dvi_10319

exon [dvir_GLEANR_1243:13]; CDS [Dvir\GJ12463-cds]; exon [dvir_GLEANR_1243:12]; CDS [Dvir\GJ12463-cds]; intron [Dvir\GJ12463-in]

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TGTGGAGCAATGAGCGTGTCATACGCTGGGTGGGCAGCATAGGACTGAAGGTGAGTGTTGAGAGCTGAGTTTGAGCTTAGATTTTGTTGAGAAATATCCAGGAATAAGAGCACAAGTAGACTTTGGTTTTGCTTGCATTATCGCATTTTTTCATTGCTTATAATTCTCAATGAGTTCAAGCTACGAATGAGGGACAAACCCCTGCAAGCCTAGGGTCGATAGTAAAAACTTCTGACAAAATAAGTTATATGATTTGAAAATGTAACCATAATCTTCCCCAGGAATATGCCAATAACTTGCTCGAATCAGGTGTCCATGGTGGTCTGATGGC ************************************************.........((((.((..((((((((((.((.((((((((((((((..((((((.(((.((.(((((((((....)).))))))).......)).))).))).)))..)))..))))))))))).))))))).)))))..))........((((......))))((((..(((....)))..)))).......(((((((.........))))))).....))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	V053 head	SRR060657 140_testes_total	V116 male body	GSM1528803 follicle cells	M061 embryo	SRR060676 9xArg_ovaries_total	SRR060677 Argx9_ovaries_total	SRR060689 160x9_testes_total	SRR060664 9_males_carcasses_total	SRR060662 9x160_0-2h_embryos_total	SRR060675 140x9_ovaries_total	SRR060667 160_females_carcasses_total	SRR060673 9_ovaries_total
...........................GGGTGGGCAGCATAGGACTGAA..........................................................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.GTGGAGCAATGAGCGTGTC.......................................................................................................................................................................................................................................................................................................................	19	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0
................................GGCAGCATAGGACTGAAG.........................................................................................................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................GAAGGTGGGTGTTGCGAGCTG........................................................................................................................................................................................................................................................................	21	2	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.................................................GGTCAGTGTTGATAGCTGGGT.....................................................................................................................................................................................................................................................................	21	3	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TTATAATTCGCAAAGAGTTCAAGCT.....................................................................................................................................................	25	2	8	0.50	4	0	0	0	0	0	0	2	1	0	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................TTGCTCGAATCGGTTGTCCAT..............	21	2	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................GGTGTCCATGGAAGTCGGA....	19	3	16	0.50	8	0	0	0	6	0	0	0	0	0	0	2	0	0	0
..................................................................................................................AGTAGACTTCGGTTTGGC.......................................................................................................................................................................................................	18	2	20	0.45	9	0	0	0	0	0	9	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................GGTGGCCATGGAAGTCTGA....	19	3	7	0.29	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................TGTTCCCCCGGAATAGGCC.........................................	19	3	4	0.25	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................TCAACGTGTTCAAGCTAAGAA................................................................................................................................................	21	3	7	0.14	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................TATAATTCGCAAAGAGTTCAAGCT.....................................................................................................................................................	24	2	8	0.13	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......GAATGAGCATGGCATACGCT................................................................................................................................................................................................................................................................................................................	20	3	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................TTATAATTCGCAAAGAGTTCAAGCTTC...................................................................................................................................................	27	3	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1

ACACCTCGTTACTCGCACAGTATGCGACCCACCCGTCGTATCCTGACTTCCACTCACAACTCTCGACTCAAACTCGAATCTAAAACAACTCTTTATAGGTCCTTATTCTCGTGTTCATCTGAAACCAAAACGAACGTAATAGCGTAAAAAAGTAACGAATATTAAGAGTTACTCAAGTTCGATGCTTACTCCCTGTTTGGGGACGTTCGGATCCCAGCTATCATTTTTGAAGACTGTTTTATTCAATATACTAAACTTTTACATTGGTATTAGAAGGGGTCCTTATACGGTTATTGAACGAGCTTAGTCCACAGGTACCACCAGACTACCG ************************************************.........((((.((..((((((((((.((.((((((((((((((..((((((.(((.((.(((((((((....)).))))))).......)).))).))).)))..)))..))))))))))).))))))).)))))..))........((((......))))((((..(((....)))..)))).......(((((((.........))))))).....))))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M047 female body	M027 male body	SRR060663 160_0-2h_embryos_total	V047 embryo	V116 male body	SRR060672 9x160_females_carcasses_total	SRR060686 Argx9_0-2h_embryos_total	V053 head	SRR060674 9x140_ovaries_total
.....................................................................................CAACTCTTTATAGGGACCTATT................................................................................................................................................................................................................................	22	3	1	1.00	1	1	0	0	0	0	0	0	0	0
..............................................................................TCGAAAACAACTCTGTATA..........................................................................................................................................................................................................................................	19	2	3	0.33	1	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................ACAAGGGGGCCTTATCCGG.........................................	19	3	4	0.25	1	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................ATATACGGTTATGGAACGAG.............................	20	2	4	0.25	1	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................TTAGAAGGGGTCCTGAAA............................................	18	2	4	0.25	1	0	0	1	0	0	0	0	0	0
....................................................................................................CGTTATTCTCGTGATCAT.....................................................................................................................................................................................................................	18	2	5	0.20	1	0	0	0	0	0	1	0	0	0
............................................................................................................................................AGGGTAAAAAAGTAACGGA............................................................................................................................................................................	19	2	9	0.11	1	0	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................TGTTTGGGAACGTGCGGAGC......................................................................................................................	20	3	11	0.09	1	0	0	0	0	0	0	0	1	0
................................................................................................................................................TAAAAAAGTGACGACTAGTAA......................................................................................................................................................................	21	3	14	0.07	1	0	0	0	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................AGGGTTATTGAACGAGCA...........................	18	2	20	0.05	1	1	0	0	0	0	0	0	0	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12963:3350560-3350890 -	dvi_10319	TGTGGAGCAATGAGCGTGTCATACGCTGGGTGGGCAGCATAGGACTGAAGGTG----------------AGTGTTGAGAGCTGAGT------------TTGAGCTTAGATTTTGTTGAGAAATATCC-AGGAATAAGAGCACAAGTAGACTTTGGTTTTGCTTGCATTATCGCATTTTTTCATTGCTTATAATTCTCAATGAGTTCAAGCTACGAATGAGGGACAAACCCCTGCAAGCCTAGGGTCGATAGTAAAAACTTCTGACAAAATAAGTTATATGATTTGAAAATGTAACCATAA---T-CT---TCCCCAGGAATATGCCAATAACTTGCTCGAATCAGGTGTCCATGGTGGTCTGATGGC
droMoj3	scaffold_6500:13723052-13723120 -		TGTGGAGCAATGAGCGTGTCATACGATGGGTGAGCAGCATAGGGTTGAAGGTG----------------GGTATTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAA-----G---------------------------------------------
droGri2	scaffold_15252:2922434-2922485 -		A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAATATGCCAATAACTTGCTCGAATCAGGCGTGCATGGTGGTCTGATGGC
droWil2	scf2_1100000004585:7340353-7340439 +		TAGATTATAAATTGT-------------------------------------------------------------------------------------------AAA----------ATGTAT-TT------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------T-CT---ATGCCAGGAATATGCCAACAACTTGCTCGAATCGGGTGTGCATGGCGGCCTGATGGC
dp5	4_group1:3829526-3829592 +		TGTGGAGCAATGAACGCGTCATACGCTGGGTGGGCAGCATAGGACTTAAAGTA----------------AGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGAGTG---------------------------------------------
droPer2	scaffold_5:1440613-1440679 -		TGTGGAGCAATGAACGCGTCATACGCTGGGTGGGCAGCATAGGACTTAAAGTA----------------AGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGAGTG---------------------------------------------
droAna3	scaffold_12916:4314-4444 -	dan_460	A----------------------------------AGCATCGGACTTAAGGTA----------------GAAACTCTACTGTATTTT--------------------GA----------ATAGATA-----AA-------------------------------------------TAACAATTGATT------------------------------------------------------------------------------------------------------------ATAATTATATTTAATTCAAAGGAATACGCCAACAACTTGCTGGAATCTGGGGTACATGGGGCTCTGATGGC
droBip1	scf7180000392937:56927-57008 -		TTATA------------------TTATTTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCATTTT---TTTTAAGGAATACGCTAACAACTTGCTCGAATCTGGGGTACATGGGGCCCTGATGGC
droKik1	scf7180000302468:433490-433547 -		TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGAATATGCCAATAACTTGCTCGAATCGGGAGTACATGGGGGCCTGATGGC
droFic1	scf7180000453815:55734-55865 +		-----------------------------------AGCATCGGACTGAAGGTGAGTATCGTAGCCAGAAGGAAT--TAC-CTATTTC--------------------GG----------ATACAAATT------------------A--------------------------------------ATG------------------------------------------------------------------------------------------------------------TTCAATATCTT---CTCACAGGAATATGCCAACAACTTGCTCGAATCGGGAGTGCATGGGGGCTTAATGGC
droEle1	scf7180000490640:403349-403404 +		TCTGGAGCAACGAGCGGGTCATACGGTGGGTGAGCAGTATCGGATTGAAGGTG----------------AGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1	scf7180000302422:2489411-2489477 +		AACCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCG---TTTTTAGGAATATGCCAATAACTTGCTCGAATCGGGAGTGCATGGAGGACTGATGGC
droTak1	scf7180000415399:1450478-1450595 +		TTTGGAGCAACGACCGAGTCATACGGTGGGTGGGCAGTATCGGATTGAAGGTG----------------GGTGTTTCTAGGTGATTCATGAGAGAATCTTAAGCTTAAA----------ATATACTTT------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------CCG---TTTACAGGAATA---------------------------------------------
droEug1	scf7180000409463:44581-44647 -		TAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAT---TTTTCAGGAATATGCCAACAACTTGCTCGAATCGGGAGTGCATGGGGGATTGATGGC
dm3	chr2L:6730317-6730397 +		TCTGGAGCAACGAGAGAGTTATCCGATGGGTTGGCAGCATCGGATTGAAGGTG----------------AGTGTGT------------------------CAGCTTAGA----------AAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAAGGA
droSim2	2l:6503791-6503848 +		TCTGGAGCAACGAGAGAGTCATCCGATGGGTGGGCAGCATCGGATTGAAGGTG----------------AGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2	scaffold_3:2269022-2269079 +		TCTGGAGCAACGAGAGAGTCATACGATGGGTGGGCAGCATCGGATTGAAGGTA----------------AGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3	2L:6181602-6181659 -		TCTGGAGCAACGAGAGAGTCATCCGGTGGGTGGGCAGCATCGGATTGAAGGTG----------------AGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2	scaffold_4929:15646798-15646897 +		CAAAAAAAAAAAAATAAACTCGGAATGAAACTAACAACTGCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGGAATATGCCAATAACTTGCTCGAATCGGGAGTTCATGGAGGATTGATGGC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

TGTGGAGCAATGAGCGTGTCATACGCTGGGTGGGCAGCATAGGACTGAAGGTG----------------AGTGTTGAGAGCTGAGT------------TTGAGCTTAGATTTTGTTGAGAAATATCC-AGGAATAAGAGCACAAGTAGACTTTGGTTTTGCTTGCATTATCGCATTTTTTCATTGCTTATAATTCTCAATGAGTTCAAGCTACGAATGAGGGACAAACCCCTGCAAGCCTAGGGTCGATAGTAAAAACTTCTGACAAAATAAGTTATATGATTTGAAAATGTAACCATAA---T-CT---TCCCCAGGAATATGCCAATAACTTGCTCGAATCAGGTGTCCATGGTGGTCTGATGGC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...........................GGGTGGGCAGCATAGGACTGAA..............................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.GTGGAGCAATGAGCGTGTC...........................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................GGCAGCATAGGACTGAAG.............................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TGTGGAGCAATGAGCGTGTCATACGATGGGTGAGCAGCATAGGGTTGAAGGTG----------------GGTATTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAA-----G---------------------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.................GTCATACGATGGGTGAGCAG..........................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1

droGri2

A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAATATGCCAATAACTTGCTCGAATCAGGCGTGCATGGTGGTCTGATGGC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...........................................................................................................................................................................................................................................................................................................................................................GTGCATGGTGGTCTGATG..	18	1	1.00	1	1	0

droWil2

TAGATTATAAATTGT-------------------------------------------------------------------------------------------AAA----------ATGTAT-TT------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------T-CT---ATGCCAGGAATATGCCAACAACTTGCTCGAATCGGGTGTGCATGGCGGCCTGATGGC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................................................................................................................................................................................................................................................................................................................CGAATCGGGTGTGCATGGCGGCC.......	23	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................CGAATCGGGTGTGCATGGCGGC........	22	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................CGAATCGGGTGTGCATGGC...........	19	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTCGAATCGGGT....................	18	1	1.00	1	0	0	0	1	0

dp5

TGTGGAGCAATGAACGCGTCATACGCTGGGTGGGCAGCATAGGACTTAAAGTA----------------AGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGAGTG---------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.........................CTGGGTGGGCAGCATAGGACTTAAA.............................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

TGTGGAGCAATGAACGCGTCATACGCTGGGTGGGCAGCATAGGACTTAAAGTA----------------AGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGAGTG---------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
....................ATACGCTGGGTGGGCAGCATAGGAC..................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0

droAna3

A----------------------------------AGCATCGGACTTAAGGTA----------------GAAACTCTACTGTATTTT--------------------GA----------ATAGATA-----AA-------------------------------------------TAACAATTGATT------------------------------------------------------------------------------------------------------------ATAATTATATTTAATTCAAAGGAATACGCCAACAACTTGCTGGAATCTGGGGTACATGGGGCTCTGATGGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................................................................................................................................................................................................................................................................................................TAATTCAAAGGAATACGCCAACAACT..................................	26	1	55.00	55	25	30	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCTGATGG.	25	1	27.00	27	23	3	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGG..........	25	1	27.00	27	24	2	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGG............	23	1	26.00	26	19	4	2	0	1	0
...................................................................................................................................................................................................................................................................................................................TAATTCAAAGGAATACGCCAACAAC...................................	25	1	23.00	23	12	11	0	0	0	0
.............................................................................................................................................................................................................................................................................................................TATATTTAATTCAAAGGAATACGCC.........................................	25	1	21.00	21	0	21	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTATATTTAATTCAAAGGAATACGCC.........................................	26	1	20.00	20	0	20	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TACGCCAACAACTTGCTGGAATCTGG.....................	26	1	17.00	17	12	2	3	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGG...........	24	1	16.00	16	10	5	1	0	0	0
................................................................................................................................................................................................................................................................................................................................TACGCCAACAACTTGCTGGAATCTGGGG...................	28	1	15.00	15	15	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACATG.............	25	1	15.00	15	14	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACATGG............	26	1	13.00	13	11	2	0	0	0	0
.....................................CATCGGACTTAAGGTA----------------GAAACTCTAC................................................................................................................................................................................................................................................................................................	26	1	13.00	13	11	2	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................AAAGGAATACGCCAACAACTTGCTGG............................	26	1	12.00	12	7	5	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGG............	22	1	11.00	11	10	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGGC.........	26	1	10.00	10	9	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGGGGC.........	25	1	10.00	10	9	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................TAATTCAAAGGAATACGCCAACAACC..................................	26	1	10.00	10	0	10	0	0	0	0
....................................GCATCGGACTTAAGGTA----------------GAAACTCTAC................................................................................................................................................................................................................................................................................................	27	1	9.00	9	4	4	1	0	0	0
.........................................................................................................................................................................................................................................................................................................TAATTATATTTAATTCAAAGGAATACGCC.........................................	29	1	8.00	8	0	8	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCTGATGGC	26	1	8.00	8	8	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGGGGCTC.......	27	1	8.00	8	8	0	0	0	0	0
......................................................................................T--------------------GA----------ATAGATA-----AA-------------------------------------------TAACAATTGATT------------------------------------------------------------------------------------------------------------ATAAT..................................................................	29	1	8.00	8	1	7	0	0	0	0
......................................................................................................................................................................................................................................................................................................................TTCAAAGGAATACGCCAACAACTTGC...............................	26	1	7.00	7	6	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................TATTTAATTCAAAGGAATACGCCAACAAC...................................	29	1	7.00	7	4	3	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................ACTTGCTGGAATCTGGGGTACATGG............	25	1	6.00	6	5	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCTGATG..	24	1	6.00	6	5	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AACAACTTGCTGGAATCTGGGGTA.................	24	1	6.00	6	2	4	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................ACTTGCTGGAATCTGGGGTACATG.............	24	1	6.00	6	5	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................CAACTTGCTGGAATCTGGGGTACATG.............	26	1	6.00	6	5	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGGGGCTCTGA....	27	1	5.00	5	5	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGTACATG.............	27	1	5.00	5	4	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................AAGGAATACGCCAACAACTTGCTGG............................	25	1	5.00	5	1	4	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATG.............	22	1	5.00	5	5	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................TAATTCAAAGGAATACGCCAACAACTTGC...............................	29	1	5.00	5	3	2	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGGGGCTC.......	24	1	4.00	4	2	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGTACATGG............	28	1	4.00	4	4	0	0	0	0	0
.......................................TCGGACTTAAGGTA----------------GAAACTCTACTGTA............................................................................................................................................................................................................................................................................................	28	1	4.00	4	3	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATG.............	21	1	4.00	4	4	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................TAATTCAAAGGAATACGCCAACAACTTG................................	28	1	4.00	4	2	2	0	0	0	0
.............................................................................................................................................................................................................................................................................................................TATATTTAATTCAAAGGAATACGCCAAC......................................	28	1	4.00	4	0	4	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGGCTC.......	28	1	4.00	4	4	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACAT..............	24	1	4.00	4	0	3	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................AAAGGAATACGCCAACAACTTGCTG.............................	25	1	4.00	4	4	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGGGGC.........	22	1	4.00	4	2	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AACAACTTGCTGGAATCTGGGGTAC................	25	1	4.00	4	2	2	0	0	0	0
........................................................................................................................................................................................................................................................................................................................CAAAGGAATACGCCAACAACTTGCTGG............................	27	1	4.00	4	2	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................TCAAAGGAATACGCCAACAACTTGCTGG............................	28	1	3.00	3	2	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGGGGCTCTG.....	26	1	3.00	3	2	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................AAAGGAATACGCCAACAACTTGCTGGA...........................	27	1	3.00	3	2	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................TTAATTCAAAGGAATACGCCAACAACT..................................	27	1	3.00	3	1	2	0	0	0	0
....................................................................................................................................................................................................................................................................................................................AATTCAAAGGAATACGCCAACAACT..................................	25	1	3.00	3	2	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................TTCAAAGGAATACGCCAACAACTTGCTG.............................	28	1	3.00	3	3	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACATGGG...........	27	1	3.00	3	2	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AACAACTTGCTGGAATCTGGGGT..................	23	1	3.00	3	0	3	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGGGG..........	24	1	3.00	3	3	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AACAACTTGCTGGAATCTGGGGTACATG.............	28	1	3.00	3	3	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGT..........	25	1	3.00	3	2	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGGGGCT........	26	1	3.00	3	2	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................GGAATCTGGGGTACATGGGGCTCTGA....	26	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................TCAAAGGAATACGCCAACAACTTGCTG.............................	27	1	2.00	2	2	0	0	0	0	0
...................................AGCATCGGACTTAAGGTA----------------GAAACTC...................................................................................................................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................AAGGAATACGCCAACAACTTGCTG.............................	24	1	2.00	2	1	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................ACTTGCTGGAATCTGGGGTACATGGG...........	26	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGG....................	20	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................AATACGCCAACAACTTGCTGGAATCT.......................	26	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGGGGCTCT......	25	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GAATCTGGGGTACATGGGGCTCTG.....	24	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGGGGCT........	23	1	2.00	2	1	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TACGCCAACAACTTGCTGGAATCTGT.....................	26	1	2.00	2	0	1	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GCTGGAATCTGGGGTACATGGGGC.........	24	1	2.00	2	1	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................ATTTAATTCAAAGGAATACGCCAAC......................................	25	1	2.00	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGTACAT..............	26	1	2.00	2	0	2	0	0	0	0
..................................................................................................................................................................................................................................................................................................................TTAATTCAAAGGAATACGCCAACAAC...................................	26	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................CAACTTGCTGGAATCTGGGGTACAT..............	25	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................ACTTGCTGGAATCTGGGGTACA...............	22	1	2.00	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGC..................	22	1	2.00	2	0	2	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGGGT..........	24	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................AAGGAATACGCCAACAACTTGCT..............................	23	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGTA.................	23	1	2.00	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................AAAGGAATACGCCAACAAC...................................	19	1	2.00	2	2	0	0	0	0	0
.....................................CATCGGACTTAAGGTA----------------GAAACTCTACT...............................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGGCT........	27	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TACGCCAACAACTTGCTGGAATCTG......................	25	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TACGCCAACAACTTGCTGGAATCTGGG....................	27	1	2.00	2	1	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGGG...........	23	1	2.00	2	1	1	0	0	0	0
....................................GCATCGGACTTAAGGTA----------------GAAACTCTA.................................................................................................................................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
....................................GCATCGGACTTAAGGTA----------------GAAACTCT..................................................................................................................................................................................................................................................................................................	25	1	2.00	2	1	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCTGATGGA	26	1	2.00	2	1	1	0	0	0	0
....................................GCATCGGACTTAAGGTA----------------GAAACTCTACT...............................................................................................................................................................................................................................................................................................	28	1	2.00	2	1	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................CAACTTGCTGGAATCTGGGGTA.................	22	1	2.00	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACA...............	23	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TACATGGGGCTCTGATGG.	18	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................ACATGGGGCTCTGATGGC	18	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................GAATACGCCAACAACTTGCTGGAAT.........................	25	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TATTTAATTCAAAGGAATACGCCAAC......................................	26	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGA..........	25	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................CAAAGGAATACGCCAACAACTTGC...............................	24	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGA............	23	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGG...................	19	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................ACTTGCTGGAATCTGGGGTACATGGGG..........	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTATATTTAATTCAAAGGAATACGC..........................................	25	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................TCAAAGGAATACGCCAACAACTTG................................	24	1	1.00	1	0	1	0	0	0	0
.......................................TCGGACTTAAGGTA----------------GAAACTCTACTG..............................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................ATCTGGGGTACATGGGGCT........	19	1	1.00	1	0	0	1	0	0	0
.....................................CATCGGACTTAAGGTA----------------GAAACTCT..................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTAC................	22	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................TTCAAAGGAATACGCCAACAACTTGCTGG............................	29	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................CAACTTGCTGGAATCTGGGG...................	20	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................GGAATCTGGGGTACATGGGGCTCC......	24	1	1.00	1	0	1	0	0	0	0
.....................................................................................TT--------------------GA----------ATAGATA-----AA-------------------------------------------TAACAATTGATT------------------------------------------------------------------------------------------------------------AT.....................................................................	27	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................AAGGAATACGCCAACAACTTGC...............................	22	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................TTCAAAGGAATACGCCAACAACTTGCT..............................	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGAA..........	25	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................ATTATATTTAATTCAAAGGAATACGC..........................................	26	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................AATTATATTTAATTCAAAGGAATACGC..........................................	27	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................CAAAGGAATACGCCAACAACTTGCTGGA...........................	28	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGGT.........	26	1	1.00	1	0	1	0	0	0	0
.........................................GGACTTAAGGTA----------------GAAACTCTACTGTA............................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................TTTAATTCAAAGGAATACGCCAACAACT..................................	28	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................ATTCAAAGGAATACGCCAACAACT..................................	24	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................CAACAACTTGCTGGAATCTGGGGTAC................	26	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................AAAGGAATACGCCAACAACTT.................................	21	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................AGGAATACGCCAACAACTTGCTGGAAT.........................	27	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACATT.............	25	1	1.00	1	0	1	0	0	0	0
........................................CGGACTTAAGGTA----------------GAAACTCTACTG..............................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AACAACTTGCTGGAATCTGGGG...................	22	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGT............	22	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACATGC............	26	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACATGGGG..........	28	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGTACA...............	25	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................CAACTTGCTGGAATCTGGGGTAC................	23	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................AATACGCCAACAACTTGCTGGAATCTG......................	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACATGGGGCAA.......	28	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................TGCTGGAATCTGGGGTACATGGGGCTT.......	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACA...............	20	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TATTTAATTCAAAGGAATACGCCAACA.....................................	27	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................TTAATTCAAAGGAATACGCC.........................................	20	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCTGATGT.	25	1	1.00	1	0	0	1	0	0	0
A----------------------------------AGCATCGGACTTAAGGTA----------------GA........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................AATTCAAAGGAATACGCCAACAACTTG................................	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTACAT..............	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GCTGGAATCTGGGGTACATGGGGCTC.......	26	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................AGGAATACGCCAACAACTTGCTGG............................	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................ACGCCAACAACTTGCTGGAATCTGG.....................	25	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGT..................	20	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................AACAACTTGCTGGAATCTGGGGTACA...............	26	1	1.00	1	1	0	0	0	0	0
...................................AGCATCGGACTTAAGGTA----------------GAAAA.....................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCT......	20	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................GCCAACAACTTGCTGGAATCTGGGGT..................	26	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTA.................	21	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TACATGGGGCTCTGATGGC	19	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGTAC................	24	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................ATATTTAATTCAAAGGAATACGCC.........................................	24	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................ATCTGGGGTACATGGGGCTCTGATGG.	26	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................ATTTAATTCAAAGGAATACGCC.........................................	22	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCTG.....	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................CTGGGGTACATGGGGCTCTGATGGC	25	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TATTTAATTCAAAGGAATACGCC.........................................	23	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTGCTGGAATCTGGGGTA.................	18	1	1.00	1	0	1	0	0	0	0
.......................................TCGGACTTAAGGTA----------------GAAACTCTACTGT.............................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................TTCAAAGGAATACGCCAACAACT..................................	23	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGG............	19	1	1.00	1	0	1	0	0	0	0
......................................ATCGGACTTAAGGTA----------------GAAACTCTAC................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................AATTATATTTAATTCAAAGGAATACGCC.........................................	28	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGG...................	21	1	1.00	1	1	0	0	0	0	0
......................................................................................T--------------------GA----------ATAGATA-----AA-------------------------------------------TAACAATTGATT------------------------------------------------------------------------------------------------------------A......................................................................	25	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTTGCTGGAATCTGGGGTACAG..............	24	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................AACAATTGATT------------------------------------------------------------------------------------------------------------ATAATTATATTTAAT........................................................	26	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................AAGGAATACGCCAACAACTTGCTGGAA..........................	27	1	1.00	1	1	0	0	0	0	0
.....................................CATCGGACTTAAGGTA----------------GAAACTC...................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................TACGCCAACAACTTGCTGGAAT.........................	22	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................AATCTGGGGTACATGGGGC.........	19	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................ACTTGCTGGAATCTGGGGTACATGGGGC.........	28	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ACAACTTGCTGGAATCTGGGGTACAC..............	26	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................CAAAGGAATACGCCAACAACT..................................	21	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TCTGGGGTACATGGGGCTCTGA....	22	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................TCAAAGGAATACGCCAACAACTTGC...............................	25	1	1.00	1	0	1	0	0	0	0
...................................AGCATCGGACTTAAGGTA----------------GAAACTCTAC................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TGGAATCTGGGGTACATGGGG..........	21	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................AAAGGAATACGCCAACAACTTGCT..............................	24	1	1.00	1	1	0	0	0	0	0
.....................................CATCGGACTTAAGGTA----------------GAAACTCTACTG..............................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0

droBip1

TTATA------------------TTATTTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATCATTTT---TTTTAAGGAATACGCTAACAACTTGCTCGAATCTGGGGTACATGGGGCCCTGATGGC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGGAATATGCCAATAACTTGCTCGAATCGGGAGTACATGGGGGCCTGATGGC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

-----------------------------------AGCATCGGACTGAAGGTGAGTATCGTAGCCAGAAGGAAT--TAC-CTATTTC--------------------GG----------ATACAAATT------------------A--------------------------------------ATG------------------------------------------------------------------------------------------------------------TTCAATATCTT---CTCACAGGAATATGCCAACAACTTGCTCGAATCGGGAGTGCATGGGGGCTTAATGGC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TCTGGAGCAACGAGCGGGTCATACGGTGGGTGAGCAGTATCGGATTGAAGGTG----------------AGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AACCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCG---TTTTTAGGAATATGCCAATAACTTGCTCGAATCGGGAGTGCATGGAGGACTGATGGC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TTTGGAGCAACGACCGAGTCATACGGTGGGTGGGCAGTATCGGATTGAAGGTG----------------GGTGTTTCTAGGTGATTCATGAGAGAATCTTAAGCTTAAA----------ATATACTTT------------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------CCG---TTTACAGGAATA---------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAT---TTTTCAGGAATATGCCAACAACTTGCTCGAATCGGGAGTGCATGGGGGATTGATGGC	Size	Hit Count	Total Norm	Total
No Reads

dm3

TCTGGAGCAACGAGAGAGTTATCCGATGGGTTGGCAGCATCGGATTGAAGGTG----------------AGTGTGT------------------------CAGCTTAGA----------AAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAAGGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................AGTTATCCGATGGGTTGGCAGCATCG.....................................................................................................................................................................................................................................................................................................................................	26	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GAGAGAGTTATCCGATGGGTTGGC............................................................................................................................................................................................................................................................................................................................................	24	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................ATCCGATGGGTTGGCAGCATCG.....................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................TTATCCGATGGGTTGGCAGC.........................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGGGTTGGCAGCATCGGATTGAAGGAA----------------..........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TGGAGCAACGAGAGAGTTATCCGATGGG.................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............GAGAGTTATCCGATGGGTTGGCAGC.........................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
......GCAACGAGAGAGTTATCCGATGGGT................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................GTTATCCGATGGGTTGGCAG..........................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TGGCAGCATCGGATTGAAGGAA----------------..........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GATGGGTTGGCAGCATCGGATTGAAG.............................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TGGCAGCATCGGATTGAAG.............................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0

droSim2

TCTGGAGCAACGAGAGAGTCATCCGATGGGTGGGCAGCATCGGATTGAAGGTG----------------AGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.................GTCATCCGATGGGTGGGCA...........................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

TCTGGAGCAACGAGAGAGTCATACGATGGGTGGGCAGCATCGGATTGAAGGTA----------------AGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................GGCAGCATCGGATTGAAGG............................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	2	0
....................ATACGATGGGTGGGCAGC.........................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1
...................CATACGATGGGTGGGCAGC.........................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
.................................GCAGCATCGGATTGAAGG............................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.............................GTGGGCAGCATCGGATTGAAGG............................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0

droYak3

TCTGGAGCAACGAGAGAGTCATCCGGTGGGTGGGCAGCATCGGATTGAAGGTG----------------AGTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................CCGGTGGGTGGGCAGCATCGG....................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

CAAAAAAAAAAAAATAAACTCGGAATGAAACTAACAACTGCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGGAATATGCCAATAACTTGCTCGAATCGGGAGTTCATGGAGGATTGATGGC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.................................................................................................................................................................................................................................................................................................................................................CGAATCGGGAGTTCATGGAG..........	20	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................CGGGAGTTCATGGAGGATTGATG..	23	1	1.00	1	1	0	0	0	0	0	0

dvi_10319

scaffold_12963:3350610-3350840 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads