ID:

dvi_10646

 Coordinate:

scaffold_12963:6442351-6442501 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.9 -13.8 -13.6 -13.5

Flybase annnotation

exon [dvir_GLEANR_1111:15]; CDS [Dvir\GJ11158-cds]; intron [Dvir\GJ11158-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATATATTTAATATATATTGTGTGCAGCACGCGTAGCTGAATTCTATTCTAGAGCAAAAGACGAACCGCGTGGTTTTCACACACACACAAACTGTTTACATATTATATCTATATTATAGGCAGCTACTTTGTAGATACGTCATTGACTAATACGCCCCGGGCAAACTTTTTGTTCTCTTTTTTCTATTTGAATCCTTGCAGATTGAACGATACGCTACGCGATAAGGACCAACAGGTTAGCAAGGATCTCG
*********************************************************.((.((....((((.((((..........((((((((((((.((((.......))))..)))))))....)))))))))))))...)).))******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 M028
head
 M061
embryo
 SRR060667
160_females_carcasses_total
 V053
head
 SRR060665
9_females_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060687
9_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060659
Argentina_testes_total
 SRR060664
9_males_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 SRR060681
Argx9_testes_total
 GSM1528803
follicle cells		 SRR060674
9x140_ovaries_total
 SRR060670
9_testes_total
 SRR060676
9xArg_ovaries_total
 SRR060682
9x140_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060678
9x140_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060656
9x160_ovaries_total
........................................................................................................................................................................................................................ACGCGATAAGGACCAACAG................ 19 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GAACGATACGCTACGCGATAAGGACC..................... 26 0 1 3.00 3 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GATTGAACGATACGCTACGCGATA........................... 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GACCAACAGGTTAGCAAGGAT.... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTTGTAGATGCATCATTGCC........................................................................................................ 20 3 20 1.15 23 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 8 1 3 3 0 2 2 1
............................................................................................................................................................................................................GAACGATACGCTACGCGATAAG......................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACGCGATAAGGACCAACAGGT.............. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AATTGAACGATACGCTACGCGATA........................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CTACGCGATAAGGACCAACA................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GATAAGGACCAACAGGTTAGC.......... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GACCAACAGGTTAGCAAG....... 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CGATAAGGACCAACAGGTTAGCA......... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACGATACGCTACGCGATAAG......................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGCTACGCGATAAGGACCA.................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CTATACGCTACGCGATAAGGACC..................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGATTGAACGATACGCTACGCG.............................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AGGACCAACAGGTTAGCAAG....... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACGCGATAAGGACCAACAGGTT............. 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACGCGATAAGGACCAACA................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TTGTAGATACGTCATTGACT....................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AATTGAACGATACGCTACGCGATAAG......................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................AAGACGAACCGCGTGGTTTTCA............................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGAACGATACGCTACGCGATAA.......................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AAATTGAACGATACGCTACGCGATAAGG........................ 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TCAACAGGTTAGCAAGGATCT.. 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GATACGCTACGCGATAAGGACCG.................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ACGCGATAAGGACCAACAGG............... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATTGAACGATACGCTACGCGATAAG......................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TACGCTACGCGATAAGGACC..................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................CTATATTATAGGCAGCTACTT.......................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AAATTGAACGATACGCTACG................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CTATTCTAGAGCAAAAGAC............................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................ATTGTGTGCAGCACGCGTAGC...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GATACGCTACGCGATAAGGA....................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGCTACGCGATAAGGACCAACAGGTT............. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AATTGAACGATACGCTACGCGAT............................ 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACGATACGCTACGCGATAAGGACC..................... 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GACCAACAGGTTAGCAAGGATCT.. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................GCTACTTTGTAGATACGTCATT........................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ACGATACGCTACGCGATAAGGAC...................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAAATTGAACGATACGCTACGC............................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AGACCAATACGCCCCGGACA........................................................................................ 20 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................TTTGTAGATGCCTCATTGCCT....................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................GAATACGCCCCGGGC......................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

ATATATAAATTATATATAACACACGTCGTGCGCATCGACTTAAGATAAGATCTCGTTTTCTGCTTGGCGCACCAAAAGTGTGTGTGTGTTTGACAAATGTATAATATAGATATAATATCCGTCGATGAAACATCTATGCAGTAACTGATTATGCGGGGCCCGTTTGAAAAACAAGAGAAAAAAGATAAACTTAGGAACGTCTAACTTGCTATGCGATGCGCTATTCCTGGTTGTCCAATCGTTCCTAGAGC
*******************************************************************************************************.((.((....((((.((((..........((((((((((((.((((.......))))..)))))))....)))))))))))))...)).))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR060666
160_males_carcasses_total
 SRR060668
160x9_males_carcasses_total
 SRR060669
160x9_females_carcasses_total
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 SRR060671
9x160_males_carcasses_total
 SRR060672
9x160_females_carcasses_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
 M028
head
 SRR060687
9_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 M027
male body		 SRR060664
9_males_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060679
140x9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 SRR060681
Argx9_testes_total
 V053
head
 SRR060675
140x9_ovaries_total
 SRR060661
160x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060676
9xArg_ovaries_total
 V047
embryo
 GSM1528803
follicle cells		 SRR1106729
mixed whole adult body
 SRR060677
Argx9_ovaries_total
 SRR060678
9x140_testes_total
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAAACGTT........ 21 2 1 317.00 317 127 36 32 38 12 8 14 5 8 5 5 6 7 4 4 3 2 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAAACGT......... 20 2 1 117.00 117 50 5 8 10 12 6 3 4 3 2 1 2 2 2 3 0 0 2 0 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAAACGTTA....... 22 3 2 84.50 169 68 22 16 12 5 13 10 3 1 5 2 3 1 3 1 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAAACG.......... 19 2 3 68.33 205 94 12 25 4 10 11 4 12 4 5 1 3 3 8 0 0 3 2 1 1 0 0 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................TTCCTGGTTGTCTAAACGTT........ 20 2 1 55.00 55 12 11 6 6 3 4 0 5 0 2 2 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........TAGATATAACACACCTCGT.............................................................................................................................................................................................................................. 19 2 4 33.00 132 20 6 5 1 23 3 4 11 24 3 0 6 5 2 0 10 1 4 3 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTCCTGGTTGTCTAAACGT......... 19 2 1 14.00 14 3 0 3 0 2 0 1 0 0 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCCTGGTTGTCTAAACGTT........ 19 2 4 14.00 56 14 2 3 9 1 2 2 1 1 2 10 0 0 2 6 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAAAC........... 18 2 13 6.69 87 36 7 12 0 6 5 2 3 0 5 2 2 1 2 1 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................................................................................................................................................TTCCTGGTTGTCTAAACGTTA....... 21 3 7 6.00 42 13 2 6 3 1 4 2 4 0 2 0 1 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GATTCCTGGTTGTCTAAACGTT........ 22 3 2 4.00 8 3 1 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........TAGATATAACACACCTCG............................................................................................................................................................................................................................... 18 2 7 2.71 19 0 1 0 0 5 0 1 2 6 1 0 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGATTGATTATGCGGCGCCC.......................................................................................... 20 3 3 2.00 6 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................................................GATTCCTGGTTGTCTAAACGT......... 21 3 2 2.00 4 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCCTGGTTGTCTAAACGT......... 18 2 8 1.88 15 1 1 1 0 4 2 0 3 0 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CCTGGTTGTCTAAACGTT........ 18 2 13 1.31 17 7 2 3 0 0 0 0 1 0 0 1 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTCCTGGTTGTCTAAACG.......... 18 2 18 1.17 21 8 0 1 0 2 0 1 5 0 3 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTGATTATGCGGCGCCC.......................................................................................... 18 2 6 1.17 7 0 0 0 1 0 0 0 1 3 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAAACGTC........ 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGATTCCTGGTTGTCCAAACGTTC....... 24 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CATTCCTGGTTGTCTAAACGTT........ 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAACCGT......... 20 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCCTGGTTGTCTAAACGTTC....... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAATCGTT........ 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CGATTCCTGGTTGTCTAAACGT......... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAACCGTT........ 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................AAGAGAAAAGGGATAAACTTAG......................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAATC........... 18 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GATTCCTGGTTGTCTAAACG.......... 20 3 11 0.73 8 2 1 1 0 0 0 0 1 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AGATATAACACACCTCGT.............................................................................................................................................................................................................................. 18 2 8 0.63 5 0 0 0 0 1 0 0 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTTGTTGTCTAAACGTT........ 21 3 13 0.38 5 0 1 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AATTCCTGGTTGTCTAAACGTT........ 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGGTGTCCCGTCGTT........ 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGATTGTCTAAACGTT........ 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGATGTCTAAACGTT........ 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................CTGCGTTACGCACCAAAAGT............................................................................................................................................................................ 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................ACTCCTGGTTGTCTAAACGTT........ 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........AGATATAACACACCTCGTTC............................................................................................................................................................................................................................ 20 3 11 0.18 2 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTGATTATGCGGCGCCCT......................................................................................... 19 3 20 0.15 3 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTTGTCTAAACATT........ 21 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CTTCCTGGTTGTCTAAACGTT........ 21 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTCGTTGTCTAAACGTT........ 21 3 7 0.14 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTGATTATGCGGCGCCC.......................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................ATTCCTGTTTGTCTAAACGTT........ 21 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ATTCGCTGCGGTATTCCTG...................... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................AACTTCTAACTTGGCATGC..................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................................................CATTCCTGGTTGTCTAAACG.......... 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CTTCCTGGTTGTCTAAACGT......... 20 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTCGATTCCTGGTTGTCTA.............. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATTCCTGGTGGTCTAAACG.......... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........TAGATATACCACACCTCGT.............................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:6442301-6442551 - dvi_10646 TATATATT--TAATATA-----TAT-------T--GTGTGCA--GCACGCGTAGC-----T-GAA----TTCTATTCTAGAG--CAAAAGACG--AACCGCGTGGT---TTTCAC-----ACACACAC-------------------------------------AA------------ACTGTTTACATATTAT-A-------TCTATATT---------ATAGGCAGCTACTTT-GTAG------------------ATAC-G-TCATTGACTAATACGCCCCGGGCAAA------------C--------T-------TT--------TT-GT-T---CTCTT-------TTTTC-TATTTGAATCC-TTGCAGATTGAACGATACGCTACGCGATAAGGACCAACAGGTTAGCAAGGATCTCG
droMoj3 scaffold_6500:25587805-25588071 - TATATA--TCT-----A-------T-------T--GTGTGTACAGCACGCGTAGTTCTATT-GAG---GTTCTATTCTAGAG--GAAAAGACG--AACCGCGTGGT---TTTTCA----CACGC---C--------------------------------C--ACAGACACACTTGCAAACTGTTTACATATTAT-ATT------CTATATT---------ATAGGCAGCTATATT-TCAG------------------ATAC-G-TCATTGACTAATACGCCCCGGGCAAA------------C--------G-------TT-----TT-CT-GC-T---CTGC---------TCTC-TCTCCGAATTCATTACAGATTGAACGACACGCTACGCGAGAAGGACCAACAGGCTAGCAGGGATCTCG
droGri2 scaffold_15252:9671578-9671855 - TATATA--TCA-ATAT------A-C-------T--GTGC--A--GCACGCGCATC-----T-GAA----TTCTATTCTAGAG--CAAAACAC---GACCGCGTGGT---TTTT----------GTCTTCGCGTATACAGCAAACACACACACACAGAACCAAACTG-------------ACTGTTTATATATTATTATACAATATATATATT---CTTCTTAT-------------AGTAG------------------ATAC-G-TCATTGAGTAATACGCCCCGGGCAAT---------------------------------------CT-GC-TCTTTT--CTGCTTTGCTCTTAT------GTCCATTACAGATTGAACGATACGCTACGCGAAAAGGATCAACAGGTTGGCAAGGATCTCG
droWil2 scf2_1100000004585:1124551-1124764 - TAAGTATT--T-------------TTGTAGGCAACGCGTGT-----------AGC-----AGCAAATAGTTCTATTCT-CGA----CAAAAGC--GACCGCGTGGT---TTTGAA-----AAT----T--------------------------------C--CCATCTAT----------------------------------------------------------------------T-----------------ATAG-GACCAT---------TGCCCCTGAAATTTC-----TCATTCGGAATATA-----AT-TATATCAA--TT-GT---------T-------TTTTC-TTTTTTTATTT-TTATAGATTGAACGACACTCTACGCGAGAAGGAGCAGCAAGTTAGCAAGGATCTCG
dp5 4_group3:2743569-2743778 - CCTACA--CGT-----ATTGTGTGTTGGAGGA---------G--ACACGCGCTG------AGCGA----TTCTAT-CTATACAACGCAACA-G--AACCGCGTGGT---TTTTCA-----AATA---------------------------------------------------------------------------AAACATA--TACTCTTTTCCCTAC-------------AG---T-----------------CCAT-G-CCATTGAATAACACGACCCTGAACAT----------------------------------------C-GCCTATTTT--T---------------------TAT-TTGCAGATTGAACGACACGCTACGCGAGAAGGAGCAACAGGTTAGCCAGGATCTCG
droPer2 scaffold_1:4228871-4229080 - CCTACA--CGT-----ATTGTGTGTTGGAGGA---------G--ACACGCGCTG------AGCGA----TTCTAT-CTATACAACGCAACA-G--AACCGCGTGGT---TTTTCA-----AATA---------------------------------------------------------------------------AAACATA--TACTCTTTTCCCTAC-------------AG---C-----------------CCAT-G-CCATTGAATAACACGACCCTGAACAT----------------------------------------C-GCCTATTTT--T---------------------TAT-TTGCAGATTGAACGACACGCTACGCGAGAAGGAGCAACAGGTTAGCCAGGATCTCG
droAna3 scaffold_12916:10006700-10006897 - TATT---------GATC-----T-T-------T--GTGTGGACC------GACC------A-GAAA---TCCCAT-CTATAT----CAGCAAGAAAACCGCGTGGT---TTTCAC-----ACTGTCCC-------------------------------------GAATACA------------------------------------CACTAT---------------------------TGCCAGTCACAAGT-A-TAATAGT-CC--------ATGTGCCCCCCTA-----------------------------AC-TG-----AC-CA-TC-T---CTC-----------------------TAT-TTGCAGATTGAACGACACTCTACGCGAAAAGGAGCAACAGGTTAGTAAGGATCTCG
droBip1 scf7180000396580:1027040-1027235 + TATA---------GATC-----T-T-------T--GTGTGGACC------GAACC-----A-AAA----TCCCAT-CTATAC----CAGCAAGA-AACCGCGTGGT---TTTCAC-----ACTGTCCC-------------------------------------GAATACA------------------------------------TACTAT---------------------------TGCCAGTTCC--------------------AAGTCATACAGCCCGAACGCC------------C--------TTCTAAC-TG-----AC-CA-TC-T---CT------------------------CTT-TTGCAGATTGAACGACACTCTACGCGAAAAGGAGCAACAGGTTAGCAAGGATCTCG
droKik1 scf7180000302643:706843-707006 - C--------------------------------------------------------------------------------------AGCAAG--AACCGCGTGGT---TTTCAA-----AGTGTCTC--------------------------------T--CCATATAT---------------------TA-----------------T--ATTCCC------------------------CAGTCACGAGTCATTTATT-G-CCATTGAA----ATACCCCT---------------------------------C-TTAACAAA--CCACT-T---CTA-T---------------------ACT-TTGCAGATTGAACGACACGCTACTCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droFic1 scf7180000453842:1085959-1086156 - GAT--CTTT-TAAGATC-----T-C-------T--GTGCGAACG------GAATC-----T-ATA----GTCTAT-CTATAC----CAGCAGG--AACCGCGTGGT---TTTCACACCACACTGTCTT--------------------------------C--ACAAA---------------------------------------------------------------------------------------------------CATTGAATAACGTGCCCCTGAAAACTGAAAACTCAAAC--------G-------C-------T-CC-GC-T---CTC-----------------------TAA-TTTCAGATTGAACGACACGCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droEle1 scf7180000491273:59429-59626 - T----CTT--TTAGATC-----T-C-------T--GTGTGGACC------AAATC--T--A-GATA----TCTAT-CTATAC----CAGCAGG--AACCGCGTGGT---TTTCAC-----ACTGTCTA--------------------------------CAACCATATATA------------------------------------TA-T------------------------AT---T-----------------GCAT-G-TCATTGAATAACGTGCCCCTGAA-----------------------------TT-TTA----AC-CC-GC-T---CTAT----------------------TTT-TTTTAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droRho1 scf7180000779577:62401-62593 - GAGATCTT--TTAGATC-----T-C-------T--GTGTGGACC--AAGCAAAT------A-GCAA----TCTAT-CTATAT----CAGCAGG--AACCGCGTGGT---TTTCAC-----ACTGTCTT--------------------------------C--ACATATAT----------------------------------------------------------------------T-----------------GCGT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-T----A-AC-CC-GC-T---CTA------------------------TT-TTCCAGATTGAACGACACACTGCGCGATAAGGAGCAACAAGTTAGCAAGGATCTCG
droBia1 scf7180000302261:597333-597506 + CT---------------------------------------AGC------GTAT------A-GAAA----TCTAT-CTATAC----CAGCGGG--AACCGCGTGGT---CTTCAC-----ACTGTCTT--------------------------------C--ACAAATACA------------------------------------C--------------------------------A-----------------CACT-G-CCATTGGATAACGTGCCCCTGAAAAA------------C-------------AC-T----A-AC-CC-CG-T---CCC-----------------------TTC-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAGCAGGTTAGCAAGGATCTCG
droTak1 scf7180000415704:369439-369612 - AAGA---------GATC-----T-C-------T-----------------------------GAA----TTCTAT-CTATAC----CATCAGG--AACCGCGTGGT---TTTCAC-----ACTGTCTT--------------------------------C--GCATA-AT-----------------------------------------------------------------CG---C-----------------ATAT-A-CCATTAAATAACGTGCCCCTGAAAAA--------------------------AC-TC-----AC-CC-GC-T---CTAC----------------------TTT-TTCCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droEug1 scf7180000409005:1044125-1044273 + AA-------------------------------------------------------------------------------------ACCAGG--AACCGCGTGGT---TTTCACA---CACTGTCTA--------------------------------CCACCAACTAT----------------------------------------------------------------------C-----------------TCTT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TT-----ACCCC-GC-T---CTA-----------------------TTT-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAGCAGGTTAGCAAGGATCTCG
dm3 chr2L:5154100-5154297 + GG--TCTT--TCAGATC-----T-C-------TACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTATGC----CATCAGG--AACCGCGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCATCCAC-----------------------------------------------------------------AG---T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TTAAAAAA--CC-GC-T---CTGTT---------------------TCC-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droSim2 2l:4967304-4967501 + GAGGTCTT--TCAGATC-----T-C-------TACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTACGC----CATCAGG--AACCGCGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCAGCCAT----------------------------------------------------------------------T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TTAAAAAA--CC-GC-T---CTCTT---------------------CTT-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droSec2 scaffold_5:3240534-3240731 + GAGGTCTT--TCAGATC-----T-C-------TACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTACGC----CATCAGG--AACCGCGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCAGCCAC----------------------------------------------------------------------T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TTAAAAAG--CC-GC-T---CTCTT---------------------CTT-TTTCAGGTTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droYak3 2L:10369972-10370172 - GAGGTCTT--TCAGATC-----T-C-------CACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTATAC----CAGCAGG--AACCGCGTGGTCGTCTTCAC-----ACTGTCTT--------------------------------C--CCATTCAC----------------------------------------------------------------------T-----------------GCAT-G-CCATTAAATAACGTGCCCCTGAA-----------------------------AC-TTAACAAA--CC-GC-T---CTGTA---------------------TTT-TTTCAGATTAAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG
droEre2 scaffold_4929:5235250-5235444 + GAGGTCTT--TCAGATC-----T-C-------TTCGCGTGTACG------GAAT------A-GAAC----TTGGT-CTATAC----CATC-GG--AACCGCGTGGT---CTTCAC-----ACTGTCTA--------------------------------C--CCATCGAC----------------------------------------------------------------------T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------ACTTTAACAAA--CC-GC-T---CTG------------------------TT-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TATATATT--TAATATA-----TAT-------T--GTGTGCA--GCACGCGTAGC-----T-GAA----TTCTATTCTAGAG--CAAAAGACG--AACCGCGTGGT---TTTCAC-----ACACACAC-------------------------------------AA------------ACTGTTTACATATTAT-A-------TCTATATT---------ATAGGCAGCTACTTT-GTAG------------------ATAC-G-TCATTGACTAATACGCCCCGGGCAAA------------C--------T-------TT--------TT-GT-T---CTCTT-------TTTTC-TATTTGAATCC-TTGCAGATTGAACGATACGCTACGCGATAAGGACCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................ACGCGATAAGGACCAACAG................1913.003030000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GAACGATACGCTACGCGATAAGGACC.....................2613.003011000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GATTGAACGATACGCTACGCGATA...........................2412.002000000000000000000000000000000000000000000000000000000000000200
..................................................................................................................................................................................................................................................................................................................................................................................................................GACCAACAGGTTAGCAAGGAT....2112.002002000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GAACGATACGCTACGCGATAAG.........................2211.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACGCGATAAGGACCAACAGGT..............2111.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CTACGCGATAAGGACCAACA.................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGACCAACAGGTTAGC..........2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GACCAACAGGTTAGCAAG.......1811.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CGATAAGGACCAACAGGTTAGCA.........2311.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGATACGCTACGCGATAAG.........................2011.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CGCTACGCGATAAGGACCA....................1911.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGATTGAACGATACGCTACGCG..............................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCAACAGGTTAGCAAG.......2011.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACGCGATAAGGACCAACAGGTT.............2211.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACGCGATAAGGACCAACA.................1811.001010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TT-GTAG------------------ATAC-G-TCATTGACT........................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................AAGACG--AACCGCGTGGT---TTTCA.........................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGAACGATACGCTACGCGATAA..........................2211.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GATACGCTACGCGATAAGGACCG....................2311.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACGCGATAAGGACCAACAGG...............2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGAACGATACGCTACGCGATAAG.........................2511.001000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TACGCTACGCGATAAGGACC.....................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................CTATATT---------ATAGGCAGCTACTT................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................CTATTCTAGAG--CAAAAGAC...............................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
.......................AT-------T--GTGTGCA--GCACGCGTAGC-----...............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
................................................................................................................................................................................................................................................................................................................................................................................................GATACGCTACGCGATAAGGA.......................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CGCTACGCGATAAGGACCAACAGGTT.............2611.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGATACGCTACGCGATAAGGACC.....................2411.001000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GACCAACAGGTTAGCAAGGATCT..2311.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................GCTACTTT-GTAG------------------ATAC-G-TCATT............................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGATACGCTACGCGATAAGGAC......................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TATATA--TCT-----A-------T-------T--GTGTGTACAGCACGCGTAGTTCTATT-GAG---GTTCTATTCTAGAG--GAAAAGACG--AACCGCGTGGT---TTTTCA----CACGC---C--------------------------------C--ACAGACACACTTGCAAACTGTTTACATATTAT-ATT------CTATATT---------ATAGGCAGCTATATT-TCAG------------------ATAC-G-TCATTGACTAATACGCCCCGGGCAAA------------C--------G-------TT-----TT-CT-GC-T---CTGC---------TCTC-TCTCCGAATTCATTACAGATTGAACGACACGCTACGCGAGAAGGACCAACAGGCTAGCAGGGATCTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................GACACGCTACGCGAGAAGGACCA....................2311.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................ACGCTACGCGAGAAGGACCAACAGG...............2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................AGATTGAACGACACGCTACGCG..............................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................CACGCTACGCGAGAAGGACCAACA.................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................GACCAACAGGCTAGCAGGGAT....2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................AACGACACGCTACGCGAGAAGGACC.....................2511.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACGCTACGCGAGAAGGACC.....................2311.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGAACGACACGCTACGCGAGAAGGAC......................2711.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................TACGCGAGAAGGACCAACAG................2011.001000100
....................................................................................................................................................................................................................................................................................................................................................................................................CGCTACGCGAGAAGGACCA....................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................CAGATTGAACGACACGCTACG................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................GACCAACAGGCTAGCAGGGATCT..2311.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................AACGACACGCTACGCGAGAAGGAC......................2411.001000010
droGri2
TATATA--TCA-ATAT------A-C-------T--GTGC--A--GCACGCGCATC-----T-GAA----TTCTATTCTAGAG--CAAAACAC---GACCGCGTGGT---TTTT----------GTCTTCGCGTATACAGCAAACACACACACACAGAACCAAACTG-------------ACTGTTTATATATTATTATACAATATATATATT---CTTCTTAT-------------AGTAG------------------ATAC-G-TCATTGAGTAATACGCCCCGGGCAAT---------------------------------------CT-GC-TCTTTT--CTGCTTTGCTCTTAT------GTCCATTACAGATTGAACGATACGCTACGCGAAAAGGATCAACAGGTTGGCAAGGATCTCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................GAACGATACGCTACGCGAAAAG.........................2211.00110
droWil2
TAAGTATT--T-------------TTGTAGGCAACGCGTGT-----------AGC-----AGCAAATAGTTCTATTCT-CGA----CAAAAGC--GACCGCGTGGT---TTTGAA-----AAT----T--------------------------------C--CCATCTAT----------------------------------------------------------------------T-----------------ATAG-GACCAT---------TGCCCCTGAAATTTC-----TCATTCGGAATATA-----AT-TATATCAA--TT-GT---------T-------TTTTC-TTTTTTTATTT-TTATAGATTGAACGACACTCTACGCGAGAAGGAGCAGCAAGTTAGCAAGGATCTCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................CTCTACGCGAGAAGGAGCAGCAAGTTAGC..........2913.00300300
..................................................................................................................................................................................................................................................................................................................................................................................................CACTCTACGCGAGAAGGAGC.....................2012.00200110
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAGCAAGTTAGCAAGGATCT..2712.00200200
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACTCTACGCGAGAAGGAGCAGC..................2611.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAGCAAGTTAGC..........1911.00100010
............................................................................................................................................................................................................................................................................................................................................................................................GAACGACACTCTACGCGAGAAGGAGC.....................2611.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................CTCTACGCGAGAAGGAGCAGC..................2111.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAAGTTAGCAAGGATCT..2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................AGATTGAACGACACTCTACGCGG.............................2311.00110000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTACGCGAGAAGGAGC.....................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGAGCAGCAAGTTAGCAAGG......2411.00101000
........................................................................................................................................................................................................................................................................................................................................................................................GATTGAACGACACTCTACGCGAGAAGG........................2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................AGATTGAACGACACTCTACGCGAGA...........................2511.00110000
..................................................................................................................................................................................................................................................................................................................................................................................................CACTCTACGCGAGAAGGAGCAGC..................2311.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGTTAGCAAGGATCT..1911.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................CTCTACGCGAGAAGGAGCAGCAAGTT.............2611.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................TGAACGACACTCTACGCGAGAAGGAGCA....................2811.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACTCTACGCGAGAAGGAGC.....................2311.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................ACGCGAGAAGGAGCAGCAAGTT.............2211.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................CTCTACGCGAGAAGGAGCAGCAAGTTAG...........2811.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGGAGCAGCAAGTTAGCAAGG......2511.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGAACGACACTCTACGCGA.............................2111.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAGCAAGTTAGCAAGG......2311.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGAACGACACTCTACGCGAGA...........................2311.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................CTACGCGAGAAGGAGCAGCAA................2111.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................ACGACACTCTACGCGAGAAGGAGC.....................2411.00100100
dp5
CCTACA--CGT-----ATTGTGTGTTGGAGGA---------G--ACACGCGCTG------AGCGA----TTCTAT-CTATACAACGCAACA-G--AACCGCGTGGT---TTTTCA-----AATA---------------------------------------------------------------------------AAACATA--TACTCTTTTCCCTAC-------------AG---T-----------------CCAT-G-CCATTGAATAACACGACCCTGAACAT----------------------------------------C-GCCTATTTT--T---------------------TAT-TTGCAGATTGAACGACACGCTACGCGAGAAGGAGCAACAGGTTAGCCAGGATCTCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAACAGGTTAGCCAGGAT....2513.0030110100000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGGTTAGCCAGGAT....2012.0020100100000
............................................................................................................................................................................................................................................................................................................................................................................................GAACGACACGCTACGCGAGAAGGAGC.....................2612.0020100100000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAACAGGTTAGCCAGG......2312.0020010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACAGGTTAGCCAGG......2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CGAGAAGGAGCAACAGGTTA............2011.0010000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGGTTAGCCAGGA.....1911.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAACAGGTTAGCCAG.......2211.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACGCTACGCGAGAAGGAGCA....................2011.0010000010000
................................................................................................................................................................................................................................................................................................................................................................................................GACACGCTACGCGAGAAGGAGC.....................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGAACGACACGCTACGCGAGAA..........................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAACAGGTTAGCCAGGAC....2511.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGAACGACACGCTACGCGAGAAGGAG......................2611.0010010000000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGACACGCTACGCGAGAAGGAGC.....................2411.0010000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGTTAGCCAGGATCT..1911.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGGTTAGCCAGGATCT..2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACAGGTTAGCCAGGATCT..2411.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAACAGGTTAGC..........1911.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................AACGACACGCTACGCGAGAAGGAGCA....................2611.0010000010000
droPer2
CCTACA--CGT-----ATTGTGTGTTGGAGGA---------G--ACACGCGCTG------AGCGA----TTCTAT-CTATACAACGCAACA-G--AACCGCGTGGT---TTTTCA-----AATA---------------------------------------------------------------------------AAACATA--TACTCTTTTCCCTAC-------------AG---C-----------------CCAT-G-CCATTGAATAACACGACCCTGAACAT----------------------------------------C-GCCTATTTT--T---------------------TAT-TTGCAGATTGAACGACACGCTACGCGAGAAGGAGCAACAGGTTAGCCAGGATCTCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGCAACAGGTTAGCCAGG......2311.001001000
................................................................................................................................................................................................................................................................................................................................................................................................GACACGCTACGCGAGAAGGAGC.....................2211.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................TGAACGACACGCTACGCGAGAAGGAGC.....................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................TGAACGACACGCTACGCGA.............................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................ACGACACGCTACGCGAGAAGGAGCAACA.................2811.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGAACGACACGCTACGCGA.............................2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................CACGCTACGCGAGAAGGAGC.....................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGGAGCAACAGGTT.............1811.001001000
droAna3
TATT---------GATC-----T-T-------T--GTGTGGACC------GACC------A-GAAA---TCCCAT-CTATAT----CAGCAAGAAAACCGCGTGGT---TTTCAC-----ACTGTCCC-------------------------------------GAATACA------------------------------------CACTAT---------------------------TGCCAGTCACAAGT-A-TAATAGT-CC--------ATGTGCCCCCCTA-----------------------------AC-TG-----AC-CA-TC-T---CTC-----------------------TAT-TTGCAGATTGAACGACACTCTACGCGAAAAGGAGCAACAGGTTAGTAAGGATCTCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAAGGAGCAACAGGTTAGTAAG.......2612.002000002
..................................................................................................................................................................................................................................................................................................................................................................................................CACTCTACGCGAAAAGGAGC.....................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................C-----------------------TAT-TTGCAGATTGAACGACACTC....................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................CACTCTACGCGAAAAGGAG......................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACAGGTTAGTAAGG......2011.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACAGGTTAGTAAGGATCT..2411.001000001
............................................................................................................................................................................................................................................................................................................................................................................................GAACGACACTCTACGCGAAAAGGAGC.....................2611.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................AGATTGAACGACACTCTACGCGAAA...........................2511.001000001
droBip1
TATA---------GATC-----T-T-------T--GTGTGGACC------GAACC-----A-AAA----TCCCAT-CTATAC----CAGCAAGA-AACCGCGTGGT---TTTCAC-----ACTGTCCC-------------------------------------GAATACA------------------------------------TACTAT---------------------------TGCCAGTTCC--------------------AAGTCATACAGCCCGAACGCC------------C--------TTCTAAC-TG-----AC-CA-TC-T---CT------------------------CTT-TTGCAGATTGAACGACACTCTACGCGAAAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
droKik1
C--------------------------------------------------------------------------------------AGCAAG--AACCGCGTGGT---TTTCAA-----AGTGTCTC--------------------------------T--CCATATAT---------------------TA-----------------T--ATTCCC------------------------CAGTCACGAGTCATTTATT-G-CCATTGAA----ATACCCCT---------------------------------C-TTAACAAA--CCACT-T---CTA-T---------------------ACT-TTGCAGATTGAACGACACGCTACTCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
droFic1
GAT--CTTT-TAAGATC-----T-C-------T--GTGCGAACG------GAATC-----T-ATA----GTCTAT-CTATAC----CAGCAGG--AACCGCGTGGT---TTTCACACCACACTGTCTT--------------------------------C--ACAAA---------------------------------------------------------------------------------------------------CATTGAATAACGTGCCCCTGAAAACTGAAAACTCAAAC--------G-------C-------T-CC-GC-T---CTC-----------------------TAA-TTTCAGATTGAACGACACGCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
droEle1
T----CTT--TTAGATC-----T-C-------T--GTGTGGACC------AAATC--T--A-GATA----TCTAT-CTATAC----CAGCAGG--AACCGCGTGGT---TTTCAC-----ACTGTCTA--------------------------------CAACCATATATA------------------------------------TA-T------------------------AT---T-----------------GCAT-G-TCATTGAATAACGTGCCCCTGAA-----------------------------TT-TTA----AC-CC-GC-T---CTAT----------------------TTT-TTTTAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
droRho1
GAGATCTT--TTAGATC-----T-C-------T--GTGTGGACC--AAGCAAAT------A-GCAA----TCTAT-CTATAT----CAGCAGG--AACCGCGTGGT---TTTCAC-----ACTGTCTT--------------------------------C--ACATATAT----------------------------------------------------------------------T-----------------GCGT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-T----A-AC-CC-GC-T---CTA------------------------TT-TTCCAGATTGAACGACACACTGCGCGATAAGGAGCAACAAGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
droBia1
CT---------------------------------------AGC------GTAT------A-GAAA----TCTAT-CTATAC----CAGCGGG--AACCGCGTGGT---CTTCAC-----ACTGTCTT--------------------------------C--ACAAATACA------------------------------------C--------------------------------A-----------------CACT-G-CCATTGGATAACGTGCCCCTGAAAAA------------C-------------AC-T----A-AC-CC-CG-T---CCC-----------------------TTC-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAGCAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
droTak1
AAGA---------GATC-----T-C-------T-----------------------------GAA----TTCTAT-CTATAC----CATCAGG--AACCGCGTGGT---TTTCAC-----ACTGTCTT--------------------------------C--GCATA-AT-----------------------------------------------------------------CG---C-----------------ATAT-A-CCATTAAATAACGTGCCCCTGAAAAA--------------------------AC-TC-----AC-CC-GC-T---CTAC----------------------TTT-TTCCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
droEug1
AA-------------------------------------------------------------------------------------ACCAGG--AACCGCGTGGT---TTTCACA---CACTGTCTA--------------------------------CCACCAACTAT----------------------------------------------------------------------C-----------------TCTT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TT-----ACCCC-GC-T---CTA-----------------------TTT-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAGCAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotal
No Reads
dm3
GG--TCTT--TCAGATC-----T-C-------TACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTATGC----CATCAGG--AACCGCGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCATCCAC-----------------------------------------------------------------AG---T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TTAAAAAA--CC-GC-T---CTGTT---------------------TCC-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGGTTAGCAAGG......1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAGC.....................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCGCGATAAGGAGCAACA.................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACTCTGCGCGATAAGGA.......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCGCGATAAGGAGCAACAG................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGCAAGG......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGCAACAGGTTAGCAAGGATA...2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGGTTAGCAAGGA.....1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GAACGACACTCTGCGCGAT............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TT--TCAGATC-----T-C-------TACGCGTGTA.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TAAGGAGCAACAGGTTAGCA.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAG......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACTCTGCGCGATAAGGAGCTTG..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGCAAGGA.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................AA--CC-GC-T---CTGTT---------------------TCC-TTTCAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACTCTGCGCGATAAGGAGCAACAG................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGGTTAGCAAGGAT....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................CGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCATCC..................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAACAGGTTAGCAAG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TAAGGAGCAACAGGTTAGCAAGGATC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGAGCAACAGGTTAGCAAGGATCT..2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACTCTGCGCGATAAGGAGCAAC..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCGCGATAAGGAGCA....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGA.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGGTTAGCAAGGATC...1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ACACTCTGCGCGATAAGGAGCAACA.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TATGC----CATCAGG--AACCGCGTGGT---CT............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................CTATGC----CATCAGG--AACCGCGT....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGCAAG.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................GAACGACACTCTGCGCGATAAGGAGC.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCGATAAGGAGCAACAGGTT.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCGATAAGGAGCAACA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................ATCAGG--AACCGCGTGGT---CTTC..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAATC....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAGCAAC..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ACACTCTGCGCGATAAGGAGCA....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGCAACAGGTTAGCAA........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCGATAAGGAGCAACAGGTTAGC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................GTGTACG------GAAT------A-GAAC----TTGGT-...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAACAGGTTAGCAAGGA.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ACACTCTGCGCGATAAGGAGCAACAGGTT.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGCGATAAGGAGCAA...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CACTCTGCGCGATAAGGA.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................CCGCGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCAT....................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACAGGTTAGCAAGG......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GATTGAACGACACTCTGCGCGA.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACTCTGCGCGATAAGGAGCA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................C----CATCAGG--AACCGCGTGGT---CTT...........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGGTTAGCAAGCG.....1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................CTGTCTC--------------------------------C--CCATCCAC-----------------------------------------------------------------CC---..........................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAGGTCTT--TCAGATC-----T-C-------TACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTACGC----CATCAGG--AACCGCGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCAGCCAT----------------------------------------------------------------------T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TTAAAAAA--CC-GC-T---CTCTT---------------------CTT-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACTCTGCGCGATAAGGAG......................2213.00300300000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAGCAACAG................2712.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTGAACGACACTCTGCGCGATAAGG........................2512.00220000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGAACGACACTCTGCGCGATAAGGA.......................2712.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGGTTAGCAAGGATCTCG2411.00100001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAGC.....................2211.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGA.......................2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCGCGATAAGGAGCAACAGGTTAGCAAGG......2911.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGGTTAGCAAGGAT....1911.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGGTTAGCAAGGAT....1811.00100000000000100000
droSec2
GAGGTCTT--TCAGATC-----T-C-------TACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTACGC----CATCAGG--AACCGCGTGGT---CTTCAC-----ACTGTCTC--------------------------------C--CCAGCCAC----------------------------------------------------------------------T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------AC-TTAAAAAG--CC-GC-T---CTCTT---------------------CTT-TTTCAGGTTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACAGGTTAGCAAGGATCT..2411.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACAGGTTAGCAAGG......1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................TGAACGACACTCTGCGCGATAAGGA.......................2511.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTT.............1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................ACACTCTGCGCGATAAGGAGC.....................2111.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGGTTAGCAAGGATCT..2011.0010100
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAGC.....................2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGAGCAACAGGTTAGCAAGG......2411.0010010
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAG......................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGGTTAGCAAGG......1811.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGC..........2111.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGGTTAGCAAGGA.....1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................GTTGAACGACACTCTGCGCGATAAGGA.......................2711.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................TGAACGACACTCTGCGCGATAAG.........................2311.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGCAAGGA.....2611.0010100
............................................................................................................................................................................................................................................................................................................................................................................................GAACGACACTCTGCGCGATAAGGA.......................2411.0010010
............................................................................................................................................................................................................................................................................................................................................................................................GAACGACACTCTGCGCGATAAGG........................2311.0010010
droYak3
GAGGTCTT--TCAGATC-----T-C-------CACGCGTGTACG------GAAT------A-GAAC----TTGGT-CTATAC----CAGCAGG--AACCGCGTGGTCGTCTTCAC-----ACTGTCTT--------------------------------C--CCATTCAC----------------------------------------------------------------------T-----------------GCAT-G-CCATTAAATAACGTGCCCCTGAA-----------------------------AC-TTAACAAA--CC-GC-T---CTGTA---------------------TTT-TTTCAGATTAAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGCAACAGGTTAGCAAGGAT....2412.00200000020000
............................................................................................................................................................................................................................................................................................................................................................................................AAACGACACTCTGCGCGATAAGG........................2312.00220000000000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAGC.....................2212.00200200000000
........................................................................................................................................................................................................................................................................................................................................................................................GATTAAACGACACTCTGCGCGATAAG.........................2612.00200000000002
...................................................................................................................................................................................................................................................................................................................................................................................................ACTCTGCGCGATAAGGAGC.....................1911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATTAAACGACACTCTGCGC...............................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGGTTAGCAAGGAT....2011.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGCAAGGAT....2711.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAACAGGTTAGCAAG.......2011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGG........................1911.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................TAAGGAGCAACAGGTTAGCAAGGAT....2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGCAAGGAC....2711.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................TAAGGAGCAACAGGTTAGCAAGG......2311.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGA.......................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................TAAACGACACTCTGCGCGATAAGGA.......................2511.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TTAAACGACACTCTGCGCGATAAGGA.......................2611.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAG...........2011.00100000010000
.....................................GTGTACG------GAAT------A-GAAC----TTGGT-CTAT...........................................................................................................................................................................................................................................................................................................................................................2511.00100000000001
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACTCTGCGCGATAAGGA.......................2111.00100000100000
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGAGCAACA.................2611.00100000010000
droEre2
GAGGTCTT--TCAGATC-----T-C-------TTCGCGTGTACG------GAAT------A-GAAC----TTGGT-CTATAC----CATC-GG--AACCGCGTGGT---CTTCAC-----ACTGTCTA--------------------------------C--CCATCGAC----------------------------------------------------------------------T-----------------GCAT-G-CCATTGAATAACGTGCCCCTGAA-----------------------------ACTTTAACAAA--CC-GC-T---CTG------------------------TT-TTTCAGATTGAACGACACTCTGCGCGATAAGGAGCAACAGGTTAGCAAGGATCTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................GACACTCTGCGCGATAAGGA.......................2012.0020001100
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGGTTAGCAAGGAT....1812.0021000010
..................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACAGGTTAGCAAGG......1912.0020001100
..........................................................................................................................................................................................................................................................................................................................................................................................................GCGATAAGGAGCAACAGGTTAG...........2211.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGCAACAGGTTAGCAAGGATCT..2611.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGGTTAGCAAGG......1811.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTAGCAAGG......2511.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................GATTGAACGACACTCTGCGC...............................2011.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGAGCAACAGGTTAGC..........2011.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................ACACTCTGCGCGATAAGGAG......................2011.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTT.............1811.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGAACGACACTCTGCGCGATAAGG........................2611.0010001000
..............................................................................................................................................................................................................................................................................................................................................................................................................TAAGGAGCAACAGGTTAGCAAGG......2311.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGAACGACACTCTGCGC...............................1911.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................ACGACACTCTGCGCGATAAGGA.......................2211.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................CGACACTCTGCGCGATAAGGAGCAA...................2511.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGTTAGCAAGGATC...1811.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................GATAAGGAGCAACAGGTTA............1911.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGCAACAGGTTAGCAAGG......2211.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGAGCAACAGGTTAGCAAGG......2411.0010001000

Generated: 05/16/2015 at 08:04 PM