ID:

dvi_1030

 Coordinate:

scaffold_12472:258682-258863 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.3 -23.8 -23.8

Flybase annnotation

exon [dvir_GLEANR_3341:1]; CDS [Dvir\GJ18544-cds]; exon [dvir_GLEANR_3341:2]; CDS [Dvir\GJ18544-cds]; intron [Dvir\GJ18544-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGACTGAATCAACAAAGCCATTGCTGGGCTCGTGCTTAGCCATTGTTGCGGTAAGTCGACGTGTTCTGCCCGCACCCGCTCAATCAGTGCGACTGTGACTCGACCGGCTAAGACGTGGAAATATTGAAGCTTTTGTCAATGGCCATTCGACATGTGACAAGTGCATCAAAATTTTCAATAGCTGAACTTAAGCAGAGTGTAAATAATGTTGTATACCTTATGCTTATTCCAGGTTCTTCATGTCCTTTACCAACCAACAGATGCGTCTGGTGCGCTGCCCAT
************************************************************************************************************.......(((((((.((((.((.((((((((((.........))).))))))).)).)))).)))))))..............((((((.(((.(((....))).)))))).)))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 V047
embryo
 M028
head
 M047
female body
 M061
embryo
 SRR060659
Argentina_testes_total
 SRR060667
160_females_carcasses_total
 SRR060675
140x9_ovaries_total
 V116
male body		 M027
male body		 SRR060654
160x9_ovaries_total
 SRR060669
160x9_females_carcasses_total
 SRR060670
9_testes_total
 SRR060678
9x140_testes_total
 SRR060680
 9xArg_testes_total
 SRR060681
Argx9_testes_total
 SRR060689
160x9_testes_total
 SRR1106730
embryo_16-30h
 SRR060684
140x9_0-2h_embryos_total
 SRR060687
9_0-2h_embryos_total
 SRR060664
9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR1106720
embryo_8-10h
......................................GCCATTGTTTCGGTAAGTCGA............................................................................................................................................................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................CAACAGATGCGTCTGGTGCGCT...... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............AAGCCATTGCTCGGCTCGTGCTT..................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................GCCATTGTTTCGGTAAGTCGG............................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................CAACCAACAGATGCGTCTGGT........... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TACCAACCAACAGAGGCGTCTGGTGCGC....... 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................CTTCATGTCCTTTACCAACCAACAG...................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................GTGCTTAGCCATTGTTGCGG....................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................TTACCAACCAACAGATGCGTCTGGTGC......... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................ACCAACAGATGCGTCTGGTGCG........ 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TAAGACGTGGAAATATTGAAG......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ATAATGTTGTATACCTTATGC........................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................TCCTTTACCAACCAACAGATGCGTCTG............. 27 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................GAAATATTGAAGCTTTTGTC................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................AGTGCGACTGTGACTCGACC................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AATGGCCATTCGACATGTGACAAGT........................................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................AACCAACCAACAGATGCGCCT.............. 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................GTCCTTTACCAACCAACAGATGCGTCTG............. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................CAACAGATGCGTCTGTTGCGCT...... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TACCCGCACCCGCTCAATCAGTGCGACTGTGACTCGACCGGC.............................................................................................................................................................................. 42 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................TACCAACCAACAGATGCGTCTGGTGCGC....... 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTATACCTTATGCTTATTCCAGGTT............................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................GATTCGTCTGGTGCGCTGCC... 20 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................CAACAGATGCGTCTGGTGCGC....... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................TGACTCGACCGGCTAAGACGT...................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.............AAAGCCATTGCTGGGCTCGTG........................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............AAGCCATTGCTGGGCTCGTGCGT..................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................ACACAGATGCGTCTGGTGCGCCGCC... 25 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............AAGCCATTGCTCGGCTCATCCTT..................................................................................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................GTAAGTCGACGTGTTCTGCCCG.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................CTGGGCTCGTGCTTAGCC................................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................ATTGCTGGGATCGTGGTTAGT.................................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................................................................ATTGAAGCTTTGGACAATGGT........................................................................................................................................... 21 3 6 0.50 3 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 1 0
..................................................................................................................................................................................................................................TTGCAGGTTCTTCCTGTC...................................... 18 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTGCAGGTTCTTCCTGTCCGT................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
....................TTGCTGGGCTCGTGCTTG.................................................................................................................................................................................................................................................... 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATCAGCGTGTAAATAATGT......................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................CGACATGTTCTACCCGGACC.............................................................................................................................................................................................................. 20 3 6 0.17 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................................................AGGTTCTTCCTGTCCGTTTC................................ 20 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACTGACTTAGTTGTTTCGGTAACGACCCGAGCACGAATCGGTAACAACGCCATTCAGCTGCACAAGACGGGCGTGGGCGAGTTAGTCACGCTGACACTGAGCTGGCCGATTCTGCACCTTTATAACTTCGAAAACAGTTACCGGTAAGCTGTACACTGTTCACGTAGTTTTAAAAGTTATCGACTTGAATTCGTCTCACATTTATTACAACATATGGAATACGAATAAGGTCCAAGAAGTACAGGAAATGGTTGGTTGTCTACGCAGACCACGCGACGGGTA
***********************************************************.......(((((((.((((.((.((((((((((.........))).))))))).)).)))).)))))))..............((((((.(((.(((....))).)))))).)))************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 V047
embryo
 V053
head
 M027
male body		 M047
female body
 SRR060673
9_ovaries_total
 SRR060681
Argx9_testes_total
 SRR1106729
mixed whole adult body
 V116
male body		 SRR060682
9x140_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060662
9x160_0-2h_embryos_total
 SRR060686
Argx9_0-2h_embryos_total
...........................................................................GGCGAGTTAGTCACGCTGA............................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTAGTCACGCTGACACTGAGC.................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................AATGGTTGGTTGTCCACGG................. 19 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................CGCTGACACTGAGCTGGCCGG............................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................GCGTGGGCGAGTTAGTCA.................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................CGAATAAGGTCCAAGAAGTA......................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................GTTGGTTGTCTACGCAGACCA........... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................TGAGCTGGCCGATTCTGCACC.................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................CGGGTTAGTCACGCCGACACT........................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........TTGTTGCGGTAGCGACCCTAG........................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................................................CGCAGAGAACGCGACGGGTA 20 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................CGAGTGAGTCACGCCAACACT........................................................................................................................................................................................ 21 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................CCGGAAATGGGTGGTTGT....................... 18 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TTAGTCACATTGACACTGA...................................................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................GATCCAAGAGTTACAGGAAA.................................. 20 3 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................................................................................................................ACGGCATACGAATGAGGTC.................................................. 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................................................................CGAATATGGTCTAAGAAGCA......................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12472:258632-258913 + dvi_1030 TGAC-------------------------TGAATCAACAA------AGCCATTGCTGGGCTCGTGCTTAGCCATTGTTGCGGTAAGT------------CGACGTGTTCTGCCCG-------------------------------------------------------------CACCCGCTCAATCAGTGCGACTGTGACTCGACCGGCTAAGACGTGG--------AA-ATA----T------------------TGAA-----------------------GCT---TTTGTC-------AATGGCCATT---------CGACATGTGACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GCATCAAAATTTTCAATAGCTGAACT-------TAAGCAGAGTG--------TAAATAATG-------T-TG---TATACCTTAT-GCTTATTCCAGGTTCTTCATGTCCTTTACCAA------CCAACAGA------------TGCGTC---TGGTGCGCTGCCCAT
droMoj3 scaffold_6308:3222560-3222884 - TGAC-------------------------CGAATCCATAA------AGCCATTGCTGGTCTCCTGCTTAGCCATTGTTGCGGTAAGT------------CGACGTGTTCTACCCGCAC-------------CCGCT-----------------------------------------------CGAATCAGAGCGACGGTGAGTCGGCCGGCTAAGACGTGG--------AA-ATG----TCTC-----------------AA-----------------------GCTTGTTTGGTCAATGATCAGTGGCCAATGACCA-AAGCGACATGTGACAAATGACCTGTGAATCAATACATA--TTCGAGCTCACT-------------------------------GGA-------------------------------ATATG---ATCAA-------------------------------------------------------------------------------------------CT-------------------------AATGAATGAGTGGTT---ATTGT-TT---TCTGCCTTAT-GCTAATTTCAGGTTCTACATGTCCTTTACCAGCC------AACAGA------------TGCGACTGGTGGTGCGTTGCCCCT
droGri2 scaffold_15203:4725331-4725591 - TGAC-------------------------CGAATCAACTA------AGCCATTGCTCTGCTCGTGCTTAGCCATTGTTGCGGTAAGTCAAGTTCTACGTCGACGTGTTCTACCCGC-------------------------------------------------------------ACCCGCTCATTCGGCGTGACTCTCGCTCGACCCGACCCGACCCGGCGTCA---GC-TGA----ATTGGATGGATC------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTGCTGGG----------------------------------------------------------------------------------------------------ATACTAGTTTACC---AC------GTT----TTTCTTAATTGATTGCAGGTTCTACATGTCCTTTACCAACC------AACAGATGCGTCGTCTTCTGCGAC---CGGTGCGCTGGCACT
droWil2 scf2_1100000004909:6542558-6542848 - AAAA---------------------TGATTCAAACAAGAAGTA---GTCCACTGCTGGGACCGTGCTTAGCTTTAGTTGCGGTAAGT------------CGACGTGTTCG-TGTCGTCT--GCTAC---CGC---------------------------------------------CGTCGCTGAATCACAA---------------------------------------------TCGC-CC----AATATAAT----------------------------------------------------------------GAGCAAA-------------------------------AAGTGAT--------------------------------------GACCGGCTCT-CTGCAG-------------------------------------ACCGACC----GA-------------------------------------------------AA-GCAACAACAACAACAACAACTGTGTT-------GATCGAGAGC---TACAATTGAATTGGG---ATCTT---TTA----TATTTTGTATGTTTTCAGGTTCTTCATGTTTTCCATCATCCTACCCCAACAGA------------TG------CTGGTGCGGTGCCTAT
dp5 XL_group1e:10407808-10408138 + TGAT-------------------------TGAAGCAAGAA------TTCATAAGCTGGGGCCCAGCATAGCTCTGCTAGCGGTGAGT------------CGACGTGTTCTAATGCCGCGGAA--AAC--ACTGGCTGGACGATGG-CAGAC----------GGCGGGGCGGT---T-GCTCGGTCGGTCGCCCGG----------------CTTAGGCATGA--------AA-ATA----ATTCGAAAGATG------C-----------------------------T---GTCGCC------CGG--------------------------------------------------------------------------------------------C--GG------------------------------------------------------CCCGCCC------------GCCTGTGTTTGTAACTCCACACCCATACACATCATCCCACC----------CATCATTCCAATGCCT-------------------------AAAAACTAAGTGGCG---CG------A------TTTTATGCATAATTCCAGATACTTCATCTCCTGCAACATCCAGCGGCCACAGA------------TGCGGG---GGGAGCGGTGCCTAT
droPer2 scaffold_69:111562-111902 - TGAT-------------------------TGAAGCAAGAA------TTCATAAGCTGGGGCCCAGCATAGCTCTGCTAGCGGTGAGT------------CGACGTGTTCTAATGCCGCGGAA--AACACACTGGCTGGACGATGG-CAGAC----------GGCGGGGCGGT---T-GCTCGCTCGTTCCCCCGG----------------CTTAGGCATGA--------AA-ATA----ATTCGAAAGATG------C-----------------------------T---GTCGCC------CGG--------------------------------------------------------------------------------------------T--GG------------------------------------------------------CCCGCCC------------GCCTGTGTTTGTAACTCCACGCCCATACACAGCATCCCACCACACAGCA--CACCACTCCAATGTCT-------------------------AAAAACTAAGTGGCG---CG------A------TTTTATGCATAATTCCAGATACTTCATCTCCTGCAACATCCAGCGGCCACAGA------------TGCGGG---GGGAGCGGTGCCTAT
droAna3 scaffold_13137:1176935-1177247 + TGAT-------------------------CGAGGCGAGAA------TCCGAAAGCTCGGACCCTGTGTGGCCCTTGTTGCGGTAAGT------------CGACGTGTTCCGTTTTTGCGATT--TTA------------------------------------------GGCG------AAGTTGAATCAGCAGC----------------C-----------G---C------------------------------------------------------------------------------------------CAGTGGCGGCATGCAGCGGTCATA---------ATTAAAAAATGTAAAAA-----TTGGCATTCAAGACATTGTTTTCTGATCTGC------------------------------------------------------TACGGCTGTCGGGAACTTC------------------------------------CCCCTACACTGCT----------------------TTGCGTTTGC--------TCCTACTACTAAGTCCCT---CT------CTT----CTTTCTGTTCCATCTTAGGTTCTGCAACTCCTTCAGCAGCCATCGACAGTAGA------------TG------CGGGGGCCGTGGCCAT
droBip1 scf7180000393699:54811-55112 - TGAT-------------------------CGAGGCGAGAA------TCCAAAAGCTTGGACCCTGTGTGGCCCTGGTTGCGGTAAGT------------CGACGTGTTCCGCTTTTACGATT--TTC------------------------------------------GTCG------AAGATAAATCAGCAGG----------------C-----------G---C------------------------------------------------------------------------------------------CATGAGCGGCATGCGTCGGTCAAAATGAAA------------------AG-----TTTGCGTATAAGACCTTATTTTCTGAT--GT------------------------------------------------------TACGGCTGCCGGGAACTGT----------------------------------------------------------CCATTGCTTGGATTTGTGATAGT--------CTCAACTACTAAGCCGCT---GC------CTC----CTCTTTGTTCTATCTTAGATTCTACAACTCCTTCAGCAGCCATCAAGAATAGA------------TG------CGGGGGCCGTGGCCAT
droKik1 scf7180000302696:1030887-1031194 - TGAT-------------------------TGGAGCCAGAA------TCCGAAAGCTCGGGCCCTGCGTGGCCCTTGTTGCGGTGAGT------------CGACGTGTTCCGTTCCGTCC--GGTTC---TCG----------------GTT---TCCGA-----T---A-----------------CTCGGAT---------------------------------------------TCTC-CG----AA-----------------------------------TAAAGTACGGCGGGCGGCTGGTGGTCTGGTG--GCGGGCGGCATGCGACTTTCGGCGTGCGGTTAAGTAAAAA--ATCAACCACGCC-------------------------------GCCC-------------------------------------------------------------CGTACT--------------------------------------------------------------------------------TGTTGTTGTGG----CACACCAAGTCGCG---CTCGCT--T--TATCT-CCACATCTAATTCCAGGTGCTTCAGCTGCTCCATTCGGCAGCGCCAGCAGA------------TG------CGGGAGCCGTTCCCAT
droFic1 scf7180000453495:463198-463469 - TGAT-------------------------TGGAGCGAGAATCGGAATCGGAAAGCTCGGGCCCTGTGTGGCCCTAGTTGCGGTAAGT------------CGACGTGTTCTGTTCTGTTT--AGTCT---CGTTT----------T-TTTT--------------T---CGGCGGTTTTCCCACCGAATCAGAAC-----------------------------------------------------------------------------GATTAAGCATCC-----------C-------------------------------------------------------------------------------------------------------------GCCCGGCTTT-CTGCCCCATT--------------------------------------------------------ATGCATGGATGTT------------------------------------AGATGCCAAGACCT--------------------------AACATTGCG---CGGTGTT------T------TCTTTTCCCAAATTGCAGATTCTACAGCTCCTGCAGCATACCCAACCGGCCGA------------TT------CCGGAGCCGTTCCCAT
droEle1 scf7180000491182:89490-89760 + TGAT-------------------------TGGAGCCAGAATCGGAATCGGAAAGCTCGGGCCCTGTATGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGCTCTGTCT--GGTCT---GGTCT-GGTT-----CTCTTC--------------------TC---CCGCCCGCTGAATCATTTGG----------------C-----------GCAG-----------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------CCGGCTTT-ATGGCCCCTCGGA-------------------------------------GATCGGAACTGG------------------------------------CAC----TG-GCA---------------------CTGGCACTAGC--------A-CTAGCACTAAGTCGCA---CT------G------T-TTCT-TCCACTTCCAGGTTCTGCAGCTCCTCCAGCAGCCCCAGCCGGCTGA------------TT------GCGGAGCCGTGTCCAT
droRho1 scf7180000778073:5320-5597 + TGAT-------------------------TGGAGCCAGAAACGGAATCGGAAAGCTCGGGCCCTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGTTCTGTCT--GGTCT---GGTTC----------T-CTAC---------------------------TCCCGCTGATTCATTTGG----------------C-----------GTTG---GCAA-AAGAGGC-CG----ATTATGAG----------------------------------------------------------------GCCGT-----------------------------AA--AAGTCGAGC-AG-----------------------------------CCGGCTTT-GAGCCCCATCGCA-------------------------------------GATCGGAACT-----------------------------------------------------------------------------------------------TGCACTAAGTCGCG---CT------GTT----T-TTCT-TGCAACTCCAGGTTCTACAGCTCCTCCAGCAGCCCCAGCCGGCAGA------------TT------GCGGCGCTGTGCCCAT
droBia1 scf7180000302126:815480-815794 + CGACAC-ACAGAATTGGACC-AGGATGGTGGGAGCGAGAATCGGAATCGGAAAGCTTGGGCCCTGCGCGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGTTCCGTCC--GCTCG---TCTTT----------C-TTCCTACCGCTGCCGCCTGGCCCGGCGAATCCCCCGCCGAATCAGCATG----------------C----------------------------------------------------------------------------T---TTTCCC------------------------CCGA-----------------------------AA--ACGTCACAATTG-----------------------------------CCGGCTTT-TCGGCACCTCCCA-TCGCATCTAACCAT---CCCCACTAACCG---------------------------------------------------------------------------------GAACT----------------------------------------GGT--------G------TCC------TTCTTGCAGATTCTACAGCTCCTCCAGCACCTGCAGCCGGCCGA------------GTCCGC---CGGGGCCGTGCCCAT
droTak1 scf7180000415289:252273-252345 - CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-CGAAATTCCAGATTCTGCAGCTACTCCAGCTGACACAGCCCGCGGA------------AGCCGC---CGGAGCGGTGCCCAT
droEug1 scf7180000409008:1419560-1419875 + CTTCCCGTCTGAATCGGAATGACAATGTTTGGAGCGAGAA------TCGGAAAGCTTGGGCCGTGTATGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGTTCTGG------------------------------------------------------T---TCTAGCGCTGAATCAGAGGG----------------C-----------G---GCA---A-ACGAAAA-C--------ATGATAGGGGAATGGGGCTGGGGCAAT---------G---GTTTCT------------------------CCGA-----------------------------AA--AAGTCAACCAAG-----------------------------------CCGGCTTTTCTGTTTCATC---GAAGCAGCATATCTG---CTCAACTAACCA--------------------------------------------------------------------------------------------------------------------ATGCA---TGGT---------GT-----TCTTTT-TAAAATTCCAGATTCTACAGATCCTCCAGCAGACACACCCGGCAGA------------AGCCGC---TGGAGCCGTGCCCAT
dm3 chrX:16190109-16190370 - -----------------------------------------------------GCTTGGGCCGTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGTCT--GGTCA---TGTTG----------C-TGGTC----------ACTGGAGTGGC---TCACCCGCTCGATCAGCGGG----------------C-----------G---GGGAA-ACA----------------------GTGGGGAGGGGCCGGCCAGACAGCCCCGGCT---TT----------------------------------------------------------------------------------------------------------------------TTTTTGGCTCCCC---CTA-------ACCAAATAACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCCTAT-GGAATTTACAGATTCTACAGCTACTCCAGTACACACAGCCGGCCGA------------TGCCGC---CGGAGCCGTGCCCAT
droSim2 x:15309855-15310122 - dsi_8395 -----------------------------------------------------GCTTGGGCCGTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGTCT--GGTCA---TGTTGCTGGTC--------------GCTGGTCACTGGAGTGGC---TCACCCGCTCGATCAGCGGG----------------C-----------G---GGGAA-ACC----------------------GCGGGGAGGGGCCGGCCAGACAGCC---------------------------------------------------------------------------------------C-----------------------------------CCGGCTTTTCTGGCTCCCC---CTA-------ACCAAATAACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCCTAT-GGAATTTACAGATTCTACAGCTACTCCAGCACACACAGCCGGCAGA------------TGCCGC---CGGAGCCGTGCCCAT
droSec2 scaffold_17:16876-17144 - -----------------------------------------------------GCTTGGGCCGTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGTCT--GGTCA---TGTTGCTGGTC--------------GCTGGTCACTGGAGTGGC---TCACCCGCTCGATCAGCGGG----------------C-----------G---GGGAA-ACC----------------------GTGGGGAGGGGCCGGCCAGACAGCC---------------------------------------------------------------------------------------------------------------------------CCGGCTTTTCTGGCTCCCC---CTA-------ACCAAATAACTAACTAACCA-------------------------------------------------------------------------------GAGAACT----------------------------------------GAC--------A------TCCTAT-GGAATTTACAGATTCTACAGCTACTCCAGCACACACAGCCGGCAGA------------TGCCGC---CGGAGCCGTGCCCAT
droYak3 v2_chrX_random_001:33175-33250 - ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAT-GGAATTCGCAGATTCTACAGCTACTCCAGCACACACAGCCGGCTGA------------TGGCGC---CGGAGCCGTACCCAT
droEre2 scaffold_4690:10897405-10897662 + -----------------------------------------------------GCTTGGGCCCTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGCCT--GGTCA---TGTTT----------C-TTGTC----------ACTGGAGTGGC---G-GCCCGCTCGATCAGCGGA----------------C-----------G---GGGGA-ACA----------------------TTGGGGAGGGGCCGGTCAGACAGCC---------------------------------------------------------------------------------------------------------------------------CCGGCTTTTCTGGCTACC----CTA-------ACCAAAAAACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCTTAT-GGAATTTACAGATTCTACAGCTACTCCAGCACACACAGCCGGCTGA------------TGCCGC---CGGAGCCGTGCCCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGAC-------------------------TGAATCAACAA------AGCCATTGCTGGGCTCGTGCTTAGCCATTGTTGCGGTAAGT------------CGACGTGTTCTGCCCG-------------------------------------------------------------CACCCGCTCAATCAGTGCGACTGTGACTCGACCGGCTAAGACGTGG--------AA-ATA----T------------------TGAA-----------------------GCT---TTTGTC-------AATGGCCATT---------CGACATGTGACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-GCATCAAAATTTTCAATAGCTGAACT-------TAAGCAGAGTG--------TAAATAATG-------T-TG---TATACCTTAT-GCTTATTCCAGGTTCTTCATGTCCTTTACCAA------CCAACAGA------------TGCGTC---TGGTGCGCTGCCCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGA------------TGCGTC---TGGTGCGCT......2211.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------CCAACAGA------------TGCGTC---TGGT...........2111.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCATGTCCTTTACCAA------CCAACAG.....................................2511.001000000000000000000010000000000000000000000000000000000000000000
..............................................................GTGCTTAGCCATTGTTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCAA------CCAACAGA------------TGCGTC---TGGTGC.........2711.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CCAACAGA------------TGCGTC---TGGTGCG........2211.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TAAGACGTGG--------AA-ATA----T------------------TGAA-----------------------G....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATG-------T-TG---TATACCTTAT-GC................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTTACCAA------CCAACAGA------------TGCGTC---TG.............2711.001000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................G--------AA-ATA----T------------------TGAA-----------------------GCT---TTTGTC-------..................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................AGTGCGACTGTGACTCGACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................AATGGCCATT---------CGACATGTGACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-........................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTTTACCAA------CCAACAGA------------TGCGTC---TG.............2811.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAA------CCAACAGA------------TGCGTC---TGGTGCGC.......2811.001000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---TATACCTTAT-GCTTATTCCAGGTT....................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGA------------TGCGTC---TGGTGCGC.......2111.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TGACTCGACCGGCTAAGACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
......................................AA------AGCCATTGCTGGGCTCGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................GTAAGT------------CGACGTGTTCTGCCCG-------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
......................................................CTGGGCTCGTGCTTAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
...................................................TTGCTGGGCTCGTGCTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000000000000000000001000000000000000000000000000000000
droMoj3
TGAC-------------------------CGAATCCATAA------AGCCATTGCTGGTCTCCTGCTTAGCCATTGTTGCGGTAAGT------------CGACGTGTTCTACCCGCAC-------------CCGCT-----------------------------------------------CGAATCAGAGCGACGGTGAGTCGGCCGGCTAAGACGTGG--------AA-ATG----TCTC-----------------AA-----------------------GCTTGTTTGGTCAATGATCAGTGGCCAATGACCA-AAGCGACATGTGACAAATGACCTGTGAATCAATACATA--TTCGAGCTCACT-------------------------------GGA-------------------------------ATATG---ATCAA-------------------------------------------------------------------------------------------CT-------------------------AATGAATGAGTGGTT---ATTGT-TT---TCTGCCTTAT-GCTAATTTCAGGTTCTACATGTCCTTTACCAGCC------AACAGA------------TGCGACTGGTGGTGCGTTGCCCCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................CT-------------------------------GGA-------------------------------ATATG---ATCAA-------------------------------------------------------------------------------------------CT-------------------------AATG......................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGACTGGTGGTGCGTTGC....1911.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------------------------------------------------------------------------CT-------------------------AATGAATGAGTGGTT---ATTG....................................................................................................2311.001000001
.....................................................................................................................................................................................................................................................................................................................GCCAATGACCA-AAGCGAC...........................................................................................................................................................................................................................................................................................................................................................................1811.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGA------------TGCGACTGGTGGTGCGTT......2411.001000100
..............................................................CTGCTTAGCCATTGTTGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
TGAC-------------------------CGAATCAACTA------AGCCATTGCTCTGCTCGTGCTTAGCCATTGTTGCGGTAAGTCAAGTTCTACGTCGACGTGTTCTACCCGC-------------------------------------------------------------ACCCGCTCATTCGGCGTGACTCTCGCTCGACCCGACCCGACCCGGCGTCA---GC-TGA----ATTGGATGGATC------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTGCTGGG----------------------------------------------------------------------------------------------------ATACTAGTTTACC---AC------GTT----TTTCTTAATTGATTGCAGGTTCTACATGTCCTTTACCAACC------AACAGATGCGTCGTCTTCTGCGAC---CGGTGCGCTGGCACTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................CAACTA------AGCCATTGCTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATGCGTCGTCTTCTGCGAC---C..............2511.00101
droWil2
AAAA---------------------TGATTCAAACAAGAAGTA---GTCCACTGCTGGGACCGTGCTTAGCTTTAGTTGCGGTAAGT------------CGACGTGTTCG-TGTCGTCT--GCTAC---CGC---------------------------------------------CGTCGCTGAATCACAA---------------------------------------------TCGC-CC----AATATAAT----------------------------------------------------------------GAGCAAA-------------------------------AAGTGAT--------------------------------------GACCGGCTCT-CTGCAG-------------------------------------ACCGACC----GA-------------------------------------------------AA-GCAACAACAACAACAACAACTGTGTT-------GATCGAGAGC---TACAATTGAATTGGG---ATCTT---TTA----TATTTTGTATGTTTTCAGGTTCTTCATGTTTTCCATCATCCTACCCCAACAGA------------TG------CTGGTGCGGTGCCTATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................AAGAAGTA---GTCCACTGCTGGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTT-------GATCGAGAGC---TACAA.....................................................................................................................2011.00110000
....................................................TGCTGGGACCGTGCTTAGCTTTAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.........................................TA---GTCCACTGCTGGGACCGTGCTTAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.................................................CACTGCTGGGACCGTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGTT-------GATCGAGAGC---TACA......................................................................................................................2211.00100100
.....................................GAAGTA---GTCCACTGCTGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.............................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------GACCGGCTCT-CTGCAG-------------------------------------ACC......................................................................................................................................................................................................................................2011.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTACCCCAACAGA------------TG------CT..............2011.00100010
..............................................GTCCACTGCTGGGACCGTGCTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
........................................................GGGACCGTGCTTAGCTTTAGTTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGA------------TG------CTGGTGCGGT......1811.00100010
...............................AAACAAGAAGTA---GTCCACTGCTGGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
..........................................................GACCGTGCTTAGCTTTAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---TACAATTGAATTGGG---ATCTT---................................................................................................2211.00100010
........................................................................TTAGTTGCGGTAAGT------------CGACGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................CT-CTGCAG-------------------------------------ACCGACC----GA-------------------------------------------------AA-G.......................................................................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAGA------------TG------CTGGTGCGG.......1911.00100001
.........................................................................................................................GCTAC---CGC---------------------------------------------CGTCGCTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.................................ACAAGAAGTA---GTCCACTGCTGGGACCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
........................................GTA---GTCCACTGCTGGGACCGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
dp5
TGAT-------------------------TGAAGCAAGAA------TTCATAAGCTGGGGCCCAGCATAGCTCTGCTAGCGGTGAGT------------CGACGTGTTCTAATGCCGCGGAA--AAC--ACTGGCTGGACGATGG-CAGAC----------GGCGGGGCGGT---T-GCTCGGTCGGTCGCCCGG----------------CTTAGGCATGA--------AA-ATA----ATTCGAAAGATG------C-----------------------------T---GTCGCC------CGG--------------------------------------------------------------------------------------------C--GG------------------------------------------------------CCCGCCC------------GCCTGTGTTTGTAACTCCACACCCATACACATCATCCCACC----------CATCATTCCAATGCCT-------------------------AAAAACTAAGTGGCG---CG------A------TTTTATGCATAATTCCAGATACTTCATCTCCTGCAACATCCAGCGGCCACAGA------------TGCGGG---GGGAGCGGTGCCTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCATCTCCTGCAACATCCAGC.............................................2715.0050410000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCATCTCCTGCAACATCCAGC.............................................2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCATCTCCTGCAACATCCAGCGG...........................................2811.0010100000000
........................................................................................................................................................................CGGT---T-GCTCGGTCGGTCGCCCGG----------------CTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...................................AAGAA------TTCATAAGCTGGGGCCCAGCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGA------------TGCGGG---GGGAGCGGTGCC...2311.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCCTGCAACATCCAGC.............................................2011.0010100000000
..AT-------------------------TGAAGCAAGAA------TTCATAAGCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACAGA------------TGCGGG---GGGAGC.........2111.0010010000000
..................................................................................................................................CTGGCTGGACGATGG-CAGAC----------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTCCTGCAACATCCAGCGG...........................................2211.0010100000000
................................AGCAAGAA------TTCATAAGCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCATCTCCTGCAACATCC................................................2411.0010100000000
.................................................................................................................................ACTGGCTGGACGATGG-CAGAC----------GGCGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.................................................ATAAGCTGGGGCCCAGCATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCATCTCCTGCAAC....................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGA------------TGCGGG---GGGAGCG........1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCCTGCAACATCCAGCGGC..........................................2211.0010100000000
......................................................CTGGGGCCCAGCATAGCTCTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................................................AAGCTGGGGCCCAGCATAGCTCTGCTAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
droPer2
TGAT-------------------------TGAAGCAAGAA------TTCATAAGCTGGGGCCCAGCATAGCTCTGCTAGCGGTGAGT------------CGACGTGTTCTAATGCCGCGGAA--AACACACTGGCTGGACGATGG-CAGAC----------GGCGGGGCGGT---T-GCTCGCTCGTTCCCCCGG----------------CTTAGGCATGA--------AA-ATA----ATTCGAAAGATG------C-----------------------------T---GTCGCC------CGG--------------------------------------------------------------------------------------------T--GG------------------------------------------------------CCCGCCC------------GCCTGTGTTTGTAACTCCACGCCCATACACAGCATCCCACCACACAGCA--CACCACTCCAATGTCT-------------------------AAAAACTAAGTGGCG---CG------A------TTTTATGCATAATTCCAGATACTTCATCTCCTGCAACATCCAGCGGCCACAGA------------TGCGGG---GGGAGCGGTGCCTATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................ACACTGGCTGGACGATGG-CAGAC----------GG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................GCTCTGCTAGCGGTGAGT------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
......................................................CTGGGGCCCAGCATAGCTCTGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................A-ATA----ATTCGAAAGATG------C-----------------------------T---GTC............................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................................................CAGCATAGCTCTGCTAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droAna3
TGAT-------------------------CGAGGCGAGAA------TCCGAAAGCTCGGACCCTGTGTGGCCCTTGTTGCGGTAAGT------------CGACGTGTTCCGTTTTTGCGATT--TTA------------------------------------------GGCG------AAGTTGAATCAGCAGC----------------C-----------G---C------------------------------------------------------------------------------------------CAGTGGCGGCATGCAGCGGTCATA---------ATTAAAAAATGTAAAAA-----TTGGCATTCAAGACATTGTTTTCTGATCTGC------------------------------------------------------TACGGCTGTCGGGAACTTC------------------------------------CCCCTACACTGCT----------------------TTGCGTTTGC--------TCCTACTACTAAGTCCCT---CT------CTT----CTTTCTGTTCCATCTTAGGTTCTGCAACTCCTTCAGCAGCCATCGACAGTAGA------------TG------CGGGGGCCGTGGCCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................A------TCCGAAAGCTCGGACCCTGTGTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003210000
.................................................GAAAGCTCGGACCCTGTGTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCCATCGACAGTAGA------------TG------C...............2312.002000002
..............................GAGGCGAGAA------TCCGAAAGCTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCCATCGACAGTAGA------------........................2011.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAACTCCTTCAGCAGC.................................................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACAGTAGA------------TG------CGGGGGC.........2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGACAGTAGA------------TG------CGGGGGCCGTG.....2611.001100000
..................................................................................................................................................................................................C----------------C-----------G---C------------------------------------------------------------------------------------------CAGTGGCGGCATGCAGCGGT.................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGTAGA------------TG------CGGGGGCCGTGGCC..2611.001010000
.................................GCGAGAA------TCCGAAAGCTCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTGCAACTCCTTCAGCA...................................................2111.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCAGCCATCGACAGTAGA------------........................2211.001100000
...........................................................ACCCTGTGTGGCCCTTGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................ACCCTGTGTGGCCCTTGTTGCGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
droBip1
TGAT-------------------------CGAGGCGAGAA------TCCAAAAGCTTGGACCCTGTGTGGCCCTGGTTGCGGTAAGT------------CGACGTGTTCCGCTTTTACGATT--TTC------------------------------------------GTCG------AAGATAAATCAGCAGG----------------C-----------G---C------------------------------------------------------------------------------------------CATGAGCGGCATGCGTCGGTCAAAATGAAA------------------AG-----TTTGCGTATAAGACCTTATTTTCTGAT--GT------------------------------------------------------TACGGCTGCCGGGAACTGT----------------------------------------------------------CCATTGCTTGGATTTGTGATAGT--------CTCAACTACTAAGCCGCT---GC------CTC----CTCTTTGTTCTATCTTAGATTCTACAACTCCTTCAGCAGCCATCAAGAATAGA------------TG------CGGGGGCCGTGGCCATSizeHit CountTotal NormTotal
No Reads
droKik1
TGAT-------------------------TGGAGCCAGAA------TCCGAAAGCTCGGGCCCTGCGTGGCCCTTGTTGCGGTGAGT------------CGACGTGTTCCGTTCCGTCC--GGTTC---TCG----------------GTT---TCCGA-----T---A-----------------CTCGGAT---------------------------------------------TCTC-CG----AA-----------------------------------TAAAGTACGGCGGGCGGCTGGTGGTCTGGTG--GCGGGCGGCATGCGACTTTCGGCGTGCGGTTAAGTAAAAA--ATCAACCACGCC-------------------------------GCCC-------------------------------------------------------------CGTACT--------------------------------------------------------------------------------TGTTGTTGTGG----CACACCAAGTCGCG---CTCGCT--T--TATCT-CCACATCTAATTCCAGGTGCTTCAGCTGCTCCATTCGGCAGCGCCAGCAGA------------TG------CGGGAGCCGTTCCCATSizeHit CountTotal NormTotal
No Reads
droFic1
TGAT-------------------------TGGAGCGAGAATCGGAATCGGAAAGCTCGGGCCCTGTGTGGCCCTAGTTGCGGTAAGT------------CGACGTGTTCTGTTCTGTTT--AGTCT---CGTTT----------T-TTTT--------------T---CGGCGGTTTTCCCACCGAATCAGAAC-----------------------------------------------------------------------------GATTAAGCATCC-----------C-------------------------------------------------------------------------------------------------------------GCCCGGCTTT-CTGCCCCATT--------------------------------------------------------ATGCATGGATGTT------------------------------------AGATGCCAAGACCT--------------------------AACATTGCG---CGGTGTT------T------TCTTTTCCCAAATTGCAGATTCTACAGCTCCTGCAGCATACCCAACCGGCCGA------------TT------CCGGAGCCGTTCCCATSizeHit CountTotal NormTotal
No Reads
droEle1
TGAT-------------------------TGGAGCCAGAATCGGAATCGGAAAGCTCGGGCCCTGTATGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGCTCTGTCT--GGTCT---GGTCT-GGTT-----CTCTTC--------------------TC---CCGCCCGCTGAATCATTTGG----------------C-----------GCAG-----------------------------------------------------------------------------------------------------------------------------------------------G-----------------------------------CCGGCTTT-ATGGCCCCTCGGA-------------------------------------GATCGGAACTGG------------------------------------CAC----TG-GCA---------------------CTGGCACTAGC--------A-CTAGCACTAAGTCGCA---CT------G------T-TTCT-TCCACTTCCAGGTTCTGCAGCTCCTCCAGCAGCCCCAGCCGGCTGA------------TT------GCGGAGCCGTGTCCATSizeHit CountTotal NormTotal
No Reads
droRho1
TGAT-------------------------TGGAGCCAGAAACGGAATCGGAAAGCTCGGGCCCTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGTTCTGTCT--GGTCT---GGTTC----------T-CTAC---------------------------TCCCGCTGATTCATTTGG----------------C-----------GTTG---GCAA-AAGAGGC-CG----ATTATGAG----------------------------------------------------------------GCCGT-----------------------------AA--AAGTCGAGC-AG-----------------------------------CCGGCTTT-GAGCCCCATCGCA-------------------------------------GATCGGAACT-----------------------------------------------------------------------------------------------TGCACTAAGTCGCG---CT------GTT----T-TTCT-TGCAACTCCAGGTTCTACAGCTCCTCCAGCAGCCCCAGCCGGCAGA------------TT------GCGGCGCTGTGCCCATSizeHit CountTotal NormTotal
No Reads
droBia1
CGACAC-ACAGAATTGGACC-AGGATGGTGGGAGCGAGAATCGGAATCGGAAAGCTTGGGCCCTGCGCGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGTTCCGTCC--GCTCG---TCTTT----------C-TTCCTACCGCTGCCGCCTGGCCCGGCGAATCCCCCGCCGAATCAGCATG----------------C----------------------------------------------------------------------------T---TTTCCC------------------------CCGA-----------------------------AA--ACGTCACAATTG-----------------------------------CCGGCTTT-TCGGCACCTCCCA-TCGCATCTAACCAT---CCCCACTAACCG---------------------------------------------------------------------------------GAACT----------------------------------------GGT--------G------TCC------TTCTTGCAGATTCTACAGCTCCTCCAGCACCTGCAGCCGGCCGA------------GTCCGC---CGGGGCCGTGCCCATSizeHit CountTotal NormTotal
No Reads
droTak1
CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAT-CGAAATTCCAGATTCTGCAGCTACTCCAGCTGACACAGCCCGCGGA------------AGCCGC---CGGAGCGGTGCCCATSizeHit CountTotal NormTotal
No Reads
droEug1
CTTCCCGTCTGAATCGGAATGACAATGTTTGGAGCGAGAA------TCGGAAAGCTTGGGCCGTGTATGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCTGTTCTGG------------------------------------------------------T---TCTAGCGCTGAATCAGAGGG----------------C-----------G---GCA---A-ACGAAAA-C--------ATGATAGGGGAATGGGGCTGGGGCAAT---------G---GTTTCT------------------------CCGA-----------------------------AA--AAGTCAACCAAG-----------------------------------CCGGCTTTTCTGTTTCATC---GAAGCAGCATATCTG---CTCAACTAACCA--------------------------------------------------------------------------------------------------------------------ATGCA---TGGT---------GT-----TCTTTT-TAAAATTCCAGATTCTACAGATCCTCCAGCAGACACACCCGGCAGA------------AGCCGC---TGGAGCCGTGCCCATSizeHit CountTotal NormTotal
No Reads
dm3
-----------------------------------------------------GCTTGGGCCGTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGTCT--GGTCA---TGTTG----------C-TGGTC----------ACTGGAGTGGC---TCACCCGCTCGATCAGCGGG----------------C-----------G---GGGAA-ACA----------------------GTGGGGAGGGGCCGGCCAGACAGCCCCGGCT---TT----------------------------------------------------------------------------------------------------------------------TTTTTGGCTCCCC---CTA-------ACCAAATAACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCCTAT-GGAATTTACAGATTCTACAGCTACTCCAGTACACACAGCCGGCCGA------------TGCCGC---CGGAGCCGTGCCCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................GTGAGT------------CGACGTGTTCCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000110000000000000000
...........................................................GCCGTGTGTGGCCCTAGTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................CGTGTGTGGCCCTAGTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACAGCTACTCCAGTACA.................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGTTG----------C-TGGTC----------ACTGGAGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........................................................................AGTTGCGGTGAGT------------CGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................A-ACA----------------------GTGGGGAGGGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..............................................................GTGTGTGGCCCTAGTTGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGCTACTCCAGTACAC................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGC---CGGAGCCGTGCCC..1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGTGTGGCCCTAGTTGCGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................A---TGTTG----------C-TGGTC----------ACTGGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................CCTAGTTGCGGTGAGT------------CGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................CGTGTGTGGCCCTAGTTGCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................T------------CGACGTGTTCCGTTCTGTCT--G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GTC----------ACTGGAGTGGC---TCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGTACACACAGCCGGCCG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................GCCGTGTGTGGCCCTAGTTGCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................TGTTG----------C-TGGTC----------ACTGGAGTGGC---TCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GCGGG----------------C-----------G---GGGAA-ACA----------------------GTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTACACACAGCCGGC.......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................G----------C-TGGTC----------ACTGGAGTGGC---TCACCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACAGCTACTCCAGTACACACAGCC..........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CGTTCTGTCT--GGTCA---TGTTG----------C-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................GTGTTCCGTTCTGTCT--GGTCA---TG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................GTTG----------C-TGGTC----------ACTGGAGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........................................................GCCGTGTGTGGCCCTAGTTGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------------TGCCGC---CGGAGCCGTGCC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTGTGTGGCCCTAGTTGCGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTGTTCCGTTCTGTCT--GGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................GAA-ACA----------------------GTGGGGAGGGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................GTGAGT------------CGACGTGTTCCGTTCTGTCT--G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................................TGCGGTGAGT------------CGACGTGTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGA------------TGCCGC---CGGAGCCG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GAGT------------CGACGTGTTCCGTTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACACAGCCGGCCGA------------TGCCGC---CGGAT..........2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GCCGTGTGTGGCCCTAGTTGCGGTGAGT------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGCCGGCCGA------------TGCCGC---CGGA...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACAGCTACTCCAGTACACACAGCC..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTTGCGGTGAGT------------CGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCAGTACACACAGCCGGC.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................TGTTG----------C-TGGTC----------ACTGGAGTGGT---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................GTGTTCCGTTCTGTCT--GGTCA---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GCCCTAGTTGCGGTGAGT------------CGACGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................G----------C-TGGTC----------ACTGGAGTGGC---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGA------------TGCCGC---CGGAGCCGTGC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGTTG----------C-TGGTC----------ACTGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................................................TTCCGTTCTGTCT--GGTCA---TG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................TG----------C-TGGTC----------ACTGGAGTGGC---TCACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TGTTCCGTTCTGTCT--GGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CA----------------------GTGGGGAGGGGCCGGCCAGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA------------TGCCGC---CGGAGCCGT......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GTGTTCCGTTCTGTCT--GGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCCT.....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACACAGCCGGCCGA------------........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................ACGTGTTCCGTTCTGTCT--GGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACT----------------------------------------GAC--------A------TCCTAT-GGAA..............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GTCT--GGTCA---TGTTG----------C-TGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCCGGCCGA------------TGCCGC---CGGAG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GTCT--GGTCA---TGTTG----------C-TGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................GCTCGATCAGCGGG----------------C-----------G---GGGAA-ACA----------------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA------------TGCCGC---CGGAGCCGTGCCCAT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................GTGAGT------------CGACGTGTTCCGTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGTACACACAGCCGGC.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................ACTGGAGTGGC---TCACCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................GTGTTCCGTTCTGTCT--GGATC---..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-----------------------------------------------------GCTTGGGCCGTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGTCT--GGTCA---TGTTGCTGGTC--------------GCTGGTCACTGGAGTGGC---TCACCCGCTCGATCAGCGGG----------------C-----------G---GGGAA-ACC----------------------GCGGGGAGGGGCCGGCCAGACAGCC---------------------------------------------------------------------------------------C-----------------------------------CCGGCTTTTCTGGCTCCCC---CTA-------ACCAAATAACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCCTAT-GGAATTTACAGATTCTACAGCTACTCCAGCACACACAGCCGGCAGA------------TGCCGC---CGGAGCCGTGCCCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................TGGTCACTGGAGTGGC---TC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...........................................................................................................................................C--------------GCTGGTCACTGGAGTGGC---TCACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
...........................................................................................................................TCA---TGTTGCTGGTC--------------GCTGGTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCCT.....................................................................................2511.00100100000000000000
........................................................................................................TGTTCCGTTCTGTCT--GGTCA---TGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...................................................................................................................................TTGCTGGTC--------------GCTGGTCACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
............................................................................................................CCGTTCTGTCT--GGTCA---TAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33101000000000000000
droSec2
-----------------------------------------------------GCTTGGGCCGTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGTCT--GGTCA---TGTTGCTGGTC--------------GCTGGTCACTGGAGTGGC---TCACCCGCTCGATCAGCGGG----------------C-----------G---GGGAA-ACC----------------------GTGGGGAGGGGCCGGCCAGACAGCC---------------------------------------------------------------------------------------------------------------------------CCGGCTTTTCTGGCTCCCC---CTA-------ACCAAATAACTAACTAACCA-------------------------------------------------------------------------------GAGAACT----------------------------------------GAC--------A------TCCTAT-GGAATTTACAGATTCTACAGCTACTCCAGCACACACAGCCGGCAGA------------TGCCGC---CGGAGCCGTGCCCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................CGTGTGTGGCCCTAGTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTACTCCAGCACACACAGCCGGC.......................................2711.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACAGCCGGCAGA------------TGCCGC---C..............2311.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA------------TGCCGC---CGGAGCCGT......1911.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACAGCCGGCAGA------------TGCCGC---CG.............2411.0010010
...........................................................................................................................................C--------------GCTGGTCACTGGAGTGGC---TCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACAGCCGGCAGA------------TGC.....................1911.0010010
...........................................................................................................................................C--------------GCTGGTCACTGGAGTGGC---T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
droYak3
ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAT-GGAATTCGCAGATTCTACAGCTACTCCAGCACACACAGCCGGCTGA------------TGGCGC---CGGAGCCGTACCCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACAGCTACTCCAGCACACACA.............................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTACAGCTACTCCAGCA...................................................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGA------------TGGCGC---CGGAGCCGT......2111.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTACTCCAGCACACACAGCC..........................................2511.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACAGCCGGCTGA------------T.......................1811.00101000000000
droEre2
-----------------------------------------------------GCTTGGGCCCTGTGTGGCCCTAGTTGCGGTGAGT------------CGACGTGTTCCGTTCTGCCT--GGTCA---TGTTT----------C-TTGTC----------ACTGGAGTGGC---G-GCCCGCTCGATCAGCGGA----------------C-----------G---GGGGA-ACA----------------------TTGGGGAGGGGCCGGTCAGACAGCC---------------------------------------------------------------------------------------------------------------------------CCGGCTTTTCTGGCTACC----CTA-------ACCAAAAAACTAACTAACCA---------------------------------------------------------------------------------GAACT----------------------------------------GAC--------A------TCTTAT-GGAATTTACAGATTCTACAGCTACTCCAGCACACACAGCCGGCTGA------------TGCCGC---CGGAGCCGTGCCCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................GA-ACA----------------------TTGGGGAGGGGCCGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTACAGCTACTCCAGCACACA...............................................2411.0011000000

Generated: 05/17/2015 at 05:10 AM