ID:

dvi_10192

 Coordinate:

scaffold_12963:2487319-2487469 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.3 -27.2 -27.2

Flybase annnotation

exon [dvir_GLEANR_1539:2]; CDS [Dvir\GJ15088-cds]; intron [Dvir\GJ15088-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGTTTTTGTTGTTTGGCATTTATTTTTAATTAAACAACAGTTGGCACTGCTGCTGATAAGCTGCAGCCGCATTGCAGCCTACATTGCATCAAATGAATTTTTATATAACTCTGTTATTTTTAGCACTCATTTTCGGCCAGCCATGTCATGCCAAAACTGTGACGTCATGAATTTGTTTTGTGTTTCTTGTTTTGTTTACAGATGATTTCAACGAAATTTTATGCCGGCCACGATGAGCATTTCTATTTGGA
**************************************************.(((((((.((((..((((...(((((......)))))..((((((........(((((...))))).........)))))).))))))))..))))).))((((((...((...((((((.....))))))..))..)))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M047
female body
 SRR060679
140x9_testes_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060670
9_testes_total
 SRR060659
Argentina_testes_total
 SRR1106720
embryo_8-10h
 SRR060687
9_0-2h_embryos_total
 SRR060665
9_females_carcasses_total
 SRR060666
160_males_carcasses_total
 SRR060664
9_males_carcasses_total
 SRR060667
160_females_carcasses_total
 SRR060669
160x9_females_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060663
160_0-2h_embryos_total
 SRR060672
9x160_females_carcasses_total
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 M061
embryo
 SRR060668
160x9_males_carcasses_total
 SRR060681
Argx9_testes_total
 V053
head
 SRR060675
140x9_ovaries_total
 SRR060680
 9xArg_testes_total
 SRR1106729
mixed whole adult body
 V047
embryo
.......................................................................................................................................................................................................................ATTTTATGCAGGCCACCAT................. 19 2 8 10.63 85 16 6 14 10 0 0 0 7 6 6 4 4 4 2 0 2 1 0 0 1 1 1 0 0 0 0
........................................................................................................................................................................................................................TTTTATGCAGGCCACCAT................. 18 2 18 1.78 32 3 3 12 6 0 0 0 0 0 0 1 1 0 1 1 0 2 0 0 0 0 0 2 0 0 0
.......................................................................................................................................................................................................................ATTTTATGCCGGCCACGAT................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTTATGCCGGCCACGATGAGCA............ 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................ATTTTCGGCCAGCCATGTCATGC.................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATTTTATGCCGGCCACGATGAGCA............ 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAACGAAATTTTATGCCGGC....................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................GAAATTTTATGCCGGCCACGATGAG.............. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTTATGCCGGCCACGATGAG.............. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CACGATGAGCATTTCTATTT... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATTTTATGCCGGCCACGATGAGCATTTCT....... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AATTTTATGCAGGCCACCAT................. 20 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATTTTATGCCGGCCACCATC................ 21 3 5 0.40 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTTTATGCCGGCCACCATC................ 19 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTTACCGATGATTACAAC....................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................TTACCGATGATTACAAC....................................... 17 2 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0
.....................................................................................................................................................................................................AAAGATGATTTCAACGAAAAG................................. 21 3 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATTTTATGCGGGCCACCAT................. 20 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATTTTATGCCTGCCACCAT................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACAAAAACAACAAACCGTAAATAAAAATTAATTTGTTGTCAACCGTGACGACGACTATTCGACGTCGGCGTAACGTCGGATGTAACGTAGTTTACTTAAAAATATATTGAGACAATAAAAATCGTGAGTAAAAGCCGGTCGGTACAGTACGGTTTTGACACTGCAGTACTTAAACAAAACACAAAGAACAAAACAAATGTCTACTAAAGTTGCTTTAAAATACGGCCGGTGCTACTCGTAAAGATAAACCT
**************************************************.(((((((.((((..((((...(((((......)))))..((((((........(((((...))))).........)))))).))))))))..))))).))((((((...((...((((((.....))))))..))..)))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060679
140x9_testes_total
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060687
9_0-2h_embryos_total
 SRR060684
140x9_0-2h_embryos_total
 SRR060678
9x140_testes_total
 SRR060682
9x140_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060686
Argx9_0-2h_embryos_total
..............................................................................................................................................................................................................................CGGCCGGTGCTACTCGTAAAGA....... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
....................................................................................................................................................ACGGTTTTGACACTGCAGTACTT................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................CCGGTCGGTACAGTACGGTT................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................AAAAAATATTGAGTCAATAAAAG.................................................................................................................................. 23 3 8 0.38 3 0 0 0 1 1 0 1 0 0
..................................................................................................AAAAAATATTGAGTCAATAAA.................................................................................................................................... 21 2 3 0.33 1 0 0 0 0 0 1 0 0 0
................................................................TCGGCTCAACGTCGGATGTTA...................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................ACACTACGGCCGGTGCTA................. 18 2 5 0.20 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................AAAAAAACAAATGCCTACTAA............................................ 21 2 5 0.20 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................AAAAACAAATGCCTACTAA............................................ 19 2 13 0.15 2 0 0 0 0 2 0 0 0 0
...........................................................................................................................................................................................AAAAAACAAATGCCTACTAA............................................ 20 2 7 0.14 1 0 0 0 0 0 0 1 0 0
..................................CTTGTCAACCGCGACGACGAC.................................................................................................................................................................................................... 21 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AAAACCAATGCCTACTAA............................................ 18 2 9 0.11 1 0 0 0 1 0 0 0 0 0
...................................................................................................AAAAATATTGAGTCAATAA..................................................................................................................................... 19 2 11 0.09 1 0 0 0 0 0 0 0 0 1
..........................................................................................................................................................................................AAAAAAACCAATGCCTACTAA............................................ 21 3 14 0.07 1 0 0 0 0 0 1 0 0 0
.......................................................................................................GTATTGAGACAATAAAAG.................................................................................................................................. 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:2487269-2487519 + dvi_10192 TGT---TTTTGTTGTTTGGCATTT--ATTTTTAATTAAACA---ACAG----TTG-------------------------------------------------------GCACTGCTGCTGATAAGCTGCAGCCGCATTGCAGCCTACAT-------------TGCATCAAATGAATTTTTATATAAC--------------------TCTGTTATTTTTAGCACTC----------ATTTTCGGCCAGC--CATGT-CATGCCAAAACTGTGACGTCATGA------------AT-----T-------------------------------------------------TGTTTTGTGT-----------T----------------------------T-------------------------------------------------------CTTG--TTT-TGTTTACAGATGATTTCAACGAAATTTTATGCCGGCCACGATGAGCATTTCTATT---------------TGGA
droMoj3 scaffold_6500:12653251-12653413 + TTT---ATG-------TAATTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATTTATAGCATTTTTGGTATTTGGCTTTTGGCCAG----------------------TGACATCACATGGTTACTCATAAACTTGTTT-------------------------------------------------TGTTTTGTGT------------------------------------------------------------------------------------------------TGTTCTTTTCGACTTACAGATGATTTCAACGAAATTCTATGCCGGCCACGATGAGCGTTTCTATT---------------TGGA
droGri2 scaffold_15252:2096928-2097309 + TGT---TTTTGTTCTTTAGCACATATATATTTAATTAAATGAGGACAG----CTG-------------------------------------------------------GCAACGCTGATAAGAAACTGCAATGGCA-----GCATATTTTTTTGTTTATGTA---------------------------------------------------------AGCACTTGTTGTATTGA----------A---CGCAGCCCATGCCAAAGCGATGACGTCAC---------------------TACTTACCATAATTTTGATCAAGTTTGGCATTTTTAAAAATGTTTATTATTGTTTTAGAGGCAGCTATTGTCATAAACTACTAATATTCTCATACAAATAGTTTGCTATAAATATAATTAACGAATTTAGATTTACATTAATTAAAGATTATTTGTTATGT-TTT-TGCTTGCAGATGATTTCAACGAAACTCTATGCCGGCTACGATGAGCGTTACAATTTCTATCTATATTGTGTGAA
droWil2 scf2_1100000004521:6740152-6740361 + CAT---TTTTAT-----------------TTTAATTAAAAATAAACAAACAATTGTTGAAAGCTTCTTTCTTGCAAGTTTATATAATGACTCATTTAGATGCCCGAATTTGCATTGCT--------------------------------------------------------------------------------------------------------------------------------------TACAAA-AAAATGTGTTCTCTGACGTCATGC------------------------------------------------------------------------------GTTTATTTATATA----------------------------T-------------------------------------------------------TTTGTTATT-TGTTTACAGATGATTTCAACGAAATTCTATGCTGGCCATGATGAACGTTTCTATT---------------TGGA
dp5 4_group1:742983-743212 - TAT---GTT-------TAGAACAT---TATTTACTTACACAGGGCCAAG----TT-------------------------------------------------------TC-------------------AG-------------------------TATGTGCGC--------ATTACTTATATAACCTTACCTATACGATATATGATATGTTATTTATAGC-----TTGTCGTGC----------A---CGCTGA-CATGCCTATTTAGTGACGTCA---------------------TT-------------------------------------------------TGTTGTGGGGCTTACTCATCCC----------------------------G-------------------------------------------------------TGTGCTGTT-TGTTTATAGATGATTTCTACCAAGTTTTATGCCGGCCACGATGAGAAGATTTATC---------------TGGA
droPer2 scaffold_5:4467674-4467903 + TAT---GTT-------TAGAACAT---TATTTACTTACACAGGGCCAAG----TT-------------------------------------------------------TC-------------------AG-------------------------TATGTGCGC--------ATTACTTATATAACCTTACCTATACGATATATGATATGTTATTTATAGC-----TTGTCGTGC----------A---CGCTGA-CATGCCTATGTAGTGACGTCA---------------------TT-------------------------------------------------TGTTGTGGGGCTTACTCATCCC----------------------------G-------------------------------------------------------TGTGCTGTT-TGTTTATAGATGATTTCTACCAAGTTTTATGCCGGCCACGATGAGAAGATTTATC---------------TGGA
droAna3 scaffold_13258:273237-273296 - TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCAGATGATTTCCACAAAGTTTTATATTGGCCACGATGAGCGTTTTTATC---------------TAGA
droBip1 scf7180000393981:14804-14866 - TGT---G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTCAGATGATTTCAACCAAGTTTTATATTGGCCACGATGAGCGTTTTTTTT---------------TAGA
droKik1 scf7180000302644:65902-66005 - TTATGGTTTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTTGGTA--------------------------------------AA-----A-------------------------------------------------TGTTTCATAC-----------G----------------------------T-------------------------------------------------------TTAT--TTG-ATTTCGCAGATGATTTCTACAAAGTTTTATGCTGGCCACGATGAACAGTTCTATA---------------TGGA
droFic1 scf7180000454176:23774-23858 - ATT---T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTAGTCAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCATT-TGCTTGCAGATGGTTTCCACAAAGTTCTATGCCGGCCATGATGAACGATTTTATT---------------TAGA
droEle1 scf7180000491284:18499-18555 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGATGATTTCCACTAAATTCTATGTCGGTCATGACGAACGGTTTTATC---------------TGGA
droRho1 scf7180000772209:7391-7452 - TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTCAGATGGTTTCCACAAAGTTTTATGCCGGCCATGACGAACGGTTCTATT---------------TGGA
droBia1 scf7180000301260:15142-15200 + TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCAGATGATTTCGACTAAGTTTTATGCAGGCCATGATGAACGCTTTTATT---------------TGGA
droTak1 scf7180000415483:14863-14918 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGATGATTTCCACCAAGTTCTATGTAGGCCATGACGAACGGTTCTATT---------------TGGA
droEug1 scf7180000409667:82863-82921 - TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAGATGATTTCTACAAAGTTCTATGCAGGCCATGACGAACGGTTTTACC---------------TTGA
dm3 chr2RHet:391792-391853 + TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTACAGATGATTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATC---------------TGGA
droSim2 2r:1473250-1473306 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGATTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATC---------------TGGA
droSec2 scaffold_165:52544-52600 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGATTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATC---------------TGGA
droYak3 v2_chrUn_6728:142789-142845 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATGATCTCCACAAAATTCTATGCGGGCCATGACGAACGGTTCTATC---------------TGGA
droEre2 scaffold_4929:24717863-24717919 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGATTTCCACAAAATTCTATGCGGGCCATGACGAACGGTTCTATC---------------TTGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
TGT---TTTTGTTGTTTGGCATTT--ATTTTTAATTAAACA---ACAG----TTG-------------------------------------------------------GCACTGCTGCTGATAAGCTGCAGCCGCATTGCAGCCTACAT-------------TGCATCAAATGAATTTTTATATAAC--------------------TCTGTTATTTTTAGCACTC----------ATTTTCGGCCAGC--CATGT-CATGCCAAAACTGTGACGTCATGA------------AT-----T-------------------------------------------------TGTTTTGTGT-----------T----------------------------T-------------------------------------------------------CTTG--TTT-TGTTTACAGATGATTTCAACGAAATTTTATGCCGGCCACGATGAGCATTTCTATT---------------TGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTATGCCGGCCACGAT................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGCCGGCCACGATGAGCA...........................2311.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................ATTTTCGGCCAGC--CATGT-CATGC......................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTATGCCGGCCACGATGAGCA...........................2411.001000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAAATTTTATGCCGGC......................................2011.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTTTATGCCGGCCACGATGAG.............................2511.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGCCGGCCACGATGAG.............................2111.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGATGAGCATTTCTATT---------------T...2011.001000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTATGCCGGCCACGATGAGCATTTCT......................2911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTT---ATG-------TAATTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATTTATAGCATTTTTGGTATTTGGCTTTTGGCCAG----------------------TGACATCACATGGTTACTCATAAACTTGTTT-------------------------------------------------TGTTTTGTGT------------------------------------------------------------------------------------------------TGTTCTTTTCGACTTACAGATGATTTCAACGAAATTCTATGCCGGCCACGATGAGCGTTTCTATT---------------TGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGCCGGCCACGATGAGC............................2014.004300001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTATGCCGGCCACGATGAGC............................2212.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACGAAATTCTATGCCGG.......................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTCTATGCCGGCCACGATGAGC............................2611.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTATGCCGGCCACGAT................................1911.001100000
droGri2
TGT---TTTTGTTCTTTAGCACATATATATTTAATTAAATGAGGACAG----CTG-------------------------------------------------------GCAACGCTGATAAGAAACTGCAATGGCA-----GCATATTTTTTTGTTTATGTA---------------------------------------------------------AGCACTTGTTGTATTGA----------A---CGCAGCCCATGCCAAAGCGATGACGTCAC---------------------TACTTACCATAATTTTGATCAAGTTTGGCATTTTTAAAAATGTTTATTATTGTTTTAGAGGCAGCTATTGTCATAAACTACTAATATTCTCATACAAATAGTTTGCTATAAATATAATTAACGAATTTAGATTTACATTAATTAAAGATTATTTGTTATGT-TTT-TGCTTGCAGATGATTTCAACGAAACTCTATGCCGGCTACGATGAGCGTTACAATTTCTATCTATATTGTGTGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCGTTACAATTTCTATC.............2111.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGCTACGATGAGCGTTA........................2011.00101
droWil2
CAT---TTTTAT-----------------TTTAATTAAAAATAAACAAACAATTGTTGAAAGCTTCTTTCTTGCAAGTTTATATAATGACTCATTTAGATGCCCGAATTTGCATTGCT--------------------------------------------------------------------------------------------------------------------------------------TACAAA-AAAATGTGTTCTCTGACGTCATGC------------------------------------------------------------------------------GTTTATTTATATA----------------------------T-------------------------------------------------------TTTGTTATT-TGTTTACAGATGATTTCAACGAAATTCTATGCTGGCCATGATGAACGTTTCTATT---------------TGGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAAATTCTATGCTGGCCATGA.................................2511.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGCTGGCCATGATGAACGT..........................2311.00100100
...............................................................................................................................................................................................................................................................AAA-AAAATGTGTTCTCTGAC..........................................................................................................................................................................................................................................................................2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTCTATGCTGGCCATG..................................2011.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACGAAATTCTATGCT.........................................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTATGCTGGCCATGATGAAC............................2311.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAAATTCTATGCTGGC......................................1911.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGAAATTCTATGCTGGCCAT...................................2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTGGCCATGATGAACGTT.........................2111.00100010
dp5
TAT---GTT-------TAGAACAT---TATTTACTTACACAGGGCCAAG----TT-------------------------------------------------------TC-------------------AG-------------------------TATGTGCGC--------ATTACTTATATAACCTTACCTATACGATATATGATATGTTATTTATAGC-----TTGTCGTGC----------A---CGCTGA-CATGCCTATTTAGTGACGTCA---------------------TT-------------------------------------------------TGTTGTGGGGCTTACTCATCCC----------------------------G-------------------------------------------------------TGTGCTGTT-TGTTTATAGATGATTTCTACCAAGTTTTATGCCGGCCACGATGAGAAGATTTATC---------------TGGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTATGCCGGCCACGATGA..............................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTTATGCCGGCCACGATGAGA............................2411.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGCCGGCCACGATG...............................1911.0010100000000
.....................................................................................................................................................................................................................................TTGTCGTGC----------A---CGCTGA-CATG.......................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTATGCCGGCCACGA.................................1811.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATGAGAAGATTTATC---------------TG..2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACCAAGTTTTATGCCGGC......................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCCGGCCACGATGAGAA...........................2011.0010100000000
...................................................................................................................................................................................................................................................................CATGCCTATTTAGTGACGTCA---------------------.................................................................................................................................................................................................................................................2111.0010000001000
........................................................................................................................................................................................................................................TCGTGC----------A---CGCTGA-CATGCCTA...................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
TAT---GTT-------TAGAACAT---TATTTACTTACACAGGGCCAAG----TT-------------------------------------------------------TC-------------------AG-------------------------TATGTGCGC--------ATTACTTATATAACCTTACCTATACGATATATGATATGTTATTTATAGC-----TTGTCGTGC----------A---CGCTGA-CATGCCTATGTAGTGACGTCA---------------------TT-------------------------------------------------TGTTGTGGGGCTTACTCATCCC----------------------------G-------------------------------------------------------TGTGCTGTT-TGTTTATAGATGATTTCTACCAAGTTTTATGCCGGCCACGATGAGAAGATTTATC---------------TGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................ATAGC-----TTGTCGTGC----------A---CGC...............................................................................................................................................................................................................................................................................................1813.003300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTTTATGCCGGCCACGATGA..............................2311.001001000
................................................................................................................................................................TGTGCGC--------ATTACTTATATAACCTTA.............................................................................................................................................................................................................................................................................................................................................................2511.001010000
............................................................................................................................................................................................................................................GC----------A---CGCTGA-CATGCCTATGT................................................................................................................................................................................................................................................................................2011.001010000
....................................................................................................................................................................................................................................................................................GTCA---------------------TT-------------------------------------------------TGTTGTGGGGCTTA................................................................................................................................................................................2011.001000001
................................................................................................................................................................................................................................................................GA-CATGCCTATGTAGTGACGTCA---------------------.................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................................................CA---------------------TT-------------------------------------------------TGTTGTGGGGCTTACTC.............................................................................................................................................................................2111.001010000
droAna3
TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTCAGATGATTTCCACAAAGTTTTATATTGGCCACGATGAGCGTTTTTATC---------------TAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATATTGGCCACGATGAGC............................2111.001001000
droBip1
TGT---G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTCAGATGATTTCAACCAAGTTTTATATTGGCCACGATGAGCGTTTTTTTT---------------TAGASizeHit CountTotal NormTotal
No Reads
droKik1
TTATGGTTTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTTGGTA--------------------------------------AA-----A-------------------------------------------------TGTTTCATAC-----------G----------------------------T-------------------------------------------------------TTAT--TTG-ATTTCGCAGATGATTTCTACAAAGTTTTATGCTGGCCACGATGAACAGTTCTATA---------------TGGASizeHit CountTotal NormTotal
No Reads
droFic1
ATT---T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTAGTCAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCATT-TGCTTGCAGATGGTTTCCACAAAGTTCTATGCCGGCCATGATGAACGATTTTATT---------------TAGASizeHit CountTotal NormTotal
No Reads
droEle1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGATGATTTCCACTAAATTCTATGTCGGTCATGACGAACGGTTTTATC---------------TGGASizeHit CountTotal NormTotal
No Reads
droRho1
TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTTTCAGATGGTTTCCACAAAGTTTTATGCCGGCCATGACGAACGGTTCTATT---------------TGGASizeHit CountTotal NormTotal
No Reads
droBia1
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCCAGATGATTTCGACTAAGTTTTATGCAGGCCATGATGAACGCTTTTATT---------------TGGASizeHit CountTotal NormTotal
No Reads
droTak1
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGATGATTTCCACCAAGTTCTATGTAGGCCATGACGAACGGTTCTATT---------------TGGASizeHit CountTotal NormTotal
No Reads
droEug1
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACAGATGATTTCTACAAAGTTCTATGCAGGCCATGACGAACGGTTTTACC---------------TTGASizeHit CountTotal NormTotal
No Reads
dm3
TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTACAGATGATTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATC---------------TGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGCGGGCCACGACGAACGGTTC.......................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000102020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACGCGGGCCACGACGAACGGT.........................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGCGGGCCACGACGAACGGTT........................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCGGGCCACGACGAACGG..........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCGGGCCACGACGAAC............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCCACGACGAACGGTTCT......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGCGGGCCACGACGAAC............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACGCGGGCCACGACGAACGG..........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATTCTACGCGGGCCACGA.................................2212.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGGGCCACGACGAACGG..........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACGCGGGCCACGACG...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACGCGGGCCACGACGAACGGTTC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACGACGAACGGTTCT......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTACGCGGGCCACGACGA..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCACAAAATTCTACGCGGGCCA....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAAATTCTACGCGGGCCA....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTACGCGGGCCACGACG...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCGGGCCACGACGAACGGTTCTATC---------------....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCCACGACGAACGGTT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGCGGGCCACGACGAACGG..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCCACAAAATTCTACGCG.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCGGGCCACGACGAACGGTTC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGCCACGACGAACGGTTCC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACGCGGGCCACGACGAACGGTTCT......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTCCACAAAATTCTACGCGGG.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTACGCGGGCCACGACGAACGGT.........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCGGGCCACGACGAACGG..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTCCACAAAATTCTACGCGG........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACGCGGGCCACGACGAA.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTACGCGGGCCACGACGA..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCGGGCCACGACGAACGGTTC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCCACAAAATTCTACGCGGGC......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCACAAAATTCTACGCGGGCCA....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACAAAATTCTACGCGGGCCACGACGAA.............................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGATTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATC---------------TGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTACGCGGGCCACGACGAACGGTT........................2611.00100000000000010000
droSec2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGATTTCCACAAAATTCTACGCGGGCCACGACGAACGGTTCTATC---------------TGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCCACAAAATTCTACGCGGGC......................................2511.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCGGGCCACGACGAAC............................2011.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACGAACGGTTCTATC---------------TGGA2311.0010010
droYak3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACAGATGATCTCCACAAAATTCTATGCGGGCCATGACGAACGGTTCTATC---------------TGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGCGGGCCATGACGAACG...........................2211.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGCGGGCCATGACGAACGGTT........................2411.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGGGCCATGACGAAC............................1811.00101000000000
droEre2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGATTTCCACAAAATTCTATGCGGGCCATGACGAACGGTTCTATC---------------TTGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTATGCGGGCCATGACGAAC............................2313.0030000210
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTATGCGGGCCATGACGAAC............................2413.0030100200
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGCGGGCCATGACGAACGGTT........................2512.0020100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGCGGGCCATGACGAACGGTT........................2412.0020100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGCGGGCCATGACGAACGGT.........................2411.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACAAAATTCTATGCGGGCCATGA.................................2611.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTATGCGGGCCATGACGAACG...........................2411.0010000010

Generated: 05/16/2015 at 08:04 PM