dvi_10325

GGTGTAAAACAAACGTTCGTTGTTGAACTATACCTGTCACCTCAACAAAAAGCGGGTACGGACAAATTTTCGATTTTGACACTGATTATTAATTATTATATATGGGATAGGTAAACGTATAGTTTTTGGTTTGATTAACTTGATGGGAGTGGTTTAGTTTTATGTTTTTTTTTTGTTGTTTTTTTGGTAGTTGTGGCTGTCGACGTGCTTCTCTTTTAGTCGCGTTAACTTCTCTTTGAGCTTGAGAGACT ************************************************((((........(((....))).......))))......................................................................................................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060687 9_0-2h_embryos_total	SRR060663 160_0-2h_embryos_total	V116 male body	SRR1106729 mixed whole adult body	SRR060684 140x9_0-2h_embryos_total	V053 head	SRR060678 9x140_testes_total	SRR060685 9xArg_0-2h_embryos_total	SRR060659 Argentina_testes_total
......................................................................GGATTTTGACGCTGATTAT..................................................................................................................................................................	19	2	1	1.00	1	0	0	1	0	0	0	0	0	0
......................................................................GGATTTTGACGCTGATTATTC................................................................................................................................................................	21	3	1	1.00	1	1	0	0	0	0	0	0	0	0
.................CGTTGTGGAACTAAACCTG.......................................................................................................................................................................................................................	19	2	1	1.00	1	0	1	0	0	0	0	0	0	0
...................TTGTTGAAGTATAGCTGTCACA..................................................................................................................................................................................................................	22	3	2	0.50	1	0	0	0	1	0	0	0	0	0
........................................................................ATTTTGACGCTGATTATTC................................................................................................................................................................	19	2	3	0.33	1	0	0	0	0	1	0	0	0	0
..................................................................................................................ACGTGTAGCTTTTGGTTTGA.....................................................................................................................	20	2	3	0.33	1	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................GTAGTTGTGACAGTCGAC...............................................	18	2	9	0.11	1	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................AGTTGTAGCAGTCGACGTGAT..........................................	21	3	9	0.11	1	0	0	0	0	0	0	1	0	0
......................................................................GGATTTTGACGCTGATTA...................................................................................................................................................................	18	2	10	0.10	1	0	0	0	0	1	0	0	0	0
...............................................................................................TGATATATGGAATAGGTA..........................................................................................................................................	18	2	12	0.08	1	0	0	0	0	0	0	0	0	1
........................................................................................TAAATTATTATAGATGGGAAA..............................................................................................................................................	21	3	20	0.05	1	1	0	0	0	0	0	0	0	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12963:3354045-3354295 -	dvi_10325	CC--ACATTTTGTTTGCAAGCAACAACTTGATATG--GACAGTGGAGTTGTTTTTCGCCCATGCCTGTTT-------AAAAGCT---AAAACTGTGACTAATAATTAATAAT---ATATACCCTATC---------CATTTGCATATCAA----AA------------A-------------------CCAAACTAATTGA-----ACTACCCTCACCAAAT--CA--------------------------------A-AATACAAAAAAA-AAACAACAA----AAAAACCATCAACACCG--------------------------------------ACAGCTGCACGAAGAGAAAATCAGCGCAATTGAAGAGAAACTCGAACTCTCTGA
droMoj3	scaffold_6500:13726008-13726283 -		CATCACATATT-CATGCAAGCAAAAACTT---CTGAAGCCAGTG-TCTTGTT-TTCGCCCATGCCTGCTT-------AAACGCTAC-AAAACTGTGACTAATACTTAATAATATGATGTACCCTCTCCATA--------TTGCATTT--AAACAAAAA----------ACAAAAACCAAAAAAAAAAACCATACTAATTAA-----ACTAC----ACCCAAC--CC--------------------------------CACAAAATATCGAA-AACAAAAACATA-CAAAATCATCCATGG----------------------------------------ACAGCTGCACGAAGAGAAAATCAGCGCCATCGAAGAGAAACTCGAACTCTCAGA
droGri2	scaffold_15252:2925831-2926082 -		ATCCGCTTTGA-----CAAGCAGTCATTT-AAATG--GCGAGTG-ACTTGT--GTCGCCCATGCCTGTTTTTG----AATCGCT---AAAACTGTGACTAATAATACATAAT-CGATGTGCCCTATC---------CATTTGCATAT--A----AA------------A-------------------CCAAACTAATTTA-----ACTACCCCCACCAAATATACAACA--------------------------------AAAAAACAAA-AACAAAC---------GATAATCGACATGC------------------------------AACTCGG-ACAGCTGCACGAAGAGAAAATCAGCGCCATCGAGGAGAAGCTCGAGCTCTCTGA
droWil2	scf2_1100000004585:7337209-7337396 +		AACC-----------------------------------------------------------------------------------AAAAACGTGACTAATAAT---------------------------T--CCATTT----CC--CCTCGCAAAATAATCTTA-ACT----------------------ATAAACG----------------AATGCC--CC--------------------------------A-AAAATAAACAAA-AACAAAAACA--------------ACTCCGTTGCTCAAACCATCCAAAACCAAAAACAAAAACCAAAATCAGCTGCATGAAGAGAAAATCAGCGCAATTGAAGAGAAATTGGAACTCTCCGA
dp5	4_group1:3826496-3826668 +		AT-------------------------------------------------------------------------------------------GTAACTAATAAA-------------------------A--CTGCAT------CT--AATCGAAACCCAACCACGT-------------------------------TATTGCTACCCCCCTCAACAAA---CAAAACACGACACAAAAAAACACGCGCGCACACACGCAAAATAC----C---------------GAA------------------------------------------AAACCGA-ACAGCTGCACGAGGAAAAGATCGGAGCCATTGAGGAGAAACTGGAGCTATCCGA
droPer2	scaffold_5:1443531-1443703 -		AT-------------------------------------------------------------------------------------------GTAACTAATAAA-------------------------A--CTGCAT------CT--AATCGAAACCCAACCACGT-------------------------------TATTGCTACCCCCCTCAACAAA---CAAAACACAACACAAAAAAAAACGCGCGCACGCACGCAAAATAC----C---------------GAA------------------------------------------AAACCGA-ACAGCTGCACGAGGAAAAGATCGGAGCCATTGAGGAGAAACTGGAGCTATCCGA
droAna3	scaffold_12916:7611-7773 -		A----------------------------------------------------------------------------------------AAGCGTGACTAATAAT---------------------------T--GCATTTACATACTCC----TG------------ACCAATC-CCTGAC---------AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAAACTT-GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------TCAGCTGCATGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTATCCGA
droBip1	scf7180000392937:60107-60294 -		TTCT-----------------------------------------------------------------CACTCATTAAGCTCCTTTAAAAGCGTGACTAATAA--------------------------ATT--GCATTTACATACTCC----AC------------ACCAATC-CCTGAC---------AACTAATCGA-----ACC-----CACCCGCC--CC--------------------------------A-AACACGAACCTT-CAACGAACTTTG-TCAAATG------GCCA------------------------------AA-----TTCAGCTGCATGAGGAAAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTGTCCGA
droKik1	scf7180000302468:437133-437221 -		AACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACCAA----------ATG-CCACAAAACCAATGCCG------------------------------A------TGCAGCTGCACGAAGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTGTCCGA
droFic1	scf7180000453815:52205-52257 +		------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
droEle1	scf7180000490640:398068-398120 +		------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGCACGAGGAGAAGATTGGGGCCATCGAGGAGAAGCTGGAGCTCTCGGA
droRho1	scf7180000779930:2337-2496 -		C----------------------------------------------------------------------------------------------------------------------------------------ATTTGCATACGC------A------------ACCAATCCCCCGTC---------AACTAATCGA-----ACA-----CATCCGCC--CC--------------------------------A-AACACGAACCTC-AA-CACTCCATG-CCACAATGTCAATGCCG----------------------ATTCC-G-AAACCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCAGA
droBia1	scf7180000302422:2486055-2486267 +		TT---------------------------------------------------TGTGCCCACGCCTGCTCTCTCATTAAGCTCCCC-TCAAGCGTGACTAATCA--------------------------ATT--GCATTTACATACGC------A------------ACAAACCCCCCGAC---------AACTAATCGA-----ACA-----CACCCGTC--CC-----------GA-------------------A-AACACAAACCACCGAACAATCCCTG-CCCCATGATCAATGCCA------------------------------AA-CCGCATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
droTak1	scf7180000415399:1446682-1446809 +		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----CCA-----CACCCGCC--CC--------------------------------A-AAAAAACACAAA-AACCAACGAACAACCACCTGATCAATGCCG------------------------------GATCCGCAACAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
droEug1	scf7180000409463:47672-47800 -		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACA-----AACCCGCC--CT-----------GA-------------------A-CACACGAACCAA-AATCAATCCTTG-CCTCATGATCAATGCCG------------------------------AATCCGAATCAGCTGCACGAGGAAAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
dm3	chr2L:6727115-6727243 +		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACAAA---CACCCGCC--CC--------------------------------A-AATACGAACCAC-AACCAATCCATG-CCATATGATCAATGCCG------------------------------AATCCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
droSim2	2l:6500557-6500685 +		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACAAA---CACCCGCC--CC--------------------------------A-AATACGAACCAC-AACCAATCCATG-CCACATGATCAATGCCG------------------------------AATCCGTATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
droSec2	scaffold_3:2265782-2265910 +		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACAAA---CACCCGCC--CC--------------------------------A-AATACGAACCAC-AACCAATCCATG-CCACATGATCCATGCCG------------------------------AATCCGTATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
droYak3	2L:6184717-6184843 -		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACA-----CACCCGCC--CC--------------------------------A-AACACGAACCAC-ATCGAATCCATG-CCACATGATCAATGCCG------------------------------AATTCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA
droEre2	scaffold_4929:15643546-15643672 +		AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACA-----CACCCGCC--CC--------------------------------A-AACACGAACCAC-ATCCAATCCATG-CCACATGATCAATGCCG------------------------------AACCCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

CC--ACATTTTGTTTGCAAGCAACAACTTGATATG--GACAGTGGAGTTGTTTTTCGCCCATGCCTGTTT-------AAAAGCT---AAAACTGTGACTAATAATTAATAAT---ATATACCCTATC---------CATTTGCATATCAA----AA------------A-------------------CCAAACTAATTGA-----ACTACCCTCACCAAAT--CA--------------------------------A-AATACAAAAAAA-AAACAACAA----AAAAACCATCAACACCG--------------------------------------ACAGCTGCACGAAGAGAAAATCAGCGCAATTGAAGAGAAACTCGAACTCTCTGA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................................................................................................................................................................................................................................................................A-AAACAACAA----AAAAACCA.....................................................................................................	18	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CATCACATATT-CATGCAAGCAAAAACTT---CTGAAGCCAGTG-TCTTGTT-TTCGCCCATGCCTGCTT-------AAACGCTAC-AAAACTGTGACTAATACTTAATAATATGATGTACCCTCTCCATA--------TTGCATTT--AAACAAAAA----------ACAAAAACCAAAAAAAAAAACCATACTAATTAA-----ACTAC----ACCCAAC--CC--------------------------------CACAAAATATCGAA-AACAAAAACATA-CAAAATCATCCATGG----------------------------------------ACAGCTGCACGAAGAGAAAATCAGCGCCATCGAAGAGAAACTCGAACTCTCAGA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
............................T---CTGAAGCCAGTG-TCTTGTT-TTCGC.................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0

droGri2

ATCCGCTTTGA-----CAAGCAGTCATTT-AAATG--GCGAGTG-ACTTGT--GTCGCCCATGCCTGTTTTTG----AATCGCT---AAAACTGTGACTAATAATACATAAT-CGATGTGCCCTATC---------CATTTGCATAT--A----AA------------A-------------------CCAAACTAATTTA-----ACTACCCCCACCAAATATACAACA--------------------------------AAAAAACAAA-AACAAAC---------GATAATCGACATGC------------------------------AACTCGG-ACAGCTGCACGAAGAGAAAATCAGCGCCATCGAGGAGAAGCTCGAGCTCTCTGA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

AACC-----------------------------------------------------------------------------------AAAAACGTGACTAATAAT---------------------------T--CCATTT----CC--CCTCGCAAAATAATCTTA-ACT----------------------ATAAACG----------------AATGCC--CC--------------------------------A-AAAATAAACAAA-AACAAAAACA--------------ACTCCGTTGCTCAAACCATCCAAAACCAAAAACAAAAACCAAAATCAGCTGCATGAAGAGAAAATCAGCGCAATTGAAGAGAAATTGGAACTCTCCGA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
No Reads

dp5

AT-------------------------------------------------------------------------------------------GTAACTAATAAA-------------------------A--CTGCAT------CT--AATCGAAACCCAACCACGT-------------------------------TATTGCTACCCCCCTCAACAAA---CAAAACACGACACAAAAAAACACGCGCGCACACACGCAAAATAC----C---------------GAA------------------------------------------AAACCGA-ACAGCTGCACGAGGAAAAGATCGGAGCCATTGAGGAGAAACTGGAGCTATCCGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................CACGAGGAAAAGATCGGAGCC..........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................AGCCATTGAGGAGAAACTGGAGC.......	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................GCACGAGGAAAAGATCGGAGC...........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................AGGAAAAGATCGGAGCCATTGAGG...................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1

droPer2

AT-------------------------------------------------------------------------------------------GTAACTAATAAA-------------------------A--CTGCAT------CT--AATCGAAACCCAACCACGT-------------------------------TATTGCTACCCCCCTCAACAAA---CAAAACACAACACAAAAAAAAACGCGCGCACGCACGCAAAATAC----C---------------GAA------------------------------------------AAACCGA-ACAGCTGCACGAGGAAAAGATCGGAGCCATTGAGGAGAAACTGGAGCTATCCGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................................................................................................................................................................................................................................................................................................................................................GCACGAGGAAAAGATCGGAGC...........................	21	1	2.00	2	2	0	0	0	0	0

droAna3

A----------------------------------------------------------------------------------------AAGCGTGACTAATAAT---------------------------T--GCATTTACATACTCC----TG------------ACCAATC-CCTGAC---------AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAAACTT-GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------TCAGCTGCATGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTATCCGA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGA................................................................................................................................	28	1	54.00	54	50	4	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCG.................................................................................................................................	27	1	40.00	40	39	1	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTC..................................................................................................................................	26	1	34.00	34	21	13	0	0	0	0
....................................................................................................................................T--GCATTTACATACTCC----TG------------ACCAATC-CCT........................................................................................................................................................................................................................	28	1	33.00	33	30	3	0	0	0	0
....................................................................................................................................T--GCATTTACATACTCC----TG------------ACCAATC-CC.........................................................................................................................................................................................................................	27	1	29.00	29	19	10	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGCTGCATGAGGAGAAGATCGGGGC...........................	27	1	25.00	25	18	6	1	0	0	0
...............................................................................................................................................................................................................................................................................T-GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------......................................................	26	1	20.00	20	18	2	0	0	0	0
..............................................................................................................................................................................................................................................................................TT-GAACGAACTTTG-TCAAACGGCCAA.................................................................................................	26	1	17.00	17	16	1	0	0	0	0
............................................................................................................................................................................................................................................................................ACTT-GAACGAACTTTG-TCAAACGGC....................................................................................................	25	1	16.00	16	15	1	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACT...................................................................................................................................	25	1	15.00	15	12	3	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAA...............................................................................................................................	29	1	14.00	14	14	0	0	0	0	0
.............................................................................................................................................................................TC-CCTGAC---------AACTAATCGA-----ACC-----CACCCGTC--...........................................................................................................................................................................	29	1	14.00	14	12	2	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGCTGCATGAGGAGAAGATCGGG.............................	25	1	13.00	13	11	0	2	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGCTGCATGAGGAGAAGATCGG..............................	24	1	13.00	13	10	2	1	0	0	0
..............................................................................................................................................................................................................................................................................TT-GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------......................................................	27	1	12.00	12	11	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGCTGCATGAGGAGAAGATCGGGG............................	26	1	11.00	11	9	2	0	0	0	0
........................................................................................................T---------------------------T--GCATTTACATACTCC----TG------------ACCAATC-CC.........................................................................................................................................................................................................................	28	1	11.00	11	6	5	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGGC...........................	22	1	10.00	10	5	3	2	0	0	0
............................................................................................................................................TACATACTCC----TG------------ACCAATC-CCTGAC---------AAC.........................................................................................................................................................................................................	28	1	10.00	10	8	2	0	0	0	0
...........................................................................................................................................................................................................................................................................AACTT-GAACGAACTTTG-TCAAACGGC....................................................................................................	26	1	10.00	10	6	4	0	0	0	0
..........................................................................................................................................................................................................................................................................................................T------------------------------------------TCAGCTGCATGAGGAGAAGATCGG..............................	25	1	10.00	10	8	2	0	0	0	0
...................................................................................................................................................................................GAC---------AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-.......................................................................................................................................	27	1	10.00	10	9	1	0	0	0	0
...............................................................................................................................................................................................................................................................................T-GAACGAACTTTG-TCAAACGGCCAA.................................................................................................	25	1	10.00	10	10	0	0	0	0	0
..................................................................................................................................................................................TGAC---------AACTAATCGA-----ACC-----CACCCGTC--...........................................................................................................................................................................	25	1	9.00	9	7	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................T------------------------------------------TCAGCTGCATGAGGAGAAGATCGGG.............................	26	1	8.00	8	8	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAAT------------------------------------------TCAGCTGCATGAGGAGAAGATC................................	26	1	8.00	8	3	4	0	0	1	0
...............................................................................................................................................................................................AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTC..................................................................................................................................	29	1	8.00	8	7	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................T------------------------------------------TCAGCTGCATGAGGAGAAGATCGGGG............................	27	1	8.00	8	8	0	0	0	0	0
.....................................................................................................TAAT---------------------------T--GCATTTACATACTCC----TG------------ACCAA..............................................................................................................................................................................................................................	27	1	8.00	8	4	3	1	0	0	0
..................................................................................................................................................................................TGAC---------AACTAATCGA-----ACC-----CACCCGTC--T..........................................................................................................................................................................	26	1	8.00	8	7	1	0	0	0	0
..................................................................................................................................................................................TGAC---------AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-.......................................................................................................................................	28	1	7.00	7	6	1	0	0	0	0
....................................................................................................................................T--GCATTTACATACTCC----TG------------ACCAATC-C..........................................................................................................................................................................................................................	26	1	7.00	7	3	4	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................TGAGGAGAAGATCGGGGCCATCGAG....................	25	1	7.00	7	7	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................T------------------------------------------TCAGCTGCATGAGGAGAAGATCG...............................	24	1	7.00	7	7	0	0	0	0	0
............................................................................................................................................TACATACTCC----TG------------ACCAATC-CCTGAC---------............................................................................................................................................................................................................	25	1	6.00	6	1	5	0	0	0	0
..........................................................................................................................................................................................................................................................................AAACTT-GAACGAACTTTG-TCAAACGGC....................................................................................................	27	1	6.00	6	3	2	1	0	0	0
............................................................................................................................................................................................................................................................................ACTT-GAACGAACTTTG-TCAAACGGCCAA.................................................................................................	28	1	6.00	6	6	0	0	0	0	0
.................................................................................................................................................................................CTGAC---------AACTAATCGA-----ACC-----CACCCGT..............................................................................................................................................................................	25	1	6.00	6	5	1	0	0	0	0
.................................................................................................................................................................................................................................................................................GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------......................................................	25	1	6.00	6	6	0	0	0	0	0
.....................................................................................................TAAT---------------------------T--GCATTTACATACTCC----TG------------ACC................................................................................................................................................................................................................................	25	1	6.00	6	3	3	0	0	0	0
...............................................................................................................................................................................................................................................................................T-GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------T.....................................................	27	1	5.00	5	5	0	0	0	0	0
............................................................................................................................................................................................................................................................................ACTT-GAACGAACTTTG-TCAAACGGCC...................................................................................................	26	1	5.00	5	3	2	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GCCATCGAGGAGAAGCTGGAGCTATC...	26	1	5.00	5	3	2	0	0	0	0
...........................................................................................................................................................................................................................................................................AACTT-GAACGAACTTTG-TCAAACGGCC...................................................................................................	27	1	5.00	5	3	2	0	0	0	0
...........................................................................................................................................TTACATACTCC----TG------------ACCAATC-CCTGAC---------A...........................................................................................................................................................................................................	27	1	5.00	5	5	0	0	0	0	0
....................................................................................................................................................................................................................................................................CACTCGAAACTT-GAACGAACTTTG-TC...........................................................................................................	26	1	5.00	5	5	0	0	0	0	0
.................................................................................................................................................................................CTGAC---------AACTAATCGA-----ACC-----CACCCG...............................................................................................................................................................................	24	1	5.00	5	4	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................T------------------------------------------TCAGCTGCATGAGGAGAAGATCGGGGC...........................	28	1	5.00	5	4	0	0	0	1	0
.............................................................................................................................................................................TC-CCTGAC---------AACTAATCGA-----ACC-----CACCCG...............................................................................................................................................................................	27	1	5.00	5	4	1	0	0	0	0
...........................................................................................................................................TTACATACTCC----TG------------ACCAATC-CCTGAC---------AAC.........................................................................................................................................................................................................	29	1	5.00	5	4	1	0	0	0	0
.........................................................................................................................................................................................................................................................................GAAACTT-GAACGAACTTTG-TCAAACGGC....................................................................................................	28	1	5.00	5	3	2	0	0	0	0
.....................................................................................................................................................................................................TCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAAAC.............................................................................................................................	28	1	5.00	5	4	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCATGAGGAGAAGATCGGGGC...........................	24	1	4.00	4	3	1	0	0	0	0
...........................................................................................................................................TTACATACTCC----TG------------ACCAATC-CCTGAC---------............................................................................................................................................................................................................	26	1	4.00	4	1	3	0	0	0	0
.............................................................................................................................................................................TC-CCTGAC---------AACTAATCGA-----ACC-----CACCC................................................................................................................................................................................	26	1	4.00	4	2	2	0	0	0	0
......................................................................................................................................................................................................................................................................................AACTTTG-TCAAACGGCCAAT------------------------------------------TCAGC.................................................	25	1	4.00	4	1	3	0	0	0	0
.....................................................................................................................................................................................................TCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAAACT............................................................................................................................	29	1	4.00	4	2	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGGCCAT........................	25	1	4.00	4	4	0	0	0	0	0
..................................................................................................TAATAAT---------------------------T--GCATTTACATACTCC----TG------------AC.................................................................................................................................................................................................................................	27	1	4.00	4	1	3	0	0	0	0
..........................................................................................................................................................................................................................................................................AAACTT-GAACGAACTTTG-TCAAACGGCC...................................................................................................	28	1	4.00	4	4	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGG............................	21	1	4.00	4	4	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCATGAGGAGAAGATCGGGG............................	23	1	4.00	4	3	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGG.............................	20	1	4.00	4	2	2	0	0	0	0
..................................................................................................................................................................................TGAC---------AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------.........................................................................................................................................	27	1	4.00	4	3	1	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CAC....................................................................................................................................	24	1	4.00	4	2	2	0	0	0	0
.......................................................................................................................................GCATTTACATACTCC----TG------------ACCAATC-CCT........................................................................................................................................................................................................................	27	1	4.00	4	4	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................T------------------------------------------TCAGCTGCATGAGGAGAAGATC................................	23	1	4.00	4	1	3	0	0	0	0
...................................................................................................................................................................................................AATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGA................................................................................................................................	27	1	3.00	3	3	0	0	0	0	0
.......................................................................................................AT---------------------------T--GCATTTACATACTCC----TG------------ACCAA..............................................................................................................................................................................................................................	25	1	3.00	3	2	1	0	0	0	0
.................................................................................................................................................................................................................................................................................GAACGAACTTTG-TCAAACGGCCAA.................................................................................................	24	1	3.00	3	3	0	0	0	0	0
.................................................................................................................................................................................CTGAC---------AACTAATCGA-----ACC-----CACCCGTC--...........................................................................................................................................................................	26	1	3.00	3	1	2	0	0	0	0
...............................................................................................................................................................................................AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACT...................................................................................................................................	28	1	3.00	3	2	1	0	0	0	0
....................................................................................................................................................................................................................................................................CACTCGAAACTT-GAACGAACTTTG-TCA..........................................................................................................	27	1	3.00	3	3	0	0	0	0	0
..............................................................................................................................................................................................................................................................................TT-GAACGAACTTTG-TCAAACGGCC...................................................................................................	24	1	3.00	3	1	2	0	0	0	0
........................................................................................................T---------------------------T--GCATTTACATACTCC----TG------------ACCAATC-C..........................................................................................................................................................................................................................	27	1	3.00	3	2	1	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CA.....................................................................................................................................	23	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................................................................................................................................AAACTT-GAACGAACTTTG-TCAAACGG.....................................................................................................	26	1	3.00	3	3	0	0	0	0	0
..................................................................................................................................................................................................................................................................................AACGAACTTTG-TCAAACGGCCAAT------------------------------------------......................................................	24	1	3.00	3	3	0	0	0	0	0
...........................................................................................................................................TTACATACTCC----TG------------ACCAATC-CCTGA......................................................................................................................................................................................................................	25	1	3.00	3	1	2	0	0	0	0
.......................................................................................................................................GCATTTACATACTCC----TG------------ACCAATC-CC.........................................................................................................................................................................................................................	26	1	3.00	3	2	1	0	0	0	0
........................................................................................................................................CATTTACATACTCC----TG------------ACCAATC-CCTGAC---------............................................................................................................................................................................................................	29	1	3.00	3	3	0	0	0	0	0
........................................................................................................................................CATTTACATACTCC----TG------------ACCAATC-CCC........................................................................................................................................................................................................................	26	1	3.00	3	0	3	0	0	0	0
...............................................................................................................................................................................................................................................................................T-GAACGAACTTTG-TCAAACGGCCA..................................................................................................	24	1	3.00	3	3	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGCTGCATGAGGAGAAGATCG...............................	23	1	3.00	3	3	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGCTGCATGAGGAGAAGATC................................	22	1	3.00	3	0	3	0	0	0	0
..................................................................................................................................................................................TGAC---------AACTAATCGA-----ACC-----CACCCGT..............................................................................................................................................................................	24	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGGCCA.........................	24	1	3.00	3	3	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GAGGAGAAGATCGGGGCCATCGA.....................	23	1	3.00	3	2	0	0	0	0	1
.....................................................................................................................................................................................................TCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAA...............................................................................................................................	26	1	3.00	3	2	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................CATCGAGGAGAAGCTGGAGCTATC...	24	1	3.00	3	1	2	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................TGAGGAGAAGATCGGGGCCATCG......................	23	1	3.00	3	3	0	0	0	0	0
...................................................................................................................................................................................................AATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTC..................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGGCCATCGA.....................	28	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACC...................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................GCATGAGGAGAAGATCGGGGC...........................	21	1	2.00	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................CTGCATGAGGAGAAGATCGGGGC...........................	23	1	2.00	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................TCGGGGCCATCGAGGAGAAGCTGGA.........	25	1	2.00	2	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................TT-GAACGAACTTTG-TCAAACGGCCA..................................................................................................	25	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................CTT-GAACGAACTTTG-TCAAACGGCC...................................................................................................	25	1	2.00	2	1	1	0	0	0	0
................................................................................................................................................................................CCTGAC---------AACTAATCGA-----ACC-----CACCCGTC--...........................................................................................................................................................................	27	1	2.00	2	1	1	0	0	0	0
...................................................................................................................................................................................GAC---------AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------.........................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................T--GCATTTACATACTCC----TG------------ACCAATC-CCC........................................................................................................................................................................................................................	28	1	2.00	2	0	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGGCCATC.......................	26	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................................................................................ATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAAAC.............................................................................................................................	29	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................GAGGAGAAGATCGGGGCCATCG......................	22	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................T--GCATTTACATACTCC----TG------------ACCAAT.............................................................................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAACTTTG-TCAAACGGCCAAT------------------------------------------TCAGC.................................................	26	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................AAGATCGGGGCCATCGAGGAGAAGCTG...........	27	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................TCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGA................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................................................................................................AACTT-GAACGAACTTTG-TCAAACGG.....................................................................................................	25	1	2.00	2	1	0	1	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGT................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................TTTACATACTCC----TG------------ACCAATC-CCTGAC---------............................................................................................................................................................................................................	27	1	2.00	2	1	1	0	0	0	0
........................................................................................................T---------------------------T--GCATTTACATACTCC----TG------------ACCAAT.............................................................................................................................................................................................................................	25	1	2.00	2	1	1	0	0	0	0
....................................................................................................................................T--GCATTTACATACTCC----TG------------ACCAATC-...........................................................................................................................................................................................................................	25	1	2.00	2	1	1	0	0	0	0
.................................................................................................................................................................................................................................C--------------------------------A-CACTCGAAACTT-GAACGAACTTTG-TC...........................................................................................................	28	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................CTT-GAACGAACTTTG-TCAAACGGC....................................................................................................	24	1	2.00	2	1	1	0	0	0	0
........................................................................................................T---------------------------T--GCATTTACATACTCC----TG------------ACCAATC-CCT........................................................................................................................................................................................................................	29	1	2.00	2	1	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCATGAGGAGAAGATCGGGGCC..........................	25	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................GAAGATCGGGGCCATCGAGGAGAA...............	24	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................C-CCTGAC---------AACTAATCGA-----ACC-----CACCCGTC--...........................................................................................................................................................................	28	1	2.00	2	1	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................CATGAGGAGAAGATCGGGGCCATCGAG....................	27	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................C-CCTGAC---------AACTAATCGA-----ACC-----CACCCG...............................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCAGCTGCATGAGGAGAAGATCGGT.............................	25	1	2.00	2	1	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GAGAAGATCGGGGCCATCGAGGAGA................	25	1	2.00	2	1	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................CATGAGGAGAAGATCGGGGCCATC.......................	24	1	2.00	2	0	2	0	0	0	0
..........................................................................................................................................................................CAATC-CCTGAC---------AACTAATCGA-----ACC-----C....................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGGCC..........................	23	1	2.00	2	0	2	0	0	0	0
...........................................................................................................................................................................................................................................................................AACTT-GAACGAACTTTG-TCAAACGGCCAA.................................................................................................	29	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................TGAGGAGAAGATCGGGGCCATCGA.....................	24	1	2.00	2	2	0	0	0	0	0
.................................................................................................................................................................................................................................................................................GAACGAACTTTG-TCAAACGGCC...................................................................................................	22	1	2.00	2	0	2	0	0	0	0
...................................................................................................................................................................................................AATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCG.................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................T-GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------TC....................................................	28	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................GAC---------AACTAATCGA-----ACC-----CACCCGTC--T..........................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................TACATACTCC----TG------------ACCAATC-CCTG.......................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................ACTT-GAACGAACTTTG-TCAAACGGCCA..................................................................................................	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................CGAAACTT-GAACGAACTTTG-TCAAAC.......................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.....................................................................................................TAAT---------------------------T--GCATTTACATACTCC----TG------------A..................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................AACGAACTTTG-TCAAACGGCCAAT------------------------------------------T.....................................................	25	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................CGAACTTTG-TCAAACGGCCAAT------------------------------------------T.....................................................	23	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................AGCTGCATGAGGAGAAGATCGG..............................	22	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................AATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACT...................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAGAAGCTGGAGCTATCCGA	25	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................CACCCGTC--TC--------------------------------A-CACTCGAAAC.............................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................ACTCGAAACTT-GAACGAACTTTG-TCA..........................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................CTT-GAACGAACTTTG-TCAAACGGCCA..................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................AATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAA...............................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................TC-CCTGAC---------AACTAATCGA-----ACC-----CAC..................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GAGAAGATCGGGGCCATCGAGGA..................	23	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................CGAACTTTG-TCAAACGGCCAAT------------------------------------------TCAGC.................................................	27	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................TCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAAA..............................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................TCGGGGCCATCGAGGAGAAGCTGGAGC.......	27	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................TGAC---------AACTAATCGA-----ACC-----CACCCGTC--TC--------------------------------T-.......................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................CAGCTGCATGAGGAGAAGATCGGGG............................	25	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................TTACATACTCC----TG------------ACCAATC-CCTGAA---------............................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................AT------------------------------------------TCAGCTGCATGAGGAGAAGATC................................	24	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................TGAC---------AACTAATCGA-----ACC-----CACCC................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................CCAATC-CCTGAC---------AACTAATCGA-----ACC-----CACC.................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................AATC-CCTGAC---------AACTAATCGA-----ACC-----CACCCG...............................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................TACTCC----TG------------ACCAATC-CCTGAC---------AACTAA......................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
......................................................................................................AAT---------------------------T--GCATTTACATACTCC----TG------------ACCAA..............................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAAT------------------------------------------TCAGCTGCATGAGGAGAA....................................	22	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GAGAAGATCGGGGCCATCGAGGAGAA...............	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................CACTCGAAACTT-GAACGAACTTTG-T............................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................AT------------------------------------------TCAGCTGCATGAGGAGAAG...................................	21	1	1.00	1	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................CAAT------------------------------------------TCAGCTGCATGAGGAGAAG...................................	23	1	1.00	1	1	0	0	0	0	0
........................................................................................................T---------------------------T--GCATTTACATACTCC----TG------------ACCAATC-...........................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................ACCCGTC--TC--------------------------------A-CACTCGAAACTT-GAACG.....................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................AGCTGCATGAGGAGAAGATCG...............................	21	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................TACATACTCC----TG------------ACCAATC-CCTGAC---------A...........................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................AGCTGCATGAGGAGAAGATCGGGGCCA.........................	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................TC--TC--------------------------------A-CACTCGAAACTT-GAAC......................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................ATC-CCTGAC---------AACTAATCGA-----ACC-----CACC.................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................ATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CA.....................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................ACATACTCC----TG------------ACCAATC-CCTGAC---------AAC.........................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................AATC-CCTGAC---------AACTAATCGA-----ACC-----CACCC................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................CACCCGTC--TC--------------------------------A-CACTCGAAACTT-GAAC......................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................CCTGAC---------AACTAATCGA-----ACC-----CACCCGT..............................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................G-TCAAACGGCCAAT------------------------------------------TCAGCTGCAT............................................	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCATGAGGAGAAGATCGGG.............................	22	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................TTACATACTCC----TG------------ACCAATC-CCTG.......................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.......................................................................................................AT---------------------------T--GCATTTACATACTCC----TG------------ACCAATC-C..........................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.....................................................................................................TAAT---------------------------T--GCATTTACATACTCC----TG------------AC.................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------TC....................................................	27	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................AACGGCCAAT------------------------------------------TCAGCTGCATGAGGA.......................................	25	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................CATGAGGAGAAGATCGGGGCCATCGA.....................	26	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGGGGCCATCT......................	27	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................CATTTACATACTCC----TG------------ACCAATC-C..........................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................TC-CCTGAC---------AACTAATCGA-----ACC-----CACCCGT..............................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................CGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGAAACC............................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................CTAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTCGA................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................TC-CCTGAC---------AACTAATCGA-----ACC-----CACC.................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...............................................................................................GACTAATAAT---------------------------T--GCATTTACATACTCC----.................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................CAATC-CCTGAC---------AACTAATCGA-----ACC-----.....................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................ATGAGGAGAAGATCGGGGCCATCGA.....................	25	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................CATGAGGAGAAGATCGGGGCCATCG......................	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................TAAT---------------------------T--GCATTTACATACTCC----TG------------ACCAAT.............................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................CACTCGAAACTT-GAACGAACTTTG-TCAAA........................................................................................................	29	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................TAATCGA-----ACC-----CACCCGTC--TC--------------------------------A-CACTT..................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................TCC----TG------------ACCAATC-CCTGAC---------AACTAATCGA-----A............................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCATGAGGAGAAGATCGG..............................	21	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................GCATGAGGAGAAGATCGGGGCCATC.......................	25	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................CAAT------------------------------------------TCAGCTGCATGAGGAGAAGATCGG..............................	28	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCATGAGGAGAAGATCGG..............................	19	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................CCATCGAGGAGAAGCTGGAGCTAT....	24	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................TC--------------------------------A-CACTCGAAACTT-GAACGAACTTTG-TC...........................................................................................................	29	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................CACCCGTC--TC--------------------------------A-CACTCGAAACTT-GA........................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................TC--------------------------------A-CACTCGAAACTT-GAACGAACTT................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................CTT-GAACGAACTTTG-TCAAACGGCCAAT------------------------------------------......................................................	28	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................AACTT-GAACGAACTTTG-TCAAACGGCCA..................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................TTACATACTCC----TG------------ACCAATC-CC.........................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................CTGAC---------AACTAATCGA-----ACC-----CACCCGTC--T..........................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................TCGAGGAGAAGCTGGAGCTATCC..	23	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................ACGAACTTTG-TCAAACGGCCAAT------------------------------------------TCAGC.................................................	28	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................TG------------ACCAATC-CCTGAC---------AACTAATCGA-----AC...........................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................GCATTTACATACTCC----TG------------ACCAATC-CCTG.......................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0

droBip1

TTCT-----------------------------------------------------------------CACTCATTAAGCTCCTTTAAAAGCGTGACTAATAA--------------------------ATT--GCATTTACATACTCC----AC------------ACCAATC-CCTGAC---------AACTAATCGA-----ACC-----CACCCGCC--CC--------------------------------A-AACACGAACCTT-CAACGAACTTTG-TCAAATG------GCCA------------------------------AA-----TTCAGCTGCATGAGGAAAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTGTCCGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACCAA----------ATG-CCACAAAACCAATGCCG------------------------------A------TGCAGCTGCACGAAGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTGTCCGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGCACGAGGAGAAGATTGGGGCCATCGAGGAGAAGCTGGAGCTCTCGGA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

C----------------------------------------------------------------------------------------------------------------------------------------ATTTGCATACGC------A------------ACCAATCCCCCGTC---------AACTAATCGA-----ACA-----CATCCGCC--CC--------------------------------A-AACACGAACCTC-AA-CACTCCATG-CCACAATGTCAATGCCG----------------------ATTCC-G-AAACCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCAGA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TT---------------------------------------------------TGTGCCCACGCCTGCTCTCTCATTAAGCTCCCC-TCAAGCGTGACTAATCA--------------------------ATT--GCATTTACATACGC------A------------ACAAACCCCCCGAC---------AACTAATCGA-----ACA-----CACCCGTC--CC-----------GA-------------------A-AACACAAACCACCGAACAATCCCTG-CCCCATGATCAATGCCA------------------------------AA-CCGCATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----CCA-----CACCCGCC--CC--------------------------------A-AAAAAACACAAA-AACCAACGAACAACCACCTGATCAATGCCG------------------------------GATCCGCAACAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACA-----AACCCGCC--CT-----------GA-------------------A-CACACGAACCAA-AATCAATCCTTG-CCTCATGATCAATGCCG------------------------------AATCCGAATCAGCTGCACGAGGAAAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total
No Reads

dm3

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACAAA---CACCCGCC--CC--------------------------------A-AATACGAACCAC-AACCAATCCATG-CCATATGATCAATGCCG------------------------------AATCCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................................................................................................................................................................................................................................................................................................................................................................AGAAGATCGGGGCCATCGAGGA..................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................AGATCGGGGCCATCGAGGAGAA...............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................GAGAAGATCGGGGCCATCGAG....................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................ATCAGCTGCACGAGGAGAAGATCGG..............................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................ACGAGGAGAAGATCGGGGCCT.........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................GGGCCATCGAGGAGAAGC.............	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................ATCGGGGCCATCGAGGAGA................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCACGAGGAGAAGATCGGGGC...........................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................ATGATCAATGCCG------------------------------AATCCGAA......................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................GGGGCCATCGAGGAGAAGCTGGAGC.......	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................ATGCCG------------------------------AATCCGAATCAG..................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................ATCGAGGAGAAGCTGGAGCTC.....	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................GCCG------------------------------AATCCGAATCAGCTG...............................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................GCCATCGAGGAGAAGCTG...........	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................ATCGGGGCCATCGAGGAG.................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSim2

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACAAA---CACCCGCC--CC--------------------------------A-AATACGAACCAC-AACCAATCCATG-CCACATGATCAATGCCG------------------------------AATCCGTATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................ACGAGGAGAAGATCGGGGC...........................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCACGAGGAGAAGATCGGGGC...........................	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................GCACGAGGAGAAGATCGGGGC...........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................GCCG------------------------------AATCCGTATCAG..................................................	16	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0

droSec2

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACAAA---CACCCGCC--CC--------------------------------A-AATACGAACCAC-AACCAATCCATG-CCACATGATCCATGCCG------------------------------AATCCGTATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...............................................................................................................................................................................................................................................................................................CACATGATCCATGCCG------------------------------AATCCGTA......................................................	24	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................GGGGCCATCGAGGAGAAGCT............	20	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................GGGCCATCGAGGAGAAGCTGGAGC.......	24	1	1.00	1	0	0	0	1
................................................................................................................................................................................................................................................................................................................................................................................CATCGAGGAGAAGCTGGAGC.......	20	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................GCACGAGGAGAAGATCGGGGC...........................	21	1	1.00	1	0	0	1	0

droYak3

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACA-----CACCCGCC--CC--------------------------------A-AACACGAACCAC-ATCGAATCCATG-CCACATGATCAATGCCG------------------------------AATTCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAATCGA-----ACA-----CACCCGCC--CC--------------------------------A-AACACGAACCAC-ATCCAATCCATG-CCACATGATCAATGCCG------------------------------AACCCGAATCAGCTGCACGAGGAGAAGATCGGGGCCATCGAGGAGAAGCTGGAGCTCTCCGA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................GCACGAGGAGAAGATCGGGGC...........................	21	1	2.00	2	0	1	0	0	1	0	0

dvi_10325

scaffold_12963:3354095-3354245 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CCACATTTTGTTTGCAAGCAACAACTTGATATGGACAGTGGAGTTGTTTTTCGCCCATGCCTGTTTAAAAGCTAAAACTGTGACTAATAATTAATAATATATACCCTATCCATTTGCATATCAAAAACCAAACTAATTGAACTACCCTCACCAAATCAAAATACAAAAAAAAAACAACAAAAAAACCATCAACACCGACAGCTGCACGAAGAGAAAATCAGCGCAATTGAAGAGAAACTCGAACTCTCTGA ************************************************((((........(((....))).......))))......................................................................................................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M027 male body	SRR060659 Argentina_testes_total	M061 embryo	SRR060660 Argentina_ovaries_total	SRR060671 9x160_males_carcasses_total	V116 male body	SRR060684 140x9_0-2h_embryos_total	V047 embryo	SRR060672 9x160_females_carcasses_total	SRR060657 140_testes_total	SRR060663 160_0-2h_embryos_total	M028 head	SRR060661 160x9_0-2h_embryos_total	SRR060668 160x9_males_carcasses_total	SRR060687 9_0-2h_embryos_total
..............................................................................................................................................................................................................................CCTATGGAAGAGAAACTC...........	18	3	20	6.45	129	87	19	0	19	1	0	0	0	0	2	1	0	0	0	0
..............................................................................................................................................................................................................................CCTATGGAAGAGAAACTCG..........	19	3	14	2.29	32	0	10	0	5	5	5	0	0	2	1	1	1	1	1	0
.................................................................................................................................TAACTAATTGAACTACCCTCACCAA.................................................................................................	25	1	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................AAAACAACAAAAAAACCA...............................................................	18	0	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CTATGGAAGAGAAACTCGT.........	19	3	20	0.30	6	0	1	0	3	0	1	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................ACCTGCAGGAAGAGAAAGTCA...............................	21	3	4	0.25	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CTAAAGCTGCACGAAGAGA.....................................	19	2	4	0.25	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................CAATTGAAGATGTACTCGAA........	20	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1

-0.3	-0.2	-0.2