dsi_99

CAAAAGTGGGGATGTGGGGAAGGATGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTGGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAACGAAGAGAGCGCAGCTTTCCATCTCACGG *********************************(((((.((((.((.(((((.((((((((((((.((((((((((...)))))...))))))))))).)))))).))))).)).)))).)))))**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR618934 Ovary	M023 head	SRR553486 Ovary	SRR553485 Ovary	SRR553488 Ovary	SRR553487 Ovary	M024 male body	M025 embryo	O002 Head	M053 Female-body	O001 Testis	GSM343915 embryo
............................................................................................TGACTAGATTTCATGCTCGTCT.................................................	22	0	1	213537.00	213537	143330	6010	10212	9290	21130	16399	1113	1558	528	2599	446	922
............................................................................................TGACTAGATTTCATGCTCGTCTA................................................	23	0	1	124656.00	124656	26457	258	31538	29532	16520	18330	45	246	92	750	74	814
............................................................................................TGACTAGATTTCATGCTCGT...................................................	20	0	1	72683.00	72683	11771	50941	108	104	94	109	6369	2220	202	248	116	401
............................................................................................TGACTAGATTTCATGCTCGTC..................................................	21	0	1	28650.00	28650	11593	6901	1178	1194	1789	2601	871	1223	418	462	204	216
..................................................GCGAACATGGATCTAGTGCACG...........................................................................................	22	0	1	18975.00	18975	5736	4336	851	1135	460	614	1652	2197	886	354	442	312
............................................................................................TGACTAGATTTCATGCTCGG...................................................	20	1	1	5654.00	5654	13	4677	0	1	0	0	706	257	0	0	0	0
.................................................................................................AGATTTCATGCTCGTCT.................................................	17	0	1	5219.00	5219	5146	0	7	4	34	28	0	0	0	0	0	0
.................................................GGCGAACATGGATCTAGTGCACG...........................................................................................	23	0	1	3584.00	3584	1039	477	159	198	2	15	183	1109	35	39	19	309
............................................................................................TGACTAGATTTCATGCTCGTCTAA...............................................	24	1	1	3382.00	3382	382	1	359	337	1280	989	1	2	0	28	0	3
..................................................GCGAACATGGATCTAGTGCAC............................................................................................	21	0	1	3248.00	3248	551	280	155	183	162	171	103	80	1049	49	458	7
............................................................................................TGACTAGATTTCATGCTC.....................................................	18	0	1	2271.00	2271	385	383	1	3	3	1	188	70	716	8	511	2
............................................................................................TGACTAGATTTCATGCTCGC...................................................	20	1	1	2251.00	2251	23	1979	0	0	0	0	193	55	0	1	0	0
............................................................................................TGACTAGATTTCATGCT......................................................	17	0	1	2137.00	2137	1986	0	24	35	67	25	0	0	0	0	0	0
...........................................................................................GTGACTAGATTTCATGCTCGTC..................................................	22	0	1	2019.00	2019	156	855	126	132	50	65	141	469	7	5	3	10
............................................................................................TGACTAGATTTCATGCTCG....................................................	19	0	1	1734.00	1734	116	427	8	8	12	8	80	15	566	27	466	1
..................................................GCGAACATGGATCTAGTGCA.............................................................................................	20	0	1	1485.00	1485	80	52	70	89	53	36	21	3	749	15	314	3
................................................................................................TAGATTTCATGCTCGTCT.................................................	18	0	1	1484.00	1484	1453	5	0	2	10	7	5	2	0	0	0	0
.................................................................................................AGATTTCATGCTCGTCTA................................................	18	0	1	1386.00	1386	1377	1	0	1	4	1	1	0	0	1	0	0
............................................................................................TGACTAGATTTCATGCTCGTCC.................................................	22	1	1	1282.00	1282	284	713	0	1	5	3	98	171	0	2	0	5
............................................................................................TGACTAGATTTCATGCTCGTCA.................................................	22	1	1	1282.00	1282	266	6	78	88	307	493	1	1	0	28	0	14
............................................................................................TGACTAGATTTCATGCTCGTCTT................................................	23	1	1	1025.00	1025	542	16	96	99	137	84	5	1	0	33	0	12
...................................................CGAACATGGATCTAGTGCACGG..........................................................................................	22	0	1	991.00	991	57	171	230	162	76	72	58	130	9	10	3	13
..................................................GCGAACATGGATCTAGTGCACGG..........................................................................................	23	0	1	982.00	982	153	83	206	212	50	56	51	74	36	10	32	19
...........................................................................................GTGACTAGATTTCATGCTCGTCT.................................................	23	0	1	898.00	898	135	259	54	47	18	27	42	252	2	10	2	50
...............................................................................................CTAGATTTCATGCTCGTCT.................................................	19	0	1	753.00	753	687	30	3	1	10	3	4	12	1	2	0	0
...................................................CGAACATGGATCTAGTGCACG...........................................................................................	21	0	1	722.00	722	23	180	55	50	33	35	59	226	18	28	14	1
............................................................................................TTACTAGATTTCATGCTCGTCT.................................................	22	1	1	688.00	688	387	62	82	69	33	25	6	10	0	14	0	0
............................................................................................TGACTAGATTTCATGCTCGTCTAAA..............................................	25	2	1	665.00	665	26	0	95	95	234	211	0	0	0	4	0	0
.................................................GGCGAACATGGATCTAGTGCA.............................................................................................	21	0	1	560.00	560	43	24	223	183	4	4	3	18	24	4	12	18
.................................................GGCGAACATGGATCTAGTGCAC............................................................................................	22	0	1	536.00	536	61	87	88	56	2	1	18	146	37	2	23	15
............................................................................................TAACTAGATTTCATGCTCGTCT.................................................	22	1	1	487.00	487	458	3	7	3	4	4	1	1	0	3	0	3
............................................................................................TTACTAGATTTCATGCTCGTCTA................................................	23	1	1	483.00	483	72	0	193	206	3	6	0	0	0	3	0	0
............................................................................................TCACTAGATTTCATGCTCGTCT.................................................	22	1	1	464.00	464	376	40	6	5	7	9	8	13	0	0	0	0
................................................................................................TAGATTTCATGCTCGTCTA................................................	19	0	1	458.00	458	455	1	0	0	1	0	0	0	0	1	0	0
...........................................................................................GTGACTAGATTTCATGCTCGT...................................................	21	0	1	438.00	438	80	67	74	79	36	39	15	36	1	2	3	6
............................................................................................TGACTAGATTTCATGCTCGTCG.................................................	22	1	1	431.00	431	155	145	3	0	3	3	42	77	0	1	0	2
.............................................................................................GACTAGATTTCATGCTCGTCT.................................................	21	0	1	364.00	364	124	5	0	3	5	9	3	2	4	207	2	0
..................................................GCGAACATGGATCTAGTGC..............................................................................................	19	0	1	348.00	348	55	14	8	24	5	6	6	2	140	9	75	4
............................................................................................TGACTAGATTTCATGCTCGTCTAT...............................................	24	0	1	307.00	307	119	0	31	24	51	47	0	0	8	8	17	2
.................................................................................................AGATTTCATGCTCGTC..................................................	16	0	1	279.00	279	274	0	0	0	3	2	0	0	0	0	0	0
..............................................................................................ACTAGATTTCATGCTCGTCT.................................................	20	0	1	274.00	274	147	10	13	9	20	12	7	14	0	38	0	4
..................................................GCGAACATGGATCTAGTG...............................................................................................	18	0	1	272.00	272	19	2	4	3	2	0	1	0	155	1	85	0
..................................................................................................GATTTCATGCTCGTCT.................................................	16	0	2	261.00	522	504	0	7	3	6	2	0	0	0	0	0	0
............................................................................................TGGCTAGATTTCATGCTCGTCT.................................................	22	1	1	256.00	256	223	4	3	6	5	3	3	0	0	3	0	6
............................................................................................CGACTAGATTTCATGCTCGTCT.................................................	22	1	1	253.00	253	202	4	4	8	14	10	1	0	0	6	0	4
............................................................................................TGACTAGACTTCATGCTCGTCT.................................................	22	1	1	248.00	248	222	9	1	3	6	1	1	0	0	3	0	2
...................................................................................................ATTTCATGCTCGTCTA................................................	16	0	1	240.00	240	239	0	0	0	1	0	0	0	0	0	0	0
...............................................................................................CTAGATTTCATGCTCGTCTA................................................	20	0	1	233.00	233	223	0	2	0	3	0	0	2	0	3	0	0
...........................................................................................GTGACTAGATTTCATGCTCGTT..................................................	22	1	1	231.00	231	7	3	66	100	16	30	4	4	0	0	0	1
..................................................................................................GATTTCATGCTCGTCTA................................................	17	0	1	229.00	229	225	0	1	1	2	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATTCTCGTCT.................................................	22	1	1	221.00	221	143	2	3	4	23	38	1	1	0	4	0	2
............................................................................................TGACTAGGTTTCATGCTCGTCT.................................................	22	1	1	217.00	217	201	3	1	3	4	1	0	2	0	0	0	2
............................................................................................TGACTAGATTTCGTGCTCGTCT.................................................	22	1	1	216.00	216	195	1	1	0	12	4	1	0	0	1	0	1
............................................................................................TGACTAGATTTCATGCTCGTTT.................................................	22	1	1	207.00	207	166	12	2	6	6	11	1	2	0	1	0	0
...................................................................................................ATTTCATGCTCGTCT.................................................	15	0	2	205.50	411	400	0	3	1	7	0	0	0	0	0	0	0
............................................................................................TGACTATATTTCATGCTCGTCT.................................................	22	1	1	202.00	202	29	88	5	8	11	16	15	27	0	3	0	0
............................................................................................TGACTAGATTCCATGCTCGTCT.................................................	22	1	1	195.00	195	171	3	2	3	7	6	1	0	0	1	0	1
............................................................................................TGACTAGATCTCATGCTCGTCT.................................................	22	1	1	179.00	179	164	2	1	1	5	2	0	0	0	1	0	3
............................................................................................TGACTAGATTTCATGCTCGTCTC................................................	23	1	1	177.00	177	105	12	8	4	14	17	1	5	0	2	0	9
............................................................................................TGACTAGATTTCATGCTCGCCT.................................................	22	1	1	174.00	174	138	6	3	1	12	6	3	2	0	3	0	0
............................................................................................TGACCAGATTTCATGCTCGTCT.................................................	22	1	1	172.00	172	144	2	4	0	11	2	0	2	0	4	0	3
............................................................................................TGACTAGATTTCATGCCCGTCT.................................................	22	1	1	163.00	163	132	5	2	2	10	8	0	1	0	3	0	0
............................................................................................TGACTAGATTTCATGCTCGTCAA................................................	23	1	1	158.00	158	48	0	8	7	40	53	0	0	0	2	0	0
............................................................................................TGACTAGATTTCATGCTTGTCT.................................................	22	1	1	157.00	157	133	0	4	3	6	7	0	0	0	1	0	3
............................................................................................TGACTAGATTTCATCCTCGTCT.................................................	22	1	1	157.00	157	113	3	3	2	16	18	0	0	0	1	0	1
............................................................................................TGACTAGATTTCATGTTCGTCT.................................................	22	1	1	156.00	156	82	8	15	15	14	15	2	1	0	4	0	0
.................................................................................................AGATTTCATGCTCGT...................................................	15	0	1	155.00	155	155	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCACGCTCGTCT.................................................	22	1	1	153.00	153	133	0	0	3	6	7	0	1	0	1	0	2
............................................................................................TGACTGGATTTCATGCTCGTCT.................................................	22	1	1	145.00	145	125	0	4	2	5	5	0	2	0	0	0	2
............................................................................................TGACTAGATTTCATGCTCGTCTG................................................	23	1	1	145.00	145	97	6	17	11	3	7	1	2	0	1	0	0
............................................................................................GGACTAGATTTCATGCTCGTCTA................................................	23	1	1	138.00	138	8	0	63	64	0	2	0	0	0	1	0	0
............................................................................................TGACTAGATTTCATACTCGTCT.................................................	22	1	1	138.00	138	115	4	2	1	7	5	0	1	0	2	0	1
............................................................................................TGACTAGATTTCATGCTCTTCT.................................................	22	1	1	132.00	132	73	7	4	6	15	13	4	0	0	6	0	4
............................................................................................TAACTAGATTTCATGCTCGTCTA................................................	23	1	1	129.00	129	83	0	16	13	9	5	0	0	0	1	0	2
............................................................................................TGACTAGATTTCATGCTCGTCTAAAA.............................................	26	2	1	127.00	127	1	0	23	17	51	35	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCATCT.................................................	22	1	1	126.00	126	97	4	1	2	10	8	0	1	0	2	0	1
............................................................................................TGACTAGATTTCATGCTCGTAT.................................................	22	1	1	125.00	125	107	1	3	5	3	2	0	0	0	1	0	3
...................................................CGAACATGGATCTAGTGCAC............................................................................................	20	0	1	122.00	122	1	21	12	13	9	6	7	19	24	2	8	0
............................................................................................TGACTAGATTTCATGCTCGTCAAA...............................................	24	2	1	122.00	122	2	0	6	8	34	69	0	0	0	3	0	0
............................................................................................TGACTAGATTTCATGCTCGAC..................................................	21	1	1	121.00	121	2	92	1	0	1	1	5	19	0	0	0	0
............................................................................................TGATTAGATTTCATGCTCGTCT.................................................	22	1	1	118.00	118	85	2	6	3	14	3	0	3	0	2	0	0
............................................................................................TGACTAGATTTCATTCTCGTCTA................................................	23	1	1	118.00	118	18	1	15	18	26	38	0	0	0	1	0	1
............................................................................................TGACTACATTTCATGCTCGTCT.................................................	22	1	1	117.00	117	9	57	1	2	12	9	2	25	0	0	0	0
................................................................................................TAGATTTCATGCTCGTC..................................................	17	0	1	113.00	113	111	0	0	0	1	1	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCCTCT.................................................	22	1	1	112.00	112	70	5	0	3	6	19	1	3	0	4	0	1
....................................................GAACATGGATCTAGTGCACG...........................................................................................	20	0	1	112.00	112	68	13	3	1	0	0	10	11	2	2	0	2
............................................................................................CGACTAGATTTCATGCTCGTCTA................................................	23	1	1	105.00	105	32	0	34	17	6	10	0	0	0	3	0	3
............................................................................................TGACTAGATTTCATGCTCT....................................................	19	1	1	105.00	105	71	20	0	1	1	1	3	5	0	3	0	0
............................................................................................TGACTAGATTTTATGCTCGTCT.................................................	22	1	1	104.00	104	70	2	1	1	12	8	0	2	0	8	0	0
............................................................................................AGACTAGATTTCATGCTCGTCT.................................................	22	1	1	100.00	100	52	3	18	15	5	2	0	0	0	4	0	1
............................................................................................TGACTAAATTTCATGCTCGTCT.................................................	22	1	1	97.00	97	86	5	1	3	2	0	0	0	0	0	0	0
.....................................................AACATGGATCTAGTGCACG...........................................................................................	19	0	1	96.00	96	88	2	0	0	0	0	3	2	1	0	0	0
..................................................GCGAACATGGATCTAGT................................................................................................	17	0	1	95.00	95	90	0	2	3	0	0	0	0	0	0	0	0
..................................................GCGAACATGGATCTAGTGCACGGT.........................................................................................	24	0	1	95.00	95	7	6	40	21	1	6	2	3	2	1	3	3
............................................................................................AGACTAGATTTCATGCTCGTCTA................................................	23	1	1	93.00	93	7	0	28	47	4	3	0	0	0	1	0	3
............................................................................................GGACTAGATTTCATGCTCGTCT.................................................	22	1	1	91.00	91	38	0	22	24	1	2	0	0	0	4	0	0
............................................................................................TGGCTAGATTTCATGCTCGTCTA................................................	23	1	1	88.00	88	51	0	18	7	3	7	0	0	0	1	0	1
..............................................................................................ACTAGATTTCATGCTCGTCTA................................................	21	0	1	86.00	86	68	0	4	1	2	4	0	1	0	3	0	3
...........................................................................................GTGACTAGATTTCATGCTCGTCC.................................................	23	1	1	85.00	85	1	46	0	0	0	0	6	31	0	0	0	1
............................................................................................TCACTAGATTTCATGCTCGTCTA................................................	23	1	1	85.00	85	56	1	14	8	2	3	0	0	0	0	0	1
............................................................................................TGACTGGATTTCATGCTCGTCTA................................................	23	1	1	84.00	84	28	0	22	16	9	7	0	0	0	2	0	0
..................................................GCGAACATGGATCTAGTGCACGT..........................................................................................	23	1	1	83.00	83	39	15	4	2	5	6	3	3	0	6	0	0
............................................................................................TGACTATATTTCATGCTCGTCTA................................................	23	1	1	83.00	83	6	7	23	16	8	14	0	9	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGTT..................................................	21	1	1	82.00	82	33	38	5	1	3	0	1	0	0	1	0	0
......................................................ACATGGATCTAGTGCACG...........................................................................................	18	0	1	78.00	78	69	3	0	0	0	0	2	4	0	0	0	0
............................................................................................TGGCTAGATTTCATGCTCGT...................................................	20	1	1	77.00	77	20	47	0	0	0	0	6	2	0	1	0	1
................................................................................................TAGATTTCATGCTCGT...................................................	16	0	1	77.00	77	77	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATTCTCGT...................................................	20	1	1	76.00	76	14	50	0	0	0	0	6	4	0	1	0	1
............................................................................................TTACTAGATTTCATGCTCGTC..................................................	21	1	1	75.00	75	35	16	9	8	1	3	1	0	0	2	0	0
.................................................GGCGAACATGGATCTAGT................................................................................................	18	0	1	74.00	74	21	0	0	0	0	0	0	0	28	0	25	0
..................................................GCGAACATGGATCTAGTGCACGA..........................................................................................	23	1	1	74.00	74	7	2	13	26	10	8	1	1	0	5	0	1
.............................................................................................GACTAGATTTCATGCTCGTCTA................................................	22	0	1	73.00	73	22	0	3	3	1	5	0	0	0	39	0	0
............................................................................................TGACTAGATTACATGCTCGTCT.................................................	22	1	1	72.00	72	34	0	5	2	30	0	0	0	0	1	0	0
.................................................GGCGAACATGGATCTAGTGC..............................................................................................	20	0	1	70.00	70	18	2	9	7	0	0	2	7	10	1	0	14
.............................................................................................TACTAGATTTCATGCTCGTCT.................................................	21	1	1	70.00	70	15	14	6	5	10	13	1	6	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGTCCA................................................	23	1	1	67.00	67	55	0	1	1	5	4	0	0	0	1	0	0
............................................................................................TGACTATATTTCATGCTCGTC..................................................	21	1	1	67.00	67	6	43	2	1	4	0	2	8	0	0	0	1
............................................................................................TGACTAGGTTTCATGCTCGTCTA................................................	23	1	1	63.00	63	41	1	5	5	4	6	0	0	0	0	0	1
............................................................................................TGACTAGATTTCATCCTCGTCTA................................................	23	1	1	62.00	62	14	1	12	9	10	16	0	0	0	0	0	0
............................................................................................CGACTAGATTTCATGCTCGT...................................................	20	1	1	62.00	62	18	34	0	1	0	0	6	3	0	0	0	0
............................................................................................TGACTAGATTCCATGCTCGTCTA................................................	23	1	1	62.00	62	31	0	11	12	3	4	0	0	0	0	0	1
............................................................................................TGACTAGATTTCATGCTCGTA..................................................	21	1	1	61.00	61	16	3	3	4	14	18	1	0	0	1	0	1
............................................................................................TAACTAGATTTCATGCTCGT...................................................	20	1	1	58.00	58	40	14	0	1	0	0	3	0	0	0	0	0
........................................................ATGGATCTAGTGCACG...........................................................................................	16	0	1	58.00	58	58	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTTGTCTA................................................	23	1	1	58.00	58	19	0	11	9	6	11	0	0	0	0	0	2
............................................................................................TGACTAGATTTCATGTTCGTCTA................................................	23	1	1	56.00	56	17	1	12	9	10	5	0	0	0	1	0	1
............................................................................................TGACCAGATTTCATGCTCGTCTA................................................	23	1	1	56.00	56	37	0	4	3	5	6	0	0	0	0	0	1
........................................................................GTGGTTCATGATTAAGTTCG.......................................................................	20	0	1	56.00	56	6	1	1	0	5	0	1	10	0	1	0	31
..................................................GCGAACATTGATCTAGTGCACG...........................................................................................	22	1	1	55.00	55	2	25	1	0	0	0	9	18	0	0	0	0
............................................................................................TTACTAGATTTCATGCTCGT...................................................	20	1	1	55.00	55	34	15	3	0	1	2	0	0	0	0	0	0
.............................................................................................GACTAGATTTCATGCTCGTC..................................................	20	0	1	54.00	54	10	2	0	0	1	0	1	0	2	36	1	1
............................................................................................TGACTAGATTTCATGCTCGTGTA................................................	23	1	1	54.00	54	4	0	18	26	2	2	0	0	0	2	0	0
............................................................................................TGACTAGATTTCATGCTCGCCTA................................................	23	1	1	53.00	53	27	0	3	4	10	8	0	0	0	1	0	0
............................................................................................TGACTAGACTTCATGCTCGTCTA................................................	23	1	1	53.00	53	33	1	5	4	5	5	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCCTCTA................................................	23	1	1	52.00	52	19	0	5	9	3	16	0	0	0	0	0	0
............................................................................................TGACTAGATTTCGTGCTCGTCTA................................................	23	1	1	52.00	52	36	0	1	3	5	5	0	0	0	0	0	2
............................................................................................TGACTACATTTCATGCTCGTC..................................................	21	1	1	52.00	52	0	41	2	0	0	2	4	3	0	0	0	0
............................................................................................TGACTAGGTTTCATGCTCGT...................................................	20	1	1	51.00	51	20	24	0	0	0	0	6	0	0	0	0	1
............................................................................................TGACTAGCTTTCATGCTCGTCT.................................................	22	1	1	51.00	51	21	0	0	0	11	14	0	0	0	3	0	2
............................................................................................TGACTTGATTTCATGCTCGTCT.................................................	22	1	1	51.00	51	33	2	2	4	6	1	1	0	0	2	0	0
............................................................................................TGACTAGATTTCATGCTCGTCTAC...............................................	24	1	1	51.00	51	23	2	1	7	10	4	0	3	0	1	0	0
............................................................................................TGACTAGATTTAATGCTCGT...................................................	20	1	1	51.00	51	2	43	0	1	0	0	4	1	0	0	0	0
............................................................................................TGACTAGATTTCATGATCGTCT.................................................	22	1	1	50.00	50	29	0	4	6	1	2	2	0	0	0	0	6
............................................................................................TGACTAGATTTCATGCTCGTGT.................................................	22	1	1	50.00	50	27	0	3	7	3	3	0	0	0	5	0	2
............................................................................................TGATTAGATTTCATGCTCGTCTA................................................	23	1	1	48.00	48	18	0	12	7	5	5	0	1	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGTCTAG...............................................	24	1	1	48.00	48	20	0	6	7	5	4	0	4	0	1	0	1
...............................................................................................CTAGATTTCATGCTCGTC..................................................	18	0	1	47.00	47	31	10	0	0	0	0	3	3	0	0	0	0
............................................................................................TGACTAGATTTCATACTCGTCTA................................................	23	1	1	46.00	46	21	1	7	5	6	5	0	0	0	0	0	1
............................................................................................TGTCTAGATTTCATGCTCGTCT.................................................	22	1	1	45.00	45	30	1	2	2	4	4	0	0	0	2	0	0
............................................................................................TGACTAGACTTCATGCTCGT...................................................	20	1	1	44.00	44	18	19	0	0	0	0	7	0	0	0	0	0
............................................................................................TGACTAGATTTTATGCTCGTCTA................................................	23	1	1	43.00	43	12	0	9	2	10	9	0	0	0	1	0	0
.............................................................................................GACTAGATTTCATGCTCGT...................................................	19	0	1	43.00	43	13	8	0	0	0	0	0	1	0	19	0	2
............................................................................................TGACTAGATTTCATGCTCGACT.................................................	22	1	1	42.00	42	35	1	2	0	3	1	0	0	0	0	0	0
...............................................................................................CTAGATTTCATGCTCGT...................................................	17	0	1	41.00	41	41	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGTATA................................................	23	1	1	41.00	41	10	0	12	14	3	1	0	0	0	0	0	1
............................................................................................TGACTAGATTTCATACTCGT...................................................	20	1	1	41.00	41	13	25	0	0	0	0	2	1	0	0	0	0
............................................................................................TGACTAGATTTCGTGCTCGT...................................................	20	1	1	41.00	41	14	22	0	0	0	2	2	1	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCTTCTA................................................	23	1	1	41.00	41	2	0	12	8	8	9	0	0	0	2	0	0
............................................................................................TGACCAGATTTCATGCTCGT...................................................	20	1	1	41.00	41	11	25	0	0	0	0	4	1	0	0	0	0
............................................................................................TGACTAGATCTCATGCTCGTCTA................................................	23	1	1	40.00	40	21	0	2	5	3	8	0	0	0	0	0	1
............................................................................................TGGCTAGATTTCATGCTCGTC..................................................	21	1	1	40.00	40	28	8	1	1	0	0	0	0	0	0	0	2
............................................................................................TGACTAGATTTCATGCCCGTCTA................................................	23	1	1	40.00	40	23	0	6	3	3	5	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCAT...................................................	20	1	1	40.00	40	16	23	0	0	0	0	0	1	0	0	0	0
............................................................................................TGACTAGATTTCATGGTCGTCTA................................................	23	1	1	39.00	39	0	0	14	18	2	4	0	0	0	0	0	1
............................................................................................TGACTAGATTTAATGCTCGTCT.................................................	22	1	1	38.00	38	9	1	3	3	14	6	0	1	0	1	0	0
...................................................CGAACATGGATCTAGTGCA.............................................................................................	19	0	1	38.00	38	2	9	2	1	0	2	1	3	12	1	5	0
............................................................................................TGACTAGATTTCATGCTCGGCT.................................................	22	1	1	38.00	38	23	2	0	0	2	1	0	1	0	4	0	5
............................................................................................TGACTAGACTTCATGCTCGTC..................................................	21	1	1	37.00	37	20	14	1	0	0	0	1	1	0	0	0	0
............................................................................................TGACTAGATTGCATGCTCGTCTA................................................	23	1	1	37.00	37	1	0	18	17	0	0	0	0	0	0	0	1
............................................................................................TAACTAGATTTCATGCTCGTC..................................................	21	1	1	37.00	37	28	4	1	0	0	2	0	2	0	0	0	0
............................................................................................TGACTAGATTTCACGCTCGT...................................................	20	1	1	36.00	36	11	22	0	0	0	0	2	1	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGCC..................................................	21	1	1	36.00	36	23	10	0	0	1	1	0	1	0	0	0	0
............................................................................................TGACTAGATTCCATGCTCGT...................................................	20	1	1	36.00	36	16	17	0	0	0	0	2	1	0	0	0	0
..................................................GCTAACATGGATCTAGTGCACG...........................................................................................	22	1	1	36.00	36	5	9	5	4	1	0	4	4	0	4	0	0
............................................................................................TCACTAGATTTCATGCTCGTC..................................................	21	1	1	36.00	36	28	3	1	1	0	1	2	0	0	0	0	0
............................................................................................TGAGTAGATTTCATGCTCGTCTA................................................	23	1	1	35.00	35	3	0	11	16	2	3	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGTCTAAAAA............................................	27	2	1	35.00	35	0	0	7	7	14	7	0	0	0	0	0	0
............................................................................................TGACTGGATTTCATGCTCGT...................................................	20	1	1	35.00	35	13	18	0	0	0	0	2	2	0	0	0	0
..................................................GGGAACATGGATCTAGTGCACG...........................................................................................	22	1	1	34.00	34	31	1	0	0	0	0	0	0	0	1	0	1
............................................................................................TCACTAGATTTCATGCTCGT...................................................	20	1	1	34.00	34	27	5	0	0	0	0	2	0	0	0	0	0
............................................................................................TGACTAGATTTCATGGTCGTCT.................................................	22	1	1	34.00	34	10	1	6	8	4	5	0	0	0	0	0	0
............................................................................................CGACTAGATTTCATGCTCGTC..................................................	21	1	1	34.00	34	23	4	0	2	1	2	0	1	0	1	0	0
............................................................................................TGACTAGATTTTATGCTCGT...................................................	20	1	1	34.00	34	3	27	0	0	0	0	4	0	0	0	0	0
............................................................................................TGACTAGATTACATGCTCGTCTA................................................	23	1	1	33.00	33	5	0	13	12	2	1	0	0	0	0	0	0
.................................................................................................AGATTTCATGCTCGTCTAA...............................................	19	1	1	33.00	33	29	1	0	0	2	1	0	0	0	0	0	0
............................................................................................TGAATAGATTTCATGCTCGTCT.................................................	22	1	1	33.00	33	20	0	0	1	2	1	0	0	0	8	0	1
............................................................................................TGACTAGATTTCATGCTCGA...................................................	20	1	1	33.00	33	19	8	1	1	0	0	3	1	0	0	0	0
..................................................GCGAACATGGATCTAGTGCACA...........................................................................................	22	1	1	33.00	33	16	5	0	1	2	4	3	2	0	0	0	0
..................................................GCGAACATGGATCTAGTGCACT...........................................................................................	22	1	1	33.00	33	6	11	3	1	1	0	6	5	0	0	0	0
................................................CGGCGAACATGGATCTAGTGCACG...........................................................................................	24	0	1	32.00	32	4	4	6	2	0	0	2	8	0	1	0	5
............................................................................................TGACTAGATTTCATGCCCGT...................................................	20	1	1	32.00	32	11	15	0	0	0	1	5	0	0	0	0	0
............................................................................................TGACTAGATATCATGCTCGTCTA................................................	23	1	1	32.00	32	6	0	12	12	0	2	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGATCGTCTA................................................	23	1	1	31.00	31	3	0	8	9	7	3	0	0	0	0	0	1
............................................................................................TGACTAGATGTCATGCTCGTCTA................................................	23	1	1	31.00	31	0	0	14	14	1	1	0	0	0	1	0	0
............................................................................................TGACTAGATTTCATGCTCGTCGA................................................	23	1	1	31.00	31	29	0	0	1	0	0	0	0	0	0	0	1
..................................................GCGAACATCGATCTAGTGCACG...........................................................................................	22	1	1	31.00	31	3	16	0	0	1	1	3	7	0	0	0	0
............................................................................................TGACTAGATTTCACGCTCGTCTA................................................	23	1	1	30.00	30	16	0	2	5	5	2	0	0	0	0	0	0
..................................................GCGAACATGGATCTAGTTCACG...........................................................................................	22	1	1	29.00	29	1	13	0	0	0	2	6	7	0	0	0	0
............................................................................................TGACTAGCTTTCATGCTCGT...................................................	20	1	1	29.00	29	2	19	0	0	0	0	5	1	0	0	0	2
............................................................................................TGAGTAGATTTCATGCTCGTCT.................................................	22	1	1	29.00	29	15	1	7	3	1	0	0	0	0	1	0	1
............................................................................................TGACTAGATTTGATGCTCGTCT.................................................	22	1	1	29.00	29	21	1	5	1	0	1	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGTTTA................................................	23	1	1	28.00	28	12	0	8	2	3	2	0	0	0	1	0	0
............................................................................................TGACTAGATTTCATGTTCGT...................................................	20	1	1	28.00	28	9	13	0	0	0	3	1	1	0	1	0	0
............................................................................................TGACTAGATTTCATGCTCGGCTA................................................	23	1	1	28.00	28	7	0	9	9	0	0	0	0	0	2	0	1
............................................................................................TGACTAGATTTCATGCTCATCTA................................................	23	1	1	28.00	28	6	0	1	5	4	10	0	0	0	0	0	2
..................................................GCGAACATGGATCTAGTCCACG...........................................................................................	22	1	1	28.00	28	1	13	3	1	0	1	4	5	0	0	0	0
..................................................TCGAACATGGATCTAGTGCACG...........................................................................................	22	1	1	28.00	28	1	6	7	7	1	0	0	6	0	0	0	0
............................................................................................TGACTAGATTTCATGCTAGTCT.................................................	22	1	1	27.00	27	9	0	5	1	2	1	1	0	0	7	0	1
..................................................GCGAACATGGATCTAGTGCACGGA.........................................................................................	24	1	1	27.00	27	1	2	12	4	0	6	1	1	0	0	0	0
............................................................................................TGACTAGATTTAATGCTCGTCTA................................................	23	1	1	27.00	27	4	0	7	8	3	5	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTAGTCTA................................................	23	1	1	27.00	27	4	0	7	8	3	3	0	0	0	2	0	0
...........................................................................................GTGACTAGATTTCATGCTCGTCTA................................................	24	0	1	26.00	26	11	2	1	2	3	1	1	4	0	1	0	0
............................................................................................TGACTACATTTCATGCTCGTCTA................................................	23	1	1	26.00	26	3	7	1	7	2	3	0	3	0	0	0	0
...........................................................................................CTGACTAGATTTCATGCTCGTCT.................................................	23	1	1	26.00	26	20	0	1	1	0	0	0	0	0	3	0	1
............................................................................................TGACTAGCTTTCATGCTCGTCTA................................................	23	1	1	26.00	26	2	0	2	3	10	6	1	0	0	0	0	2
.................................................GGCGAACATGGATCTAGTGCACGA..........................................................................................	24	1	1	26.00	26	2	0	11	9	1	0	0	3	0	0	0	0
...........................................................................................GTGACTAGATTTCATGCTCGTCAA................................................	24	1	1	25.00	25	1	0	3	4	6	11	0	0	0	0	0	0
............................................................................................TGACTAGAATTCATGCTCGTCT.................................................	22	1	1	25.00	25	13	0	3	2	6	0	0	0	0	1	0	0
............................................................................................TGACTAGAATTCATGCTCGTCTA................................................	23	1	1	25.00	25	2	0	9	7	2	2	0	0	0	1	0	2
............................................................................................TGACTAGATTTCATTCTCGTC..................................................	21	1	1	24.00	24	9	7	0	0	1	6	1	0	0	0	0	0
............................................................................................TGACTAGATCTCATGCTCGTC..................................................	21	1	1	24.00	24	18	4	0	1	0	0	0	1	0	0	0	0
............................................................................................TGACTAGATATCATGCTCGTCT.................................................	22	1	1	24.00	24	14	1	4	2	1	1	0	1	0	0	0	0
............................................................................................TGACTAGATTTCATGCTTGT...................................................	20	1	1	24.00	24	5	12	0	0	0	0	3	2	0	1	0	1
........................................................................................TTCGTGACTAGATTTCATGCTCGTCT.................................................	26	0	1	24.00	24	2	15	2	1	0	0	4	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTGGTCTA................................................	23	1	1	24.00	24	2	0	11	9	1	1	0	0	0	0	0	0
............................................................................................TGACTAGATTTGATGCTCGTCTA................................................	23	1	1	23.00	23	1	0	7	11	3	1	0	0	0	0	0	0
..............................................................................................ACTAGATTTCATGCTCGT...................................................	18	0	1	23.00	23	8	4	0	0	1	0	6	1	0	2	1	0
............................................................................................TGATTAGATTTCATGCTCGT...................................................	20	1	1	23.00	23	8	12	0	0	0	0	0	1	0	0	0	2
............................................................................................TGACTAGATTTGATGCTCGT...................................................	20	1	1	23.00	23	2	19	0	0	0	0	1	1	0	0	0	0
............................................................................................TGACTAGATCTCATGCTCGT...................................................	20	1	1	23.00	23	13	8	0	0	0	0	1	0	0	0	0	1
............................................................................................TGACTAGATTTCTTGCTCGTCT.................................................	22	1	1	23.00	23	18	0	1	1	2	1	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGGC..................................................	21	1	1	23.00	23	8	8	1	0	0	0	0	3	0	3	0	0
....................................................................................................TTTCATGCTCGTCTA................................................	15	0	2	23.00	46	43	0	0	1	2	0	0	0	0	0	0	0
....................................................GAACATGGATCTAGTGCAC............................................................................................	19	0	1	23.00	23	13	0	2	1	0	3	2	0	1	0	1	0
..................................................GCGAACATGGATCTAGTGCATG...........................................................................................	22	1	1	22.00	22	12	5	1	1	0	0	2	1	0	0	0	0
............................................................................................TGACTAGTTTTCATGCTCGTCT.................................................	22	1	1	22.00	22	14	0	1	1	3	1	0	0	0	0	0	2
............................................................................................AGACTAGATTTCATGCTCGT...................................................	20	1	1	22.00	22	7	10	0	0	1	0	2	1	0	0	0	1
............................................................................................TGACTAAATTTCATGCTCGTCTA................................................	23	1	1	22.00	22	12	1	3	1	3	0	0	1	0	1	0	0
............................................................................................TGACTAGATTTCATGCTGGTCT.................................................	22	1	1	22.00	22	7	1	0	6	5	3	0	0	0	0	0	0
...................................................CGAACATGGATCTAGTGCACGGT.........................................................................................	23	0	1	22.00	22	0	1	4	10	1	2	1	3	0	0	0	0
.................................................GGCGAACATGGATCTAGTGCACGT..........................................................................................	24	1	1	21.00	21	13	3	1	0	1	1	0	1	0	1	0	0
............................................................................................TGACTAGATTTCATGCTCATC..................................................	21	1	1	21.00	21	15	2	1	0	2	0	0	0	0	1	0	0
............................................................................................TGACTAGATTTCATGCTCGTCTACA..............................................	25	2	1	21.00	21	0	0	4	4	4	7	0	0	0	2	0	0
............................................................................................TGACTATATTTCATGCTCGTCC.................................................	22	2	1	20.00	20	0	15	0	0	0	0	1	4	0	0	0	0
...........................................................................................GTGACTAGATTTCATGCTCGTCG.................................................	23	1	1	20.00	20	0	8	0	0	0	0	2	10	0	0	0	0
............................................................................................TGACTAGATTTCGTGCTCGTC..................................................	21	1	1	20.00	20	15	2	1	0	0	1	0	0	0	0	0	1
............................................................................................TGACTAGATTTCATGCTCCT...................................................	20	1	1	20.00	20	10	8	0	0	0	0	0	1	0	1	0	0
............................................................................................TGACTAGGTTTCATGCTCGTC..................................................	21	1	1	20.00	20	17	0	0	0	1	0	1	0	0	1	0	0
............................................................................................TGACTAGATTTCATGCACGTCT.................................................	22	1	1	20.00	20	18	1	0	0	1	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCTT...................................................	20	1	1	20.00	20	7	7	0	0	0	1	2	0	0	2	0	1
...................................................CGAACATGGATCTAGTGCACGT..........................................................................................	22	1	1	19.00	19	0	0	2	0	6	6	0	5	0	0	0	0
...........................................................................................CTGACTAGATTTCATGCTCGT...................................................	21	1	1	19.00	19	4	14	0	0	0	0	1	0	0	0	0	0
..............................................................................................ACTAGATTTCATGCTCGTC..................................................	19	0	1	19.00	19	8	8	0	0	0	0	0	0	0	2	0	1
..................................................GCGAACATGGATCTAGTGCAA............................................................................................	21	1	1	19.00	19	3	0	2	2	6	6	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATCCTCGT...................................................	20	1	1	19.00	19	5	12	0	0	0	0	1	0	0	0	0	1
............................................................................................TGACTAGAGTTCATGCTCGTCT.................................................	22	1	1	19.00	19	7	1	4	4	0	0	0	1	0	0	0	2
............................................................................................TGACTAGATTTCATCCTCGTC..................................................	21	1	1	19.00	19	11	3	1	1	1	0	0	1	0	1	0	0
...........................................................................................GTGACTAGATTTCATGCTCGG...................................................	21	1	1	19.00	19	2	9	0	0	0	0	1	7	0	0	0	0
..................................................GTGAACATGGATCTAGTGCACG...........................................................................................	22	1	1	19.00	19	17	0	0	0	1	0	1	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTTGTC..................................................	21	1	1	18.00	18	13	2	0	0	1	1	0	0	0	1	0	0
...........................................................................................GTGACTAGATTTCATGCTC.....................................................	19	0	1	18.00	18	2	0	0	0	0	0	0	0	11	0	5	0
............................................................................................TGACTAGATTTCAGGCTCGTCT.................................................	22	1	1	18.00	18	13	0	0	1	0	0	0	1	0	2	0	1
..................................................GCGAACATGGGTCTAGTGCACG...........................................................................................	22	1	1	18.00	18	13	4	0	0	0	0	1	0	0	0	0	0
..................................................GAGAACATGGATCTAGTGCACG...........................................................................................	22	1	1	18.00	18	17	1	0	0	0	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTAGT...................................................	20	1	1	18.00	18	5	11	0	0	0	0	1	0	0	0	0	1
............................................................................................TGACTAGATTTCCTGCTCGTCT.................................................	22	1	1	18.00	18	9	1	0	0	2	1	0	0	0	1	0	4
............................................................................................TGTCTAGATTTCATGCTCGTCTA................................................	23	1	1	17.00	17	7	0	6	1	3	0	0	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCCCGTC..................................................	21	1	1	17.00	17	12	3	0	0	0	2	0	0	0	0	0	0
............................................................................................TGACCAGATTTCATGCTCGTC..................................................	21	1	1	17.00	17	11	1	0	0	1	1	1	1	0	1	0	0
....................................................GAACATGGATCTAGTGCACGG..........................................................................................	21	0	1	17.00	17	0	1	7	2	0	1	0	3	0	3	0	0
............................................................................................TGACTAGATTTCATACTCGTC..................................................	21	1	1	17.00	17	6	5	1	0	0	1	0	2	0	1	0	1
..................................................GCGAGCATGGATCTAGTGCACG...........................................................................................	22	1	1	17.00	17	10	3	1	0	0	1	0	1	0	0	0	1
............................................................................................TGACTGGATTTCATGCTCGTC..................................................	21	1	1	17.00	17	12	1	0	0	2	1	0	1	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCTCT..................................................	21	3	3	16.67	50	25	4	2	0	4	12	0	1	0	2	0	0
............................................................................................TGACTAGATGTCATGCTCGTCT.................................................	22	1	1	16.00	16	6	0	6	4	0	0	0	0	0	0	0	0
.................................................GGCGAACATTGATCTAGTGCACG...........................................................................................	23	1	1	16.00	16	0	4	0	0	0	0	2	10	0	0	0	0
..................................................GCGAACATGGATCTAGTGCGCG...........................................................................................	22	1	1	16.00	16	12	3	0	0	0	0	1	0	0	0	0	0
............................................................................................TGACTAGATTTCATGCTCGTCTATA..............................................	25	1	1	16.00	16	0	0	4	1	4	6	0	0	0	1	0	0
............................................................................................TGACTAGATTTCATGCTCGTAAA................................................	23	2	1	16.00	16	0	1	1	0	6	8	0	0	0	0	0	0
................................................CGGCGAACATGGATCTAGTGCAC............................................................................................	23	0	1	16.00	16	1	5	5	3	0	0	0	2	0	0	0	0
...........................................................................................GTGACTAGATTTCATGCTCGAC..................................................	22	1	1	16.00	16	0	10	0	0	0	0	1	5	0	0	0	0
...................................................CGAACATGGATCTAGTGCACGGA.........................................................................................	23	1	1	16.00	16	1	4	2	1	0	2	1	4	0	0	0	1
............................................................................................TGATTAGATTTCATGCTCGTC..................................................	21	1	1	16.00	16	10	3	0	2	0	0	0	0	0	1	0	0
............................................................................................TGACTAGATTTCATGCTCGTTA.................................................	22	2	1	16.00	16	4	2	3	2	2	3	0	0	0	0	0	0
............................................................................................TGACTAGATTTTATGCTCGTC..................................................	21	1	1	15.00	15	5	4	0	0	2	0	0	0	0	4	0	0
............................................................................................TGACAAGATTTCATGCTCGTCT.................................................	22	1	1	15.00	15	11	0	0	0	2	2	0	0	0	0	0	0
............................................................................................TGACTAGTTTTCATGCTCGT...................................................	20	1	1	15.00	15	2	11	0	0	0	0	0	1	0	0	0	1
...................................................................................................ATTTCATGCTCGTCTAA...............................................	17	1	1	15.00	15	15	0	0	0	0	0	0	0	0	0	0	0
.......................................................CATGGATCTAGTGCACG...........................................................................................	17	0	1	15.00	15	15	0	0	0	0	0	0	0	0	0	0	0
.................................................GGCGAACATGGATCTAGTGCACT...........................................................................................	23	1	1	14.00	14	0	2	1	3	0	0	0	7	0	0	0	1
............................................................................................TGACTAGATTTCATGCTCGACTA................................................	23	1	1	14.00	14	3	0	2	6	1	2	0	0	0	0	0	0
...........................................................................................GTGACTAGATTTCATGCTCGTTT.................................................	23	1	1	14.00	14	0	2	3	5	1	2	0	1	0	0	0	0
............................................................................................TGACTAGATTTCATGTTCGTC..................................................	21	1	1	14.00	14	8	1	0	0	1	2	0	1	0	1	0	0
...........................................................................................ATGACTAGATTTCATGCTCGTCT.................................................	23	1	1	14.00	14	10	0	0	0	2	0	0	0	0	2	0	0
.................................................GGCTAACATGGATCTAGTGCACG...........................................................................................	23	1	1	14.00	14	2	3	0	1	0	0	0	8	0	0	0	0
..................................................GCGAACATGGATCTAGTGTACG...........................................................................................	22	1	1	14.00	14	3	1	4	1	0	2	2	1	0	0	0	0
............................................................................................TGCCTAGATTTCATGCTCGTCT.................................................	22	1	1	14.00	14	7	1	0	1	2	2	0	0	0	0	0	1
............................................................................................TGAATAGATTTCATGCTCGTCTA................................................	23	1	1	14.00	14	3	0	2	4	1	1	0	0	0	2	0	1
............................................................................................TGACTTGATTTCATGCTCGTCTA................................................	23	1	1	14.00	14	3	0	5	3	2	1	0	0	0	0	0	0
...........................................................................................GTGACTAGATTTCATGCTCG....................................................	20	0	1	14.00	14	3	1	0	0	0	1	0	0	5	1	3	0
..................................................................................................GATTTCATGCTCGTC..................................................	15	0	2	13.50	27	26	0	0	0	0	1	0	0	0	0	0	0

CCGTGAGATGGAAAGCTGCGCTCTCTTCGTTGTGCTGACCCAACTTAATAGACGAGCATGAAATCTAGTCACGAACTTAATCATGAACCACCGTGCACTAGATCCATGTTCGCCGACAAAATAGAGTCAGAAAAGAGCATCCTTCCCCACATCCCCACTTTTG **********************************(((((.((((.((.(((((.((((((.(((((((((((...(((((...)))))))))).)))))))))))).))))).)).)))).)))))*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head
...........................................................GAAGTCGAGTCACGAACTT.....................................................................................	19	2	1	1.00	1	0
...TGAGATGGAAAGCTGCGCTCT...........................................................................................................................................	21	0	1	1.00	1	1
.......................................................GCATAAAATCTAGTCA............................................................................................	16	1	6	0.17	1	0
................TGGGCTCTCTTCGTT....................................................................................................................................	15	1	11	0.09	1	0
.............................................................................................................................GTCAGAAAAGAGCAA.......................	15	1	20	0.05	1	0
.......................................CCAACTTACTCGACGAGGA.........................................................................................................	19	3	20	0.05	1	0

Species	Coordinate	ID	Alignment
droSim3	3R:24713770-24713932 +	dsi_99	CAAAAGT-GGGGA------TGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AGCGCAG--CTTTCCAT--------------C--TCA-CGG
droSec2	scaffold_4:3905667-3905828 +	dse_174	CAAAAGT-GGGGA------TGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AGCGGAG--C-TTCCAT--------------C--TCA-CGG
dm3	chr3R:25042874-25043036 +	dme-mir-996	CAATAGT-GGGGA------TGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AGCGGAG--CTTTCCAT--------------C--TCG-CGG
droEre2	scaffold_4820:2987397-2987554 -	der_12	CCACAGC-GGAGA------AGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACT----ACGAA----------GAG------AG-------CTTTCCAT--------------C--TCG-CGG
droYak3	3R:21454400-21454561 -	dya_9	CCAAATGTGGG---GGGGATGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACT----ACGAA----------GAG------AG-------CTTTCCAT--------------C--TCG-CGG
droEug1	scf7180000409787:530936-531091 -		AA----T-GGGGAA-----GGAAAGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------CTTTTCTC--------------C--CCG-AGG
droBia1	scf7180000302136:3095553-3095708 -		GGA---T-GCGGA------TGCGGATG------------C---G------GA---------------------------------------------------------------------GGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGCTCATGGTGAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----GCGAA----------GAG------AG-------TTTTCCCT--------------G--CCGAGGG
droTak1	scf7180000415310:303381-303544 +		AAAAG--------------------GAAGGAGGATGTGGATGTGGATGTGGA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTCC-------------------TCG-AGG
droEle1	scf7180000491280:1230572-1230724 +		CTAAAAA-GAAAA------AGCTGGTA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTCC---------------------C-CGG
droRho1	scf7180000779659:58342-58486 -		AAAAAG--------------CTGGGGA------------G---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTCC-----------------------CCG
droFic1	scf7180000453776:339210-339364 +		AAAAAAA--AGAA------GCTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTTC-------------------TCG-GGG
droKik1	scf7180000302466:430718-430885 -		AG---CT-GGAGA------TC-GGGGC------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACAGAACCACAAGAAGAG------AG-------TTT-CCTT--AGCC--------C--TAA-CCC
droAna3	scaffold_13340:14198911-14199086 -	dan_123	G--------------------TGGAAA------------A---GGATTTGGG----------------------------------------------------------------------GTCTTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----CCAAA----------GAGTCGGATAGTGGAGAGT---CAACTAACTCCCATCCCTGCCCCA-AAA
droBip1	scf7180000395971:964860-964996 +		AG-----------------------AA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----CCAAA----------GAG------AG-------T---CCA-------------------CA-CAG
dp5	2:1883587-1883756 +	dps_3	AGAGCCT-GGG---TCTGATCCGGCAG------------C---G------TT---------------------------------------------------------------------TGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACA----ACGAA-CCGAAAGA-----------GCAGAG--CAACGCAG--------------T--TGT-CGA
droPer2	scaffold_7:2047000-2047169 +	dpe_11	AGAGCCT-GGG---TCTGATCCGGCAG------------C---G------TT---------------------------------------------------------------------TGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACA----ACGAA-CCGAAAGA-----------GCAGAG--CAACGCAG--------------T--TGT-CGA
droWil2	scf2_1100000004921:1735960-1736125 +	dwi_122	TGTGTGT-GTGGA------TGGATGGA---------TGGA---T-----GGA-GTCCT-TTCTA---------------------------------------------TGTGGCAGC---GTCTCT----TGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTTTGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----AC-AA----------GAG--------CGCAG--C-------------------------------
droVir3	scaffold_12822:2333329-2333515 +	dvi_138	TCAGCTT-GGCGAG--AG-AAAGGGAG------------A---G------GC----------TGCAGCTGCTGCCTGATTTTTGATTTTTTTTTTTTTTTTGTTTCGCT--------CTTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACA---------------------------------------------------------------------
droMoj3	scaffold_6540:26449214-26449420 +	dmo_146	ACCAAGT-GAGAA------GGAGAGAG------------A---G------GGAGGTCTCTACTGCAGCTGCTGCCTGATATT-----TCTTTT-------------------------TTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAATACACACAGCGAA----------AAC----ATGGCCAAGAGA---CCAT--------------T--ACA-AAG
droGri2	scaffold_14624:3251567-3251705 +	dgr_2	-------------------------------------------------------------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACAACACAAAAAAAAAAGAGGAG------AGCAAAG--C-------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim3

CAAAAGT-GGGGA------TGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AGCGCAG--CTTTCCAT--------------C--TCA-CGG	Size	Hit Count	Total Norm	Total	V044 Embryo	M023 Head	M024 Male-body	M025 Embryo	O001 Testis	O002 Head	M053 Female-body	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	213537.00	213537	922	6010	1113	1558	446	528	2599	9290	10212	16399	21130	143330
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	124656.00	124656	814	258	45	246	74	92	750	29532	31538	18330	16520	26457
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	72683.00	72683	401	50941	6369	2220	116	202	248	104	108	109	94	11771
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	28650.00	28650	216	6901	871	1223	204	418	462	1194	1178	2601	1789	11593
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	18975.00	18975	312	4336	1652	2197	442	886	354	1135	851	614	460	5736
...................................................................................................................................................................................................AGATTTCATGCTCGTCT........................................................................................	17	1	5219.00	5219	0	0	0	0	0	0	0	4	7	28	34	5146
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	3584.00	3584	309	477	183	1109	19	35	39	198	159	15	2	1039
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	3248.00	3248	7	280	103	80	458	1049	49	183	155	171	162	551
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	2271.00	2271	2	383	188	70	511	716	8	3	1	1	3	385
..............................................................................................................................................................................................TGACTAGATTTCATGCT.............................................................................................	17	1	2137.00	2137	0	0	0	0	0	0	0	35	24	25	67	1986
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	2019.00	2019	10	855	141	469	3	7	5	132	126	65	50	156
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	1734.00	1734	1	427	80	15	466	566	27	8	8	8	12	116
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	1485.00	1485	3	52	21	3	314	749	15	89	70	36	53	80
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	1484.00	1484	0	5	5	2	0	0	0	2	0	7	10	1453
...................................................................................................................................................................................................AGATTTCATGCTCGTCTA.......................................................................................	18	1	1386.00	1386	0	1	1	0	0	0	1	1	0	1	4	1377
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	991.00	991	13	171	58	130	3	9	10	162	230	72	76	57
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	982.00	982	19	83	51	74	32	36	10	212	206	56	50	153
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	898.00	898	50	259	42	252	2	2	10	47	54	27	18	135
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	753.00	753	0	30	4	12	0	1	2	1	3	3	10	687
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	722.00	722	1	180	59	226	14	18	28	50	55	35	33	23
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	560.00	560	18	24	3	18	12	24	4	183	223	4	4	43
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	536.00	536	15	87	18	146	23	37	2	56	88	1	2	61
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTA.......................................................................................	19	1	458.00	458	0	1	0	0	0	0	1	0	0	0	1	455
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	438.00	438	6	67	15	36	3	1	2	79	74	39	36	80
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	364.00	364	0	5	3	2	2	4	207	3	0	9	5	124
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	348.00	348	4	14	6	2	75	140	9	24	8	6	5	55
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	307.00	307	2	0	0	0	17	8	8	24	31	47	51	119
...................................................................................................................................................................................................AGATTTCATGCTCGTC.........................................................................................	16	1	279.00	279	0	0	0	0	0	0	0	0	0	2	3	274
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	274.00	274	4	10	7	14	0	0	38	9	13	12	20	147
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	272.00	272	0	2	1	0	85	155	1	3	4	0	2	19
....................................................................................................................................................................................................GATTTCATGCTCGTCT........................................................................................	16	2	261.00	522	0	0	0	0	0	0	0	3	7	2	6	504
.....................................................................................................................................................................................................ATTTCATGCTCGTCTA.......................................................................................	16	1	240.00	240	0	0	0	0	0	0	0	0	0	0	1	239
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA.......................................................................................	20	1	233.00	233	0	0	0	2	0	0	3	0	2	0	3	223
....................................................................................................................................................................................................GATTTCATGCTCGTCTA.......................................................................................	17	1	229.00	229	0	0	0	0	0	0	0	1	1	0	2	225
.....................................................................................................................................................................................................ATTTCATGCTCGTCT........................................................................................	15	2	205.50	411	0	0	0	0	0	0	0	1	3	0	7	400
...................................................................................................................................................................................................AGATTTCATGCTCGT..........................................................................................	15	1	155.00	155	0	0	0	0	0	0	0	0	0	0	0	155
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	122.00	122	0	21	7	19	8	24	2	13	12	6	9	1
..................................................................................................................................................................................................TAGATTTCATGCTCGTC.........................................................................................	17	1	113.00	113	0	0	0	0	0	0	0	0	0	1	1	111
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	112.00	112	2	13	10	11	0	2	2	1	3	0	0	68
......................................................................................................................................................AACATGGATCTAGTGCACG...................................................................................................................................	19	1	96.00	96	0	2	3	2	0	1	0	0	0	0	0	88
...................................................................................................................................................GCGAACATGGATCTAGT........................................................................................................................................	17	1	95.00	95	0	0	0	0	0	0	0	3	2	0	0	90
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	95.00	95	3	6	2	3	3	2	1	21	40	6	1	7
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	86.00	86	3	0	0	1	0	0	3	1	4	4	2	68
.......................................................................................................................................................ACATGGATCTAGTGCACG...................................................................................................................................	18	1	78.00	78	0	3	2	4	0	0	0	0	0	0	0	69
..................................................................................................................................................................................................TAGATTTCATGCTCGT..........................................................................................	16	1	77.00	77	0	0	0	0	0	0	0	0	0	0	0	77
..................................................................................................................................................GGCGAACATGGATCTAGT........................................................................................................................................	18	1	74.00	74	0	0	0	0	25	28	0	0	0	0	0	21
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	73.00	73	0	0	0	0	0	0	39	3	3	5	1	22
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	70.00	70	14	2	2	7	0	10	1	7	9	0	0	18
.........................................................................................................................................................ATGGATCTAGTGCACG...................................................................................................................................	16	1	58.00	58	0	0	0	0	0	0	0	0	0	0	0	58
.........................................................................................................................................................................GT-GGTTCATGATTAAGTTCG..............................................................................................................	20	1	56.00	56	31	1	1	10	0	0	1	0	1	0	5	6
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	54.00	54	1	2	1	0	1	2	36	0	0	0	1	10
.................................................................................................................................................................................................CTAGATTTCATGCTCGTC.........................................................................................	18	1	47.00	47	0	10	3	3	0	0	0	0	0	0	0	31
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	43.00	43	2	8	0	1	0	0	19	0	0	0	0	13
.................................................................................................................................................................................................CTAGATTTCATGCTCGT..........................................................................................	17	1	41.00	41	0	0	0	0	0	0	0	0	0	0	0	41
....................................................................................................................................................CGAACATGGATCTAGTGCA.....................................................................................................................................	19	1	38.00	38	0	9	1	3	5	12	1	1	2	2	0	2
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	32.00	32	5	4	2	8	0	0	1	2	6	0	0	4
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA.......................................................................................	24	1	26.00	26	0	2	1	4	0	0	1	2	1	1	3	11
..........................................................................................................................................................................................TTCGTGACTAGATTTCATGCTCGTCT........................................................................................	26	1	24.00	24	0	15	4	0	0	0	0	1	2	0	0	2
................................................................................................................................................................................................ACTAGATTTCATGCTCGT..........................................................................................	18	1	23.00	23	0	4	6	1	1	0	2	0	0	0	1	8
......................................................................................................................................................................................................TTTCATGCTCGTCTA.......................................................................................	15	2	23.00	46	0	0	0	0	0	0	0	1	0	0	2	43
.....................................................................................................................................................GAACATGGATCTAGTGCAC....................................................................................................................................	19	1	23.00	23	0	0	2	0	1	1	0	1	2	3	0	13
....................................................................................................................................................CGAACATGGATCTAGTGCACGGT-................................................................................................................................	23	1	22.00	22	0	1	1	3	0	0	0	10	4	2	1	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	19.00	19	1	8	0	0	0	0	2	0	0	0	0	8
.............................................................................................................................................................................................GTGACTAGATTTCATGCTC............................................................................................	19	1	18.00	18	0	0	0	0	5	11	0	0	0	0	0	2
.....................................................................................................................................................GAACATGGATCTAGTGCACGG..................................................................................................................................	21	1	17.00	17	0	1	0	3	0	0	3	2	7	1	0	0
.................................................................................................................................................CGGCGAACATGGATCTAGTGCAC....................................................................................................................................	23	1	16.00	16	0	5	0	2	0	0	0	3	5	0	0	1
........................................................................................................................................................CATGGATCTAGTGCACG...................................................................................................................................	17	1	15.00	15	0	0	0	0	0	0	0	0	0	0	0	15
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCG...........................................................................................	20	1	14.00	14	0	1	0	0	3	5	1	0	0	1	0	3
....................................................................................................................................................................................................GATTTCATGCTCGTC.........................................................................................	15	2	13.50	27	0	0	0	0	0	0	0	0	0	1	0	26

droSec2

CAAAAGT-GGGGA------TGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AGCGGAG--C-TTCCAT--------------C--TCA-CGG	Size	Hit Count	Total Norm	Total	V113 Male-body	V114 Embryo	V115 Head	M054 Female-body
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	34073.00	34073	3215	10270	8640	11948
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	18514.00	18514	6027	1038	10356	1093
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	13148.00	13148	5078	830	4755	2485
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	10282.00	10282	495	4476	2093	3218
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	6391.00	6391	1296	880	2112	2103
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	2074.00	2074	418	824	392	440
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	833.00	833	1	2	4	826
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	783.00	783	302	33	162	286
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	554.00	554	177	33	15	329
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	506.00	506	21	32	109	344
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	308.00	308	95	27	64	122
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	273.00	273	75	77	52	69
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	249.00	249	25	18	8	198
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	227.00	227	21	115	58	33
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	222.00	222	59	45	37	81
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	202.00	202	0	3	1	198
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	145.00	145	1	0	1	143
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	143.00	143	6	10	106	21
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	121.00	121	17	46	35	23
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	113.00	113	15	32	15	51
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	102.00	102	34	16	39	13
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	101.00	101	12	41	18	30
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	87.00	87	0	21	6	60
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	78.00	78	0	1	7	70
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	78.00	78	35	6	2	35
.........................................................................................................................................................................GT-GGTTCATGATTAAGTTCG..............................................................................................................	20	1	73.00	73	4	58	7	4
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	56.00	56	6	33	11	6
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	46.00	46	1	10	1	34
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	40.00	40	9	2	14	15
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	36.00	36	0	25	6	5
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	36.00	36	1	14	13	8
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	30.00	30	1	0	20	9
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	29.00	29	6	0	5	18
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	24.00	24	0	0	0	24
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	17.00	17	2	11	1	3
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	15.00	15	0	1	1	13
....................................................................................................................................................CGAACATGGATCTAGTGCACGGT-................................................................................................................................	23	1	14.00	14	5	4	3	2
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	13.00	13	1	8	0	4
..................................................................................................................................................GGCGAACATGGATCTAGTG.......................................................................................................................................	19	1	12.00	12	1	0	6	5
....................................................................................................................................................CGAACATGGATCTAGTGCA.....................................................................................................................................	19	1	10.00	10	0	1	0	9
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	7.00	7	1	4	2	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCG...........................................................................................	20	1	7.00	7	0	2	4	1
..................................................................................................................................................GGCGAACATGGATCTAGT........................................................................................................................................	18	1	6.00	6	0	4	1	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGT..........................................................................................	18	1	6.00	6	0	2	3	1
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-................................................................................................................................	25	1	5.00	5	1	2	1	1
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT......................................................................................	23	1	5.00	5	0	0	0	5
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT.....................................................................................	25	1	5.00	5	1	0	0	4
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTAT......................................................................................	22	1	5.00	5	1	1	0	3

droEre2

CCACAGC-GGAGA------AGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACT----ACGAA----------GAG------AG-------CTTTCCAT--------------C--TCG-CGG	Size	Hit Count	Total Norm	Total	V040 Embryo	V060 Head	V107 Male-body	V108 Head	M055 Female-body	M057 Embryo
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	28097.00	28097	553	3432	2550	6619	14439	504
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	8321.00	8321	180	351	1993	4588	1198	11
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	6872.00	6872	487	472	411	1866	3582	54
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	5857.00	5857	89	512	747	1367	3037	105
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	3817.00	3817	162	94	1636	908	925	92
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	1804.00	1804	187	46	554	543	348	126
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	997.00	997	0	3	2	7	985	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	399.00	399	10	4	89	39	237	20
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	294.00	294	2	17	51	56	168	0
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	237.00	237	0	1	1	0	235	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	207.00	207	26	7	26	100	48	0
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	194.00	194	0	7	91	42	54	0
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	188.00	188	0	1	1	2	184	0
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	157.00	157	2	4	36	26	73	16
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	136.00	136	4	1	45	24	54	8
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	99.00	99	2	8	2	14	73	0
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	98.00	98	1	1	5	9	80	2
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	94.00	94	6	8	30	23	24	3
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	83.00	83	0	0	2	9	72	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	83.00	83	5	1	8	13	12	44
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	77.00	77	0	1	12	49	15	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	72.00	72	0	8	26	32	6	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	68.00	68	7	6	10	22	9	14
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	58.00	58	1	0	15	7	34	1
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	49.00	49	0	1	4	34	10	0
.........................................................................................................................................................................GT-GGTTCATGATTAAGTTCG..............................................................................................................	20	1	47.00	47	7	1	11	14	10	4
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	46.00	46	3	0	11	13	17	2
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	43.00	43	0	0	10	9	24	0
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	28.00	28	1	0	0	14	12	1
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	24.00	24	11	0	0	6	2	5
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	22.00	22	0	2	12	3	5	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	17.00	17	0	0	3	1	11	2
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	15.00	15	2	0	4	2	7	0
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	13.00	13	0	0	0	5	8	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	13.00	13	0	0	1	6	3	3
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA.......................................................................................	20	1	12.00	12	1	0	3	0	8	0
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	12.00	12	2	0	3	3	2	2
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	12.00	12	0	0	5	1	5	1
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT......................................................................................	23	1	11.00	11	0	0	1	0	10	0
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT.....................................................................................	25	1	10.00	10	0	0	0	0	10	0
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	10.00	10	0	0	0	1	9	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTA.......................................................................................	19	1	6.00	6	0	0	1	1	4	0
....................................................................................................................................................CGAACATGGATCTAGTGCACGGT-................................................................................................................................	23	1	6.00	6	1	0	1	2	1	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGT..........................................................................................	18	1	5.00	5	0	0	1	1	2	1
.................................................................................................................................................................................................CTAGATTTCATGCTCGTC.........................................................................................	18	1	5.00	5	0	0	0	0	5	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-................................................................................................................................	25	1	4.00	4	0	0	0	1	3	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCG...........................................................................................	20	1	4.00	4	0	1	1	0	2	0

droYak3

CCAAATGTGGG---GGGGATGTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACT----ACGAA----------GAG------AG-------CTTTCCAT--------------C--TCG-CGG	Size	Hit Count	Total Norm	Total	V046 Embryo	V052 Head	V120 Male-body	V058 Head	M026 Head	M043 Female-body	M056 Embryo
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	19798.00	19798	948	3401	611	5773	394	5422	3249
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	7650.00	7650	272	645	1559	1033	3373	663	105
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	5377.00	5377	410	237	1460	472	469	1133	1196
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	4754.00	4754	1105	456	94	625	18	2041	415
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	4121.00	4121	147	603	240	975	523	1124	509
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	2036.00	2036	387	28	112	71	122	275	1041
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	452.00	452	0	2	1	2	0	444	3
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	324.00	324	9	3	1	3	11	12	285
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	308.00	308	7	7	7	17	27	72	171
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	259.00	259	0	6	133	10	2	94	14
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	223.00	223	30	2	16	4	10	42	119
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	210.00	210	0	17	35	39	19	92	8
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	141.00	141	1	0	0	0	0	140	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	138.00	138	37	4	8	10	51	18	10
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	117.00	117	2	3	1	1	16	87	7
.........................................................................................................................................................................GT-GGTTCATGATTAAGTTCG..............................................................................................................	20	1	117.00	117	20	0	3	0	0	15	79
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	100.00	100	28	3	1	5	1	12	50
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	96.00	96	5	7	5	6	54	9	10
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	96.00	96	0	0	0	0	0	96	0
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	94.00	94	7	8	13	4	6	44	12
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	87.00	87	19	0	0	2	1	6	59
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	57.00	57	7	0	9	3	4	7	27
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	53.00	53	0	2	24	2	0	24	1
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	53.00	53	5	2	0	5	0	33	8
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	52.00	52	6	1	3	3	9	7	23
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	43.00	43	0	0	0	0	0	43	0
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	31.00	31	2	0	9	1	1	7	11
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	30.00	30	1	0	0	1	19	2	7
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	26.00	26	5	2	2	4	9	2	2
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	21.00	21	1	0	1	2	4	7	6
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	20.00	20	0	2	1	1	0	5	11
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	19.00	19	1	0	3	0	2	11	2
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	18.00	18	0	3	0	5	0	9	1
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	15.00	15	0	0	0	0	1	6	8
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	14.00	14	1	0	3	0	1	2	7
....................................................................................................................................................CGAACATGGATCTAGTGCACGGT-................................................................................................................................	23	1	13.00	13	1	0	0	2	0	0	10
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	10.00	10	0	0	1	1	2	3	3
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	8.00	8	0	0	0	0	0	8	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	8.00	8	0	0	1	0	0	7	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA.......................................................................................	20	1	7.00	7	0	0	1	0	1	4	1
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-................................................................................................................................	25	1	7.00	7	1	0	2	1	1	1	1
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTA.......................................................................................	19	1	5.00	5	0	0	0	1	0	4	0
.....................................................................................................................................................GAACATGGATCTAGTGCACGG..................................................................................................................................	21	1	5.00	5	0	0	1	0	1	3	0

droEug1

AA----T-GGGGAA-----GGAAAGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------CTTTTCTC--------------C--CCG-AGG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GGA---T-GCGGA------TGCGGATG------------C---G------GA---------------------------------------------------------------------GGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGCTCATGGTGAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----GCGAA----------GAG------AG-------TTTTCCCT--------------G--CCGAGGG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AAAAG--------------------GAAGGAGGATGTGGATGTGGATGTGGA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTCC-------------------TCG-AGG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CTAAAAA-GAAAA------AGCTGGTA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTCC---------------------C-CGG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AAAAAG--------------CTGGGGA------------G---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTCC-----------------------CCG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AAAAAAA--AGAA------GCTGGGGA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACGAA----------GAG------AG-------TTTTTC-------------------TCG-GGG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AG---CT-GGAGA------TC-GGGGC------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----ACAGAACCACAAGAAGAG------AG-------TTT-CCTT--AGCC--------C--TAA-CCC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

G--------------------TGGAAA------------A---GGATTTGGG----------------------------------------------------------------------GTCTTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----CCAAA----------GAGTCGGATAGTGGAGAGT---CAACTAACTCCCATCCCTGCCCCA-AAA	Size	Hit Count	Total Norm	Total	V105 Male-body	V106 Head	V055 Head	V039 Embryo	M044 Female-body	M058 Embryo
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	27015.00	27015	11841	8383	2047	1407	2650	687
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	26395.00	26395	2194	3914	10547	1031	6750	1959
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	10648.00	10648	1469	1219	1562	737	3261	2400
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	5080.00	5080	294	1767	713	305	1885	116
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	2985.00	2985	485	1520	122	25	715	118
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	1404.00	1404	612	4	11	1	731	45
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	1299.00	1299	410	397	80	25	341	46
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	1032.00	1032	331	71	168	4	447	11
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	503.00	503	3	1	5	1	484	9
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	243.00	243	0	5	0	0	237	1
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	192.00	192	5	4	1	0	181	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	166.00	166	51	1	1	1	111	1
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	161.00	161	10	40	4	1	62	44
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	138.00	138	0	0	0	0	138	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	129.00	129	18	57	5	3	34	12
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	98.00	98	9	6	3	1	33	46
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	80.00	80	3	6	25	1	41	4
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	54.00	54	12	1	1	0	35	5
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	49.00	49	27	4	2	0	15	1
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	48.00	48	4	0	1	0	43	0
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	46.00	46	1	26	0	2	11	6
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	41.00	41	1	0	1	0	39	0
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	38.00	38	0	0	0	0	38	0
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	26.00	26	0	15	1	2	7	1
.........................................................................................................................................................................GT-GTTTCATGATTAAGTTCG..............................................................................................................	20	1	23.00	23	4	7	0	4	2	6
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	21.00	21	0	2	2	0	17	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGT..........................................................................................	18	1	19.00	19	3	0	0	0	16	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	16.00	16	3	1	1	0	9	2
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	15.00	15	0	1	7	1	4	2
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA.......................................................................................	20	1	13.00	13	2	0	0	0	11	0
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	12.00	12	4	0	1	0	7	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTAT......................................................................................	22	1	10.00	10	5	0	0	0	5	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	10.00	10	0	5	0	0	3	2
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	8.00	8	0	0	0	1	7	0
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	8.00	8	2	2	1	0	3	0
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	8.00	8	0	5	0	0	3	0
..................................................................................................................................................GGCGAACATGGATCTAGTG.......................................................................................................................................	19	1	7.00	7	0	3	0	0	4	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTC.........................................................................................	18	1	6.00	6	0	0	0	1	4	1
.................................................................................................................................................CGGCGAACATGGATCTAGTGCA.....................................................................................................................................	22	1	6.00	6	0	2	0	0	4	0
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	6.00	6	0	0	0	0	5	1

droBip1

AG-----------------------AA------------A---G------GA---------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----CCAAA----------GAG------AG-------T---CCA-------------------CA-CAG	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGAGCCT-GGG---TCTGATCCGGCAG------------C---G------TT---------------------------------------------------------------------TGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACA----ACGAA-CCGAAAGA-----------GCAGAG--CAACGCAG--------------T--TGT-CGA	Size	Hit Count	Total Norm	Total	V112 Male-body	V043 Embryo	V051 Head	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	24030.00	24030	1262	1658	6120	44	13800	907	239
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	9723.00	9723	926	435	1305	70	6480	391	116
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	8886.00	8886	2591	787	848	173	4380	66	41
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	7156.00	7156	229	1471	873	0	4430	135	18
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	3026.00	3026	391	517	90	14	1682	312	20
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	2946.00	2946	476	413	113	25	1722	182	15
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	1042.00	1042	1	1	3	0	1036	1	0
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	998.00	998	32	19	30	12	804	60	41
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	503.00	503	16	31	57	2	389	3	5
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	495.00	495	0	0	2	0	493	0	0
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	378.00	378	0	0	1	0	376	1	0
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	371.00	371	0	1	0	1	369	0	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	324.00	324	13	21	2	3	192	82	11
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	314.00	314	30	8	22	3	243	5	3
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	250.00	250	19	44	6	0	155	23	3
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	112.00	112	0	2	0	0	108	2	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	95.00	95	5	1	1	0	84	4	0
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	94.00	94	0	1	2	0	88	2	1
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	91.00	91	0	24	1	0	52	13	1
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	77.00	77	6	7	1	2	51	9	1
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	62.00	62	2	4	5	0	50	1	0
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	60.00	60	0	0	0	0	60	0	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	44.00	44	1	14	4	0	22	3	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	36.00	36	1	1	0	0	34	0	0
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	35.00	35	0	0	1	0	33	1	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	28.00	28	0	2	4	0	21	1	0
.........................................................................................................................................................................GT-TGTTCATGATTAAGTTCG..............................................................................................................	20	1	27.00	27	0	4	1	0	21	1	0
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	27.00	27	0	0	0	0	27	0	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	20.00	20	0	1	0	0	19	0	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	19.00	19	0	0	1	0	18	0	0
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	18.00	18	3	3	0	0	11	1	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	17.00	17	0	0	2	0	15	0	0
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	16.00	16	0	4	3	3	4	1	1
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	14.00	14	3	2	0	0	6	3	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	14.00	14	3	2	2	0	7	0	0
..................................................................................................................................................GGCGAACATGGATCTAGTG.......................................................................................................................................	19	1	13.00	13	0	0	1	0	12	0	0
................................................................................................................................................................................................ACTAGATTTCATGCTCGT..........................................................................................	18	1	13.00	13	0	0	0	0	13	0	0
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	12.00	12	1	1	0	0	9	1	0
....................................................................................................................................................CGAACATGGATCTAGTGCA.....................................................................................................................................	19	1	11.00	11	0	0	0	0	11	0	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA.......................................................................................	20	1	9.00	9	1	0	0	0	8	0	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	8.00	8	0	0	1	0	7	0	0
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	7.00	7	1	1	0	0	3	2	0
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT.....................................................................................	25	1	7.00	7	0	0	0	0	7	0	0
....................................................................................................................................................CGAACATGGATCTAGTGC......................................................................................................................................	18	1	6.00	6	0	0	0	0	6	0	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-................................................................................................................................	25	1	6.00	6	0	0	0	0	6	0	0
...................................................................................................................................................................................................AGATTTCATGCTCGTCTA.......................................................................................	18	1	6.00	6	0	0	0	0	6	0	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTC.........................................................................................	18	1	5.00	5	0	0	0	0	5	0	0
.....................................................................................................................................................GAACATGGATCTAGTGCAC....................................................................................................................................	19	1	5.00	5	0	0	0	0	5	0	0
.....................................................................................................................................................GAACATGGATCTAGTGCA.....................................................................................................................................	18	1	4.00	4	0	0	0	0	4	0	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTA.......................................................................................	19	1	4.00	4	0	0	0	0	4	0	0
..................................................................................................................................................GGCGAACATGGATCTAGT........................................................................................................................................	18	1	4.00	4	0	0	0	0	4	0	0
.....................................................................................................................................................................................................................TTAAGTTGGGTCAACACA----ACGAA-CC.........................................................	25	1	3.00	3	0	0	0	0	1	1	1
..........................................................................................................................................................................T-TGTTCATGATTAAGTTCG..............................................................................................................	19	1	3.00	3	0	0	0	0	3	0	0

droPer2

AGAGCCT-GGG---TCTGATCCGGCAG------------C---G------TT---------------------------------------------------------------------TGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACA----ACGAA-CCGAAAGA-----------GCAGAG--CAACGCAG--------------T--TGT-CGA	Size	Hit Count	Total Norm	Total	V111 Male-body	V042 Embryo	V050 Head	V057 Head	M021 Embryo	M042 Female-body
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	15748.00	15748	720	625	3927	6110	341	4025
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	7006.00	7006	1811	455	703	1578	1571	888
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	5831.00	5831	410	218	1079	2119	340	1665
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	2844.00	2844	118	327	598	778	42	981
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	1399.00	1399	628	129	56	220	214	152
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	1291.00	1291	467	99	67	218	269	171
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	298.00	298	1	0	1	2	3	291
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	272.00	272	0	5	2	1	260	4
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	263.00	263	36	5	27	72	18	105
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	209.00	209	22	12	46	50	8	71
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	123.00	123	45	4	11	42	3	18
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	109.00	109	0	0	1	1	0	107
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	75.00	75	18	6	2	16	16	17
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	74.00	74	34	3	3	20	3	11
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	72.00	72	2	0	0	1	0	69
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	68.00	68	0	0	0	0	0	68
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	64.00	64	12	5	2	3	14	28
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	26.00	26	8	1	1	2	2	12
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	25.00	25	0	6	0	2	12	5
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	20.00	20	1	0	2	6	9	2
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	18.00	18	0	1	0	1	7	9
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	17.00	17	2	0	0	0	13	2
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	16.00	16	4	4	2	1	0	5
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	16.00	16	0	0	0	2	7	7
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	14.00	14	1	4	3	1	0	5
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	13.00	13	3	0	1	1	5	3
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	11.00	11	2	1	0	1	0	7
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	10.00	10	3	0	3	1	2	1
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	9.00	9	0	0	0	1	0	8
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	6.00	6	2	0	0	1	2	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	6.00	6	0	0	0	1	1	4
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	5.00	5	0	1	0	3	0	1
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	4.00	4	0	0	0	0	0	4
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	4.00	4	1	1	0	2	0	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTC.........................................................................................	18	1	4.00	4	0	0	0	1	2	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGT..........................................................................................	18	1	4.00	4	1	1	0	1	0	1
...................................................................................................................................................................................................AGATTTCATGCTCGTCTA.......................................................................................	18	1	4.00	4	0	0	0	0	4	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA.......................................................................................	20	1	4.00	4	1	0	0	1	0	2
..................................................................................................................................................GGCGAACATGGATCTAGTG.......................................................................................................................................	19	1	4.00	4	1	0	0	0	0	3
.......................................................................................................................................................ACATGGATCTAGTGCACG...................................................................................................................................	18	1	3.00	3	0	1	0	2	0	0

droWil2

TGTGTGT-GTGGA------TGGATGGA---------TGGA---T-----GGA-GTCCT-TTCTA---------------------------------------------TGTGGCAGC---GTCTCT----TGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTTTGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACA----AC-AA----------GAG--------CGCAG--C-------------------------------	Size	Hit Count	Total Norm	Total	V117 Male-body	V118 Embryo	V119 Head	M020 Head	M045 Female-body
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	27442.00	27442	2161	7098	5482	11357	1344
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	25045.00	25045	626	8456	5358	2267	8338
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	10712.00	10712	104	6144	1675	98	2691
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	7479.00	7479	329	1918	1080	2307	1845
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	4568.00	4568	227	2389	655	770	527
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	3713.00	3713	473	1308	473	836	623
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	615.00	615	1	8	4	0	602
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	324.00	324	26	28	40	70	160
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	243.00	243	109	6	7	10	111
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	192.00	192	0	4	1	0	187
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	163.00	163	1	81	6	44	31
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	148.00	148	8	109	12	3	16
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	133.00	133	0	1	0	3	129
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	125.00	125	5	35	5	21	59
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	103.00	103	1	35	23	31	13
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	100.00	100	0	8	1	79	12
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	99.00	99	2	2	4	2	89
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	85.00	85	0	9	2	36	38
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	78.00	78	0	13	3	58	4
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	66.00	66	1	23	6	27	9
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	60.00	60	1	41	10	3	5
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	54.00	54	9	18	6	1	20
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	53.00	53	0	14	4	0	35
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	47.00	47	2	21	3	5	16
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	40.00	40	13	4	2	1	20
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	38.00	38	3	4	5	2	24
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	35.00	35	7	12	1	8	7
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	30.00	30	0	6	3	17	4
.........................................................................................................................................................................GTTTGTTCATGATTAAGTTCG..............................................................................................................	21	1	29.00	29	0	19	2	7	1
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	29.00	29	1	12	10	0	6
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	19.00	19	1	7	2	1	8
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	18.00	18	1	3	6	8	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	17.00	17	1	0	3	2	11
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT.................................................................................................................................	24	1	15.00	15	2	9	0	1	3
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	15.00	15	0	0	0	0	15
...................................................................................................................................................................................................AGATTTCATGCTCGTCTA.......................................................................................	18	1	14.00	14	0	1	0	4	9
.................................................................................................................................................CGGCGAACATGGATCTAGTGCA.....................................................................................................................................	22	1	13.00	13	0	10	1	1	1
....................................................................................................................................................CGAACATGGATCTAGTGCACGGT.................................................................................................................................	23	1	9.00	9	0	5	2	1	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGT..........................................................................................	18	1	8.00	8	0	0	0	1	7
..................................................................................................................................................GGCGAACATGGATCTAGTG.......................................................................................................................................	19	1	8.00	8	0	3	4	0	1
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	8.00	8	1	0	2	3	2
......................................................................................................................................................AACATGGATCTAGTGCACG...................................................................................................................................	19	1	5.00	5	1	1	0	3	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTA.......................................................................................	19	1	5.00	5	2	0	0	0	3
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT......................................................................................	23	1	5.00	5	0	0	0	0	5
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	5.00	5	2	0	0	0	3
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA.......................................................................................	24	1	4.00	4	0	1	0	1	2
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGTT................................................................................................................................	25	1	4.00	4	0	2	1	0	1
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT.................................................................................................................................	25	1	4.00	4	2	0	1	0	1
.................................................................................................................................................CGGCGAACATGGATCTAGTGCAC....................................................................................................................................	23	1	4.00	4	1	3	0	0	0
..................................................................................................................................................GGCGAACATGGATCTAGT........................................................................................................................................	18	1	4.00	4	0	4	0	0	0

droVir3

TCAGCTT-GGCGAG--AG-AAAGGGAG------------A---G------GC----------TGCAGCTGCTGCCTGATTTTTGATTTTTTTTTTTTTTTTGTTTCGCT--------CTTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACA---------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	V116 Male-body	V053 Head	V047 Embryo	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	1004906.00	1004906	1868	5912	995	382	654	12316	939	23002	40648	75513	2096	5312	3276	2564	222	570	901	20417	14097	5860	15702	17184	9509	18639	27296	26446	49750	42751	35535	79170	66487	49408	45864	18052	53122	25352	15272	22144	35366	37021	26988	42748	27556
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	302846.00	302846	363	868	304	50	35	3911	89	8907	4926	21607	403	2522	576	1864	54	175	232	3344	2506	952	3235	2354	2148	3611	4642	5377	16260	16676	15649	37039	36934	8831	7931	3290	10505	9818	2585	6181	11482	16009	9978	14312	4311
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	275958.00	275958	2151	2949	196	816	1609	8389	217	10920	17450	40634	2173	5781	2671	2245	40	135	197	2502	1698	1098	2318	2103	1247	10247	3028	2411	28383	8072	6331	14791	13178	7681	7623	3216	9041	2167	8713	2067	1975	3001	1725	20100	12669
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	83081.00	83081	7147	3367	408	2258	8973	3444	44	2007	3738	8957	2315	2257	2307	1013	165	824	965	579	444	326	569	585	367	1590	771	587	5104	1672	1180	2632	2074	1335	1517	592	1615	391	1456	450	283	807	281	3417	2268
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	9579.00	9579	1865	338	127	130	285	1534	62	219	256	302	67	89	112	36	13	67	48	206	132	120	216	96	49	195	71	166	239	178	148	282	285	188	219	84	274	35	264	42	37	71	55	180	197
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	6269.00	6269	5	5	8	0	2	107	4	40	23	80	5	1	4	4	1	2	3	122	62	25	103	59	77	13	142	147	75	374	326	883	518	231	204	63	217	388	8	200	848	463	330	78	19
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	5694.00	5694	586	113	260	116	131	461	130	468	200	474	57	168	100	71	2	5	5	33	24	15	39	13	11	138	9	70	338	126	145	334	240	74	62	25	83	3	152	3	4	5	4	298	99
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	2031.00	2031	54	136	11	15	82	235	0	38	50	162	21	4	12	8	0	8	3	28	15	7	13	19	6	56	22	19	99	43	31	69	56	104	121	53	134	20	64	18	10	24	9	76	76
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	1393.00	1393	1	2	0	0	1	933	0	6	13	19	0	3	2	3	1	0	0	6	6	3	6	3	1	5	7	10	15	18	12	44	35	20	32	13	18	19	1	25	20	31	31	20	8
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	789.00	789	48	9	3	10	20	133	17	14	11	23	2	1	3	1	3	3	1	19	10	5	16	7	5	16	5	9	32	14	11	57	35	19	31	6	44	14	16	17	18	24	18	20	19
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	784.00	784	2	10	8	19	27	25	1	6	6	23	1	14	6	13	0	2	3	21	6	5	19	12	12	6	34	25	11	42	35	84	66	29	35	18	47	19	2	6	17	29	17	14	7
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	721.00	721	2	1	0	0	1	654	0	1	4	10	0	3	1	1	0	0	0	0	0	0	1	0	1	0	1	1	0	1	0	6	2	5	8	1	2	2	3	3	2	0	0	1	3
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	567.00	567	42	26	3	2	29	21	3	16	16	48	26	13	15	6	2	11	9	11	6	4	5	6	1	13	9	7	17	8	8	15	8	17	22	7	20	1	17	6	2	7	5	26	31
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	445.00	445	1	3	2	12	57	7	0	10	9	56	2	0	2	0	0	0	0	5	4	4	6	2	4	11	5	3	33	24	17	17	10	6	15	3	7	16	14	12	10	11	8	28	9
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	421.00	421	0	0	1	0	0	293	0	2	1	5	0	0	0	0	1	0	0	0	0	0	1	2	2	2	2	0	3	10	4	18	12	5	7	1	7	6	0	3	9	9	6	5	4
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	376.00	376	0	1	0	1	2	20	0	15	22	58	1	8	0	2	0	1	0	5	3	2	3	2	2	8	3	3	53	19	6	23	10	2	7	2	4	3	20	2	3	5	6	33	16
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	367.00	367	2	0	0	0	1	8	0	17	13	42	3	13	4	10	0	0	0	9	11	3	10	7	3	2	4	5	25	33	15	11	17	6	17	0	8	4	7	6	6	6	6	21	12
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	354.00	354	8	13	3	15	37	29	2	7	25	19	2	5	6	1	0	0	2	1	5	3	3	1	2	22	4	4	15	3	6	12	17	12	7	8	7	2	6	3	3	4	3	12	15
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	310.00	310	39	19	0	2	5	55	1	3	4	9	0	0	0	0	0	0	1	15	5	4	5	4	2	7	4	3	15	4	4	8	4	12	17	12	11	0	6	1	2	2	0	9	16
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	283.00	283	1	1	1	1	2	259	0	0	1	2	0	0	1	0	0	1	1	0	1	0	1	0	0	0	0	0	3	2	0	0	1	1	0	0	1	0	0	0	0	0	0	1	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	249.00	249	6	4	4	0	0	64	5	5	7	15	1	4	0	4	0	0	0	4	1	1	0	1	2	6	2	1	9	8	5	9	6	7	9	1	6	6	13	2	4	3	2	18	4
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	248.00	248	15	8	8	6	12	34	23	7	1	23	0	1	0	9	0	0	0	4	1	1	3	1	1	2	2	1	22	1	4	11	16	8	2	0	4	0	1	0	0	0	0	11	5
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	219.00	219	17	2	7	12	8	54	3	4	0	6	0	2	2	0	0	1	0	2	1	2	3	1	0	4	0	0	11	9	6	9	13	4	12	1	4	1	5	1	4	0	1	4	3
...................................................................................................................................................................................................AGATTTCATGCTCGTCTA.......................................................................................	18	1	200.00	200	0	0	1	0	1	6	0	15	3	35	1	14	1	4	0	0	0	3	0	1	4	1	0	5	2	1	27	10	7	7	8	2	1	0	1	1	10	2	2	3	0	16	5
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA.......................................................................................	20	1	161.00	161	0	0	0	0	0	4	0	25	2	28	0	5	1	3	0	0	0	0	0	0	1	1	0	6	2	2	27	9	1	10	2	2	0	1	0	1	1	2	1	0	0	18	6
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT.....................................................................................	25	1	159.00	159	0	0	0	0	0	5	1	0	0	1	0	0	0	0	0	0	0	7	5	0	2	0	7	1	4	7	2	8	6	16	12	5	5	4	7	12	0	7	16	11	7	1	0
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	150.00	150	3	0	0	1	4	101	1	1	1	4	0	1	1	0	0	0	0	1	1	0	0	1	0	0	0	2	4	2	0	4	8	2	2	2	0	0	0	0	0	1	1	1	0
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTA.......................................................................................	19	1	139.00	139	0	0	0	0	0	8	0	16	4	19	2	0	1	7	0	0	0	1	3	0	1	3	1	2	1	1	14	8	2	10	5	1	2	0	2	2	8	0	1	0	2	4	8
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	138.00	138	9	6	10	1	1	14	7	8	1	11	0	1	0	1	0	0	0	1	0	1	0	0	2	4	0	2	23	5	0	8	2	2	1	3	1	0	2	0	0	1	0	7	3
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	108.00	108	6	3	1	8	4	10	3	2	2	8	0	3	4	1	0	0	0	0	1	2	0	0	2	3	0	2	5	1	2	11	7	0	2	2	5	0	3	0	0	0	0	2	3
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	95.00	95	5	2	0	2	6	11	0	1	1	4	1	0	3	0	1	0	0	1	3	1	1	0	2	3	0	0	6	3	3	10	8	5	1	1	1	1	1	1	2	2	1	0	1
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA.......................................................................................	24	1	80.00	80	0	0	0	2	1	8	1	1	0	2	0	0	0	0	0	0	0	1	2	0	2	0	3	0	0	1	0	4	8	10	12	5	2	1	3	1	0	1	0	5	3	1	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTC.........................................................................................	18	1	72.00	72	0	0	0	0	2	12	0	3	1	8	0	8	0	1	0	0	0	0	0	1	1	1	0	2	0	0	8	4	0	7	3	1	0	0	0	0	1	0	0	0	0	7	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	72.00	72	3	0	2	0	0	13	0	4	0	3	1	2	0	1	0	0	0	1	0	0	0	0	1	0	1	0	10	2	1	5	4	1	2	0	4	0	2	1	1	2	0	4	1
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	68.00	68	7	10	1	0	3	16	0	0	0	0	2	1	0	0	0	0	0	1	0	1	2	1	1	1	1	0	2	0	2	2	0	0	1	0	5	0	2	0	0	0	0	0	6
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	61.00	61	0	0	0	0	2	28	0	1	0	3	0	2	0	0	0	0	1	0	0	0	0	0	0	5	0	1	4	0	2	2	1	0	3	0	0	0	1	0	1	0	0	4	0
.........................................................................................................................................................................GT-TGTTCATGATTAAGTTCG..............................................................................................................	20	1	51.00	51	0	0	1	0	0	11	1	1	1	8	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	5	3	4	7	4	1	0	0	1	0	0	0	1	0	1	0	0
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	44.00	44	4	1	3	1	0	10	0	1	0	3	0	1	1	0	1	0	0	2	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	2	0	6	0	1	0	0	2	0
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	43.00	43	1	2	0	0	0	18	0	0	0	0	1	0	0	0	0	0	0	1	1	0	2	1	0	0	0	0	1	0	0	2	1	5	3	1	1	0	2	0	0	0	0	0	0
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	39.00	39	6	1	0	0	1	10	1	2	1	2	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	3	3	0	1	0	2	0	0	0	0	0	0	1	2
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	37.00	37	3	1	6	0	1	4	2	0	0	1	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	2	2	2	3	1	0	0	0	1	0	0	0	0	0	2	3	0

droMoj3

ACCAAGT-GAGAA------GGAGAGAG------------A---G------GGAGGTCTCTACTGCAGCTGCTGCCTGATATT-----TCTTTT-------------------------TTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAATACACACAGCGAA----------AAC----ATGGCCAAGAGA---CCAT--------------T--ACA-AAG	Size	Hit Count	Total Norm	Total	V110 Male-body	V056 Head	V049 Head	V041 Embryo	M046 Female-body	M060 Embryo
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	42058.00	42058	1863	4827	3733	1593	16519	13523
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	16210.00	16210	1790	2580	2025	406	6353	3056
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	14912.00	14912	6000	2263	1722	1130	3012	785
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	10473.00	10473	443	766	597	1872	4940	1855
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	4285.00	4285	646	151	88	631	347	2422
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	4004.00	4004	1246	410	220	329	606	1193
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	1213.00	1213	1	0	0	0	1197	15
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	792.00	792	80	54	44	26	573	15
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	646.00	646	11	7	4	36	19	569
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	480.00	480	112	5	0	1	318	44
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	454.00	454	1	3	0	1	446	3
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	405.00	405	26	19	21	12	113	214
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	356.00	356	0	0	0	0	354	2
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	274.00	274	25	6	5	47	12	179
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	215.00	215	2	3	1	0	209	0
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	162.00	162	1	2	0	8	101	50
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	131.00	131	0	0	1	22	5	103
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	116.00	116	25	5	1	9	25	51
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	95.00	95	21	1	0	2	65	6
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	88.00	88	16	7	3	4	27	31
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	69.00	69	2	0	0	0	57	10
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	67.00	67	5	7	2	7	6	40
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	67.00	67	8	3	4	18	16	18
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	50.00	50	0	0	1	0	49	0
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	43.00	43	5	1	2	1	27	7
.........................................................................................................................................................................GT-TGTTCATGATTAAGTTCG..............................................................................................................	20	1	42.00	42	6	1	0	11	14	10
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	37.00	37	9	2	3	0	13	10
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	36.00	36	12	2	1	0	15	6
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	34.00	34	0	3	1	1	11	18
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	33.00	33	9	2	3	3	6	10
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	31.00	31	0	2	1	1	10	17
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	29.00	29	9	1	0	0	17	2
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	27.00	27	11	3	5	2	6	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	26.00	26	1	6	2	2	6	9
.................................................................................................................................................CGGCGAACATGGATCTAGTGCAC....................................................................................................................................	23	1	25.00	25	0	0	0	1	0	24
.....................................................................................................................................................GAACATGGATCTAGTGCACG...................................................................................................................................	20	1	20.00	20	6	1	1	0	4	8
.................................................................................................................................................CGGCGAACATGGATCTAGTGCA.....................................................................................................................................	22	1	15.00	15	1	1	0	3	0	10
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	12.00	12	1	2	1	0	1	7
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT.....................................................................................	25	1	11.00	11	0	0	0	0	9	2
.................................................................................................................................................CGGCGAACATGGATCTAGTGC......................................................................................................................................	21	1	10.00	10	1	0	0	4	0	5

droGri2

-------------------------------------------------------------------------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACAACACAAAAAAAAAAGAGGAG------AGCAAAG--C-------------------------------	Size	Hit Count	Total Norm	Total	V109 Male-body	M041 Female-body
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT........................................................................................	22	1	6297.00	6297	1775	4522
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGT..........................................................................................	20	1	1367.00	1367	1134	233
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTC.........................................................................................	21	1	933.00	933	435	498
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA.......................................................................................	23	1	551.00	551	70	481
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCT........................................................................................	21	1	382.00	382	0	382
..................................................................................................................................................GGCGAACATGGATCTAGTGCACG...................................................................................................................................	23	1	180.00	180	94	86
...................................................................................................................................................GCGAACATGGATCTAGTGCACG...................................................................................................................................	22	1	148.00	148	72	76
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT......................................................................................	24	1	59.00	59	4	55
..............................................................................................................................................................................................TGACTAGATTTCATGCTCG...........................................................................................	19	1	57.00	57	22	35
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTC.........................................................................................	20	1	33.00	33	0	33
...............................................................................................................................................................................................GACTAGATTTCATGCTCGT..........................................................................................	19	1	30.00	30	0	30
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA.......................................................................................	22	1	30.00	30	0	30
...................................................................................................................................................GCGAACATGGATCTAGTGCAC....................................................................................................................................	21	1	18.00	18	6	12
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT........................................................................................	20	1	17.00	17	3	14
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT........................................................................................	23	1	14.00	14	5	9
...................................................................................................................................................GCGAACATGGATCTAGTGCA.....................................................................................................................................	20	1	11.00	11	1	10
..................................................................................................................................................................................................TAGATTTCATGCTCGTCT........................................................................................	18	1	10.00	10	0	10
.................................................................................................................................................CGGCGAACATGGATCTAGTGCACG...................................................................................................................................	24	1	10.00	10	7	3
....................................................................................................................................................CGAACATGGATCTAGTGCACG...................................................................................................................................	21	1	8.00	8	0	8
..................................................................................................................................................GGCGAACATGGATCTAGTGCA.....................................................................................................................................	21	1	7.00	7	3	4
..............................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT.....................................................................................	25	1	6.00	6	0	6
..............................................................................................................................................................................................TGACTAGATTTCATGCTC............................................................................................	18	1	6.00	6	0	6
...............................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT......................................................................................	23	1	5.00	5	0	5
..................................................................................................................................................GGCGAACATGGATCTAGTGC......................................................................................................................................	20	1	4.00	4	1	3
...................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-................................................................................................................................	24	1	3.00	3	1	2
.........................................................................................................................................................................GT-TGTTCATGATTAAGTTCG..............................................................................................................	20	1	3.00	3	3	0
.................................................................................................................................................CGGCGAACATGGATCTAGTGCAC....................................................................................................................................	23	1	3.00	3	2	1
..................................................................................................................................................GGCGAACATGGATCTAGTGCACGG..................................................................................................................................	24	1	3.00	3	2	1
.................................................................................................................................................................................................CTAGATTTCATGCTCGTCT........................................................................................	19	1	3.00	3	2	1
....................................................................................................................................................CGAACATGGATCTAGTGCACGG..................................................................................................................................	22	1	2.00	2	2	0
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGT..........................................................................................	21	1	2.00	2	2	0
...................................................................................................................................................GCGAACATGGATCTAGTG.......................................................................................................................................	18	1	2.00	2	0	2
....................................................................................................................................................CGAACATGGATCTAGTGCAC....................................................................................................................................	20	1	2.00	2	1	1
..................................................................................................................................................GGCGAACATGGATCTAGTGCAC....................................................................................................................................	22	1	2.00	2	0	2
..................................................................................................................................................GGCGAACATGGATCTAGTG.......................................................................................................................................	19	1	2.00	2	0	2
................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA.......................................................................................	21	1	2.00	2	0	2
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTAT......................................................................................	20	1	1.00	1	0	1
..................................................................................................................................................................................................TAGATTTCATGCTCGTCTA.......................................................................................	19	1	1.00	1	0	1
...................................................................................................................................................GCGAACATGGATCTAGTGCACGG..................................................................................................................................	23	1	1.00	1	0	1
.................................................................................................................................................CGGCGAACATGGATCTAGTGCA.....................................................................................................................................	22	1	1.00	1	1	0
...................................................................................................................................................GCGAACATGGATCTAGTGC......................................................................................................................................	19	1	1.00	1	0	1
...............................................................................................................................................................................................GACTAGATTTCATGCTCG...........................................................................................	18	1	1.00	1	0	1
...................................................................................................................................................................................................AGATTTCATGCTCGTCTA.......................................................................................	18	1	1.00	1	0	1
.............................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC.........................................................................................	22	1	1.00	1	0	1
....................................................................................................................................................CGAACATGGATCTAGTGCA.....................................................................................................................................	19	1	1.00	1	0	1
................................................................................................................................................................................................ACTAGATTTCATGCTCGTC.........................................................................................	19	1	1.00	1	0	1

dsi_99

3R:24713820-24713882 +

Known Ortholog

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-32.2	-32.2	-32.1