ID:

dvi_10079

 Coordinate:

scaffold_12963:1924473-1924612 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dvir_GLEANR_1504:1]; CDS [Dvir\GJ14807-cds]; CDS [Dvir\GJ14807-cds]; exon [dvir_GLEANR_1504:2]; intron [Dvir\GJ14807-in]

No Repeatable elements found

Sense Strand Reads

--------------------------------##################--------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTAATTAATAGCCGCTCTATACAACTGTCATAATGCGACGTCCCAAGAAGGTGAGTTGCACTTTAAATACTAACACGCAATTTGATGCGAAGTTGTGAGGTTAAATTTCATACACTAACCAAATGAACGGTATATTGAATTTCTTAGCATATTTGCTATGTCCTTTTAACTCTCATGATTTTCTTTGCAGTACGAGGCTGGCGAAGCCACACAGTATATAAGTCGACGTGCTGCGCTGCG
**************************************************..(((((((.................)))))))..((((((((((((((((((((...((((.....(((........)))...............(((....)))))))....)))))).)))))))....))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR060663
160_0-2h_embryos_total
 M047
female body
 SRR060682
9x140_0-2h_embryos_total
 V116
male body		 SRR060684
140x9_0-2h_embryos_total
 M061
embryo
 SRR060686
Argx9_0-2h_embryos_total
 M027
male body		 SRR060666
160_males_carcasses_total
 SRR060662
9x160_0-2h_embryos_total
 SRR1106729
mixed whole adult body
 SRR060661
160x9_0-2h_embryos_total
 V047
embryo
 GSM1528803
follicle cells		 M028
head
 SRR060685
9xArg_0-2h_embryos_total
 V053
head
 SRR060654
160x9_ovaries_total
 SRR060664
9_males_carcasses_total
 SRR060665
9_females_carcasses_total
 SRR060675
140x9_ovaries_total
 SRR060678
9x140_testes_total
 SRR060658
140_ovaries_total
 SRR060689
160x9_testes_total
 SRR060672
9x160_females_carcasses_total
 SRR060659
Argentina_testes_total
 SRR060681
Argx9_testes_total
 SRR060687
9_0-2h_embryos_total
 SRR060657
140_testes_total
 SRR060669
160x9_females_carcasses_total
 SRR1106728
larvae
 SRR060668
160x9_males_carcasses_total
 SRR060671
9x160_males_carcasses_total
 SRR060677
Argx9_ovaries_total
 SRR060679
140x9_testes_total
......................................................................................GCGAAGTCGTGAGGCTAAG....................................................................................................................................... 19 3 13 42.62 554 180 1 50 71 44 0 33 29 3 37 10 35 16 0 4 4 3 0 0 0 0 0 9 8 0 3 2 3 2 2 2 1 1 0 1
.....................................................................................TGCGAAGTCGTGAGGCTAAG....................................................................................................................................... 20 3 4 7.50 30 5 0 8 3 9 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................GCGAAGTCGTGAGGCTAA........................................................................................................................................ 18 2 4 4.00 16 1 0 7 0 5 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATACAACTGTCATAATGCGA.......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GAAGTACGAGGCTGGCGAAGC................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATACAACTGTCATAATGCGACGT....................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GTCGACGTGCTGCGCTGC. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGCTCTATACAACTGTCATAAT.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CAACTGAACGGTAGATTGA...................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AATGCGACGTCCCAAGAAGGT............................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AGTACGAGGCTGGCGAAGCCACACAGT......................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AGTATATAAGTCGACGTGCTGCGCT... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ATAGCCGCTCTATACAACTG..................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACAGTATATAAGTAGACGTG.......... 20 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..AATTAATAGCCGCTCTATACAACTGTC................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AGCCGCTCTATACAACTGTC................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ATAGCCGCTCTATACAACT...................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCGAAGTTGTGAGGCTAAGCT..................................................................................................................................... 21 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACGAGGCTGGCGAAGCCACACA........................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATATAAGTCGACGTGCTGCGCTGC. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTATATAAGTCGACGTGCTG....... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................CGACGTCCCAAGAAGGTGAGT........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGCTCTATACAACTGTCATAATGCGACGT....................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AGTCGACGTGCTGCGCTGC. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AAGAAGTACGAGGCTGGCGAAGCCACAC............................ 28 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TGGCGAAGCCACACAGTATATAAGTCA............... 27 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GTACGAGGCTGGCGAAGCCACACAGT......................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AAGAAGTACGAGGCTGGCGAAGCC................................ 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........AGCCGCTCTATACAACTGTCA.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................AACTGTCATAATGCGACG........................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..................ATACAACTGTCATAATGCG........................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACGAGGCTGGCGAAGCCACACA........................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGCCACACAGTATATAAGTCGAC............. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CGAGGCTGGCGAAGCCACAC............................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CATAATGAGGCGTCCCAAGAAG.............................................................................................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...ATTAATAGCCGCTCTATACAACTG..................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................TGTCATAATGCGACGTCCC.................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................ATAATGCGACGTCCCAAGA................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............CGCTCTATACAACTGTCATAATG............................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................AATGCGACGTCCCAAGAAGGTGAGTTG...................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGCTACACAGTATATAAGTCGAC............. 23 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.................TATACAACTGTCATAATGCG........................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTATATAAGTAGACGTGCTGC...... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................CTATACAACTGTCATAATGAGGC......................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................CATAATGAGGCGTCCCCAGAAG.............................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGAAGTCGACGTGCTGCGCTGC. 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......AATAGCCGCTCTATACAACTGTCATAAT.............................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GCCACACAGTATATAAGTCGACGTGCT........ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CGCGAAGTCGTGAGGCTAA........................................................................................................................................ 19 3 13 0.92 12 1 1 2 0 1 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0
.....................................................................................TGCGAAGTCGTGAGGCTAA........................................................................................................................................ 19 2 3 0.67 2 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................GTTGCGAAGTCGTGAGGCTAA........................................................................................................................................ 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACGACGCTGGCGAAGCCA............................... 18 1 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AGTCGACGTTCTGCGCTGC. 19 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................CAATTGAACGGTAGATTGAA..................................................................................................... 20 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......ATAGCCGCTCGAGACAAC....................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CGAAGTCGTGAGGCTAAAC...................................................................................................................................... 19 3 19 0.11 2 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCGAAGTCGTGAGGTTACG....................................................................................................................................... 19 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................GTCGCGAAGTTGTGAGGCT.......................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

GATTAATTATCGGCGAGATATGTTGACAGTATTACGCTGCAGGGTTCTTCCACTCAACGTGAAATTTATGATTGTGCGTTAAACTACGCTTCAACACTCCAATTTAAAGTATGTGATTGGTTTACTTGCCATATAACTTAAAGAATCGTATAAACGATACAGGAAAATTGAGAGTACTAAAAGAAACGTCATGCTCCGACCGCTTCGGTGTGTCATATATTCAGCTGCACGACGCGACGC
**************************************************..(((((((.................)))))))..((((((((((((((((((((...((((.....(((........)))...............(((....)))))))....)))))).)))))))....))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M027
male body		 SRR060669
160x9_females_carcasses_total
 SRR060672
9x160_females_carcasses_total
 V116
male body		 SRR060666
160_males_carcasses_total
 M061
embryo
.....................................................................................................................................TGGCTTAAAGAATCGTATAGA...................................................................................... 21 3 6 0.33 2 0 1 1 0 0 0
.........TCTGCGAGATAGGTTGAC..................................................................................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0 0 0
.......................................................................................................................................GCTTAAAGAATCGTATAGA...................................................................................... 19 2 8 0.13 1 0 0 0 0 1 0
.............GGAGCTAAGTTGACAGTATT............................................................................................................................................................................................................... 20 3 9 0.11 1 0 0 0 1 0 0
............................GCATTACGCTTCAGGGTG.................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 1
..........................................................................TGCTTTCACCTACGCTTCA................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droVir3 scaffold_12963:1924423-1924662 + dvi_10079 CTAATTA--ATAGCCGCTCTATACAACTGTCATAATGCGACGTCCCAAGAAGGTGAGTTGCACTTTA---AATA-CTA------ACACGCAATTTGA--TGCGAAGTTG-------TG----------AGGTTAAA-TTTCATACA-----------------------------------CTAACCAAAT-----GAACGGTATATTGAATTTCTTAGC--ATATTTGCTATGTCCTTTTAACTCTCATG----AT----TTTCTTT-GCAGTACGAGGCTGGCGAAGCCACACAGTATATAAGTCGACGTGCTGCGCTGCG
droMoj3 scaffold_6500:28912284-28912497 + ATATCTAA--CTGCTGCACTGCAAGACTTTCACAATGAGGCGTCCCAAGAAGGTATGTTAACATATT---AACC-AAA------AGACGCAATTAGT--TGCG--ATTG-------CG----------AGGTTATT-TTTTA----ACCGG--------AATATGCATAGACTCTGAGTTTTCCACAA------------------TTTA---AAT------TG-------------------------------ATT----TTATTT-GCAGTACGAAGCCGGTGAGGCCACACAATATATAAGCCGGCGCGCAGCACTGCG
droGri2 scaffold_14978:395625-395842 - CTAATAAA--TAGCTGCTCTAACAGACCGCCACAATGAGACGTCCCAAGAAGGTATGTTTCAAGTAA---AATA-GTA------ACACGCAATTCAC--AGCAAAACTG-------TG----------AGGTTATT-TTCAATACA-CT-------------------------------ACACAATAAAG------CAAAGCACAGCCATTTTATCAAT--CT-------------------------------GTTTG-TCACTTC-ACAGTACGAGTCCGGCGAGGCCACACAGTACATTAGCCGGCGTGCGGCGCTGCG
droWil2 scf2_1100000004909:3513588-3513744 - CCTAGACA---CAGAC----TACCTTCCAACACAATGAGACGTCCTAAGAAGGTGGGTGACA-------------------------CGA--------------------------------------------------ATTTAA-------------A-------------------ACTAAAAAATAT-----------CACACAGA---TTCTC-----T-------------------------------AATCA-ATCATCC-ACAGTACGAGTCAGGTGAGGCCACTCAGTATATCAGCCGTCGTGCTGCCTTGCG
dp5 4_group3:458012-458198 + TTTGCCA---------------ACAAT--CCACAATGAGACGTCCGAAGAAGGTAAGTGGAAGATCA--ATCGCAC-------------CATTT-CAGACACC--GCTG-------TG----------AGGTTATG-TGGTTGGAG-------------C-------------------ACCT--TCATCC-----------AGCATGTA---AATAACT--CG-------------------------------ATCTT-GTCCTAC-GCAGTACGAAGCCGGAGAGGCCACCCAGTACATCAGTCGTCGGGCGGCGATTCG
droPer2 scaffold_1:1933679-1933865 + TTTGCCA---------------ACAAT--CCACAATGAGACGTCCGAAGAAGGTAAGTGGAAGATCA--ATCGCAC-------------CATTT-CAGACACC--GCTG-------TG----------AGGTTATG-TGGTTGGAG-------------C-------------------ACCT--TCATGC-----------AGCATGTA---AATAACT--CG-------------------------------ATCTT-GTCCTAC-GCAGTACGAAGCCGGAGAGGCCACCCAGTACATCAGTCGTCGGGCGGCGATTCG
droAna3 scaffold_12943:1140345-1140555 - TTGACCAAAGGTGCATTTA-CCTAATCTACCAAAATGAGGCGTCCCAAGAAGGTAAGGGCTTAAGGG---GTATAC-A------------TAGT-TGG-AGTC--CCTA-------TAAAAATATGTAGGGTTATC-TCTA-----ACTGCGTTTTAGAGAGA----------------ATAACATTT--------------------------AATAAT--AC--------------------------------TTTA-TTTAATT-CTAGTACGAATCCGGCGAGGCCACTCAGTATATTAGTCGGCGAGCAGCTCTCAG
droBip1 scf7180000396728:2051878-2052070 + CT---------------------AATTCAACAGAATGAGGCGTCCCAAGAAGGTAAGCGTTTAAGCT---ATACTC-------------CAAGT-TAGAGTCC--CCTA-------TA--AATATGTAGGGTTATC-CCTA-----ACTGCGCTTTAGGAAGA----------------TTTCCATCTA--------------------------ATAATATAT-------------------------------TTTAA-TTTCATT-AAAGTACGAATCCGGCGAGGCCACTCAGTATATTAGCCGGCGAGCAGCTCTCAG
droKik1 scf7180000302472:2068790-2068975 - A----------CGCATTTT-CATAAACCAACAGCATGAGGCGCCCCAAGAAGGTAGGTTTTTCAAAC---ATTTA---------AGGCGCATTT-AA--AGCC--CCTT-------TA----------AGGTTATG-TGTTTTGAG-------------A-------------------ATAT----------------------GCGTA---AATAAAT--AA---------------------------ATCTTTGTA----ATTT-TCAGTACGAATCCGGCGAGGCCACGCAGTATATCAGCCGAAGGGCTGCCCTCAG
droFic1 scf7180000454144:108468-108665 - CT----------ATATTTT-CATAAACCGACAGGATGAGGCGTCCCAAGAAGGTAAGTTTTAACCAAGA-TTA-A---------CTGTGTATTT-AAG-AAAC--CCTT-------TA----------AGGTTATG-TGTAATTTG-------------T-------------------ATCTGCTCAAAG-----------CATATGGA---TTATAAT--GT-------------------------------TTTTA-AATTCTT-TTAGTACGAATCCGGCGAGGCTACGCAATATATTAGCCGGCGGGCTGCACTCAG
droEle1 scf7180000491186:2739887-2740106 - TTGACAAAAAGTGCATTTG-CATAAGCCGAAAGAATGAGGCGACCCAAGAAGGTAGGTTCACATAGC---ATACTG-GGTAGTTATACCTTTTT------AAA--GGTT-------TA----------AGGTTAAGGTTACTTGAG-------------A-------------------CTCCCTGCAAACTATATGCA---CATATGTA---TATTAAT--GT-------------------------------TTTTA-AACATTT-CTAGTACGAGGCCGGCGAGGCCACACAATACATTAGTCGGCGGGCTGCCCTCAG
droRho1 scf7180000778085:223834-224037 + A--------AGGACATTTC-TATAAGCCGGCAAAATGAGGCGACCCAAGAAGGTAGGTTTTGACAGGG--TAGCTG-GA---------TCGTCT-AA--CGAT--TCTTTGAGGTTTA----------AGGTTAAGGTTACTTGAG-------------A-------------------C--CCAACAAAC-----------CATATGGA---TATTAAT--GT-------------------------------TTTTC-AACATTT-CTAGTACGAATCCGGCGAGGCTACGCAATATATAAGTCGGCGAGCTGCCCTCAG
droBia1 scf7180000302408:3448043-3448246 + CTAACTAGAAATACATTTT-CATAAGCCGGCAGCATGAGGCGACCCAAGAAGGTGAGTGCCGATTGG---TAACAG-GG----------TGTTT-ACA-GGAC--CCTT-------TA----------AGGTTATG-TGTATTGGG-------------A-------------------CCCGCTGGCGAG-----------CATATGGA---AATTAAT--GT-------------------------------TT-TA-ACCACTT-CTAGTACGAGTCCGGAGAGGCCACGCAGTACATTAGTCGGCGCGCCGCGCTCAG
droTak1 scf7180000415880:148075-148276 + A-----AGAAGTGCATTTT-CATAGACCGGCAGCATGAGGCGACCGAAGAAGGTGAGTTTTGATGGG---TTATTT-GC----------TACTT-ACG-AGCC--CCTT-------TA----------AGGTTATG-TGTCTTGGG-------------A-------------------CTCCCGCGAAAC-----------CATATGGA---AATTAAT--GT---------------------------TT--TTTTA-AATATTT-TCAGTACGAATCCGGCGAGGCCACGCAGTATATTAGTCGTCGGGCTGCGCTGAG
droEug1 scf7180000409554:5220298-5220496 + C----AAAAAGTGCATTTT-CATAAACCGACAATATGAGGCGACCCAAAAAGGTAAGTTATCATTGG---TTCTAA-GG----------TGTTT-TTG-ACCG--TCTT-------TA----------AGGTTATG-TGTCTTAAA-------------A-------------------ATTT--TAAAAC-----------CATATGGA---TATTAAC--GT-------------------------------TTTTA-AACCTTT-ATAGTACGAATCTGGCGAGGCTACGCAGTATATTAGCCGGCGAGCTGCTATCAG
dm3 chr2L:9710966-9711167 - AC---AAGAAGTGCATTTT-CATAAACCGGCACAATGAGACGACCCAAGAAGGTAGGTTTGCGTTGT---TTTCCG-CG----------TACTT-TTT--TCC--CCTT-------TA----------AGGTTATG-TGTTTTAAG-------------A-------------------CTCCCATGAAAC-----------CATATGGA---AATTAAT--GT-------------------------------TTTTAAAATATTT-TTAGTACGAGTCCGGTGAGGCTACGCAGTACATTAGTCGCCGGGCTGCGCTCAG
droSim2 2l:9393900-9394099 - dsi_9538 C----AAAAAGTGCATTTT-CATAAAACGGCATAATGAGAAGACCGAAGAAGGTAGGTTTGCGTTGA---TTTCGG-GG----------TACTT-TTT--CCC--CCTT-------TA----------AGGTTATG-TGTTTTGAG-------------T-------------------CTCCCATGAAAC-----------CATATGGA---AACTAAT--GT-------------------------------TTTTA-AACATTT-TTAGTACGAATCCGGTGAGGCTACGCAGTACATTAGTCGCCGGGCTGCGCTCAG
droSec2 scaffold_3:5158642-5158841 - C----AAAAAGTGCATTTT-CATAAAACGGCACAATGAGACGACCCAAGAAGGTAGGTTTGCGTTGA---TTTCGG-GG----------TACTT-TTT--TCC--CCTT-------TA----------AGGTTATG-TGTTTTAAG-------------A-------------------CTCCCATGAAAC-----------CATATGGA---AATTAAT--GT-------------------------------TTTTA-AACATTT-TTAGTACGAATCCGGTGAGGCTACGCAGTACATTAGTCGCCGGGCTGCTCTCAG
droYak3 2L:12398394-12398595 - C----AAAAAGTGCATTTT-CATACACCGGCAGAATGAGACGACCCAAGAAGGTAGGTTTTCATTGG---TTTCGG-CG----------CACTT-TTT-GCCG--CCTT-------TA----------AGGTTATG-TGTTTTGAG-------------A-------------------CTCCCACGAAAT-----------CATATGGA---AATTAAT--GT-------------------------------TTTTA-ATCATTTATTAGTACGAATCCGGCGAGGCTACGCAGTACATTAGCCGCCGGGCTGCGCTCAG
droEre2 scaffold_4929:10324570-10324769 - C----AAAAAGTGCATTTT-CATACAGCGGCAGAATGAGACGACCCAAGAAGGTAGGTGTGCATTGC---TTTCGG-CG----------TACTT-TAT--GCT--GCTT-------TA----------AGGTTATG-TGTTTTGAG-------------A-------------------CTCCCACGAATG-----------CATATGGA---AATTAAT--GT-------------------------------TTTTA-TCATTTA-TTAGTACGAATCCGGCGAGGCTACGCAGTACATTAGCCGCCGGGCTGCGCTCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droVir3
CTAATTA--ATAGCCGCTCTATACAACTGTCATAATGCGACGTCCCAAGAAGGTGAGTTGCACTTTA---AATA-CTA------ACACGCAATTTGA--TGCGAAGTTG-------TG----------AGGTTAAA-TTTCATACA-----------------------------------CTAACCAAAT-----GAACGGTATATTGAATTTCTTAGC--ATATTTGCTATGTCCTTTTAACTCTCATG----AT----TTTCTTT-GCAGTACGAGGCTGGCGAAGCCACACAGTATATAAGTCGACGTGCTGCGCTGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................ATACAACTGTCATAATGCGA...........................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
....................ATACAACTGTCATAATGCGACGT........................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................GTCGACGTGCTGCGCTGC.1811.001001000000000000000000000000000000000000000000000000000000000000
..............CGCTCTATACAACTGTCATAAT...............................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................AATGCGACGTCCCAAGAAGGT.............................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................AGTACGAGGCTGGCGAAGCCACACAGT.........................2711.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGTATATAAGTCGACGTGCTGCGCT...2511.001001000000000000000000000000000000000000000000000000000000000000
.........ATAGCCGCTCTATACAACTG......................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
..AATTA--ATAGCCGCTCTATACAACTGTC....................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...........AGCCGCTCTATACAACTGTC....................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.........ATAGCCGCTCTATACAACT.......................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACGAGGCTGGCGAAGCCACACA...........................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATATAAGTCGACGTGCTGCGCTGC.2411.001000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GTATATAAGTCGACGTGCTG.......2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................CGACGTCCCAAGAAGGTGAGT.........................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
..............CGCTCTATACAACTGTCATAATGCGACGT........................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGTCGACGTGCTGCGCTGC.1911.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGGCGAAGCCACACAGTATATAAGTCA...............2711.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GTACGAGGCTGGCGAAGCCACACAGT.........................2611.001000000000000000000000000000000001000000000000000000000000000000
...........AGCCGCTCTATACAACTGTCA...................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................AACTGTCATAATGCGACG.........................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
....................ATACAACTGTCATAATGCG............................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ACGAGGCTGGCGAAGCCACACA...........................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AGCCACACAGTATATAAGTCGAC.............2311.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................CGAGGCTGGCGAAGCCACAC............................2011.001001000000000000000000000000000000000000000000000000000000000000
...ATTA--ATAGCCGCTCTATACAACTG......................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...........................TGTCATAATGCGACGTCCC.....................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................ATAATGCGACGTCCCAAGA.................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..............CGCTCTATACAACTGTCATAATG..............................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
.................................AATGCGACGTCCCAAGAAGGTGAGTTG.......................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
...................TATACAACTGTCATAATGCG............................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
......A--ATAGCCGCTCTATACAACTGTCATAAT...............................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GCCACACAGTATATAAGTCGACGTGCT........2711.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
ATATCTAA--CTGCTGCACTGCAAGACTTTCACAATGAGGCGTCCCAAGAAGGTATGTTAACATATT---AACC-AAA------AGACGCAATTAGT--TGCG--ATTG-------CG----------AGGTTATT-TTTTA----ACCGG--------AATATGCATAGACTCTGAGTTTTCCACAA------------------TTTA---AAT------TG-------------------------------ATT----TTATTT-GCAGTACGAAGCCGGTGAGGCCACACAATATATAAGCCGGCGCGCAGCACTGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................ATATATAAGCCGGCGCGCA........1912.002200000
..................................................................................................................................................................................................................................................................................................CACACAATATATAAGCCGGCGCGCA........2512.002200000
........................GACTTTCACAATGAGGCGTCCCAAGAAG...............................................................................................................................................................................................................................................................................2811.001100000
...TCTAA--CTGCTGCACTGCAAGACTTT.....................................................................................................................................................................................................................................................................................................2511.001000010
...........................................................................................................................................................................................................................................................................................................TATAAGCCGGCGCGCAGCA.....1911.001100000
...........................TTTCACAATGAGGCGTCCCAAGA.................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................................................................................................................................................................ATAAGCCGGCGCGCAGCACT...2011.001100000
..................................................................................................................................................................................................................................................................................................CACACAATATATAAGCCGG..............1911.001000001
........................................................................................................................................................................................................................................................................................................ATATATAAGCCGGCGCGCAGC......2111.001100000
droGri2
CTAATAAA--TAGCTGCTCTAACAGACCGCCACAATGAGACGTCCCAAGAAGGTATGTTTCAAGTAA---AATA-GTA------ACACGCAATTCAC--AGCAAAACTG-------TG----------AGGTTATT-TTCAATACA-CT-------------------------------ACACAATAAAG------CAAAGCACAGCCATTTTATCAAT--CT-------------------------------GTTTG-TCACTTC-ACAGTACGAGTCCGGCGAGGCCACACAGTACATTAGCCGGCGTGCGGCGCTGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................GTACGAGTCCGGCGAGGC.................................1811.00110
.....................ACAGACCGCCACAATGAGACG.........................................................................................................................................................................................................................................................................................2111.00101
................................................................................................................................................................................................................................................................................GTACGAGTCCGGCGAGGCCAC..............................2111.00110
.......A--TAGCTGCTCTAACAGACCGCCACA.................................................................................................................................................................................................................................................................................................2511.00110
....................AACAGACCGCCACAATGAGACGTCC......................................................................................................................................................................................................................................................................................2511.00110
droWil2
CCTAGACA---CAGAC----TACCTTCCAACACAATGAGACGTCCTAAGAAGGTGGGTGACA-------------------------CGA--------------------------------------------------ATTTAA-------------A-------------------ACTAAAAAATAT-----------CACACAGA---TTCTC-----T-------------------------------AATCA-ATCATCC-ACAGTACGAGTCAGGTGAGGCCACTCAGTATATCAGCCGTCGTGCTGCCTTGCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................GTACGAGTCAGGTGAGGC.................................1812.00200020
..................................................................................................................................................................................................................................................................................................CACTCAGTATATCAGCCGTCGTGC.........2411.00100100
.......................................................................................................................................................................................................................................................................................................AGTATATCAGCCGTCGTGC.........1911.00110000
..........................CCAACACAATGAGACGTCCTAAG..................................................................................................................................................................................................................................................................................2311.00100100
.......A---CAGAC----TACCTTCCAACACAATGA.............................................................................................................................................................................................................................................................................................2411.00101000
....................................................GTGGGTGACA-------------------------CGA--------------------------------------------------ATTTAA-------------A-------------------................................................................................................................................................2011.00100010
...................................................................................................................................................................................................................................................................................................ACTCAGTATATCAGCCGTCGT...........2111.00100010
................................................................................................................................................................................................................................................................................GTACGAGTCAGGTGAGGCCACTC............................2311.00100010
..................................ATGAGACGTCCTAAGAAGTAC............................................................................................................................................................................................................................................................................2111.00100010
.....................................................................................................................................................................................................................................................................................AGTCAGGTGAGGCCACTCAGTATATCA...................2711.00100010
................................................................................................................................................................................................................................................................................GTACGAGTCAGGTGAGGCCACTCA...........................2411.00100010
.........................TCCAACACAATGAGACGTCCT.....................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................................................AGTACGAGTCAGGTGAGGCCACTCA...........................2511.00100010
.........................................GTCCTAAGAAGGTGGGTGAC......................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................................................................................................................................................................................................TACGAGTCAGGTGAGGCCACTCAGTA........................2611.00101000
....................TACCTTCCAACACAATGAGACGTCC......................................................................................................................................................................................................................................................................................2511.00101000
.........................TCCAACACAATGAGACGTCCTA....................................................................................................................................................................................................................................................................................2211.00101000
......................................................................................................................................................................................................................................................................................GTCAGGTGAGGCCACTCA...........................1811.00100010
......................................................................................................................................................................................................................................................................................GTCAGGTGAGGCCACTCAGTATATC....................2511.00100010
............AGAC----TACCTTCCAACACAATGAGACGT........................................................................................................................................................................................................................................................................................2711.00100010
..........................CCAACACAATGAGACGTCCTAAGAA................................................................................................................................................................................................................................................................................2511.00100010
dp5
TTTGCCA---------------ACAAT--CCACAATGAGACGTCCGAAGAAGGTAAGTGGAAGATCA--ATCGCAC-------------CATTT-CAGACACC--GCTG-------TG----------AGGTTATG-TGGTTGGAG-------------C-------------------ACCT--TCATCC-----------AGCATGTA---AATAACT--CG-------------------------------ATCTT-GTCCTAC-GCAGTACGAAGCCGGAGAGGCCACCCAGTACATCAGTCGTCGGGCGGCGATTCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....CCA---------------ACAAT--CCACAATGAGACGT........................................................................................................................................................................................................................................................................................2211.0010100000000
...................................TGAGACGTCCGAAGAAGGTAA...........................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................TACATCAGTCGTCGGGCGGC......2011.0010000000010
................................................................................................................................................................................................................................................................................GTACGAAGCCGGAGAGGCCACCCAGTA........................2711.0010000100000
.............................................................................................................................................................................................................................................................................................................TCAGTCGTCGGGCGGCGATG..2011.0010010000000
droPer2
TTTGCCA---------------ACAAT--CCACAATGAGACGTCCGAAGAAGGTAAGTGGAAGATCA--ATCGCAC-------------CATTT-CAGACACC--GCTG-------TG----------AGGTTATG-TGGTTGGAG-------------C-------------------ACCT--TCATGC-----------AGCATGTA---AATAACT--CG-------------------------------ATCTT-GTCCTAC-GCAGTACGAAGCCGGAGAGGCCACCCAGTACATCAGTCGTCGGGCGGCGATTCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................CACCCAGTACATCAGTCGTCGGGCGGC......2715.005500000
........................................................................................................................................................................................................................................................................................................GTACATCAGTCGTCGGGCGGC......2114.004400000
.....................................................................................................................................................................................................................................................................................................CCAGTACATCAGTCGTCGGGC.........2113.003300000
......................................................................................................................................................................................................................................................................................................CAGTACATCAGTCGTCGGG..........1913.003300000
..........................................................................................................................................................................................................................................................................................................ACATCAGTCGTCGGGCGGC......1913.003300000
.....................................................................................................................................................................................................................................................................................................CCAGTACATCAGTCGTCGGGCGGC......2413.003300000
...........................................................................................................................................................................................................................................................................................................CATCAGTCGTCGGGCGGC......1813.003300000
..................................................................................................................................................................................................................................................................................................CACCCAGTACATCAGTCGTCGGGC.........2412.002200000
......................................................................................................................................................................................................................................................................................................CAGTACATCAGTCGTCGGGCGGC......2311.001100000
..........................T--CCACAATGAGACGTCCGAAGAAGTAC............................................................................................................................................................................................................................................................................2711.001010000
...................................................................................................................................................................................................................................................................................................ACCCAGTACATCAGTCGTCGGGCGGC......2611.001100000
.........................AT--CCACAATGAGACGTCCGAAGAA................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................CATCAGTCGTCGGGCGGG......1820.501100000
droAna3
TTGACCAAAGGTGCATTTA-CCTAATCTACCAAAATGAGGCGTCCCAAGAAGGTAAGGGCTTAAGGG---GTATAC-A------------TAGT-TGG-AGTC--CCTA-------TAAAAATATGTAGGGTTATC-TCTA-----ACTGCGTTTTAGAGAGA----------------ATAACATTT--------------------------AATAAT--AC--------------------------------TTTA-TTTAATT-CTAGTACGAATCCGGCGAGGCCACTCAGTATATTAGTCGGCGAGCAGCTCTCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................GTACGAATCCGGCGAGGCC................................1911.001010000
.......................................................................................................................................................................................................................................................................................TCCGGCGAGGCCACTCAGTATATTAGT.................2711.001100000
......................................................................GTATAC-A------------TAGT-TGG-AGTC--CCC.......................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................GTACGAATCCGGCGAGGCCACT.............................2211.001010000
..........................................................................................................................................................................................................................................................................................................ATATTAGTCGGCGAGCAGCTCTCA.2411.001000010
................................................................................................................................................................................................................................................................................GTACGAATCCGGCGAGGCCACTCAGT.........................2611.001010000
................................................................................................................................................................................................................................................................................GTACGAATCCGGCGAGGC.................................1811.001010000
..GACCAAAGGTGCATTTA-CCTAATCTACC....................................................................................................................................................................................................................................................................................................2811.001010000
droBip1
CT---------------------AATTCAACAGAATGAGGCGTCCCAAGAAGGTAAGCGTTTAAGCT---ATACTC-------------CAAGT-TAGAGTCC--CCTA-------TA--AATATGTAGGGTTATC-CCTA-----ACTGCGCTTTAGGAAGA----------------TTTCCATCTA--------------------------ATAATATAT-------------------------------TTTAA-TTTCATT-AAAGTACGAATCCGGCGAGGCCACTCAGTATATTAGCCGGCGAGCAGCTCTCAGSizeHit CountTotal NormTotal
No Reads
droKik1
A----------CGCATTTT-CATAAACCAACAGCATGAGGCGCCCCAAGAAGGTAGGTTTTTCAAAC---ATTTA---------AGGCGCATTT-AA--AGCC--CCTT-------TA----------AGGTTATG-TGTTTTGAG-------------A-------------------ATAT----------------------GCGTA---AATAAAT--AA---------------------------ATCTTTGTA----ATTT-TCAGTACGAATCCGGCGAGGCCACGCAGTATATCAGCCGAAGGGCTGCCCTCAGSizeHit CountTotal NormTotal
No Reads
droFic1
CT----------ATATTTT-CATAAACCGACAGGATGAGGCGTCCCAAGAAGGTAAGTTTTAACCAAGA-TTA-A---------CTGTGTATTT-AAG-AAAC--CCTT-------TA----------AGGTTATG-TGTAATTTG-------------T-------------------ATCTGCTCAAAG-----------CATATGGA---TTATAAT--GT-------------------------------TTTTA-AATTCTT-TTAGTACGAATCCGGCGAGGCTACGCAATATATTAGCCGGCGGGCTGCACTCAGSizeHit CountTotal NormTotal
No Reads
droEle1
TTGACAAAAAGTGCATTTG-CATAAGCCGAAAGAATGAGGCGACCCAAGAAGGTAGGTTCACATAGC---ATACTG-GGTAGTTATACCTTTTT------AAA--GGTT-------TA----------AGGTTAAGGTTACTTGAG-------------A-------------------CTCCCTGCAAACTATATGCA---CATATGTA---TATTAAT--GT-------------------------------TTTTA-AACATTT-CTAGTACGAGGCCGGCGAGGCCACACAATACATTAGTCGGCGGGCTGCCCTCAGSizeHit CountTotal NormTotal
No Reads
droRho1
A--------AGGACATTTC-TATAAGCCGGCAAAATGAGGCGACCCAAGAAGGTAGGTTTTGACAGGG--TAGCTG-GA---------TCGTCT-AA--CGAT--TCTTTGAGGTTTA----------AGGTTAAGGTTACTTGAG-------------A-------------------C--CCAACAAAC-----------CATATGGA---TATTAAT--GT-------------------------------TTTTC-AACATTT-CTAGTACGAATCCGGCGAGGCTACGCAATATATAAGTCGGCGAGCTGCCCTCAGSizeHit CountTotal NormTotal
No Reads
droBia1
CTAACTAGAAATACATTTT-CATAAGCCGGCAGCATGAGGCGACCCAAGAAGGTGAGTGCCGATTGG---TAACAG-GG----------TGTTT-ACA-GGAC--CCTT-------TA----------AGGTTATG-TGTATTGGG-------------A-------------------CCCGCTGGCGAG-----------CATATGGA---AATTAAT--GT-------------------------------TT-TA-ACCACTT-CTAGTACGAGTCCGGAGAGGCCACGCAGTACATTAGTCGGCGCGCCGCGCTCAGSizeHit CountTotal NormTotal
No Reads
droTak1
A-----AGAAGTGCATTTT-CATAGACCGGCAGCATGAGGCGACCGAAGAAGGTGAGTTTTGATGGG---TTATTT-GC----------TACTT-ACG-AGCC--CCTT-------TA----------AGGTTATG-TGTCTTGGG-------------A-------------------CTCCCGCGAAAC-----------CATATGGA---AATTAAT--GT---------------------------TT--TTTTA-AATATTT-TCAGTACGAATCCGGCGAGGCCACGCAGTATATTAGTCGTCGGGCTGCGCTGAGSizeHit CountTotal NormTotal
No Reads
droEug1
C----AAAAAGTGCATTTT-CATAAACCGACAATATGAGGCGACCCAAAAAGGTAAGTTATCATTGG---TTCTAA-GG----------TGTTT-TTG-ACCG--TCTT-------TA----------AGGTTATG-TGTCTTAAA-------------A-------------------ATTT--TAAAAC-----------CATATGGA---TATTAAC--GT-------------------------------TTTTA-AACCTTT-ATAGTACGAATCTGGCGAGGCTACGCAGTATATTAGCCGGCGAGCTGCTATCAGSizeHit CountTotal NormTotal
No Reads
dm3
AC---AAGAAGTGCATTTT-CATAAACCGGCACAATGAGACGACCCAAGAAGGTAGGTTTGCGTTGT---TTTCCG-CG----------TACTT-TTT--TCC--CCTT-------TA----------AGGTTATG-TGTTTTAAG-------------A-------------------CTCCCATGAAAC-----------CATATGGA---AATTAAT--GT-------------------------------TTTTAAAATATTT-TTAGTACGAGTCCGGTGAGGCTACGCAGTACATTAGTCGCCGGGCTGCGCTCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....AAGAAGTGCATTTT-CATAAACCGGC....................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACCGGCACAATGAGACG.........................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ACGAGTCCGGTGAGGCTACGCAGT.........................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TAGTCGCCGGGCTGCGCTCAG2113.0030000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................ATAAACCGGCACAATGAGACGACCC.....................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ACATTAGTCGCCGGGCTGCGCTC..2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CATTAGTCGCCGGGCTGCGCT...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ACGAGTCCGGTGAGGCTACGCA...........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000
...........................CGGCACAATGAGACGACCCAAGAAGT..............................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAGTCCGGTGAGGCTACGCAGTACA......................2512.0020000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TACATTAGTCGCCGGGCTGC......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GTACATTAGTCGCCGGGCTGCGC....2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
......AGAAGTGCATTTT-CATAAACCGGC....................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ACGCAGTACATTAGTCGCCGG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................CGAGTCCGGTGAGGCTACGCA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACAATGAGACGACCCAAGAAGG..............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................AAC-----------CATATGGA---AATTAAT--GT-------------------------------TTT.................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAGTCCGGTGAGGCTACGCAGTAC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................ACGCAGTACATTAGTCGCC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATGAGACGACCCAAGAAGTA.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAATGAGACGACCCAAGAAGT..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATTAGTCGCCGGGCTGCG.....1811.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCAGTACATTAGTCGCCGGGCTG.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATTAGTCGCCGGGCTGCGCTCA.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........AGTGCATTTT-CATAAACCGGC....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGTCGCCGGGC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................CGGCACAATGAGACGACCCAAGA.................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TTAGTACGAGTCCGGTGAGGC.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...........................................CCCAAGAAGGTAGGTTTGCGT...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACCGGCACAATGAGACGACC......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTCCGGTGAGGCTACGCAGT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TCCCATGAAAC-----------CATATGGA---A.............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGTCGCCGGGCT........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CCGGTGAGGCTACGCAGTACATT....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................AGACGACCCAAGAAGGTA............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CCGGCACAATGAGACGACCCAAGA.................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CAATGAGACGACCCAAGAAG...............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACAATGAGACGACCCAAGAAGT..............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...........................................CCCAAGAAGGTAGGTTTGCG....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....................CATAAACCGGCACAATGAGA...........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATGAGACGACCCAAGAAGT..............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TT-CATAAACCGGCACAATGAGACGACC......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................TCGCCGGGCTGCGCTCAG1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAAACCGGCACAATGAGACGACCCAA...................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GTACATTAGTCGCCGGGCTGCGCTC..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TAAG-------------A-------------------CTCCCATGAAAC-----------CATA.....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................CGGTGAGGCTACGCAGTA........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATGAGACGACCCAAGAAGG..............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGTCGCCGG...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTT-CATAAACCGGCACAATGAGACG.........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CAGTACATTAGTCGCCGGGC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................GTACATTAGTCGCCGGGCT........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................CACAATGAGACGACCCAAGAAGTA.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TACGAGTCCGGTGAGGCTACGCAGT.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ACCGGCACAATGAGACGACCCAA...................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACAATGAGACGACCCAAG..................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGTCGCCGGGCTGCGCTCAG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................GTACGAGTCCGGTGAGGC.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................GTCCGGTGAGGCTACGCAGTACATT....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTT-CATAAACCGGCACAATGAGACGAC.......................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CGGTGAGGCTACGCAGTACA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATAAACCGGCACAATGAGAC..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GGTTATG-TGTTTTAAG-------------A-------------------CTC.............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTT-CATAAACCGGCACAATGAG............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAGTGCATTTT-CATAAACC.......................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GTGAGGCTACGCAGTACATTAG..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
C----AAAAAGTGCATTTT-CATAAAACGGCATAATGAGAAGACCGAAGAAGGTAGGTTTGCGTTGA---TTTCGG-GG----------TACTT-TTT--CCC--CCTT-------TA----------AGGTTATG-TGTTTTGAG-------------T-------------------CTCCCATGAAAC-----------CATATGGA---AACTAAT--GT-------------------------------TTTTA-AACATTT-TTAGTACGAATCCGGTGAGGCTACGCAGTACATTAGTCGCCGGGCTGCGCTCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................GTACATTAGTCGCCGGGC.........1818.00801610000000000000
...................................................................................................................................................................................................................................................................................................ACGCAGTACATTAGTCGCCGGGCTGCGCT...2912.00202000000000000000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGTCGCCGGGC.........2412.00200000010000010000
............................GGCATAATGAGAAGACC......................................................................................................................................................................................................................................................................................1711.00100000000001000000
.................................................................................................................................................................................................................................................................................................CTACGCAGTACATTAGTCGCCG............2211.00100100000000000000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGTCGCCGGGCT........2511.00100100000000000000
................................................................................................................................................................................................................................................................................GTACGAATCCGGTGAGGC.................................1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGTCGCCGGGCG........2511.00100100000000000000
.............CATTTT-CATAAAACGGCATAATGAGAA..........................................................................................................................................................................................................................................................................................2711.00100000000000010000
...............................ATAATGAGAAGACCGAAGAA................................................................................................................................................................................................................................................................................2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................GTACATTAGTCGCCGGGCTGC......2111.00101000000000000000
.....................ATAAAACGGCATAATGAGAAGACCGAA...................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................................................................................................................................................................................................................................................................AGTACATTAGTCGCCGGGCTGC......2211.00101000000000000000
.................................................................................................................................................................................................................................................................................TACGAATCCGGTGAGGCTACGCAGTACA......................2811.00100000000000010000
....................................................................................................................................................................................................................................................................................................CGCAGTACATTAGTCGCCGGGC.........2211.00100000000000010000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGTCGCCGGGCTG.......2611.00100100000000000000
....................................................GTAGGTTTGCGTTGA---TTTCGG-GG----------TACTT-....................................................................................................................................................................................................................................2811.00100000010000000000
........................................................................................................................................................................................................................................................................................................GTACATTAGTCGCCGGGCTGCGCTCAG2711.00100010000000000000
..................................................................................................................................GTTATG-TGTTTTGAG-------------T-------------------CTCCCATGA.......................................................................................................................................2511.00100000000000100000
......................................................................................................................................................................................................................................................................................................CAGTACATTAGTCGCCGGGC.........2011.00110000000000000000
droSec2
C----AAAAAGTGCATTTT-CATAAAACGGCACAATGAGACGACCCAAGAAGGTAGGTTTGCGTTGA---TTTCGG-GG----------TACTT-TTT--TCC--CCTT-------TA----------AGGTTATG-TGTTTTAAG-------------A-------------------CTCCCATGAAAC-----------CATATGGA---AATTAAT--GT-------------------------------TTTTA-AACATTT-TTAGTACGAATCCGGTGAGGCTACGCAGTACATTAGTCGCCGGGCTGCTCTCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................AGTCGCCGGGCTGCTCTCAG2012.0020002
......................................................................................................................................................................................................................................................................................ATCCGGTGAGGCTACGCA...........................1812.0020020
....................................................................................................................................................................................................................................................................................GAATCCGGTGAGGCTACGCA...........................2011.0010010
................................................................................................................................................................................................................................................................................GTACGAATCCGGTGAGGCTACGCA...........................2411.0010010
............................................................................................................................................................................................................................................................................................................ATTAGTCGCCGGGCTGCTCTCAG2311.0011000
.................TT-CATAAAACGGCACAATGAGA...........................................................................................................................................................................................................................................................................................2211.0010010
............................................................................................................................................................................................................................................................................................................ATTAGTCGCCGGGCTGCT.....1811.0010010
.................................................................................................................................................................................................................................................................................................CTACGCAGTACATTAGTC................1811.0010010
....................CATAAAACGGCACAATGAGACG.........................................................................................................................................................................................................................................................................................2211.0010010
.....................................................................................................................................................................................................................................................................................................GCAGTACATTAGTCGCCGGGCTGC......2411.0010010
..............................CACAATGAGACGACCCAAGA.................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................GTACGAATCCGGTGAGGCT................................1911.0010010
..............ATTTT-CATAAAACGGCACAATGA.............................................................................................................................................................................................................................................................................................2311.0010010
........................................................................................................................................................................................................................................................................................................GTACATTAGTCGCCGGGCTGCTCTCA.2611.0010100
................................................................................................................................................................................................................................................................................GTACGAATCCGGTGAGGC.................................1811.0010001
.............................................................................................................................................................................................................................................................................................................TTAGTCGCCGGGCTGCTCT...1911.0010010
droYak3
C----AAAAAGTGCATTTT-CATACACCGGCAGAATGAGACGACCCAAGAAGGTAGGTTTTCATTGG---TTTCGG-CG----------CACTT-TTT-GCCG--CCTT-------TA----------AGGTTATG-TGTTTTGAG-------------A-------------------CTCCCACGAAAT-----------CATATGGA---AATTAAT--GT-------------------------------TTTTA-ATCATTTATTAGTACGAATCCGGCGAGGCTACGCAGTACATTAGCCGCCGGGCTGCGCTCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................AGGCTACGCAGTACATTAGCCGCCGGGCT........2912.00200000000002
............................................................................................................................................................................................................................................................................................................ATTAGCCGCCGGGCTGCGCTC..2111.00100100000000
...............................AGAATGAGACGACCCAAGAAGC..............................................................................................................................................................................................................................................................................2211.00100100000000
...................................................................................................................................................................................................................................................................................CGAATCCGGCGAGGCTAC..............................1811.00100100000000
......................TACACCGGCAGAATGAGACGAC.......................................................................................................................................................................................................................................................................................2211.00100100000000
......................................................................................................................................................................................................................................................................................ATCCGGCGAGGCTACGCA...........................1811.00101000000000
...............................................................................................................................................................................................................................................................................AGTACGAATCCGGCGAGGCTACGCA...........................2511.00100000010000
................................GAATGAGACGACCCAAGAA................................................................................................................................................................................................................................................................................1911.00100100000000
.................TT-CATACACCGGCAGAATGAGA...........................................................................................................................................................................................................................................................................................2211.00100100000000
................TTT-CATACACCGGCAGAATGAGACGA........................................................................................................................................................................................................................................................................................2611.00100010000000
....................................................................................................................................................................................................................................................................................................CGCAGTACATTAGCCGCCGGGCT........2311.00100000010000
....................................................................................................................................................................................................................................................................................GAATCCGGCGAGGCTACGCA...........................2011.00101000000000
............................GGCAGAATGAGACGACCC.....................................................................................................................................................................................................................................................................................1811.00100100000000
..................T-CATACACCGGCAGAATGAGA...........................................................................................................................................................................................................................................................................................2111.00100000010000
........................................................................................................................................................................................................................................................................................................GTACATTAGCCGCCGGGCTGCGCTC..2511.00101000000000
......................TACACCGGCAGAATGAGAC..........................................................................................................................................................................................................................................................................................1911.00100100000000
................................................................................................................................................................................................................................................................................GTACGAATCCGGCGAGGC.................................1811.00100100000000
....................................................................................................................................................................................................................................................................................................CGCAGTACATTAGCCGCCGGGCTGC......2511.00100100000000
..................................................................................................................................................................................................................................................................................................TACGCAGTACATTAGCCGCCGGGC.........2411.00101000000000
................TTT-CATACACCGGCAGAATGAGA...........................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................................................................................................................................GTACGAATCCGGCGAGGCTACGCA...........................2411.00100000010000
droEre2
C----AAAAAGTGCATTTT-CATACAGCGGCAGAATGAGACGACCCAAGAAGGTAGGTGTGCATTGC---TTTCGG-CG----------TACTT-TAT--GCT--GCTT-------TA----------AGGTTATG-TGTTTTGAG-------------A-------------------CTCCCACGAATG-----------CATATGGA---AATTAAT--GT-------------------------------TTTTA-TCATTTA-TTAGTACGAATCCGGCGAGGCTACGCAGTACATTAGCCGCCGGGCTGCGCTCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................GAGGCTACGCAGTACATTAGCCGCCGGGC.........29121.002100000021
.................TT-CATACAGCGGCAGAATGAGACGACCCA....................................................................................................................................................................................................................................................................................2911.0011000000
...................................................................................................................................................................................................................................................................................................ACGCAGTACATTAGCCGCCGGGCTGC......2611.0010100000
...............TTTT-CATACAGCGGCAGAATGA.............................................................................................................................................................................................................................................................................................2211.0010000100
..................T-CATACAGCGGCAGAATGAGA...........................................................................................................................................................................................................................................................................................2111.0010000010
...............................AGAATGAGACGACCCAAGAA................................................................................................................................................................................................................................................................................2011.0010100000
........................................................................................................................................................................................................................................................................................................GTACATTAGCCGCCGGGCTGC......2111.0010001000
...............................AGAATGAGACGACCCAAGAAGTAC............................................................................................................................................................................................................................................................................2411.0011000000
......................TACAGCGGCAGAATGAGACGACCCA....................................................................................................................................................................................................................................................................................2511.0010001000
............................................................................................................................................................................................................................................................................................CGAGGCTACGCAGTACATTAGC.................2211.0011000000
..................T-CATACAGCGGCAGAATGAGACGAC.......................................................................................................................................................................................................................................................................................2511.0010000100
................................................................................................................................................................................................................................................................................GTACGAATCCGGCGAGGCTACGCA...........................2411.0010000100
..............ATTTT-CATACAGCGGCAGA.................................................................................................................................................................................................................................................................................................1911.0010001000
........................................................................................................................................................................................................................................................................................................GTACATTAGCCGCCGGGCTGCGCTCA.2611.0010000100
..................................................................................................................................................................................................................................................................................ACGAATCCGGCGAGGCTACGCAGTA........................2511.0010000100

Generated: 05/16/2015 at 07:45 PM