ID:

dvi_10631

 Coordinate:

scaffold_12963:6394597-6394747 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.8 -14.7 -14.6

Flybase annnotation

CDS [Dvir\GJ11172-cds]; exon [dvir_GLEANR_1114:4]; intron [Dvir\GJ11172-in]

Repeatable elements

NameClassFamilyStrand
A-richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACCTATTTTGCAACATTTTCTCGCTTTTGAATTTTGTGTTTTGCTGTGTTTATTTTGTTGCGTATTTGATTTGTGTATTACTTTATTTTTTTTGTTTGGTTCTCAAAATTTGATTCGTCCGCCCATTCTAACACTTCATCACAACTGACAACCCCAAGAGCCGCCGGCATATGTTTTAAATATTCTAGAACCCTTTCCAGGTTAACAGATCTGCGCCTCCGGCTGCAATCGCTGCGTCGTCTCTCCGGCA
**************************************************................................................((((((..((((((((..(((..(((..((((.........(((....)))........)))).....)))..)))..)))))).))..))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528803
follicle cells		 SRR060677
Argx9_ovaries_total
 M047
female body
 SRR060679
140x9_testes_total
 M028
head
 SRR060676
9xArg_ovaries_total
 M061
embryo
 SRR060655
9x160_testes_total
 SRR060668
160x9_males_carcasses_total
 SRR060670
9_testes_total
 SRR060675
140x9_ovaries_total
 SRR060683
160_testes_total
 SRR060688
160_ovaries_total
 SRR060689
160x9_testes_total
 SRR1106729
mixed whole adult body
 V047
embryo
 V116
male body		 SRR1106730
embryo_16-30h
 SRR060659
Argentina_testes_total
 V053
head
.....................................................................................................................................................................................................................................ACGCTGCGTCGTCTCTCCGGC. 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CAGATCTGCGCCTCCGGCTGC........................ 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGCAATCGCTGCGTCGTCTCTCCGGC. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GGTTAACAGATCTGCGCCT................................ 19 0 1 2.00 2 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................TTTATTTTTTTTGTTTGGTTCTCAAAAT............................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................TGGTTCTCAAAATTTGATTCGTCCGC................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACAGATCTGCGCCTCCGGC........................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................ATCTGCGCCTCCGGCTGCAAT..................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GACAGATCTGCGCCTCCGGCT.......................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TGCAATCGCTGCGGCGTCTCTCCGGC. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTAACAGATCTGCGCCTCCGGCTGCA....................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTAACAGATCTGCGCCTCCGGCTGC........................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCCAGGTTAACAGATCTGC.................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................TGAATTTTGTGTTTTGCTGTG.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................TTTATTTTGTTGCGTATTTGATTTGTG............................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................TATTTGATTTGTGTATTACTTTA..................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAACAGATCTGCGCCTCCGGC........................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................TCTCGCTTTTGAATTTTGTGTTTTGC.............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTGATTCGTCCGCCCATTCTAAC...................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................TGCGTATTTGATTTGTGTATTACTTTAT.................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACAGATCTGCGCCTCCGGCTGC........................ 23 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AAAGAACCCTTTCCAGGTTAACAG.......................................... 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................TGATTCGTCCGCCCATTCTAACACT................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTGACAGATCTGCGCCTCCG............................. 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................AGATCTGCGCCTCCGGCTGCA....................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................TTCTCGCTTTTGAATTTTGTGTTTTGC.............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGATCTGCGCCTCCGGCTGC........................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTTCCAGGTTGACAGATCTGCGCCT................................ 25 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................CTCCGGCTGCAATCGCTGCGTCG........... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GCAATCGCTGCGTCGTCTCTCC.... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................TAACAGATCTGCGCCTCCGGCT.......................... 22 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................TATTGTTTTTGTTTAGTTCGCAAAA.............................................................................................................................................. 25 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AAGAGACACCGGCATATG............................................................................. 18 2 6 0.33 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
...........................................................................................................................................................................................................TGACAGATCTGCGCCT................................ 16 1 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................TGAACCTCCGGTTGCAAT..................... 18 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................ATACATTTTAAATATTCTAG.............................................................. 20 2 17 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GAAAGAACCCTTTCCAGGT................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTGGATAAAACGTTGTAAAAGAGCGAAAACTTAAAACACAAAACGACACAAATAAAACAACGCATAAACTAAACACATAATGAAATAAAAAAAACAAACCAAGAGTTTTAAACTAAGCAGGCGGGTAAGATTGTGAAGTAGTGTTGACTGTTGGGGTTCTCGGCGGCCGTATACAAAATTTATAAGATCTTGGGAAAGGTCCAATTGTCTAGACGCGGAGGCCGACGTTAGCGACGCAGCAGAGAGGCCGT
**************************************************................................................((((((..((((((((..(((..(((..((((.........(((....)))........)))).....)))..)))..)))))).))..))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
 SRR060686
Argx9_0-2h_embryos_total
 SRR060667
160_females_carcasses_total
..............................................................................................................................................................................................................GTCTAGACGCGGAGGCCGACG........................ 21 0 1 1.00 1 1 0 0 0 0
............................................................................................................TAAACTATGCAGTCGGGT............................................................................................................................. 18 2 4 0.25 1 0 1 0 0 0
..................................................................................................................................TTGTGGAGTACTGTTGAC....................................................................................................... 18 2 4 0.25 1 0 0 1 0 0
...............................................................................................................ACTATGCAGACGGGTAAG.......................................................................................................................... 18 2 8 0.13 1 0 0 0 1 0
...........GTGGTAGAAGAGCGGAAAC............................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:6394547-6394797 - dvi_10631 AA---------------------CCTAT------TTTGCAACATTT----TCTCGCTTT------TG---A----ATTTTGT--GTTTTGCTGTGTTT--ATTTT-GTTGCGTATTT------------GATT-TGTGTA-TTACTTTATTTTTTTTGTTTGGTTCTCAAAA-TTTGATTCGTCCGCCCATTCTAACACTTCATCACAACTGACAACCCCAAGAGCCGCCGGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGGTTAACAGATCTGCGCCTCCGGCTGCAATCGCTGCGTCGTCTCTCCGGCA
droMoj3 scaffold_6500:25539000-25539253 - AA-TT----------------------T--AGT-AT-TGCTTATTCCT---TTTGCTTATTATTGTATAAG----TTTTTGT--GT-TTGCTGTATTTTTCTTTTGTTTGCGTGTTT------------GATTTGTTGTTTTTACT-----------TTCTGGTACTCAAAA-TTTGATTCGTCCGCCCATTCTAACCCTTCATCAAAACTGACAAACTTAAGAGCCGCCAGCATATGTTTT-AAATATTCTAGAACACTTTCCAGGCTAACCGATCTTCGACTGCGGCTGCAATCCCTGCGCCGTCTATCCGGCA
droGri2 scaffold_15252:9622607-9622851 - TA---------------------TCAATTTATTTTTTGCAACATTTT---TTTTGCTT--------AAATA----TTTTTGT--GT-TTGCTGTTTTT--TTTTTTTTTGCGTATGT----------------TTGATTT-ATGTT-----------TTTTGGTACTCCAAAATT-TTTTCGTCCGCCCATTCTAACACTTCATCAAAACTGACAACGCCTAAAGCCGCCAGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGATTGACCGATCTCCGGCTACGTCTCCAATCCCTGCGCCGCCTCTCTGGCA
droWil2 scf2_1100000004585:1076273-1076511 - AT-----------------------------------C-AATTTTTGT--TTTTCGCTG------TA--------ATTTTGTATGT--TTTTTTT-------TAT-GTTGCGTATTAAA-TATTCTTTTTTTTTTGTTTT-CGTTT-----------GTTTGGTACACAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTTATAATCCAAAGAGCTGTAAGCAAATGTTTTCAAATACTCTAGAACACTTTCCAGATTAACCGATCTGCGACTCCGTCTGCAATCGCTACGTCGCCTCTCCGGCA
dp5 4_group3:2687725-2687958 - A---------------------------------------ACATTTGT---TTTGCCTA------TAAAGA-AT-ATTTTGT--GT-TTGCTGTT-------TTT-GTTGCGTATAC-A-TATATTTATTTTTTTGTGTT---AT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACCG-CAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCA
droPer2 scaffold_1:4178547-4178780 - A---------------------------------------ACATTTGT---TTTGCCTG------TAAAGA-AT-ATTTTGT--GT-TTGCTGTT-------TTT-GTTGCGTGTAC-A-TATATTTATTTTTTTGTGTT---AT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACC-CCAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCA
droAna3 scaffold_12916:9961268-9961505 - AT-----------------CG-ACCGAT---------CGAACATTTGT--TTTTGCCTT------TAAACA----CTTTTGT--GT--TGCCGTTT------TTT-GTTGCATATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTGACACCCACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGACTGTCTGGAA
droBip1 scf7180000396580:1066979-1067211 + C-----------------------CGAT---------CGAACATTTGT--TTTTGCCTT------TAAACA----CTTTTGT--GT--TGCCGTTT------TTT-GTTGCATATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAAGTGACACCGACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTCTCTGGAA
droKik1 scf7180000302643:664525-664794 - AG-TTATACAA-ACTCAATCGTACCGAT------CT-CGAACATTTGT--TTTTGCCTC------TACACAAACACTTTTGT--GT--TGCTGTT-------TTT-GTTGCGTATTT-ATTATATATTCTTTTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCCTCATCCAAACTGACCTCCCCAAGAGCC-GTTGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGCCTGCAATCCCTGCGCCGCCTAGCCGGCA
droFic1 scf7180000453842:1043794-1043994 - A---------------------------------------------------------------------------TTTTGT--GT--TGCTGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCGAACTTACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTATCCGGGA
droEle1 scf7180000491273:12940-13149 - A-----------------------------------------------T--------------------------TTTTTGT--GT--TGCTGTT-------TAT-GTTGCGTATAT-ATTATA----TTATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCAAAACCTACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCA
droRho1 scf7180000779577:11346-11571 - A---------------------------------------TCATTCGT--TTTTGCTTC------TACACAT---ACTTTGT--GT--TGCTGTT-------TTC-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACGTACACCACCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCA
droBia1 scf7180000302261:643585-643786 + A----------------------------------------------------------------------T---ATTTTGT--GT--TGCCGTT-------TTC-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAATCTTGAAG-ACCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGTCTCCAATCCCTGCGTCGCCTATCCGGCA
droTak1 scf7180000415704:325689-325931 - AA-CTATACAA--------------AAT---------CAATCATTCGT--TTTTGCCTC------TACACATAT-ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATAAACCACCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTGCAATCCCTGCGTCGTCTATCCGGTA
droEug1 scf7180000409005:1091100-1091357 + CAACTTTACAAGAATCAATCGTATCGAT---------CGATCATTCGTTTTTTTGCCTC------TACACAA---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTCCAATCCCTGCGTCGTCTATCCGGAA
dm3 chr2L:5204294-5204512 + A-----------------------------------------------TTTTTTGCCTC------TACACAT---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCA-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
droSim2 2l:5009111-5009329 + dsi_18258 A-----------------------------------------------TTTTTTGCCTC------TACACAT---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
droSec2 scaffold_5:3285418-3285636 + A-----------------------------------------------TTTTTTGCCTC------TACACAT---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA
droYak3 2L:10323099-10323327 - T-----------------------------------------------CTTTTTGCCTC------TACAAAA---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATATTGTTATAT--TATATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGCCTCCAATCCCTGCGTCGTCTATCCGGCA
droEre2 scaffold_4929:5282290-5282489 + A--------------------------------------------------------------------------ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCA-ACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
AA---------------------CCTAT------TTTGCAACATTT----TCTCGCTTT------TG---A----ATTTTGT--GTTTTGCTGTGTTT--ATTTT-GTTGCGTATTT------------GATT-TGTGTA-TTACTTTATTTTTTTTGTTTGGTTCTCAAAA-TTTGATTCGTCCGCCCATTCTAACACTTCATCACAACTGACAACCCCAAGAGCCGCCGGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGGTTAACAGATCTGCGCCTCCGGCTGCAATCGCTGCGTCGTCTCTCCGGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................CAGATCTGCGCCTCCGGCTGC........................2112.002020000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGCAATCGCTGCGTCGTCTCTCCGGC.2612.002000000000000000000000000000000000000000000000000000000000000002
.........................................................................................................................................................................................................................................................................GGTTAACAGATCTGCGCCT................................1912.002000001000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................TTTATTTTTTTTGTTTGGTTCTCAAAA-T..............................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................TGGTTCTCAAAA-TTTGATTCGTCCGC.................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AACAGATCTGCGCCTCCGGC...........................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ATCTGCGCCTCCGGCTGCAAT.....................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTAACAGATCTGCGCCTCCGGCTGCA.......................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTAACAGATCTGCGCCTCCGGCTGC........................2511.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCCAGGTTAACAGATCTGC....................................1911.001000000000000000000000000000001000000000000000000000000000000000
.................................................................TG---A----ATTTTGT--GTTTTGCTGTG.............................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................TTT--ATTTT-GTTGCGTATTT------------GATT-TGTG..................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................TATTT------------GATT-TGTGTA-TTACTTTA.......................................................................................................................................................................2311.001000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TAACAGATCTGCGCCTCCGGC...........................2111.001000000000000000000000000000000000000000000000000000000000001000
..................................................TCTCGCTTT------TG---A----ATTTTGT--GTTTTGC.................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................TTGATTCGTCCGCCCATTCTAAC.......................................................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................TGCGTATTT------------GATT-TGTGTA-TTACTTTAT......................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AACAGATCTGCGCCTCCGGCTGC........................2311.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TGATTCGTCCGCCCATTCTAACACT....................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AGATCTGCGCCTCCGGCTGCA.......................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................T----TCTCGCTTT------TG---A----ATTTTGT--GTTTTGC.................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AGATCTGCGCCTCCGGCTGC........................2011.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CTCCGGCTGCAATCGCTGCGTCG...........2311.001000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GCAATCGCTGCGTCGTCTCTCC....2211.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................TAACAGATCTGCGCCTCCGGCT..........................2211.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
AA-TT----------------------T--AGT-AT-TGCTTATTCCT---TTTGCTTATTATTGTATAAG----TTTTTGT--GT-TTGCTGTATTTTTCTTTTGTTTGCGTGTTT------------GATTTGTTGTTTTTACT-----------TTCTGGTACTCAAAA-TTTGATTCGTCCGCCCATTCTAACCCTTCATCAAAACTGACAAACTTAAGAGCCGCCAGCATATGTTTT-AAATATTCTAGAACACTTTCCAGGCTAACCGATCTTCGACTGCGGCTGCAATCCCTGCGCCGTCTATCCGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGCCGTCTATC.....1811.001100000
.................................................................................................................................................................................................................................................................................GATCTTCGACTGCGGCTGCA.......................2011.001000001
.......................................................................................................................................................................................................................................................................CAGGCTAACCGATCTTCGAC.................................2011.001100000
..................................................................................................................................ATTTGTTGTTTTTACT-----------TTCTG..........................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................AGAACACTTTCCAGGCTAACC...........................................2111.001100000
...............................................................................................................................................................................................................................................................................................GCTGCAATCCCTGCGCCGT..........1911.001100000
........................................................................................................................................................................................................................................................................................GACTGCGGCTGCAATCCCTGCGCC............2411.001100000
droGri2
TA---------------------TCAATTTATTTTTTGCAACATTTT---TTTTGCTT--------AAATA----TTTTTGT--GT-TTGCTGTTTTT--TTTTTTTTTGCGTATGT----------------TTGATTT-ATGTT-----------TTTTGGTACTCCAAAATT-TTTTCGTCCGCCCATTCTAACACTTCATCAAAACTGACAACGCCTAAAGCCGCCAGCATATGTTTT-AAATATTCTAGAACCCTTTCCAGATTGACCGATCTCCGGCTACGTCTCCAATCCCTGCGCCGCCTCTCTGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTAC..............................1811.00110
droWil2
AT-----------------------------------C-AATTTTTGT--TTTTCGCTG------TA--------ATTTTGTATGT--TTTTTTT-------TAT-GTTGCGTATTAAA-TATTCTTTTTTTTTTGTTTT-CGTTT-----------GTTTGGTACACAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTTATAATCCAAAGAGCTGTAAGCAAATGTTTTCAAATACTCTAGAACACTTTCCAGATTAACCGATCTGCGACTCCGTCTGCAATCGCTACGTCGCCTCTCCGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................TAACCGATCTGCGACTCCGTCTGCAAT.....................2713.00301110
...........................................................................................................................................................................................................................................................................TTAACCGATCTGCGACTCCGTCTGC........................2513.00300210
.................................................................................................................................................................................................................................................TCAAATACTCTAGAACACTTTCCAG..................................................2512.00220000
........................................................................................................................................................................................................................................................................................GACTCCGTCTGCAATCGCTACGTCG...........2512.00202000
.............................................................................................................................................................................................................................................................................AACCGATCTGCGACTCCGTCTGCAAT.....................2611.00100010
.........................................................................................................................................................................................................................................................................GATTAACCGATCTGCGACTCCGT............................2311.00110000
............................................................................................................................................................................................................................................................................TAACCGATCTGCGACTCCGTCT..........................2211.00110000
.................................................................................................................................................................................................................................................TCAAATACTCTAGAACACTTTCCAGATT...............................................2811.00110000
...............................................................................................................................................................................................................................................................ACACTTTCCAGATTAACCGATC.......................................2211.00100010
...........................................................................................................................................................................................................................................................................TTAACCGATCTGCGACTCCGTCTGCA.......................2611.00101000
.................................................................................................................................................................................................................................................................................GATCTGCGACTCCGTCTGCAAT.....................2211.00101000
....................................................................................................................................................................................................................................................................................................AATCGCTACGTCGCCTCTCCGGC.2311.00100010
..........................................................................................................................................................................................................................................................................................CTCCGTCTGCAATCGCTACGTCGC..........2411.00100100
.............................................................................................................................................................................................................................................................................................CGTCTGCAATCGCTACGTCGCCT........2311.00100010
.....................................................................................................................................................................................................................................................................................................ATCGCTACGTCGCCTCTCC....1911.00110000
..........................................................................................................................................................................................................................................................................ATTAACCGATCTGCGACTCC..............................2011.00110000
.......................................................................................................................................................................................................................................................................................................CGCTACGTCGCCTCTCCGGC.2011.00100010
............................................................................................................................................................................................................................................................................TAACCGATCTGCGACTCCGTCTGC........................2411.00100100
dp5
A---------------------------------------ACATTTGT---TTTGCCTA------TAAAGA-AT-ATTTTGT--GT-TTGCTGTT-------TTT-GTTGCGTATAC-A-TATATTTATTTTTTTGTGTT---AT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACCG-CAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGCCTCTCCGGC.2312.0020100001000
.........................................................................................................................................................................................................................................................................GATTGACCGATCTCCGTCTGCGTCTGC........................2711.0010100000000
..............................................................................................................................................................................................................................................TTTT-AAATGTTCTAGAACCC.........................................................2011.0010001000000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGTCTGCGTC...........................2011.0010000001000
..........................................ATTTGT---TTTGCCTA------TAAAGA-AT-ATTTTG...........................................................................................................................................................................................................................................2811.0010100000000
..................................................................................................................................................................................................................................................................................................GCAATCCCTGCGTCGCCTCTCCGGC.2511.0010100000000
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGCCTCTCCG...2111.0010100000000
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGCCTCTCCG...2011.0010100000000
...............................................................................................................................................................................................................................................................................CCGATCTCCGTCTGCGTCTGCAATCCCT.................2811.0010100000000
.................................................................................................................................................................................................................................................................CCTTTCCAGATTGACCGAT........................................1911.0010010000000
..........................................................................................................................................................................................................................................................................ATTGACCGATCTCCGTCTGCGT............................2211.0010010000000
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGCCTCTCCGGCA2311.0010100000000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGTCTGCGC............................1911.0010010000000
...........................................................................................................................................................................................................................................................................TTGACCGATCTCCGTCTGCGTCTGC........................2511.0010100000000
..............................................................................................................................................................................................................................................................................ACCGATCTCCGTCTGCGTCTG.........................2111.0010100000000
..................................................................................................................................................................................................................ATACACCG-CAAGAGCCGTTGGCA..................................................................................2311.0010000100000
.........................................................................T-ATTTTGT--GT-TTGCTGTT-------TT....................................................................................................................................................................................................................2011.0010000001000
droPer2
A---------------------------------------ACATTTGT---TTTGCCTG------TAAAGA-AT-ATTTTGT--GT-TTGCTGTT-------TTT-GTTGCGTGTAC-A-TATATTTATTTTTTTGTGTT---AT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCGAACATACACC-CCAAGAGCCGTTGGCAAATGTTTT-AAATGTTCTAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTGCAATCCCTGCGTCGCCTCTCCGGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................CTCCGTCTGCGTCTGCAATCCCTGC...............2514.004400000
................................................................................................................................................................................................................................................................................CGATCTCCGTCTGCGTCTGC........................2012.002200000
...................................................................................................................................................................................................................................................................................................CAATCCCTGCGTCGCCTCTCCGGC.2411.001010000
.........................................................................................................................................................................................................................................................................GATTGACCGATCTCCGTCTGCGTCT..........................2511.001010000
..........................................................................................................................................................................................................................................................................ATTGACCGATCTCCGTCTGCGTCTGCAA......................2811.001010000
................................................................................................................................................................................................................................................................................................CTGCAATCCCTGCGTCGCCTCTCCGGC.2711.001010000
..................................................................................................................................................................................................................................................................CTTTCCAGATTGACCGATCTCCGTCT................................2611.001100000
droAna3
AT-----------------CG-ACCGAT---------CGAACATTTGT--TTTTGCCTT------TAAACA----CTTTTGT--GT--TGCCGTTT------TTT-GTTGCATATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACTGACACCCACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGACTGTCTGGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................GGCTGCGTCTCCAATCCCTGCGC.............2312.002020000
............................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGTCTCCA.......................2511.001010000
............................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGTCT..........................2211.001001000
................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGCCGACT........2011.001010000
.................................................................................................................................................................................................................................................................................GATCTCCGGCTGCGTCTCC........................1911.001010000
......................................................................................................................................................................................................................................................................CCAGGTTGACCGATCTCCGG..................................2011.001010000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGC............................1911.001010000
.........................................................................................................................................................................................................................................................................GGTTGACCGATCTCCGGCTGC..............................2111.001010000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCC........................2311.001010000
......................................................................................................................................................................................................................................................................CCAGGTTGACCGATCTCCGGC.................................2111.001010000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTC...........................2011.001010000
........................................................................................................................................................................................................................................................................AGGTTGACCGATCTCCGGCTGC..............................2211.001010000
droBip1
C-----------------------CGAT---------CGAACATTTGT--TTTTGCCTT------TAAACA----CTTTTGT--GT--TGCCGTTT------TTT-GTTGCATATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAAGTGACACCGACAAGAGCC-TTGGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGGTTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTCTCTGGAASizeHit CountTotal NormTotal
No Reads
droKik1
AG-TTATACAA-ACTCAATCGTACCGAT------CT-CGAACATTTGT--TTTTGCCTC------TACACAAACACTTTTGT--GT--TGCTGTT-------TTT-GTTGCGTATTT-ATTATATATTCTTTTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCCTCATCCAAACTGACCTCCCCAAGAGCC-GTTGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGCCTGCAATCCCTGCGCCGCCTAGCCGGCASizeHit CountTotal NormTotal
No Reads
droFic1
A---------------------------------------------------------------------------TTTTGT--GT--TGCTGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCGAACTTACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTGCAATCCCTGCGCCGTCTATCCGGGASizeHit CountTotal NormTotal
No Reads
droEle1
A-----------------------------------------------T--------------------------TTTTTGT--GT--TGCTGTT-------TAT-GTTGCGTATAT-ATTATA----TTATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCAAAACCTACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCASizeHit CountTotal NormTotal
No Reads
droRho1
A---------------------------------------TCATTCGT--TTTTGCTTC------TACACAT---ACTTTGT--GT--TGCTGTT-------TTC-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACGTACACCACCAAGGGCC-TATGCAAATGTTTT-AAATGTTCCAGAACCCTTTCCAGATTGACCGATCTCCGTCTGCGTCTCCAATCCCTGCGCCGTCTATCCGGCASizeHit CountTotal NormTotal
No Reads
droBia1
A----------------------------------------------------------------------T---ATTTTGT--GT--TGCCGTT-------TTC-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAATCTTGAAG-ACCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGCCTGCGTCTCCAATCCCTGCGTCGCCTATCCGGCASizeHit CountTotal NormTotal
No Reads
droTak1
AA-CTATACAA--------------AAT---------CAATCATTCGT--TTTTGCCTC------TACACATAT-ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATAAACCACCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTGCAATCCCTGCGTCGTCTATCCGGTASizeHit CountTotal NormTotal
No Reads
droEug1
CAACTTTACAAGAATCAATCGTATCGAT---------CGATCATTCGTTTTTTTGCCTC------TACACAA---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTATT-----------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTTCATCCAAACATACACCGCCAAGGGCC-TATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGACTGCGTCTCCAATCCCTGCGTCGTCTATCCGGAASizeHit CountTotal NormTotal
No Reads
dm3
A-----------------------------------------------TTTTTTGCCTC------TACACAT---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCA-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................TGCTCCAGAACCCTTTCCAGATTGAC............................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
.....................................................................................................................................................................................................................CACCGCCAAGAGCA-CATGCAAATGTT............................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTATCCGGCA2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CCGCCAAGAGCA-CATGCAAATGTTT...........................................................................2512.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................................................................GTCTCCAATCCCTGCGTCGT..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
...........................................................................................................................................................................................................TCCAAACATACACCGCCAAGAGCA-CA......................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGC..............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CCTGCGTCGTCTATCCGGC.1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................T-AAATGCTCCAGAACCCTTTCCAGATT...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGG..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGT............................2011.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTAT......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................T-CTTTCGTCCGCCCATTCTAACCCTCCAT................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GATCTCCGGCTGCGTCTCCA.......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................TCTCCGGCTGCGTCTCCAATCCCTGCGT.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................AAGAGCA-CATGCAAATGTTTT-.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TTTT-AAATGCTCCAGAACCCTTTCCA...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TCCATCCAAACATACACCGCCAAGAGCA-CA......................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................TCTCCGGCTGCGTCTCCAATCC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................TTTTGTGTT-GTAT------------TTTTGGTACTC....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................ATTTTGT--GT--TGCCGTT-------TTT-G.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GATTGACCGATCTCCGGCTGCGTCT..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................................................................ATCTCCGGCTGCGTCTCCA.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CGTCTCCAATCCCTGCGTCGTCTATC.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CCCTGCGTCGTCTATCCGGC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CTGCGTCGTCTATCCGGCA1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTCGTCCGCCCATTCTAACCCTCCATC...............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................CAAGAGCA-CATGCAAATGTTTT-AAA......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCCCTGCGTCGTCTATCCGG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGCA2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................CCGGCTGCGTCTCCAATC....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CATTCTAACCCTCCATCCAAACATA.......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................T---ATTTTGT--GT--TGCCGTT-------TTT-G.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCCA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................CCAAACATACACCGCCAAGAGCA-CATGC...................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................T-------TTT-GTTGCGTATAT------------TATTTTGTGT.................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTTTCCAGATTGACCGATCTCCGGCTATC.............................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ACTCAAAA-TT-CTTTCGTCCGCCCATTCT..........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TT-CTTTCGTCCGCCCATTCTAACCC.....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GGCTGCGTCTCCAATCCCTGCGT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CTGCGTCGTCTATCCGGC.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGCA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................TTTTTGCCTC------TACACAT---ATTT.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................T------------TTTTGGTACTCAAAA-TT-CTTTCGTCC...................................................................................................................................2711.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTCTATCCGGCA2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................TCTCCAATCCCTGCGTCGTCTATCCGGCA2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTGACCGATCTCCGGCTGCGTCTCCAA......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AACATACACCGCCAAGAGCA-........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AAGAGCA-CATGCAAATGTTT...........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................CAAACATACACCGCCAAGAGCA-CATG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................CTCCAGAACCCTTTCCAGATTGACCGA.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ATCTCCGGCTGCGTCTCCAATCCCTGC...............2711.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAGAACCCTTTCCAGATTGAC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CACCGCCAAGAGCA-CATGCAAATGTTT...........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................AACCCTTTCCAGATTGACCG..........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................TGTGTT-GTAT------------TTTTGGTACTCAAAA-...............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AT---ATTTTGT--GT--TGCCGTT-------TTT-..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AGATTGACCGATCTCCGGCTGCGTCTC.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTATCCGG..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTGACCGATCTCCGGCTGC..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................T-AAATGCTCCAGAACCCTTTC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TGCGTCGTCTATCCGGCA1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................TCAAAA-TT-CTTTCGT.....................................................................................................................................1530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
droSim2
A-----------------------------------------------TTTTTTGCCTC------TACACAT---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGC.2214.00400400000000000000
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2313.00301200000000000000
..........................................................................................................................................................................................................................................................................ATTGACCGATCTCCGGCT................................1812.00200200000000000000
...................................................................................................................................................................................................................................................................TTTCCAGATTGACCGATCTCCGGCTG...............................2612.00200200000000000000
....................................................................................................................................................................................................................................................................................CTCCGGCTGCGTCTCCAATCCCTGCGT.............2711.00100100000000000000
...........................................................................................................................................................................................................................................................................................TGCGTCTCCAATCCCTGCGTCGT..........2311.00100100000000000000
.................................................................................................................................................................................................................................................................................................TCCAATCCCTGCGTCGTCTATCCGGCA2711.00100000000001000000
......................................................................................................................................................................................................................................................................CCAGATTGACCGATCTCCGGCTGC..............................2411.00100100000000000000
..................................................................................................................................................................................................................................................................................................CCAATCCCTGCGTCGTCTATCCGG..2411.00101000000000000000
..............................................................................................................................................................................................................................................................................................GTCTCCAATCCCTGCGTCGTCT........2211.00100000000000100000
......................................................................................................................................................................................TCCGCCCATTCTAACCCTCCA.................................................................................................................2111.00100001000000000000
............................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGC..............................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................................CCCTGCGTCGTCTATCCGGC.2011.00100100000000000000
..........................................................................................................................................................................................................................................................................ATTGACCGATCTCCGGCTGCGTCT..........................2411.00100100000000000000
............................................................................................................................................................................................................................................................................TGACCGATCTCCGGCTGCGTCTCC........................2411.00100000000000100000
........................................................................................................................................................................AAAA-TT-CTTTCGTCCGCCC...............................................................................................................................1911.00100100000000000000
....................................................................................................................................................................................................................................................................TTCCAGATTGACCGATCTCCGGCG................................2411.00100100000000000000
.................................................................................................................................................................................................................................................................................GATCTCCGGCTGCGTCTCCAATCCCT.................2611.00100010000000000000
droSec2
A-----------------------------------------------TTTTTTGCCTC------TACACAT---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGAGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCG...2111.0010001
..............................................................................................................................................................................................................................................................................................GTCTCCAATCCCTGCGTCGT..........2011.0010010
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2311.0010100
...........................................................................................................................................................................................................................................................................TTGACCGATCTCCGGCTGCGT............................2111.0010010
droYak3
T-----------------------------------------------CTTTTTGCCTC------TACAAAA---ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATATTGTTATAT--TATATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCAAACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGCCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................GCGCCTCCAATCCCTGCGTC............2012.00200100010000
................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTCTATCCGGC.2711.00100100000000
........................................................................................................................................................................................................................................................................................GGCTGCGCCTCCAATCCCTGCGTCGTC.........2711.00100100000000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGCCTC.........................2211.00100000010000
................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTC.........1911.00100100000000
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGC.2211.00100100000000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGCCTCC........................2311.00100100000000
................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGTCTA.......2111.00100000010000
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGCCTCCAATC....................2711.00101000000000
........................................................................................................................................................................................................................................................................................GGCTGCGCCTCCAATCCCTGCGTC............2411.00101000000000
.......................................................................................................................................................................................................................................................................CAGATTGACCGATCTCCGGCT................................2111.00100100000000
..........................................................................................................................................................................................................................................................................ATTGACCGATCTCCGGCTGCGC............................2211.00100000010000
.................................................................................................................................................................................................................................................T-AAATGCTCCAGAACCCTT.......................................................1911.00100100000000
............................................................................................GTT-------TTT-GTTGCGTATATTGTT...................................................................................................................................................................................................2111.00100100000000
droEre2
A--------------------------------------------------------------------------ATTTTGT--GT--TGCCGTT-------TTT-GTTGCGTATAT------------TATTTTGTGTT-GTAT------------TTTTGGTACTCAAAA-TT-CTTTCGTCCGCCCATTCTAACCCTCCATCCA-ACATACACCGCCAAGGGCC-CATGCAAATGTTTT-AAATGCTCCAGAACCCTTTCCAGATTGACCGATCTCCGGCTGCGTCTCCAATCCCTGCGTCGTCTATCCGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................GACCGATCTCCGGCTGCGTCTCC........................2312.0020000110
....................................................................................................................................................................................................................................................................................................AATCCCTGCGTCGTCTATCCGGC.2312.0020100100
................................................................................................................................................................................................................................................................................................CTCCAATCCCTGCGTCGT..........1811.0010100000
.....................................................................................................................................................................................................................................................................................................ATCCCTGCGTCGTCTATCCGGC.2211.0010000100
....................................................................................................................................................................................................................................................................TTCCAGATTGACCGATCTCC....................................2011.0010100000
.........................................................................................................................................................................................................................................................................GATTGACCGATCTCCGGCTGC..............................2111.0011000000

Generated: 05/19/2015 at 04:19 PM