTGAGTTAT----C-C---A--TT------------------C-ATATTTCAAGTAAATCA--------------------------CATTTGATAAGC-AT--------------AGTTTCTTTAGGCTGTCAACGATGTGCCAGTTTTCCTGAAAGGTGGCCCCATAGACAAGGC
droPer2 scaffold_1:5721820-5722004 + ATT---------------------------------------------------------------------------------------------TTCAGCA--TTACATAACAGATCATA--AAGACCATGGCGCTGCCCGAGGGATTGTCTAACAAAATGAAAGTCTTCCAGGTGAGTTAT----C-C---A--TT------------------C-ATATTTCAAGTAAATCA--------------------------CATTTGATAAGC-AT--------------AGTTTCTTTAGGCTGTCAACGATGTGCCAGTTTTCCTGAAAGGTGGCCCCATAGACAAGGC
droAna3 scaffold_12916:6274831-6275034 + ATTTT---------------------------------------------------------------------------AATTGCTTTAACTAATTGCAGCA-ATTACATAACAAATCTAA--ACGATTATGGCGCTGCCCGAGGGACTGTCCAACAAAATGAAGGTTTTCCAGGTAAGTTTG----T-C---A--G-A----------------TTTATATTT-AAAAAAA-TC--------------------------TATTAATTAATA-AT--------------ATGTTTCAAAGGCCGTCAATGAACTGCCAGTTTTCCTGAAAGGTGGACCCGCTGACAAGAT
droBip1 scf7180000396568:542251-542454 - ATTTT---------------------------------------------------------------------------AATTGCTTTAACTAATTGCAGCA-ATTACATAACAAATCTAA--ACGATTATGGCGCTGCCCGAGGGACTGTCCAACAAAATGAAGGTTTTCCAGGTAAGTTTG----T-C---A--G-T----------------TC-ATTCTTTAAAAAAA-TA--------------------------TATAAAATAATA-TT--------------TTATTTTTAAGGCCGTCAACGAACTGCCAGTTTTCCTGAAAGGTGGACCCGCCGACAAGAT
droKik1 scf7180000302408:446194-446410 - ACATTTT-------------CAAGT----T-TT-------------------------------------------TTGC-AATGGTTTA-ATATTTTCAGAA-GTTACATAAGAG---CAA--GCAGATATGGCGCTGCCCGAGGGTTTGTCCAACAAAATGAAGGTTTTCCAGGTGAGTTTC----G-TTACCCCT------TGGTTTTTTATATGA-TT--------------------------CTTTAACAGTTA-----------TG---T--------------ATGCTTTTTAGGCTGTCAACGAGCTGCCCGTTTTCCTGAAAGGTGGGCCTGCGGACAAAAT
droFic1 scf7180000453924:74557-74740 - ATA---------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAAATCTAA--GCGA-AATGGCTCTACCCGATGGACTCTCTAATAAAATGAAGGTTTTCCAGGTTAGTTGG----G--ATCAC--T-----AGAAATTCAAA----------------------------AAATATTTTTAAATTCA----------------T--------------AATTTTTATAGGCTGTCAACGATCTACCAGTTTTTCTGAAGGGCGGCCCAGTAGATAAGGT
droEle1 scf7180000491273:1086497-1086721 + AAATTT-----------------------------------------------CTTAAATATTTAAGTATAATTTT----TATGTCTTTTTTTATATTTAGCA-GTTACATAACAGACCTAA--GCAAAAATGGCTCTACCCGATGGACTCTCTAGCAAAATGAAGGTTTTCCAGGTGAGTTAC----A-ATGTCC--------TAAAATATAAA----------------------------ATATATTTTAATGCCCT-------------------------------TTATTTTTTAGGCTGTAAACGAATTGCCTGTTT-TTTGAAAGGCGGACCAGCGGATAAGAT
droRho1 scf7180000768102:20124-20306 - ATA---------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAA-CCTAA--GCAAAAATGGCTCTTCCCGATGGACTGTCAAATAAAATGAAGGTTTTCCAGGTAAGCTGC----G-GTTTTT--------TAAAACATTCA----------------------------ATATATTTTAAAACTCT-------------------------------ACACTTTTCAGGCTGTCAACGAGCTACCCGTTTTTTTGAAAGGCGGACCAGCGGACAAGAT
droBia1 scf7180000301500:82271-82455 + ATG---------------------------------------------------------------------------------------------TTCAACA-GTTACATAACAGACCTAA--GCAAAAATGGCTCTGCCCGATGGTCTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTGC----A-GAGCCC--------TAAAACTTAAT----------------------------ATATCTATAAAAACTCA----------------T--------------GTATTTTATAGGCCGTCAACGAATTGCCCGTTTTTCTGAAAGGCGGACCAGCGGACAAGGT
droTak1 scf7180000415779:693190-693373 - ATA---------------------------------------------------------------------------------------------TTCAACA-GTTACATAACAGTTCTAA--GCAAAAATGGCTCTACCCGATGGTCTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTGT----G-AAGCCC--------CAGAACTTGAA----------------------------ATAAATGTTAA-ACTCT----------------A--------------CATTTTTATAGGCCGTCAACGAGTTGCCCGTTTTTCTGAAAGGCGGACCCATTGATAAGGC
droEug1 scf7180000409554:3971133-3971363 - ATTTCTTA--------------AGT----T-TTCTT----------------TTTTAAACATTGAAGT---------GCA--TTTTTTTT-ATACAACCAGCA-GTTACATAACCGATTTAA--GCAAAAATGGCTCTACCCGATGGACTGTCTAACAAAATGAAGGTTTTCCAGGTGAGCTTA----GAGAAGCC--------AAAAATTTTAA----------------------------AAATATT-AAAGGTTCT----------------T--------------AAATATTTTAGGCTGTCAACGAGCTGCCCGTTTTTCTGAAAGGCGGCCCAGCGGACAAGGC
dm3 chr2L:2192666-2192883 - ACACT-----------------------------------------------GCTTGAATAT--------TGCTTTTCTA-----------TTTTATTCAGCA-GTTACATAAGAGACCTAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTTGGATAT----A-T----------------------CTATGA-TA--------------TCTTCGCATATGTATTAAGACTCATA--------ACTC-AT--------------AATTTTTGCAGGCCGTTAACGAGCTGCCCGTTTTTCTGAAAGGCGGACCTGCGGATAAGAT
droSim2 2l:2086233-2086423 - ------------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAGACCTAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTTCAGGTGAGTTTTGTA-A----------ATGGTG-------------A-TA--------------TCTGCGCATATGTTTAAAGATTCATA--------ACTC-AT--------------AATTTTTGCAGGCCGTCAACGAGTTGCCCGTTTTTCTGAAAGGCGGACCAGCGGATAAGAT
droSec2 scaffold_5:370124-370361 - ACTTCAC--TGCAAC--AA-T--AA----C-TC--T----------------GTTTGAATAT--------TCCTTTTGTA-----------ATTTATTCAGCA-GTTACATAACAGACCTAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTGGGTTTTGTA-A----------ATGGTG-------------A-TA--------------TCTTCGCATATGTATTAAGACTCATA--------ACTC-AT--------------AATTTTTGCAGGCCGTCAACGAACTGCCCGTTTTTCTGAAAGGCGGACCAGCGGATAAGAT
droYak3 2L:2168068-2168250 - ------------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAGACATAG--GCGAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTTTTTTAG--AGA-C--------TGGCTCTTCGA----------------------------ATATGTTTTAAGACTCA-------------------------------TAACTTTTCAGGCCGTCAACGAGCTGCCCGTTTTTCTGAAGGGCGGACCAGCGGATAAGAT
droEre2 scaffold_4929:2229699-2229926 - CACTGCGACG--------G-A--GA----T-TCTTT----------------GCTTAAATAC--------GACTATTGCA-----------TTTTATTCGGCA-GTTACATAACAGGCATAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTTTCTA-G--AGACT--------GGCAACTTCGA----------------------------ATAAGTTTTAAGCCTCT-------------------------------TAACTTTTCAGGCCGTCAACGAGATGCCCGTTTTTCTGAAAGGCGGACCAGCGGATAAGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AATTGTGACTGCATA--AA-TAAGTTTTGC-TC--CGTTTTAAC----ACAC-TTTAATTAT--------TGCAATTAAT-----------GCATTTTCAGCC-ATTACATAATACCTATTC--GAAATAATGGCGTTACCCGAGGGTTTGGCTAGCAAAATGAAGACTTTCCAGGCATGTTAA----G-C---A--A-T-----------------T-ATATTTTGT---------------ATATTTAAA----------CAGTTGATTGACATC--------------AATTTCAACAGGCTCACAATGATCTGCCCGTGTTCCTTAAGGGCGGACCCCCCGACAAGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................ATGATCTGCCCGTGTTCCT........................19111.0011013000000000000101120010000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................CTGCCCGTGTTCCTTAAGGGC.................2119.009000000000000000104220000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGAC.....2017.007000000000000000001320100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAAGGGCGGACCCCCCGACA....2016.006002000000000000001120000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACA....2114.004001000000000000000300000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAATGATCTGCCCGTGTTCC.........................2014.004000000000000000004000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACAAGA.2414.004000000000000000000020110000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ATGATCTGCCCGTGTTCC.........................1813.003002000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................GGCGTTACCCGAGGGTTTGGCT......................................................................................................................................................................................................2213.003000000000000000012000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AATGATCTGCCCGTGTTCC.........................1913.003100000000000000001000100000000000000000000000000000000000000000
.................................................................................................................TACCTATTC--GAAATAATGGCGTTACC...................................................................................................................................................................................................................2612.002000000000000000000110000000000000000000000000000000000000000000
........................................................................................................................TC--GAAATAATGGCGTTACC...................................................................................................................................................................................................................1912.002001000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGGCTCACAATGATCTGCCCGTGTTCC.........................2712.002001000000000000001000000000000000000000000000000000000000000000
......................................................................................................................ATTC--GAAATAATGGCGTTACCCG.................................................................................................................................................................................................................2312.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................ATTC--GAAATAATGGCGTTACCC..................................................................................................................................................................................................................2212.002001000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CAGGCTCACAATGATCTGCCCGTGT............................2512.002000000000000000011000000000000000000000000000000000000000000000
...............................................................................................................................................AGGGTTTGGCTAGCAAAATG.............................................................................................................................................................................................2012.002001000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAGGGCGGACCCCCCGACAAG..2112.002001000000000000000000000000000000000000000000000000000000000100
................................................................................................................................TAATGGCGTTACCCGAGGGTTTGGCT......................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................AGGGTTTGGCTAGCAAAATGA............................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GGCTCACAATGATCTGCCCGTGT............................2311.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TGTTCCTTAAGGGCGGACCCCC.........2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAAGGGCGGACCCCCCGACAAG..2211.001000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................TATTC--GAAATAATGGCGTTAC....................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TGCCCGTGTTCCTTAAGGGCGG...............2211.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCACAATGATCTGCCCGTGTTCCT........................2411.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ACAATGATCTGCCCGTGTTC..........................2011.001000000000000000100000000000000000000000000000000000000000000000
......................................TTTAAC----ACAC-TTTAATTAT--------TGCAATTAA.................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAGGGCGGACCCCCCGACAA...2011.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................ATTC--GAAATAATGGCGTTACCCGAGGGT............................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ATGATCTGCCCGTGTTCCTTA......................2111.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TCCTTAAGGGCGGACCCCCCGACA....2411.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................CTATTC--GAAATAATGGCG........................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................ATACCTATTC--GAAATAATGGCGTTACCC..................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CGAGGGTTTGGCTAGCAAAATGAAGACT.......................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................CTTAAGGGCGGACCCCCCGACA....2211.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................GAAATAATGGCGTTACCCG.................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CAGGCTCACAATGATCTGCCC................................2111.001000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................TTC--GAAATAATGGCGTTACCC..................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AAATAATGGCGTTACCCGAGGG.............................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CAGGCTCACAATGATCTGCCCGT..............................2311.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGGCTCACAATGATCTGCCCGTGTTC..........................2611.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................GGCGTTACCCGAGGGTTTGGC.......................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................GAAATAATGGCGTTACCC..................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................TACCCGAGGGTTTGGCTAGCA..................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGCAAAATGAAGACTTTCCAGGCTC.............................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GCAAAATGAAGACTTTCCAGGCTC.............................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTTAAGGGCGGACCCCCCGAC.....2111.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................TGGCGTTACCCGAGGGTTTGGCTA.....................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CCTTAAGGGCGGACCCCCCGAC.....2211.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................TATTC--GAAATAATGGCGTTACCC..................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................AAATGAAGACTTTCCAGGC...............................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................GGCGTTACCCGAGGGTTTG.........................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................AATACCTATTC--GAAATAATGGC.........................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................CGAGGGTTTGGCTAGCAAAAT..............................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................ATTACATAATACCTATTC--GA..................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................AATGGCGTTACCCGAGGGTT...........................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGGCTCACAATGATCTGCCCG...............................2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................AAATGAAGACTTTCCAGGCTCA............................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CACAATGATCTGCCCGTGTTC..........................2111.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................CCTATTC--GAAATAATGGCGTTACCC..................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAATGATCTGCCCGTGTTCCTTAA.....................2411.001000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................ACCCGAGGGTTTGGCTAGCA..................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AAATAATGGCGTTACCCGA................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAATGATCTGCCCGTGTTCCT........................2111.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................CGAGGGTTTGGCTAGCAAAATG.............................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................GAGGGTTTGGCTAGCAAAATG.............................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................ATAATACCTATTC--GAAATAATG...........................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................CGAGGGTTTGGCTAGCAA.................................................................................................................................................................................................1811.001000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................AATGGCGTTACCCGAGGGTTTGGCT......................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................TC--GAAATAATGGCGTTAC....................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACAAG..2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCGACAA...2211.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TGCCCGTGTTCCTTAAGGGC.................2011.001000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................AATACCTATTC--GAAATAATGGCGTTA.....................................................................................................................................................................................................................2611.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAAGGGCGGACCCCCCGACAAGA.2311.001000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGGCTCACAATGATCTGCCCGTGT............................2411.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................CTATTC--GAAATAATGGCGTTACCC..................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTAAGGGCGGACCCCCCG.......1811.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................CGAGGGTTTGGCTAGCAAAA...............................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................TTACCCGAGGGTTTGGCTAGCAAAATGA............................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CACAATGATCTGCCCGTGTTT..........................2111.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................ATGAAGACTTTCCAGGCTCC............................................................................................................................................................................2040.251000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................GGCATGTTAA----G-C---A--A-T-----------------T-TA...................................................................................................................................18200.051000000000000000000000000000000001000000000000000000000000000000
droMoj3
AATTGTGAAAA--TTCAT-------TTTCCTTC--TACTTTATT----TCAC-TTATATTAT--------TATTCTTAAT-----------GGATTTTCAGCAAATTACATAATACTCATCA--GAAATAATGGCGTTACCCGAAGGTTTGGCTGGCAAAATGAAGACTTTCCAGGCAGTTTAA----A-C---A--T---------------------ATATTTTAAGTATCTTC--------------------------TTTTAGTTAACA-AC--------------ATTTCTTGCAGGCTGTCAATGATTTGCCTGTGTTCCTTAAGGGCGGACCCGCCGATAAGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................TTACATAATACTCATCA--GAAAT...............................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................................TGCCTGTGTTCCTTAAGGGCGGACC............2511.001000100
............................................................................................................................GAAATAATGGCGTTACCCG.................................................................................................................................................................................................................1911.001100000
.............................................................................................................................................CGAAGGTTTGGCTGGCAAAATGAAG..........................................................................................................................................................................................2511.001100000
..................................................................................................................................ATGGCGTTACCCGAAGGT............................................................................................................................................................................................................1811.001000001
.........................................................................................................................................................TGGCAAAATGAAGACTTTGTC..................................................................................................................................................................................2140.251000100
droGri2
AATTGTGAGAA--CTTATAGTTGGTCTTG------GACTTTGTTTGGCACTCGTTTAAATTT--------TGCACTTAAT-----------GTATTTGCAGCA-ATTACATAACAACAATTA--TCAACTATGGCGTTACCTGAGGGACTAGCTGGCAAAATGAAGACTTTCCAGGCATGTTAT----A-A---A--A-T-----------------T-AT-----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TAATT-------------------------------------------------------TT--------TATTTTTTGT-----------GAACATTTAGCA-ATTACATAACTGACAATTGGAAAATTATGGCGCTACCTGAGGGACTGTCAAACAAAATGAAGACTTTCCAAGTGAGTTTA----T---------T------------------T-AAAATACACGTAA----------------------------------TGATAATT-ATATTTTCATGGGTCCTTTTTTTCCAGGCCGTCAATGATTTACCTGTTTTTCTAAAAGGTGGTCCAGCGGATAAGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................AAAAGGTGGTCCAGCGGATAAGA.2315.00512101
.............................................................................................................................................TGAGGGACTGTCAAACAA.................................................................................................................................................................................................1814.00440000
.........................................................................................................................................................................................................................................................................................................................................AAAGGTGGTCCAGCGGATA....1913.00330000
..............................................................................................................................................GAGGGACTGTCAAACAAAAT..............................................................................................................................................................................................2012.00220000
.............................................................................................................................................TGAGGGACTGTCAAACAAAA...............................................................................................................................................................................................2012.00201100
.........................................................................................................................................................................................................................................................................................................................................AAAGGTGGTCCAGCGGAT.....1812.00220000
............................................................................................................................................CTGAGGGACTGTCAAACA..................................................................................................................................................................................................1812.00220000
........................................................................................................................................CTACCTGAGGGACTGTCA......................................................................................................................................................................................................1812.00220000
..........................................................................................................................................ACCTGAGGGACTGTCAAACAAAA...............................................................................................................................................................................................2312.00220000
................................................................................................................................TTATGGCGCTACCTGAGGGACTGTCA......................................................................................................................................................................................................2612.00211000
.........................................................................................................................................................................................................................................................................................................................................AAAGGTGGTCCAGCGGATAAGA.2212.00220000
..........................................................................................................................................................................................................................................................................................................................................AAGGTGGTCCAGCGGATA....1812.00210001
.................................................................................................................CTGACAATTGGAAAATTATGGCGCT......................................................................................................................................................................................................................2512.00220000
.................................................................................................................CTGACAATTGGAAAATTATGGCGCTACCT..................................................................................................................................................................................................................2912.00220000
.................................................................................................................................TATGGCGCTACCTGAGGGACT..........................................................................................................................................................................................................2112.00200200
........................................................................................................................................................................................................................................................................................................................................AAAAGGTGGTCCAGCGGAT.....1912.00211000
...................................................................................................................................TGGCGCTACCTGAGGGACTGT........................................................................................................................................................................................................2111.00110000
......................................................................................................................AATTGGAAAATTATGGCGCT......................................................................................................................................................................................................................2011.00100001
...............................................................................................................................ATTATGGCGCTACCTGAGGG.............................................................................................................................................................................................................2011.00100001
.........................................................................................................................................TACCTGAGGGACTGTCAAACAAAAT..............................................................................................................................................................................................2511.00110000
..............................................................................................................................................GAGGGACTGTCAAACAAAATCT............................................................................................................................................................................................2211.00110000
.............................................................................................................................................TGAGGGACTGTCAAACAAAAT..............................................................................................................................................................................................2111.00100100
........................................................................................................................................CTACCTGAGGGACTGTCAAACAAAA...............................................................................................................................................................................................2511.00110000
........................................................................................................ATTACATAACTGACAATTGGA...................................................................................................................................................................................................................................2111.00101000
...............................................................................................................AACTGACAATTGGAAAATTATGGCGCT......................................................................................................................................................................................................................2711.00100100
..............................................................................................................................AATTATGGCGCTACCTGAGGGAC...........................................................................................................................................................................................................2311.00100001
....................................................................................................................................................................................................................................................................................................................................TTCTAAAAGGTGGTCCAGCGGAT.....2311.00100100
................................................................................................................ACTGACAATTGGAAAATTATGGCGCT......................................................................................................................................................................................................................2611.00110000
........................................................................................................................................................................................................................................................................................................................................AAAAGGTGGTCCAGCGGA......1811.00110000
...............................................................................................................AACTGACAATTGGAAAAT...............................................................................................................................................................................................................................1811.00110000
.................................................................................................................................TATGGCGCTACCTGAGGGACTGTCAAA....................................................................................................................................................................................................2711.00110000
..........................................................................................................................................ACCTGAGGGACTGTCAAA....................................................................................................................................................................................................1811.00101000
.....................................................................................................................................................................................................................................................................................................................ATGATTTACCTGTTTTTCTAA......................2111.00101000
..........................................................................................................................................................................................................................................................................................................................................AAGGTGGTCCAGCGGATAAGA.2111.00110000
..................................................................................................................................................GACTGTCAAACAAAATGAAGACT.......................................................................................................................................................................................2311.00110000
.........................................................................................................................................................................................................................................................................................................................................AAAGGTGGTCCAGCGGATAAG..2111.00101000
.................................................................................................................................TATGGCGCTACCTGAGGGACTGTC.......................................................................................................................................................................................................2411.00110000
...................................................................................................AGCA-ATTACATAACTGACA.........................................................................................................................................................................................................................................1911.00101000
..................................................................................................................................................................................................................................................................................................................TCAATGATTTACCTGTTTTTC.........................2111.00101000
..........................................................................................................................................ACCTGAGGGACTGTCAAACAAAAT..............................................................................................................................................................................................2411.00110000
.......................................................................................................................................................................................................................................................................................................................................TAAAAGGTGGTCCAGCGGATAAGA.2411.00110000
........................................................................................................................................................................................................................................................................................................................................AAAAGGTGGTCCAGCGGATA....2011.00110000
............................................................................................................................................................................................................................................................................................................................................GGTGGTCCAGCGGATAAGA.1911.00101000
.............................................................................................................................................TGAGGGACTGTCAAACAAAATGA............................................................................................................................................................................................2311.00110000
..........................................................................................................................................................................................................................................................................................................................................AAGGTGGTCCAGCGGATAAGAT2211.00110000
dp5
ATT---------------------------------------------------------------------------------------------TTCAGCA--TTACATAACAGATCATT--AAGACCATGGCGCTGCCCGAGGGATTGTCTAACAAAATGAAGGTCTTCCAGGTGAGTTAT----C-C---A--TT------------------C-ATATTTCAAGTAAATCA--------------------------CATTTGATAAGC-AT--------------AGTTTCTTTAGGCTGTCAACGATGTGCCAGTTTTCCTGAAAGGTGGCCCCATAGACAAGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................ATGGCGCTGCCCGAGGGATTGTCT......................................................................................................................................................................................................2414.0040100003000
.................................................................................................................................CATGGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2413.0030001002000
..................................................................................................................................ATGGCGCTGCCCGAGGGATTGT........................................................................................................................................................................................................2212.0020200000000
.................................................................................................................................CATGGCGCTGCCCGAGGGATT..........................................................................................................................................................................................................2112.0020000020000
........................................................................................................................TT--AAGACCATGGCGCTGCCCGAGGGA............................................................................................................................................................................................................2612.0020200000000
...............................................................................................................................ACCATGGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2612.0020000002000
...................................................................................................................................TGGCGCTGCCCGAGGGATT..........................................................................................................................................................................................................1912.0020200000000
.................................................................................................................................CATGGCGCTGCCCGAGGGATTG.........................................................................................................................................................................................................2212.0020200000000
..................................................................................................................................................................................................................................................................................................................................TTTCCTGAAAGGTGGCCCCATAGACA....2612.0020001010000
...............................................................................................................................................AGGGATTGTCTAACAAAATGAAGGTCT......................................................................................................................................................................................2711.0010100000000
........................................................................................................................................CTGCCCGAGGGATTGTCTA.....................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................TTCCTGAAAGGTGGCCCCATAGAC.....2411.0010001000000
.......................................................................................................................................................................................................................................................................................................................GATGTGCCAGTTTTCCTGAA.....................2011.0010100000000
..................................................................................................................................ATGGCGCTGCCCGAGGGAT...........................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................TGGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................ACCATGGCGCTGCCCGAGGT.............................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................ACAAAATGAAGGTCTTCCA..................................................................................................................................................................................1911.0010100000000
.......................................................................................................................ATT--AAGACCATGGCGCTGCC...................................................................................................................................................................................................................2011.0010001000000
......................................................................................................................CATT--AAGACCATGGCGCTGCCC..................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................GATCATT--AAGACCATGGCGCTG.....................................................................................................................................................................................................................2211.0011000000000
.........................................................................................................................................................................................................................................................................................................................TGTGCCAGTTTTCCTGAAAGG..................2111.0010100000000
........................................................................................................................................CTGCCCGAGGGATTGTCTAAC...................................................................................................................................................................................................2111.0010000010000
..............................................................................................................................GACCATGGCGCTGCCCGAGGGATTGTCT......................................................................................................................................................................................................2811.0010000001000
......................................................................................................................CATT--AAGACCATGGCGCTGCCCGAGG..............................................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................GTGCCAGTTTTCCTGAAAGGTGGCCCC...........2711.0010001000000
.......................................................................................................................ATT--AAGACCATGGCGCTGCCC..................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................AGTTTTCCTGAAAGGTGGCC.............2011.0010100000000
..................................................................................................................................ATGGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2311.0010000010000
.........................................................................................................................................................TAACAAAATGAAGGTCTTC....................................................................................................................................................................................1911.0010100000000
....................................................................................................................................GGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2111.0010001000000
...................................................................................................................................TGGCGCTGCCCGAGGGATTGTCC......................................................................................................................................................................................................2311.0010001000000
...............................................................................................................AACAGATCATT--AAGACCAT............................................................................................................................................................................................................................1911.0010000010000
...................................................................................................................................TGGCGCTGCCCGAGGGATTGTCTAACAAA................................................................................................................................................................................................2911.0010000001000
...............................................................................................................................ACCATGGCGCTGCCCGAGGG.............................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................................................................GTTTTCCTGAAAGGTGGCCCC...........2111.0010100000000
..................................................................................................................................ATGGCGCTGCCCGAGGGATT..........................................................................................................................................................................................................2011.0010000010000
........................................................................................................................................CTGCCCGAGGGATTGTCTAA....................................................................................................................................................................................................2011.0010000001000
................................................................................................................ACAGATCATT--AAGACCATGG..........................................................................................................................................................................................................................2011.0010000001000
.......................................................................................................................ATT--AAGACCATGGCGCTGCCCGAG...............................................................................................................................................................................................................2411.0010100000000
...................................................................................................................................TGGCGCTGCCCGAGGGATTGTCTAACA..................................................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................................................................TCCTGAAAGGTGGCCCCATAGAC.....2311.0010100000000
..............................................................................................................TAACAGATCATT--AAGACCA.............................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................AGTTTTCCTGAAAGGTGGCCC............2111.0010100000000
................................................................................................................................................................................................................................................................................................................................GTTTTCCTGAAAGGTGGCC.............1911.0010000001000
............................................................................................................................AAGACCATGGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2911.0010001000000
.................................................................................................................................CATGGCGCTGCCCGAGGGAT...........................................................................................................................................................................................................2011.0010100000000
............................................................................................................CATAACAGATCATT--AAGACCATGGCGCTG.....................................................................................................................................................................................................................2911.0010000001000
........................................................................................................................................................................................................................................................................................................................................GAAAGGTGGCCCCATAGAC.....1911.0010001000000
...................................................................................................................GATCATT--AAGACCATGGCGC.......................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................GCGCTGCCCGAGGGATTG.........................................................................................................................................................................................................1811.0010100000000
..................................................................................................................................ATGGCGCTGCCCGAGGGATTGTCTAACA..................................................................................................................................................................................................2811.0010000001000
.................................................................................................................................CATGGCGCTGCCCGAGGGATTGTCTAA....................................................................................................................................................................................................2711.0010001000000
droPer2
ATT---------------------------------------------------------------------------------------------TTCAGCA--TTACATAACAGATCATA--AAGACCATGGCGCTGCCCGAGGGATTGTCTAACAAAATGAAAGTCTTCCAGGTGAGTTAT----C-C---A--TT------------------C-ATATTTCAAGTAAATCA--------------------------CATTTGATAAGC-AT--------------AGTTTCTTTAGGCTGTCAACGATGTGCCAGTTTTCCTGAAAGGTGGCCCCATAGACAAGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................GCCCGAGGGATTGTCTAAC...................................................................................................................................................................................................1913.003000003
..............................................................................................................TAACAGATCATA--AAGACCAT............................................................................................................................................................................................................................2012.002000002
..............................................................................................................................................GAGGGATTGTCTAACAAAAT..............................................................................................................................................................................................2012.002000002
..................................................................................................................................ATGGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2312.002000002
..........................................................................................................................................GCCCGAGGGATTGTCTAACAAA................................................................................................................................................................................................2212.002000002
...................................................................................................................GATCATA--AAGACCATGGCGCT......................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................GCGCTGCCCGAGGGATTGTCT......................................................................................................................................................................................................2111.001000001
..................................................................................................................................ATGGCGCTGCCCGAGGGATTGTCT......................................................................................................................................................................................................2411.001010000
.........................................................................................................................................TGCCCGAGGGATTGTCTAAC...................................................................................................................................................................................................2011.001000001
..............................................................................................................................................GAGGGATTGTCTAACAAAATG.............................................................................................................................................................................................2111.001000001
..........................................................................................................................................GCCCGAGGGATTGTCTAACA..................................................................................................................................................................................................2011.001000001
............................................................................................................................................CCGAGGGATTGTCTAACA..................................................................................................................................................................................................1811.001010000
...................................................................................................................................TGGCGCTGCCCGAGGGATTG.........................................................................................................................................................................................................2011.001000001
....................................................................................................................ATCATA--AAGACCATGGCGCTG.....................................................................................................................................................................................................................2111.001010000
..................................................................................................................................ATGGCGCTGCCCGAGGGATTG.........................................................................................................................................................................................................2111.001000001
.........................................................................................................................................TGCCCGAGGGATTGTCTAA....................................................................................................................................................................................................1911.001010000
.............................................................................................................................AGACCATGGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2811.001000001
...........................................................................................................................................................................................................................................................................................................................................AGGTGGCCCCATAGACAAG..1911.001010000
.............................................................................................................ATAACAGATCATA--AAGACCATGG..........................................................................................................................................................................................................................2311.001000001
...................................................................................................................................TGGCGCTGCCCGAGGGATTGTCTAACA..................................................................................................................................................................................................2711.001010000
....................................................................................................................................GGCGCTGCCCGAGGGATTGTC.......................................................................................................................................................................................................2111.001000001
droAna3
ATTTT---------------------------------------------------------------------------AATTGCTTTAACTAATTGCAGCA-ATTACATAACAAATCTAA--ACGATTATGGCGCTGCCCGAGGGACTGTCCAACAAAATGAAGGTTTTCCAGGTAAGTTTG----T-C---A--G-A----------------TTTATATTT-AAAAAAA-TC--------------------------TATTAATTAATA-AT--------------ATGTTTCAAAGGCCGTCAATGAACTGCCAGTTTTCCTGAAAGGTGGACCCGCTGACAAGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................ATGGCGCTGCCCGAGGGACTGTCC......................................................................................................................................................................................................24117.00176000011
...................................................................................................................................TGGCGCTGCCCGAGGGACTGTCC......................................................................................................................................................................................................2314.004300001
....................................................................................................................................GGCGCTGCCCGAGGGACTGTCCA.....................................................................................................................................................................................................2314.004300010
.................................................................................................................................TATGGCGCTGCCCGAGGGACTGTCC......................................................................................................................................................................................................2514.004100012
...................................................................................................................................TGGCGCTGCCCGAGGGACTGTCCA.....................................................................................................................................................................................................2414.004300001
....................................................................................................................................GGCGCTGCCCGAGGGACTGTCCAACA..................................................................................................................................................................................................2613.003300000
................................................................................................................................................................................................................................................................................................................................GTTTTCCTGAAAGGTGGACCC...........2113.003200010
....................................................................................................................................GGCGCTGCCCGAGGGACTGTCC......................................................................................................................................................................................................2213.003300000
...............................................................................................................................ATTATGGCGCTGCCCGAGGGACTGTCC......................................................................................................................................................................................................2713.003100011
..................................................................................................................................ATGGCGCTGCCCGAGGGACTGTCCAAC...................................................................................................................................................................................................2712.002200000
................................................................................................................................TTATGGCGCTGCCCGAGGGACTGTCC......................................................................................................................................................................................................2612.002200000
...............................................................................................................................ATTATGGCGCTGCCCGAGGGACT..........................................................................................................................................................................................................2312.002000011
..................................................................................................................................ATGGCGCTGCCCGAGGGACTGTCCAACA..................................................................................................................................................................................................2812.002200000
.....................................................................................................................................GCGCTGCCCGAGGGACTGTCCAACA..................................................................................................................................................................................................2512.002200000
..................................................................................................................................ATGGCGCTGCCCGAGGGACTGTC.......................................................................................................................................................................................................2312.002000002
.......................................................................................................................................................................................................................................................................................................................................TGAAAGGTGGACCCGCTGACA....2112.002200000
.......................................................................................................................................GCTGCCCGAGGGACTGTCCAACA..................................................................................................................................................................................................2311.001100000
.................................................................................................................................TATGGCGCTGCCCGAGGGACTGTCCAAC...................................................................................................................................................................................................2811.001000001
..................................................................................................................................ATGGCGCTGCCCGAGGGACT..........................................................................................................................................................................................................2011.001100000
...............................................................................................................................ATTATGGCGCTGCCCGAGGG.............................................................................................................................................................................................................2011.001100000
................................................................................................................ACAAATCTAA--ACGATTATGGCGCT......................................................................................................................................................................................................................2411.001000001
...........................................................................................................................................CCCGAGGGACTGTCCAACAAAATGA............................................................................................................................................................................................2511.001000001
....................................................................................................................................GGCGCTGCCCGAGGGACTGTCCAAC...................................................................................................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................................................................................................TTCCTGAAAGGTGGACCCGCTGACAAG..2711.001000001
...............................................................................................................................ATTATGGCGCTGCCCGAGGGACTGTCCA.....................................................................................................................................................................................................2811.001100000
...................................................................................................................................TGGCGCTGCCCGAGGGACTGTCCAACA..................................................................................................................................................................................................2711.001100000
.................................................................................................................CAAATCTAA--ACGATTATGGCGCT......................................................................................................................................................................................................................2311.001000001
................................................................................................................................TTATGGCGCTGCCCGAGGGACTGTCCA.....................................................................................................................................................................................................2711.001000010
.....................................................................................................................................GCGCTGCCCGAGGGACTGTCCAACAAA................................................................................................................................................................................................2711.001100000
.................................................................................................................................TATGGCGCTGCCCGAGGGACT..........................................................................................................................................................................................................2111.001000010
..............................................................................................................................GATTATGGCGCTGCCCGAGGGACTGTCC......................................................................................................................................................................................................2811.001000001
.................................................................................................................................TATGGCGCTGCCCGAGGGACTGTCCA.....................................................................................................................................................................................................2611.001100000
....................................................................................................................................................CTGTCCAACAAAATGAAGGTTT......................................................................................................................................................................................2211.001100000
...................................................................................................................AATCTAA--ACGATTATGGCGCTGCCCG.................................................................................................................................................................................................................2611.001000001
................................................................................................................................TTATGGCGCTGCCCGAGGGACTGTC.......................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................................................................................................................................................................AGGTGGACCCGCTGACAAG..1911.001100000
..........................................................................................................TACATAACAAATCTAA--ACGAT...............................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................GCGCTGCCCGAGGGACTGTCCA.....................................................................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................GTTTTCCTGAAAGGTGGACCCGCT........2411.001000010
.................................................................................................................................................................................................................................................................................................................................TTTTCCTGAAAGGTGGACC............1911.001000010
..........................................................................................................................................GCCCGAGGGACTGTCCAACA..................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................TTTCCTGAAAGGTGGACCCGC.........2111.001100000
....................................................................................................................................................................................................................................................................................................................................TCCTGAAAGGTGGACCCGCTGAC.....2311.001100000
.......................................................................................................................................GCTGCCCGAGGGACTGTCCA.....................................................................................................................................................................................................2011.001100000
...................................................................................................................................TGGCGCTGCCCGAGGGAC...........................................................................................................................................................................................................1811.001100000
....................................................................................................................................................................................................................................................................................................................AATGAACTGCCAGTTTTCCT........................2011.001100000
.........................................................................................................................................................................................................................................................................................................................ACTGCCAGTTTTCCTGAAAGGTGGACCC...........2811.001100000
............................................................................................................................................................................................................................................................................................................................GCCAGTTTTCCTGAAAGGTGGACCCG..........2611.001100000
.....................................................................................................................................................................................................................................................................................................................ATGAACTGCCAGTTTTCCTGA......................2111.001100000
.............................................................................................................................CGATTATGGCGCTGCCCGAGGGAC...........................................................................................................................................................................................................2411.001100000
................................................................................................................................................................................................................................................................................................................................GTTTTCCTGAAAGGTGGACC............2011.001100000
............................................................................................................................................................................................................................................................................................................................GCCAGTTTTCCTGAAAGGTGGACCC...........2511.001000001
.................................................................................................................................TATGGCGCTGCCCGAGGGAC...........................................................................................................................................................................................................2011.001100000
..............................................................................................................................................GAGGGACTGTCCAACAAAATGAAGGTT.......................................................................................................................................................................................2711.001000010
........................................................................................................................................................................................................................................................................................................................AACTGCCAGTTTTCCTGAAAGG..................2211.001100000
..............................................................................................................................................GAGGGACTGTCCAACAAAA...............................................................................................................................................................................................1911.001000010
.......................................................................................................................................GCTGCCCGAGGGACTGTCCAAC...................................................................................................................................................................................................2211.001000010
........................................................................................................................................................................................................................................................................................................................AACTGCCAGTTTTCCTGAAAGGTGG...............2511.001100000
.............................................................................................................................................................................................................................................................................................................GGCCGTCAATGAACTGCCAGTTTTCCTGA......................2911.001100000
.........................................................................................................................................................................................................................................................................................................................ACTGCCAGTTTTCCTGAAAGGTG................2311.001100000
........................................................................................................................................................................................................................................................................................................................................GAAAGGTGGACCCGCTGACA....2011.001100000
...................................................................................................................................................................................................................................................................................................................................TTCCTGAAAGGTGGACCCGC.........2011.001000010
..........................................................................................................................................................AACAAAATGAAGGTTTTCCA..................................................................................................................................................................................2011.001000010
............................................................................................................................................................................................................................................................................................................................GCCAGTTTTCCTGAAAGGTGGACCCGCT........2811.001000001
................................................................................................................................................................................................................................................................................................................................GTTTTCCTGAAAGGTGGACCCGCTGACA....2811.001100000
..........................................................................................................................................GCCCGAGGGACTGTCCAAC...................................................................................................................................................................................................1911.001100000
.............................................................................................................................................................AAAATGAAGGTTTTCCAGGCC..............................................................................................................................................................................2140.251100000
droBip1
ATTTT---------------------------------------------------------------------------AATTGCTTTAACTAATTGCAGCA-ATTACATAACAAATCTAA--ACGATTATGGCGCTGCCCGAGGGACTGTCCAACAAAATGAAGGTTTTCCAGGTAAGTTTG----T-C---A--G-T----------------TC-ATTCTTTAAAAAAA-TA--------------------------TATAAAATAATA-TT--------------TTATTTTTAAGGCCGTCAACGAACTGCCAGTTTTCCTGAAAGGTGGACCCGCCGACAAGATSizeHit CountTotal NormTotal
No Reads
droKik1
ACATTTT-------------CAAGT----T-TT-------------------------------------------TTGC-AATGGTTTA-ATATTTTCAGAA-GTTACATAAGAG---CAA--GCAGATATGGCGCTGCCCGAGGGTTTGTCCAACAAAATGAAGGTTTTCCAGGTGAGTTTC----G-TTACCCCT------TGGTTTTTTATATGA-TT--------------------------CTTTAACAGTTA-----------TG---T--------------ATGCTTTTTAGGCTGTCAACGAGCTGCCCGTTTTCCTGAAAGGTGGGCCTGCGGACAAAATSizeHit CountTotal NormTotal
No Reads
droFic1
ATA---------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAAATCTAA--GCGA-AATGGCTCTACCCGATGGACTCTCTAATAAAATGAAGGTTTTCCAGGTTAGTTGG----G--ATCAC--T-----AGAAATTCAAA----------------------------AAATATTTTTAAATTCA----------------T--------------AATTTTTATAGGCTGTCAACGATCTACCAGTTTTTCTGAAGGGCGGCCCAGTAGATAAGGTSizeHit CountTotal NormTotal
No Reads
droEle1
AAATTT-----------------------------------------------CTTAAATATTTAAGTATAATTTT----TATGTCTTTTTTTATATTTAGCA-GTTACATAACAGACCTAA--GCAAAAATGGCTCTACCCGATGGACTCTCTAGCAAAATGAAGGTTTTCCAGGTGAGTTAC----A-ATGTCC--------TAAAATATAAA----------------------------ATATATTTTAATGCCCT-------------------------------TTATTTTTTAGGCTGTAAACGAATTGCCTGTTT-TTTGAAAGGCGGACCAGCGGATAAGATSizeHit CountTotal NormTotal
No Reads
droRho1
ATA---------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAA-CCTAA--GCAAAAATGGCTCTTCCCGATGGACTGTCAAATAAAATGAAGGTTTTCCAGGTAAGCTGC----G-GTTTTT--------TAAAACATTCA----------------------------ATATATTTTAAAACTCT-------------------------------ACACTTTTCAGGCTGTCAACGAGCTACCCGTTTTTTTGAAAGGCGGACCAGCGGACAAGATSizeHit CountTotal NormTotal
No Reads
droBia1
ATG---------------------------------------------------------------------------------------------TTCAACA-GTTACATAACAGACCTAA--GCAAAAATGGCTCTGCCCGATGGTCTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTGC----A-GAGCCC--------TAAAACTTAAT----------------------------ATATCTATAAAAACTCA----------------T--------------GTATTTTATAGGCCGTCAACGAATTGCCCGTTTTTCTGAAAGGCGGACCAGCGGACAAGGTSizeHit CountTotal NormTotal
No Reads
droTak1
ATA---------------------------------------------------------------------------------------------TTCAACA-GTTACATAACAGTTCTAA--GCAAAAATGGCTCTACCCGATGGTCTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTGT----G-AAGCCC--------CAGAACTTGAA----------------------------ATAAATGTTAA-ACTCT----------------A--------------CATTTTTATAGGCCGTCAACGAGTTGCCCGTTTTTCTGAAAGGCGGACCCATTGATAAGGCSizeHit CountTotal NormTotal
No Reads
droEug1
ATTTCTTA--------------AGT----T-TTCTT----------------TTTTAAACATTGAAGT---------GCA--TTTTTTTT-ATACAACCAGCA-GTTACATAACCGATTTAA--GCAAAAATGGCTCTACCCGATGGACTGTCTAACAAAATGAAGGTTTTCCAGGTGAGCTTA----GAGAAGCC--------AAAAATTTTAA----------------------------AAATATT-AAAGGTTCT----------------T--------------AAATATTTTAGGCTGTCAACGAGCTGCCCGTTTTTCTGAAAGGCGGCCCAGCGGACAAGGCSizeHit CountTotal NormTotal
No Reads
dm3
ACACT-----------------------------------------------GCTTGAATAT--------TGCTTTTCTA-----------TTTTATTCAGCA-GTTACATAAGAGACCTAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTTGGATAT----A-T----------------------CTATGA-TA--------------TCTTCGCATATGTATTAAGACTCATA--------ACTC-AT--------------AATTTTTGCAGGCCGTTAACGAGCTGCCCGTTTTTCTGAAAGGCGGACCTGCGGATAAGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................GGCCGTTAACGAGCTGCC.................................1818.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GAGCTGCCCGTTTTTCTGA......................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAGGCGGACCTGCGGATAA...1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GGCCGTTAACGAGCTGCCC................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GAGACCTAG--GCAAAAATGGCTCTACC...................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GAAAGGCGGACCTGCGGAT.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AACGAGCTGCCCGTTTTTCT........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AATGGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGGCCGTTAACGAGCTGCCC................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTTACATAAGAGACCTAG--GCA.................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GGCTCTACCCGATGGACTTTCC......................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AAAATGGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAGGCGGACCTGCGGATA....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAAGGCGGACCTGCGGATAAGAT2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TCAGCA-GTTACATAAGAGACCTAG--GC..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TACATAAGAGACCTAG--GCAAA...............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TTTATTCAGCA-GTTACATAAGAGACCT........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GACCTAG--GCAAAAATGGCTC.......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GACCTAG--GCAAAAATGGCTCTACCCG.................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CCCGATGGACTTTCCAACAAAA...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAAGAGACCTAG--GCAAAA..............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACACT-----------------------------------------------GCTTGAATAT--------TGC.......................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATGGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCTGAAAGGCGGACCTGCGGAT.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................TGGCTCTACCCGATGGACT..........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................ATGGACTTTCCAACAAAA...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GGCTCTACCCGATGGACTTTCCAA....................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AGCA-GTTACATAAGAGACCTAG--GCA.................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................CTACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GTTTTTCTGAAAGGCGGACCTGCGGAT.....2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTTTTCTGAAAGGCGGACCTGC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GAAAGGCGGACCTGCGGATAA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTCTGAAAGGCGGACCTGCG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GTTAACGAGCTGCCCGTTT............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AAAATGGCTCTACCCGATG..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CTAG--GCAAAAATGGCTCTACCCGAT...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................GTTAACGAGCTGCCCGTTTTTCTGAAA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GTTTTTCTGAAAGGCGGACCTGCGGATA....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AG--GCAAAAATGGCTCTACCCGAATC.............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CTCTACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGAAAGGCGGACCTGCGGATAA...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TTTCTGAAAGGCGGACCTGC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................TAAGAGACCTAG--GCAAAAATGGC.........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTTACATAAGAGACCTAG--GCAAA...............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................A-----------TTTTATTCAGCA-GTTACATAA...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AATGGCTCTACCCGATGGACTTTCC......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GTTTTTCTGAAAGGCGGACC............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AG--GCAAAAATGGCTCTACCC..................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GAGCTGCCCGTTTTTCTGAAAGGCGGAC.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TTTTATTCAGCA-GTTACA..................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AGCA-GTTACATAAGAGACCTAG--GCAAA...............................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GGCGGACCTGCGGATAAG..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAGGCGGACCTGCGGATAAG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTTTCTGAAAGGCGGACCTGCG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AG--GCAAAAATGGCTCTAC....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTCTGAAAGGCGGACCTGCGGATA....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTTACATAAGAGACCTAG--GC..................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AAAATGGCTCTACCCGAT...............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GAAAGGCGGACCTGCGGATA....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GGCCGTTAACGAGCTGCCCGT..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................ACCTAG--GCAAAAATGGCTCTACCCG.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAAGAGACCTAG--GCAAAAA.............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAAGGCGGACCTGCGGATA....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................ACCCGATGGACTTTCCAACAA.................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTTTCTGAAAGGCGGACCTGCGGAATC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TACATAAGAGACCTAG--GCAAAA..............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGAAAGGCGGACCTGCGGATA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GAAAGGCGGACCTGCGGA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AAGGCGGACCTGCGGATAAGA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................CCTAG--GCAAAAATGGCTCTACCC..................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATGGCTCTACCCGATGGACTTTC.......................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GTTACATAAGAGACCTAG--GCAAAAAT............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droSim2
------------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAGACCTAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTTCAGGTGAGTTTTGTA-A----------ATGGTG-------------A-TA--------------TCTGCGCATATGTTTAAAGATTCATA--------ACTC-AT--------------AATTTTTGCAGGCCGTCAACGAGTTGCCCGTTTTTCTGAAAGGCGGACCAGCGGATAAGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................AAAAATGGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2912.00200020000000000000
......................................................................................................................CTAG--GCAAAAATGGCTCTACCC..................................................................................................................................................................................................................2212.00220000000000000000
................................................................................................................................................................................................................................................................................................................................GTTTTTCTGAAAGGCGGACC............2011.00101000000000000000
droSec2
ACTTCAC--TGCAAC--AA-T--AA----C-TC--T----------------GTTTGAATAT--------TCCTTTTGTA-----------ATTTATTCAGCA-GTTACATAACAGACCTAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTGGGTTTTGTA-A----------ATGGTG-------------A-TA--------------TCTTCGCATATGTATTAAGACTCATA--------ACTC-AT--------------AATTTTTGCAGGCCGTCAACGAACTGCCCGTTTTTCTGAAAGGCGGACCAGCGGATAAGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................TCTACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2312.0022000
...................................................................................................................................TGGCTCTACCCGATGGACT..........................................................................................................................................................................................................1912.0022000
.........................................................................................................................................TACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2112.0022000
...........................................................................................................................................................................................................................................................................................................................................AGGCGGACCAGCGGATAAGA.2011.0010100
.........................................................................................................................................................CAACAAAATGAAGGTTTTC....................................................................................................................................................................................1911.0011000
........................................................................................................GTTACATAACAGACCTAG--G...................................................................................................................................................................................................................................1911.0011000
.................................................................................................................................................................................................................................................................................................................................TTTTTCTGAAAGGCGGACCAGCGGA......2511.0011000
........................................................................................................................................................................................................................................................................................................................................GAAAGGCGGACCAGCGGATAA...2111.0011000
....................................................................................................................................GGCTCTACCCGATGGACTTTCCAACAA.................................................................................................................................................................................................2711.0011000
...........................................................................................................ACATAACAGACCTAG--GCAAAA..............................................................................................................................................................................................................................2111.0010100
..............................................................................................................................................................AAATGAAGGTTTTCCAGGC...............................................................................................................................................................................1911.0011000
.......................................................................................................................................................................................................................................................................................................................................TGAAAGGCGGACCAGCGGAT.....2011.0010100
........................................................................................................................................................................................................................................................................................................................................GAAAGGCGGACCAGCGGA......1811.0010001
.....................................................................................................................................................................................................................................................................................................................................TCTGAAAGGCGGACCAGCGGAT.....2211.0011000
....................................................................................................................................................................................................................................................................................................................................TTCTGAAAGGCGGACCAGCG........2011.0010100
...........................................................................................................................................................................................................................................................................................................................................AGGCGGACCAGCGGATAAG..1911.0010100
..............................................................................................................TAACAGACCTAG--GCAAAAA.............................................................................................................................................................................................................................1911.0011000
..........................................................................................................................................................................................................................................................................................................................................AAGGCGGACCAGCGGATA....1811.0011000
...................................................................................................................................TGGCTCTACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2711.0011000
.......................................................................................................................................................................................................................................................................................................................................TGAAAGGCGGACCAGCGGATAA...2211.0010100
droYak3
------------------------------------------------------------------------------------------------TTCAGCA-GTTACATAACAGACATAG--GCGAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTTTTTTAG--AGA-C--------TGGCTCTTCGA----------------------------ATATGTTTTAAGACTCA-------------------------------TAACTTTTCAGGCCGTCAACGAGCTGCCCGTTTTTCTGAAGGGCGGACCAGCGGATAAGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................AGGGCGGACCAGCGGATAAGA.2112.00200000020000
...................................................................................................................................................................................................................................................................................................................................TTTCTGAAGGGCGGACCAGCGGATA....2511.00100000010000
......................................................................................................................................................................................................................................................................................................................CGAGCTGCCCGTTTTTCTG.......................1911.00110000000000
..........................................................................................................TACATAACAGACATAG--GCGAAA..............................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................TTACATAACAGACATAG--GCGA................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................AGGGCGGACCAGCGGATAAG..2011.00100000010000
......................................................................................................A-GTTACATAACAGACATAG--GCGAAA..............................................................................................................................................................................................................................2511.00100000010000
.................................................................................................................................................GGACTTTCCAACAAAATGAAG..........................................................................................................................................................................................2111.00101000000000
.........................................................................................................................G--GCGAAAATGGCTCTACCCG.................................................................................................................................................................................................................2011.00101000000000
....................................................................................................................................GGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................TGAAGGGCGGACCAGCGGATA....2111.00100000010000
.....................................................................................................................................................................................................................................................................................................................................TCTGAAGGGCGGACCAGCGGATAAG..2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................AGGGCGGACCAGCGGATAA...1911.00100000010000
........................................................................................................................................................................................................................................................................................................................AGCTGCCCGTTTTTCTGAAGGGCGG...............2511.00101000000000
..................................................................................................................AGACATAG--GCGAAAATGGCT........................................................................................................................................................................................................................2011.00100000010000
....................................................................................................................................GGCTCTACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2611.00101000000000
...................................................................................................................GACATAG--GCGAAAATGGCTCTACCC..................................................................................................................................................................................................................2511.00110000000000
.......................................................................................................................................................................................................................................................................................................................................TGAAGGGCGGACCAGCGGATAA...2211.00100000010000
..................................................................................................................................ATGGCTCTACCCGATGGACTTTCCAAC...................................................................................................................................................................................................2711.00101000000000
............................................................................................................................................................................................................................................................................................................................GCCCGTTTTTCTGAAGGGCGGAC.............2311.00100000010000
...................................................................................................................GACATAG--GCGAAAATGGCTCTACC...................................................................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................................................................................................................................................................................AAGGGCGGACCAGCGGATAAGA.2211.00100000010000
.............................................................................................................ATAACAGACATAG--GCGAAAATG...........................................................................................................................................................................................................................2211.00101000000000
..................................................................................................................................ATGGCTCTACCCGATGGACTTTCC......................................................................................................................................................................................................2411.00100000010000
....................................................................................................................................................................................................................................................................................................................AACGAGCTGCCCGTTTTTCTGAAGGGCG................2811.00100000010000
........................................................................................................GTTACATAACAGACATAG--GCGAA...............................................................................................................................................................................................................................2311.00100000010000
droEre2
CACTGCGACG--------G-A--GA----T-TCTTT----------------GCTTAAATAC--------GACTATTGCA-----------TTTTATTCGGCA-GTTACATAACAGGCATAG--GCAAAAATGGCTCTACCCGATGGACTTTCCAACAAAATGAAGGTTTTCCAGGTGAGTTTTCTA-G--AGACT--------GGCAACTTCGA----------------------------ATAAGTTTTAAGCCTCT-------------------------------TAACTTTTCAGGCCGTCAACGAGATGCCCGTTTTTCTGAAAGGCGGACCAGCGGATAAGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................ACAGGCATAG--GCAAAAATGG..........................................................................................................................................................................................................................2011.0011000000
...............................................................................................................................AAAATGGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2811.0011000000
........................................................................................................................................................................................................................................................................................................................................GAAAGGCGGACCAGCGGATAAGAT2411.0010000100
.......................................................................................................................TAG--GCAAAAATGGCTCTAC....................................................................................................................................................................................................................1911.0011000000
.................................................................................................................................................................................................................................................................................................................GTCAACGAGATGCCCGTTTTTCTGAA.....................2611.0010000100
..........................................................................................................................................................................................................................................................................................................................................AAGGCGGACCAGCGGATA....1811.0011000000
....................................................................................................................................GGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2311.0011000000
............................................................................................................................................................................................................................................................................................................................................GGCGGACCAGCGGATAAG..1811.0011000000
...............................................................................................................................AAAATGGCTCTACCCGATGGACTTT........................................................................................................................................................................................................2511.0011000000
..................................................................................................................AGGCATAG--GCAAAAATGGCTCTACCCG.................................................................................................................................................................................................................2711.0011000000
........................................................................................................................................................................................................................................................................................................................AGATGCCCGTTTTTCTGAAAGGCGGACC............2811.0010000100
...........................................................................................................................................................................................................................................................................................................................TGCCCGTTTTTCTGAAAGG..................1911.0011000000
.................................................................................................................................................................................................................................................................................................................................TTTTTCTGAAAGGCGGACCA...........2011.0010000100
.............................................................................................................................................................................................................................................................................................................GGCCGTCAACGAGATGCCC................................1911.0011000000
................................................................................................................................................................................................................................................................................................................................GTTTTTCTGAAAGGCGGAC.............1911.0010000100
..................................................................................................................................ATGGCTCTACCCGATGGACTTTCCA.....................................................................................................................................................................................................2511.0011000000
............................................................................................................................................................................................................................................................................................................AGGCCGTCAACGAGATGCCC................................2011.0011000000
..........................................................................................................................................ACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2011.0011000000
.................................................................................................................................AATGGCTCTACCCGATGGACTTTCCAACA..................................................................................................................................................................................................2911.0011000000
..........................................................................................................................................................AACAAAATGAAGGTTTTCC...................................................................................................................................................................................1911.0011000000
................................................................................................................................................................................................................................................................................................................................GTTTTTCTGAAAGGCGGACCAGCGGATA....2811.0011000000
.............................................................................................................................................................................................................................................................................................................GGCCGTCAACGAGATGCCCGT..............................2111.0010000100
.............................................................................................................................................................................................................................................................................................................GGCCGTCAACGAGATGCC.................................1811.0011000000
..................................................................................................................................................GACTTTCCAACAAAATGAA...........................................................................................................................................................................................1911.0011000000

Generated: 05/17/2015 at 04:06 AM