dvi_10006

CDS [Dvir\GJ14663-cds]; exon [dvir_GLEANR_1481:1]; exon [dvir_GLEANR_1481:2]; CDS [Dvir\GJ14663-cds]; intron [Dvir\GJ14663-in]

--------------------------------##################--------------------------------------------------------------------------------------################################################## GTTTTTTCAAGGGCAACCAACAGAGCGTTAACATGTCCAGCATCAGGCCGGTAAGATGTCTCTACTTGCTGTAGGGTGTAGAACCGAAAGAATTTTCATTAAAACAGTCCACGGCTGTTGTCCTCGTTCTTTACAGCATGCCATGCTCGTGTTGCTGGCTGCAGTAGCTGCAGTGGACACAGAAGT ************************************************..................((((..............(((((((.........(((((((...)))))))......)))))))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR060655 9x160_testes_total	SRR060683 160_testes_total	SRR060659 Argentina_testes_total	SRR060670 9_testes_total	SRR060657 140_testes_total	SRR060681 Argx9_testes_total	SRR060689 160x9_testes_total	M027 male body	SRR060680 9xArg_testes_total	V053 head	SRR060666 160_males_carcasses_total
.........................................................................................................................................ATGCCATGCTCGTGTTGCTGT............................	21	1	1	7.00	7	4	3	0	0	0	0	0	0	0	0	0
..............................................................................................................................................ATGCTCGTGTTGCTGGCTGC........................	20	0	1	7.00	7	4	0	3	0	0	0	0	0	0	0	0
.........................................................................................................................................ATGCCATGCTCGTGTTGCTGTCTGC........................	25	1	1	5.00	5	4	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................TGCCATGCTCGTGTTGCT..............................	18	0	1	4.00	4	1	3	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................AGCTGCAGTGGACACAGAG..	19	1	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0
...........................................................................................................................................GCCATGCTCGTGTTGCTGTCTGC........................	23	1	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
..............AACCAACAGAGCGTTAACATGTCC....................................................................................................................................................	24	0	1	3.00	3	0	2	1	0	0	0	0	0	0	0	0
..............................................................................................................................................ATGCTCGTGTTGCTGTCTGC........................	20	1	1	3.00	3	1	1	0	0	1	0	0	0	0	0	0
..............................................................................................................................................ATGCTCGTGTTGCTGTCTGCAGT.....................	23	1	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0
.........................................................................................................................................ATGCCATGCTCGTGTTGCTGTCTGCA.......................	26	1	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
..............AACCAACAGAGCGTTAACATGTCCAGC.................................................................................................................................................	27	0	1	2.00	2	0	0	0	0	0	1	1	0	0	0	0
.........................................................................................................................................ATGCCATGCTCGTGTTGCT..............................	19	0	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
................................................................................................................................................GCTCGTGTTGCTGGCTGC........................	18	0	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
......TCAAGGGCAACCAACAGAGC................................................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................ATGCTCGTGTTGCTGTCTGCA.......................	21	1	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........AAGGGCAACCAACAGAGCGTT.............................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................ATGCCATGCTCGTGTTGCTGTC...........................	22	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGCTGTCTGCAGTAGCTGCAGTGGA.........	25	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................CATGCTCGTGTTGCTGGCTGC........................	21	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................AGTAGCTGCAGTGGACACCGCA..	22	2	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................AGCTGCAGTGGACACAGAAGT	21	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TGCCATGCTCGTGTTGCTGTCTGC........................	24	1	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................AACAGAGCGTTAACATGTCCA...................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................ATGCCATGCTCGTGTTGCTGG............................	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................TGCCATGCTCGTGTTGCTG.............................	19	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................CGTGTTGCTGGCTGCAGT.....................	18	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........GGCAACCAACAGAGCGTT.............................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...............................CATGTCCAGCATCAGGCCG........................................................................................................................................	19	0	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................AGTAGCTGCAGTGGACACAGAG..	22	1	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................AGCTGCAGTGGACACAGAGGT	21	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...............ACCAACAGAGCGTTAACATGTC.....................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................ATGCTCGTGTTGCTGGCT..........................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................AGTAGCTGCAGTGGACAC......	18	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TGCCATGCTCGTGTTGCTGGCTGCAGT.....................	27	0	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0
........................................................................................................................................................................TGCAGTGGACACAGAGGT	18	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.................CAACAGAGCGTTAACATGTC.....................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................AGAGCGTTAACATGTCCAGCATCA.............................................................................................................................................	24	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................GCTCGTGTTGCTGGCTGCA.......................	19	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
...TTTTCAAGGGCAACCAACAGAGCGT..............................................................................................................................................................	25	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................ATGTCCAGCATCAGGCCGG.......................................................................................................................................	19	0	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................GCTCGTGTTGCTGTCTGC........................	18	1	3	0.67	2	0	2	0	0	0	0	0	0	0	0	0
...........................TTCACTGGTCCAGCATCAG............................................................................................................................................	19	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1

CAAAAAAGTTCCCGTTGGTTGTCTCGCAATTGTACAGGTCGTAGTCCGGCCATTCTACAGAGATGAACGACATCCCACATCTTGGCTTTCTTAAAAGTAATTTTGTCAGGTGCCGACAACAGGAGCAAGAAATGTCGTACGGTACGAGCACAACGACCGACGTCATCGACGTCACCTGTGTCTTCA ************************************************..................((((..............(((((((.........(((((((...)))))))......)))))))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M027 male body	SRR060681 Argx9_testes_total
.................................................TCATTCTGCAGAGATGAA.......................................................................................................................	18	2	4	0.25	1	1	0
...........................................................................................................AGGTCCCGACAACAGGAC.............................................................	18	2	7	0.14	1	1	0
..........CCCTTTAGTTCTCTCGCAAT............................................................................................................................................................	20	3	8	0.13	1	0	1
..............................................................................................AAGTACACTTGTCAGGTGCC........................................................................	20	3	8	0.13	1	1	0

Species	Coordinate	ID	Alignment
droVir3	scaffold_12963:1255425-1255610 +	dvi_10006	GTTTTTTCAAGGGCAACC------AACAGAGCGTTAACATGTCCAGCATCAGGCCGGTAAGATGTCT-----CTACTTGCTGTAGGGTGTAG-AACCGAAAGAATTTTCATTAAAACAGTCCACGGCTGTTGTCCTCGTTCTTTACAGCATGCCATGCTCGTGTTGCTGGCTGCAGTAGCTGCAGTGGACACAGAAGT
droMoj3	scaffold_6500:28056093-28056268 +		ATTTCTTCACAGACGACCCGTCTAGGCGAATAATTGACATGGTCAAAACCAAGCTGGTAAGATGACG-----ACACCCAGAGCACGGC--TA-AATCAGAAGAGGTTGCCTTCACA-------------TAGGATTCGATCTTTACAGCTATCGCTGCTCTTGCTGCTGATTGCACTC-CCGCAAAGAATGGAGGCGA
droGri2	scaffold_15126:7227812-7227957 -		ATGCTTTTATT---TTTC------AATCAATTTTTTTTATGGCCAGAATCACGTTGGTATAGTTTCTAAGTTTTACTGACAACAATAAATCGCATTCAAAAGTATTT-------TA-------------ATGGTTTCGTTCATTTTAGCTTACCCTGCTCGTGTTACTTGTGGCA-----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droVir3

GTTTTTTCAAGGGCAACC------AACAGAGCGTTAACATGTCCAGCATCAGGCCGGTAAGATGTCT-----CTACTTGCTGTAGGGTGTAG-AACCGAAAGAATTTTCATTAAAACAGTCCACGGCTGTTGTCCTCGTTCTTTACAGCATGCCATGCTCGTGTTGCTGGCTGCAGTAGCTGCAGTGGACACAGAAGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....................................................................................................................................................ATGCCATGCTCGTGTTGCTGT............................	21	1	7.00	7	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ATGCTCGTGTTGCTGGCTGC........................	20	1	7.00	7	0	0	0	0	0	4	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TGCCATGCTCGTGTTGCT..............................	18	1	4.00	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................AGCTGCAGTGGACACAGAG..	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AACC------AACAGAGCGTTAACATGTCC..........................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............AACC------AACAGAGCGTTAACATGTCCAGC.......................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................ATGCCATGCTCGTGTTGCT..............................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................GCTCGTGTTGCTGGCTGC........................	18	1	2.00	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TCAAGGGCAACC------AACAGAGC......................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AAGGGCAACC------AACAGAGCGTT...................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................CATGCTCGTGTTGCTGGCTGC........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................AGCTGCAGTGGACACAGAAGT	21	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AACAGAGCGTTAACATGTCCA.........................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................ATGCCATGCTCGTGTTGCTGG............................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TGCCATGCTCGTGTTGCTG.............................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................CGTGTTGCTGGCTGCAGT.....................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GGCAACC------AACAGAGCGTT...................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................CATGTCCAGCATCAGGCCG..............................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................AGTAGCTGCAGTGGACACAGAG..	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............ACC------AACAGAGCGTTAACATGTC...........................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ATGCTCGTGTTGCTGGCT..........................	18	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................AGTAGCTGCAGTGGACAC......	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................TGCCATGCTCGTGTTGCTGGCTGCAGT.....................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................C------AACAGAGCGTTAACATGTC...........................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................AGAGCGTTAACATGTCCAGCATCA...................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................GCTCGTGTTGCTGGCTGCA.......................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TTTTCAAGGGCAACC------AACAGAGCGT....................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................ATGTCCAGCATCAGGCCGG.............................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0

droMoj3

ATTTCTTCACAGACGACCCGTCTAGGCGAATAATTGACATGGTCAAAACCAAGCTGGTAAGATGACG-----ACACCCAGAGCACGGC--TA-AATCAGAAGAGGTTGCCTTCACA-------------TAGGATTCGATCTTTACAGCTATCGCTGCTCTTGCTGCTGATTGCACTC-CCGCAAAGAATGGAGGCGA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........GACGACCCGTCTAGGCGAATAATTGAC................................................................................................................................................................	27	1	4.00	4	0	0	0	0	0	4
.......CACAGACGACCCGTCTAGGCGAAT.......................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
....................TCTAGGCGAATAATTGACATGG............................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.....................CTAGGCGAATAATTGACATGGTCAAAACC....................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	1
..........................................................................................TA-AATCAGAAGAGGTTGCCTTCACA-------------TA...................................................................	27	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................TTGCTGCTGATTGCACTC-CCGA...............	22	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................TGCACTC-CCGCAAAGAATGGA.....	21	1	1.00	1	0	0	0	0	0	1
..................CGTCTAGGCGAATAATTGACATGGTC..........................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
......................................................................................................................................TTCGATCTTTACAGCTATCGC...........................................	21	1	1.00	1	0	0	0	0	0	1

droGri2

ATGCTTTTATT---TTTC------AATCAATTTTTTTTATGGCCAGAATCACGTTGGTATAGTTTCTAAGTTTTACTGACAACAATAAATCGCATTCAAAAGTATTT-------TA-------------ATGGTTTCGTTCATTTTAGCTTACCCTGCTCGTGTTACTTGTGGCA-----------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dvi_10006

scaffold_12963:1255475-1255560 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads