ID:

dsi_95

 Coordinate:

2L:9570633-9570674 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dsim\GD23631-cds]; exon [dsim_GLEANR_7366:5]

No Repeatable elements found

Sense Strand Reads

##############################################################################################################################################
 GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACACGCCTACCGACTGATCTGCAAGGAACCGCAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCACAGCACTTTATTGAGC
***********************************...(((((((..((..(((...(((((((((........)))))....))))...)))..))..)))))))************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 O001
Testis
 M023
head
 O002
Head
 M024
male body
 SRR553486
Ovary		 SRR553487
Ovary		 M025
embryo
 M053
Female-body		 SRR553488
Ovary		 SRR618934
Ovary		 GSM343915
embryo
..................................................CTACCGACTGATCTGCAAGG........................................................................ 20 0 2 7.50 15 1 0 8 0 4 0 0 2 0 0 0 0
...............................................................................................................CAGGAGATGCAATCACAGCAC.......... 21 0 2 3.00 6 0 4 0 2 0 0 0 0 0 0 0 0
...................................................TACCGACTGATCTGCAAGG........................................................................ 19 0 2 3.00 6 0 0 4 0 1 1 0 0 0 0 0 0
........GCGCAAACGGATCTCAGGACT................................................................................................................. 21 0 2 2.00 4 3 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................CCGCCTACTTTGGAATACAGG........................... 21 0 2 2.00 4 0 4 0 0 0 0 0 0 0 0 0 0
...............CGGATCTCAGGACTGGAGGAT.......................................................................................................... 21 0 2 2.00 4 1 0 0 2 0 0 0 0 1 0 0 0
...............................................................TGCAAGGAACCGCAGACCGCTCAGA...................................................... 25 0 2 2.00 4 1 0 0 0 0 2 0 0 0 1 0 0
....................................................ACCGACTGATCTGCAAGGAAC..................................................................... 21 0 2 1.50 3 1 0 1 0 1 0 0 0 0 0 0 0
................................................................................................................AGGAGATGCAATCACAGCACT......... 21 0 2 1.50 3 0 2 0 0 1 0 0 0 0 0 0 0
.......TGCGCAAACGGATCTCAGGACTGGAGGA........................................................................................................... 28 0 2 1.50 3 2 0 0 0 0 1 0 0 0 0 0 0
.............AACGGATCTCAGGACTGGAGG............................................................................................................ 21 0 2 1.50 3 2 0 0 0 0 0 0 0 0 0 1 0
..................................................CTACCGACTGATCTGCAAGGA....................................................................... 21 0 2 1.50 3 2 0 1 0 0 0 0 0 0 0 0 0
..................ATCTCAGGACTGGAGGATAGC....................................................................................................... 21 0 2 1.50 3 0 2 0 0 0 0 1 0 0 0 0 0
..........................................................................GCAGACCGCTCAGATAGTGCCCGCCT.......................................... 26 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...............CGGATCTCAGACCTGGAGGAT.......................................................................................................... 21 2 2 1.00 2 0 0 0 0 0 2 0 0 0 0 0 0
.............................................CACGCCTACCGACTGATCTGCAAGGA....................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................TCAGGACTGGAGGATAGCGAA.................................................................................................... 21 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
..................................................................AAGGAACCGCAGACCGCTCAG....................................................... 21 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
......................................................................AACCGCAGACCGCTCAGATAG................................................... 21 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.......................................................................................ATAGTGCCCGCCTACTTTGGA.................................. 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................ACCGACTGATCTGCAAGG........................................................................ 18 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.................GATCTCAGGACTGGAGGATAG........................................................................................................ 21 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...........CAAACGGATCTCAGGACT................................................................................................................. 18 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................TGCAAGGAACCGCAGACCGCTC......................................................... 22 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
........................................................ACTGATCTGCAAGGAACC.................................................................... 18 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...........................................TACACGCCTACCGACTGATCTGCAAGGAAC..................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................AGTACACGCCTACCGACTGATC............................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................CGCCTACCGACTGATCTGCA........................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................TGCAAGGAACCGCAGACC............................................................. 18 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...............CGGATCTCAGGACTGGAGGA........................................................................................................... 20 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...............................AGGATAGCGAAGTGCACGCCTA......................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.......................AGGACTGGAGGATAGCGAAGTACACG............................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TACTTTGGAATACAGGAGA........................ 19 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AGATGCAATCACAGCACTTTA...... 21 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.....................................................................GAACCGCAGACCGCTCAGATA.................................................... 21 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
.............AACGGATCTCAGGACTGGAGTC........................................................................................................... 22 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................CTACCGACTGATCTGCA........................................................................... 17 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................ACTGGAGGATAGCGAAGTA................................................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..........GCAAACGGATCTCAGGACTGG............................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
....TAGTGCGCAAACGGATCTCAGGA................................................................................................................... 23 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
...ATAGTGCGCAAACGGATCTCAA..................................................................................................................... 22 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................................CCGACTGATCTGCAAGGAACC.................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................TCAGATAGTGCCCGCCTACTTTGGAA................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
........GCGCAAACGGATCTCAGGAC.................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................CTGATCTGCAAGGAACCGC.................................................................. 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CTCAGATAGTGCCCGCCTACT....................................... 21 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................AGGAACCGCAGACCGCTCAGATAGTGCC............................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................AGATGCAATCACAGCACTTTATTGAGC 27 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
....TAGTGCGCAAACGGATCTCAGGACTGG............................................................................................................... 27 0 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
.........CGCAAACGGATCTCAGGACTGT............................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................TCAGGACTGGAGGATAGC....................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................TGCCCGCCTACTTTGGAATACAGGA.......................... 25 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
...ATAGTGCGCAAACGGATCTCAGGACT................................................................................................................. 26 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................CGCAGACCGCTCAGATAG................................................... 18 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................TACCGACTGATCTGCAAGGAACCG................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................CGCCTACTTTGGAATACAGGA.......................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TACCGACTGATCTGCAAGGAACCGC.................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.......TGCGCAAACGGATCTCAGGAC.................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..........GCAAACGGATCTCAGGACTGGAGGA........................................................................................................... 25 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
....................CTCAGGACTGGAGGATAGCG...................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................TACCGACTGATCTGCAAGGAACC.................................................................... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................TACCGACTGATCTGCAAGGAA...................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................ACCGACTGATCTGCAAGGAACCGCA................................................................. 25 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
.......................AGGACTGGAGGATAGCGAAGT.................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
............AAACGGATCTCAGGACTGGAG............................................................................................................. 21 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................CGCAGACCGCTCAGATA.................................................... 17 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
...................TCTCAGGACTGGAGGC........................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
...............................................................................................CGCGTACTTTGGAATA............................... 16 1 3 0.33 1 0 0 0 0 0 0 0 0 0 1 0 0
..................................................CTACCGACTGATCTGCTGG......................................................................... 19 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................GCAAGGAACCGCAGT............................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 1 0
..................ATCTCAGTACCGGAGGA........................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0 0
......................................................................................................................TGCAATCACAGCACG......... 15 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 1 0
..................ATCTCAGTACCGGAGGAAA......................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

##############################################################################################################################################
 GCTCAATAAAGTGCTGTGATTGCATCTCCTGTATTCCAAAGTAGGCGGGCACTATCTGAGCGGTCTGCGGTTCCTTGCAGATCAGTCGGTAGGCGTGTACTTCGCTATCCTCCAGTCCTGAGATCCGTTTGCGCACTATTCC
************************************(((((((..((..(((...((((....(((((........)))))))))...)))..))..)))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 SRR553487
Ovary		 SRR553486
Ovary		 M023
head
 M024
male body
 SRR618934
Ovary		 O001
Testis
 M053
Female-body		 O002
Head
 M025
embryo
 SRR553488
Ovary
.................................................................................TCAGTCGGTAGGCGTGTACTTCGCTA................................... 26 0 1 8.00 8 6 2 0 0 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGTCGGTAGGCGTG............................................. 27 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0 0
.................................................................TGCGGTTCCTTGCAGATCAGTCGGTA................................................... 26 0 2 6.00 12 9 2 1 0 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGTCGGTA................................................... 21 0 2 5.50 11 0 3 1 5 1 1 0 0 0 0 0
..............................................GGGCACTATCTGAGCGGTCTGCGGT....................................................................... 25 0 2 4.50 9 6 0 3 0 0 0 0 0 0 0 0
..............................................................................................................TCCAGTCCTGAGATCCGTTTGCGCAC...... 26 0 2 4.00 8 4 1 1 0 0 0 0 0 0 2 0
.....................................................................................................................CTGAGATCCGTTTGCGCACTA.... 21 0 2 3.50 7 0 0 0 3 2 0 0 0 2 0 0
.............................................CGGGCACTATCTGAGCGGTCT............................................................................ 21 0 2 3.00 6 1 2 0 2 0 0 0 0 0 0 1
......................................................TCTGAGCGGTCTGCGGTTCCT................................................................... 21 0 2 3.00 6 2 0 0 1 3 0 0 0 0 0 0
.............................................CGGGCACTATCTGAGCGGTCTGCGGT....................................................................... 26 0 2 3.00 6 3 1 2 0 0 0 0 0 0 0 0
...............................................GGCACTATCTGAGCGGTCTGC.......................................................................... 21 0 2 2.50 5 0 1 0 1 2 1 0 0 0 0 0
.................................................................TGCGGTTCCTTGCAGATCAGTCGGTAGG................................................. 28 0 2 2.50 5 4 0 1 0 0 0 0 0 0 0 0
............................................GCGGGCACTATCTGAGCGGTC............................................................................. 21 0 2 2.50 5 1 0 1 1 2 0 0 0 0 0 0
.................................................................................................TACTTCGCTATCCTCCAGTCCTGAGA................... 26 0 2 2.50 5 3 0 1 0 0 0 0 1 0 0 0
.............................................CGGACCCGATCTGAGCGGT.............................................................................. 19 3 18 2.28 41 0 0 41 0 0 0 0 0 0 0 0
....................................................................GGTTCCTTGCAGATCAGTCGGTAGGCGTG............................................. 29 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................TCAGTCGGTAGGCGTGTACTTCGCTT................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
....................................................................................GTCGGTAGGCGTGTACTTCGC..................................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.......................................................................TCCTTGCAGATCAGTCGGTAGGCGTGT............................................ 27 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
.......................................................................TCCTTGCAGATCAGTCGGTAGGCGTG............................................. 26 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0
.................................................................TGCGGTTCCTTGCAGATCAGTCGGT.................................................... 25 0 2 2.00 4 2 0 2 0 0 0 0 0 0 0 0
...........................................................................TGCAGATCAGTCGGTAGGCGTGTACTT........................................ 27 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
...............................................GGCACTATCTGAGCGGTCTGCGGT....................................................................... 24 0 2 1.50 3 0 0 3 0 0 0 0 0 0 0 0
..................................TCCAAAGTAGGCGGGCACTATCTGAGC................................................................................. 27 0 2 1.50 3 1 0 2 0 0 0 0 0 0 0 0
......................................................TCTGAGCGGTCTGCGGTTCCTTGCAGA............................................................. 27 0 2 1.50 3 2 1 0 0 0 0 0 0 0 0 0
.................................................CACTATCTGAGCGGTCTGCGGTTCCT................................................................... 26 0 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0
..........................................................................TTGCAGATCAGTCGGTAGGC................................................ 20 0 2 1.50 3 2 0 0 0 1 0 0 0 0 0 0
....................................................................................................................CCTGAGATCCGTTTGCGCACT..... 21 0 2 1.50 3 2 0 0 0 1 0 0 0 0 0 0
................................ATTCCAAAGTAGGCGGGCACT......................................................................................... 21 0 2 1.50 3 0 0 0 2 1 0 0 0 0 0 0
......................................................................................................................TGAGATCCGTTTGCGCACTAT... 21 0 2 1.50 3 0 1 0 0 0 0 2 0 0 0 0
.....................................................................................................................CTGAGATCCGTTTGCGCACTAT... 22 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0
..........................................................................TTGCAGATCAGTCGGTAGGCGTGTACTT........................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TCCAGTCCTGAGATCCGTTTGC.......... 22 0 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0
......................................................................................................CGCTATCCTCCAGTCCTGAGA................... 21 0 2 1.00 2 0 0 2 0 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGTCGGTAGGCG............................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................ACTATCTGAGCGGTCTGCGGT....................................................................... 21 0 2 1.00 2 1 0 0 0 0 1 0 0 0 0 0
...............................................GGCACTATCTGAGCGGTCTG........................................................................... 20 0 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0
..................................................................................................................GTCCTGAGATCCGTTTGC.......... 18 0 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0
.............................................................................CAGATCAGTCGGTAGGCGTGT............................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................GCGTGTACTTCGCTATCCTCC............................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................CCAAAGTAGGCGGGCACTATC...................................................................................... 21 0 2 1.00 2 0 1 0 0 1 0 0 0 0 0 0
.................................................................................TCAGTCGGTAGGCGTGTACTTCGCT.................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................GAGCGGTCTGCGGTTCCTTGC................................................................ 21 0 2 1.00 2 0 0 0 0 0 0 0 0 2 0 0
........................................................TGAGCGGTCTGCGGTTCCTTGCAGA............................................................. 25 0 2 1.00 2 0 0 0 0 0 2 0 0 0 0 0
..............................................................................................GTGTACTTCGCTATCCTCCA............................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...........................................................................TGCAGATCAGTCGGTAGGCGTG............................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................CAGTCGGTAGGCGTGTACTTCGCTA................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............GTGATTGCATCTCCTGTATTCC......................................................................................................... 22 0 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0
...........................................................................TGCAGATCAGTCGGTAGGCGT.............................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................GGTTCCTTGCAGATCAGTCGG..................................................... 21 0 2 1.00 2 1 0 1 0 0 0 0 0 0 0 0
................................................................................ATCAGTCGGTAGGCGTGTACTTCGC..................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TCCTGAGATCCGTTTGCGCAC...... 21 0 2 1.00 2 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................CTCCAGTCCTGAGATCCGTTT............ 21 0 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TAGGCGTGTACTTCGCTATCCTCCAGTCC........................ 29 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...............................................................................................TGTACTTCGCTATCCTCCAGTC......................... 22 0 2 1.00 2 0 0 0 0 0 0 2 0 0 0 0
..........................................................................TTGCAGATCAGTCGGTAGGCGT.............................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGTCGGTAGGCGTGTACTT........................................ 32 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TCCTCCAGTCCTGAGATCCGTTTGC.......... 25 0 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0
.................................................................................TCAGTCGGTAGGCGTGTACTTCTCTATC................................. 28 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
...........................................GGCGGGCACTATCTGAGCGGT.............................................................................. 21 0 2 1.00 2 1 1 0 0 0 0 0 0 0 0 0
....................TGCATCTCCTGTATTCCAAAGTAGGCGGG............................................................................................. 29 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................TCAGTCGGTAGGCGTGTACTTCGC..................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................CTATCTGAGCGGTCTGCGGTT...................................................................... 21 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGTCGGTT................................................... 21 1 2 1.00 2 0 0 0 2 0 0 0 0 0 0 0
...........................................................................................................TCCTCCAGTCCTGAGATCCGTT............. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................GCAGTTCAGTCGGTAGA................................................. 17 2 12 0.50 6 0 0 0 0 0 6 0 0 0 0 0
............................CTGGATTCCAAAGTAGGCGGGCT........................................................................................... 23 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
......................................................TCTGAGCGGTCTGCGGTTCCTTGC................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GTCCTGAGATCCGTTTGCGCA....... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................GCGGGCACTGTCTGAGCGGTC............................................................................. 21 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................GTTCCCTGCAGATCAGTCGG..................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTGCAGATCAGTCGGTT................................................... 22 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.........................................TAGGCGGGCACTATCTGAGCGGTCTG........................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.............................TGTATTCCAAAGTAGGCGGGC............................................................................................ 21 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................GGTTCCTTGCAGATCAGTCGGTA................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
................TGATTGCATCTCCTGTATTCC......................................................................................................... 21 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0
...................TTGCATCTCCTGTATTCCA........................................................................................................ 19 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.CTCAATAAAGTGCTGTGATTG........................................................................................................................ 21 0 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0
...............................................GGCACTATCTGAGCGGTCTGG.......................................................................... 21 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
.............................................CGGGCACTATCTGAGCGGTCTG........................................................................... 22 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
..................................TCCAAAGTAGGCGGGCACTATCTGA................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TCCTGAGATCCGTTTGCGCACTATT.. 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
...................TTGCATCTCCTGTATTCCAAAGTAGGC................................................................................................ 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................CAGTCCTGAGATCCGTTTGCGCAC...... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................CAGTTCAGTCGGTAGA................................................. 16 2 20 0.50 10 0 0 0 0 0 10 0 0 0 0 0
.................................................................................................TACTTCGCTATCCTCCAGGTCTGAGA................... 26 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
......TAAAGTGCTGTGATTGCATCTCCTGTA............................................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...................................................CTATCTGAGCGGTCTGCGGTTT..................................................................... 22 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
........................................................TGAGCGGTCTGTGGTTCCTTGC................................................................ 22 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................AGGTCCGTTTGCGCACTATT.. 20 1 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
.................................TTCCAAAGTAGGCGGGCACTA........................................................................................ 21 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
..........................................AGGCGGGCACTATCTGAGCGG............................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
......................................................TCTGAGCGGTCTGCGGTTCCTTGCA............................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.............................................CGGGCACTATCTGAGCGGTC............................................................................. 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................CTTGCAGATCAGTCGGTAGG................................................. 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGTCGG..................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................AGTCCTGAGATCCGTTTGCGC........ 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGT........................................................ 16 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................GTCTGAGATCCGTTTGCGCACTAT... 24 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.................................TTCCAAAGTAGGCGGGCACTATCTGAGC................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..................................................ACTATCTGAGCGGTCTGCGGTT...................................................................... 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................ATCCTCCAGTCCTGAGATCCGTTTGCGCAC...... 30 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..............................GTATTCCAAAGTAGGCGGGCT........................................................................................... 21 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
...........................................GGCGGGCACTATCTGAGCGGTCTGCGGT....................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................GCGGGCACTATCTGAGCGGTCTGTG......................................................................... 25 1 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
.................................................................TGCGGTTCCTTGCAGATCAGTCG...................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................CTTGCAGATCAGTCGGTAGGC................................................ 21 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
................................................GCACTATCTGAGCGGTCTGCG......................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
...................................................CTATCTGAGCGGTCTGCGGTTCCT................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................CCTGAGATCCGTTTGCGCACTA.... 22 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................TTCGCTATCCTTCAGTCCTGA..................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
........................................GTAGGCGGGCACTATCTGAGC................................................................................. 21 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................GGTTCCTTGCAGATCAGTCGGTT................................................... 23 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................CCTTGCAGATCAGTCGGTA................................................... 19 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................TGCGGTTCCTTGCAGATCAGTC....................................................... 22 0 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1
.............................................CGGGCACTATCTGAGCGGTCTGCG......................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................CTGTATTCCAAAGTAGGCGGGC............................................................................................ 22 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................TCTGCGGTTCCTTGCAGATCAGTCGGTA................................................... 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
...............................TATTCCAAAGTAGGCGGGCAC.......................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TGAGATCCGTTTGCGCACT..... 19 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................TACTTCGCTATCCTCCAGT.......................... 19 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
..........................................AGGCGGGCACTATCTGAGCGGTCTG........................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.......................................AGTAGGCGGGCACTATCTGAGCGG............................................................................... 24 0 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................GTTCCTTGCAGATCAGTCGGTAGGC................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................TGCGGTTCCTTGCAGATCAGTCGG..................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GTCCTGAGATCCGTTTGCGCACTATT.. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................TTCCTTGCAGATCAGTCGGT.................................................... 20 0 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
..TCAATAAAGTGCTGTGATTGC....................................................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................CAGTTCAGTCGGTAG.................................................. 15 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................GCAGTTCAGTCGGTA................................................... 15 1 8 0.25 2 0 0 0 0 0 2 0 0 0 0 0
...........TCCTGTGATTGCATCGCTTG............................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0
............................................GCGGACCCGATCTGAGCGGT.............................................................................. 20 3 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................GCAGCTCAGTCGGTAGAC................................................ 18 2 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................CTGCAGTTCAGTCGGTAGA................................................. 19 3 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0
........................................................TGAGCGGTCTAAGGCTCCT................................................................... 19 3 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................AATCCTGAGATCCGCTTTCG......... 20 3 18 0.06 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................CGGCAGCTCAGTCGGTAGG................................................. 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 2L:9570583-9570724 + dsi_95 GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACACGCCTACCGACTGATCTGCAAGGAACCGCAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCACAGCACTTTATTGAGC
droSec2 scaffold_3:5234780-5234921 + GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGACTGATCTGCAAGGAACCGCAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCACAGCACTTTATTGAGC
dm3 chr2L:9787371-9787512 + GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGACTGATCTGCAAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCACAGCACTTTATTGAGC
droEre2 scaffold_4929:10399383-10399524 + GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGATTGATCTGCAAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCGCAGTACTTCATTGAAC
droYak3 2L:12475912-12476053 + GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTGCATGCCTACCGATTGATCTGCCAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCGCAGCACTTCATTGAGT
droEug1 scf7180000409554:5140325-5140466 - GGAATAGTGCGCAAACGCATCTCGGGATTCGAGGACAGCGAGGTGAAAGCTTATCGATTGATCTGCCAAGAACCACAGACCGCCCAGATAGTACCCGCTTACTTTGGAATACAAGAAGTGCAGGCCCAACAATACATTGAAC
droBia1 scf7180000302408:3361833-3361974 - GGAATAGTGCGGAAGAGGATCTCGGGCCTCGAGGACAGCGAGGTCCATGCCTACCGGCTGATCTGCCAGGAGCCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGCATACAGGAGATGCAGGCGCAGCACTACATTGAGC
droTak1 scf7180000415880:54786-54927 - GGAATAGTGCGCAAACGGATCTCGGGCTTCGAGGACAGCGAGGTGAAGGCCTACCGGCTGATCTGCCAGGAGCCACAGACCGCACAGATAGTGCCCGCCTACTTTGGGATTCAGGAGATGCAGTCGCAGCACTACATTGAGC
droEle1 scf7180000491186:2824857-2824998 + GGCATTGTCCGTAAACGCATCACGGGCTTCGAGGACAGCGAGGTGCAAGCCTACCGACTGATCTGCCAGGAGCCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGGTGCAGGCACAGCACTACATTGAGC
droRho1 scf7180000778085:136615-136756 - GGAATAGTCCGCAAACGCATTTCCGGCTTCGAGGACAGCGAGGTGCATGCCTACCGACTAATCTGCCAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGGATGCAGGAGATCCAGGCGCAGCACTACATTGAAC
droFic1 scf7180000454144:192115-192256 + GGAATAGTGCGCAAACGCATCACAGGTTTCGATGACAACGAGATGCATGCCTACCAACTGATCTGCCAGGAACCACAGACCGCCCAGATCGTTCCCGCCTACTATGGAATGCAGGAGATTCAGGCGCAGCACTACATTGAGC
droKik1 scf7180000302472:2157394-2157535 + GGAATCGTGCGAAAGCGGATTGCCGGTTTTCAGGATAGCGAGGTCCATGCCTATCGGCTGATTTGCCAGGAGCCGCAGACAGCCCAGATTGTGCCCGCCTACTTTGGGATGCGGGAGATGCAGTCGCAACACTACATCGAGC
droAna3 scaffold_12943:1227468-1227609 + GGAATTGTGCGGAAACGCATCGCCGGTGTCGAGGACAGCGAAGTGCGCGCCTACAGACTCATCTGCCAGGAGCCGCAGACGGCTCAGATAGTGCCCGCCTACTTTGGGATGCGGGAGTTGCAGGGACAGCACTACATCGAGC
droBip1 scf7180000396728:1970643-1970784 - GGTATTGTGCGGAAACGCATCGCTGGTGTCGAGGACAGCGAAGTGCGGGCCTACAGACTCATCTGCCAGGAGCCGCAGACGGCTCAGATAGTGCCCGCCTACTTTGGGATGCGAGAGCTGCAGGGACAGCACTACATCGAGC
dp5 4_group3:383458-383599 - GGAATTGTGCGGAAGCGCATCGTGGGCATCGATGACAGCGAGGTGCATGCCTACCGCATGATCTGCCAGGAGCCACAGACGGCGCAGATTGTGCCCGCGTACTTCGGTATGCGGGAGATGCAGTCGCAGCACTACATCGAGC
droPer2 scaffold_1:1859267-1859408 - GGAATTGTGCGGAAGCGCATCGTGGGCATCGATGACAGCGAGGTGCATGCCTACCGCATGATCTGCCAGGAGCCACAGACGGCGCAGATTGTGCCCGCGTACTTCGGTATGCGGGAGATGCAGTCGCAGCACTACATCGAGC
droWil2 scf2_1100000004585:8429800-8429941 + GGTATAGTGCGAAAACGTATTAAGAGTCTGGATGATAGTGAAGTCCATGCCTATCAATTGATCTCCCAAGAGCCACAAACCTCACAGATAGTTCCCGCATATTTTGGCTTGAGGGAATTGCAATCTCAACATTATATCGAGC
droVir3 scaffold_12963:1825386-1825527 - GGCATTGTGCGCAAACGCATCGTTGGCATCGATGACAGCGAGGTGCTTGCCTATCAGATGATCTCGCAGGAGCCCAAAACTTCACAGATTGTGCCCGGCTACTTTGGACTGCGCGAGCTGCATTCACAGCACTATATCGAGC
droMoj3 scaffold_6500:28770196-28770337 - GGAATTGTGCGCAAGCGGATCGCTGGCATCGAGGACAGCGAGGTGTTGGCCTATCAGCAGATCTCGCAGGAGCCGAAGACCTCACAGATTGTGCCCGCCTACTTTGGATTGCGGGAACTGCAGGGACAGCACTATATCGAGC
droGri2 scaffold_15126:6708681-6708822 + GGCATTGTGCGTAAGCGCATTGTTGGCATCGAGGACAGCGAGGTGCTTGCCTATCGTCAGATCTCGCAGGAGCCAAAGACCTCGCAGATTGTGCCCGCCTTTTATGGACTGCGCGAGATGCACTCACAGCATTTTATTGAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACACGCCTACCGACTGATCTGCAAGGAACCGCAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCACAGCACTTTATTGAGCSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
..................................................CTACCGACTGATCTGCAAGG........................................................................2027.5015084200010000
...............................................................................................................CAGGAGATGCAATCACAGCAC..........2123.006000042000000
...................................................TACCGACTGATCTGCAAGG........................................................................1923.006041000001000
........GCGCAAACGGATCTCAGGACT.................................................................................................................2122.004000000031000
..............................................................................................CCGCCTACTTTGGAATACAGG...........................2122.004000040000000
...............CGGATCTCAGGACTGGAGGAT..........................................................................................................2122.004000002110000
...............................................................TGCAAGGAACCGCAGACCGCTCAGA......................................................2522.004000000012010
....................................................ACCGACTGATCTGCAAGGAAC.....................................................................2121.503011000010000
................................................................................................................AGGAGATGCAATCACAGCACT.........2121.503001020000000
.......TGCGCAAACGGATCTCAGGACTGGAGGA...........................................................................................................2821.503000000021000
.............AACGGATCTCAGGACTGGAGG............................................................................................................2121.503000000020001
..................................................CTACCGACTGATCTGCAAGGA.......................................................................2121.503010000020000
..................ATCTCAGGACTGGAGGATAGC.......................................................................................................2121.503000020000100
..........................................................................GCAGACCGCTCAGATAGTGCCCGCCT..........................................2621.002000002000000
.............................................CACGCCTACCGACTGATCTGCAAGGA.......................................................................2611.001000000010000
.....................TCAGGACTGGAGGATAGCGAA....................................................................................................2121.002000020000000
..................................................................AAGGAACCGCAGACCGCTCAG.......................................................2121.002000002000000
......................................................................AACCGCAGACCGCTCAGATAG...................................................2121.002000020000000
.......................................................................................ATAGTGCCCGCCTACTTTGGA..................................2121.002000000020000
....................................................ACCGACTGATCTGCAAGG........................................................................1821.002020000000000
.................GATCTCAGGACTGGAGGATAG........................................................................................................2121.002000020000000
...........CAAACGGATCTCAGGACT.................................................................................................................1821.002000020000000
...............................................................TGCAAGGAACCGCAGACCGCTC.........................................................2221.002000002000000
........................................................ACTGATCTGCAAGGAACC....................................................................1821.002000002000000
...........................................TACACGCCTACCGACTGATCTGCAAGGAAC.....................................................................3011.001000000010000
.........................................AGTACACGCCTACCGACTGATC...............................................................................2211.001000010000000
...............................................CGCCTACCGACTGATCTGCA...........................................................................2011.001000000010000
...............................................................TGCAAGGAACCGCAGACC.............................................................1821.002000020000000
...............CGGATCTCAGGACTGGAGGA...........................................................................................................2021.002000002000000
.......................AGGACTGGAGGATAGCGAAGTACACG.............................................................................................2611.001000000010000
...................................................................................................TACTTTGGAATACAGGAGA........................1921.002000020000000
...................................................................................................................AGATGCAATCACAGCACTTTA......2121.002000020000000
.....................................................................GAACCGCAGACCGCTCAGATA....................................................2120.501000000001000
..................................................CTACCGACTGATCTGCA...........................................................................1720.501000000000001
..........................ACTGGAGGATAGCGAAGTA.................................................................................................1920.501000000010000
..........GCAAACGGATCTCAGGACTGG...............................................................................................................2120.501000000100000
....TAGTGCGCAAACGGATCTCAGGA...................................................................................................................2320.501000000000100
.....................................................CCGACTGATCTGCAAGGAACC....................................................................2120.501000000010000
...................................................................................TCAGATAGTGCCCGCCTACTTTGGAA.................................2620.501000000010000
........GCGCAAACGGATCTCAGGAC..................................................................................................................2020.501000000010000
.........................................................CTGATCTGCAAGGAACCGC..................................................................1920.501000000010000
..................................................................................CTCAGATAGTGCCCGCCTACT.......................................2120.501001000000000
...................................................................AGGAACCGCAGACCGCTCAGATAGTGCC...............................................2820.501000000010000
...................................................................................................................AGATGCAATCACAGCACTTTATTGAGC2720.501100000000000
....TAGTGCGCAAACGGATCTCAGGACTGG...............................................................................................................2720.501000000000100
.....................TCAGGACTGGAGGATAGC.......................................................................................................1820.501000000010000
...........................................................................................TGCCCGCCTACTTTGGAATACAGGA..........................2520.501000000001000
...ATAGTGCGCAAACGGATCTCAGGACT.................................................................................................................2620.501001000000000
.........................................................................CGCAGACCGCTCAGATAG...................................................1820.501010000000000
...................................................TACCGACTGATCTGCAAGGAACCG...................................................................2420.501000000010000
...............................................................................................CGCCTACTTTGGAATACAGGA..........................2120.501000000010000
...................................................TACCGACTGATCTGCAAGGAACCGC..................................................................2520.501000000010000
.......TGCGCAAACGGATCTCAGGAC..................................................................................................................2120.501000000010000
..........GCAAACGGATCTCAGGACTGGAGGA...........................................................................................................2520.501000000001000
....................CTCAGGACTGGAGGATAGCG......................................................................................................2020.501000000010000
...................................................TACCGACTGATCTGCAAGGAACC....................................................................2320.501010000000000
...................................................TACCGACTGATCTGCAAGGAA......................................................................2120.501010000000000
....................................................ACCGACTGATCTGCAAGGAACCGCA.................................................................2520.501001000000000
.......................AGGACTGGAGGATAGCGAAGT..................................................................................................2120.501000000010000
............AAACGGATCTCAGGACTGGAG.............................................................................................................2120.501000000000010
.........................................................................CGCAGACCGCTCAGATA....................................................1720.501000000001000
droSec2
GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGACTGATCTGCAAGGAACCGCAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCACAGCACTTTATTGAGCSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
..................ATCTCAGGACTGGAGGATAGC.......................................................................................................2112.0022000
.............AACGGATCTCAGGACTGGAGG............................................................................................................2111.0010001
..................................................................................CTCAGATAGTGCCCGCCTACT.......................................2111.0010010
..............................................................................................CCGCCTACTTTGGAATACAGG...........................2111.0010010
...............................................................................................................CAGGAGATGCAATCACAGCAC..........2111.0011000
.....................................................................................................CTTTGGAATACAGGAGATGC.....................2011.0011000
......................................................................................................TTTGGAATACAGGAGATGCA....................2011.0011000
..................................................................................................CTACTTTGGAATACAGGAGAT.......................2111.0010010
..................................................CTACCGACTGATCTGCAAGG........................................................................2011.0011000
droEre2
GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTACATGCCTACCGATTGATCTGCAAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCGCAGTACTTCATTGAACSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
...................TCTCAGGACTGGAGGATAGCGAAGT..................................................................................................2511.001001000
.....................................GCGAAGTACATGCCTACCGAT....................................................................................2111.001000010
.................................GATAGCGAAGTACATGCCTACCGATTGA.................................................................................2811.001000010
............AAACGGATCTCAGGACTGGAGGA...........................................................................................................2311.001000100
..................................................CTACCGATTGATCTGCAAGGA.......................................................................2111.001000010
.............................................................................GACCGCTCAGATAGTGCCC..............................................1911.001000001
droYak3
GGAATAGTGCGCAAACGGATCTCAGGACTGGAGGATAGCGAAGTGCATGCCTACCGATTGATCTGCCAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGATGCAATCGCAGCACTTCATTGAGTSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
....................CTCAGGACTGGAGGATAGCGAAGT..................................................................................................2411.0010010000
..........GCAAACGGATCTCAGGACTGGAGGATAGC.......................................................................................................2911.0010010000
...ATAGTGCGCAAACGGATCTCAGG....................................................................................................................2311.0010010000
droEug1
GGAATAGTGCGCAAACGCATCTCGGGATTCGAGGACAGCGAGGTGAAAGCTTATCGATTGATCTGCCAAGAACCACAGACCGCCCAGATAGTACCCGCTTACTTTGGAATACAAGAAGTGCAGGCCCAACAATACATTGAACSizeHit CountTotal NormTotal
No Reads
droBia1
GGAATAGTGCGGAAGAGGATCTCGGGCCTCGAGGACAGCGAGGTCCATGCCTACCGGCTGATCTGCCAGGAGCCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGCATACAGGAGATGCAGGCGCAGCACTACATTGAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GGAATAGTGCGCAAACGGATCTCGGGCTTCGAGGACAGCGAGGTGAAGGCCTACCGGCTGATCTGCCAGGAGCCACAGACCGCACAGATAGTGCCCGCCTACTTTGGGATTCAGGAGATGCAGTCGCAGCACTACATTGAGCSizeHit CountTotal NormTotal
No Reads
droEle1
GGCATTGTCCGTAAACGCATCACGGGCTTCGAGGACAGCGAGGTGCAAGCCTACCGACTGATCTGCCAGGAGCCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGAATACAGGAGGTGCAGGCACAGCACTACATTGAGCSizeHit CountTotal NormTotal
No Reads
droRho1
GGAATAGTCCGCAAACGCATTTCCGGCTTCGAGGACAGCGAGGTGCATGCCTACCGACTAATCTGCCAGGAACCACAGACCGCTCAGATAGTGCCCGCCTACTTTGGGATGCAGGAGATCCAGGCGCAGCACTACATTGAACSizeHit CountTotal NormTotal
No Reads
droFic1
GGAATAGTGCGCAAACGCATCACAGGTTTCGATGACAACGAGATGCATGCCTACCAACTGATCTGCCAGGAACCACAGACCGCCCAGATCGTTCCCGCCTACTATGGAATGCAGGAGATTCAGGCGCAGCACTACATTGAGCSizeHit CountTotal NormTotal
No Reads
droKik1
GGAATCGTGCGAAAGCGGATTGCCGGTTTTCAGGATAGCGAGGTCCATGCCTATCGGCTGATTTGCCAGGAGCCGCAGACAGCCCAGATTGTGCCCGCCTACTTTGGGATGCGGGAGATGCAGTCGCAACACTACATCGAGCSizeHit CountTotal NormTotal
No Reads
droAna3
GGAATTGTGCGGAAACGCATCGCCGGTGTCGAGGACAGCGAAGTGCGCGCCTACAGACTCATCTGCCAGGAGCCGCAGACGGCTCAGATAGTGCCCGCCTACTTTGGGATGCGGGAGTTGCAGGGACAGCACTACATCGAGCSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
..AATTGTGCGGAAACGCATCGCCGGTGT.................................................................................................................2711.001000100
....................CGCCGGTGTCGAGGACAGCGAAGTGCGC..............................................................................................2811.001100000
droBip1
GGTATTGTGCGGAAACGCATCGCTGGTGTCGAGGACAGCGAAGTGCGGGCCTACAGACTCATCTGCCAGGAGCCGCAGACGGCTCAGATAGTGCCCGCCTACTTTGGGATGCGAGAGCTGCAGGGACAGCACTACATCGAGCSizeHit CountTotal NormTotal
No Reads
dp5
GGAATTGTGCGGAAGCGCATCGTGGGCATCGATGACAGCGAGGTGCATGCCTACCGCATGATCTGCCAGGAGCCACAGACGGCGCAGATTGTGCCCGCGTACTTCGGTATGCGGGAGATGCAGTCGCAGCACTACATCGAGCSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
.GAATTGTGCGGAAGCGCATCGTGGGC...................................................................................................................2612.0020100010
..................................................................................................................GAGATGCAGTCGCAGCACTAC.......2111.0010000100
....................CGTGGGCATCGATGACAGCGAG....................................................................................................2211.0010000100
.........................................................................CACAGACGGCGCAGATTGTGCCCGC............................................2511.0010000010
..............GCGCATCGTGGGCATCGATGACA.........................................................................................................2311.0010000100
..........GGAAGCGCATCGTGGGCATCG...............................................................................................................2111.0010000100
........................................................................................................CGGTATGCGGGAGATGCAGT..................2011.0011000000
....................................................................................................ACTTCGGTATGCGGGAGATGC.....................2111.0010100000
............................................................ATCTGCCAGGAGCCACAGAC..............................................................2011.0011000000
..........................................................................................................................GTCGCAGCACTACATCGAGC2011.0010001000
.......................GGGCATCGATGACAGCGAGG...................................................................................................2011.0011000000
............................TCGATGACAGCGAGGTGCA...............................................................................................1911.0010100000
..............................................ATGCCTACCGCATGATCTGCCAGG........................................................................2411.0010000100
.................................GACAGCGAGGTGCATGCCTACCGCATGAT................................................................................2911.0010100000
..................................................................................................GTACTTCGGTATGCGGGA..........................1811.0010000100
droPer2
GGAATTGTGCGGAAGCGCATCGTGGGCATCGATGACAGCGAGGTGCATGCCTACCGCATGATCTGCCAGGAGCCACAGACGGCGCAGATTGTGCCCGCGTACTTCGGTATGCGGGAGATGCAGTCGCAGCACTACATCGAGCSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
..................................................................CAGGAGCCACAGACGGCGCAG.......................................................2111.001000001
droWil2
GGTATAGTGCGAAAACGTATTAAGAGTCTGGATGATAGTGAAGTCCATGCCTATCAATTGATCTCCCAAGAGCCACAAACCTCACAGATAGTTCCCGCATATTTTGGCTTGAGGGAATTGCAATCTCAACATTATATCGAGCSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
...ATAGTGCGAAAACGTATT.........................................................................................................................1811.00101000
......................................................................................................TTTGGCTTGAGGGAATTGC.....................1911.00110000
.........................................................................................................GGCTTGAGGGAATTGCAATCTC...............2211.00100100
droVir3
GGCATTGTGCGCAAACGCATCGTTGGCATCGATGACAGCGAGGTGCTTGCCTATCAGATGATCTCGCAGGAGCCCAAAACTTCACAGATTGTGCCCGGCTACTTTGGACTGCGCGAGCTGCATTCACAGCACTATATCGAGCSizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
.....................GTTGGCATCGATGACAGCGAG....................................................................................................2112.0020000000000000000000000000000000010000100000
...............................ATGACAGCGAGGTGCTTGCC...........................................................................................2011.0011000000000000000000000000000000000000000000
...............................................TGCCTATCAGATGATCTCGCAGGAGC.....................................................................2611.0010000000000001000000000000000000000000000000
.....................GTTGGCATCGATGACAGC.......................................................................................................1811.0010000000000000000000000000000001000000000000
.....................GTTGGCATCGATGACAGCGA.....................................................................................................2011.0010000000000000000000000000000000000000001000
.......................................................................................ATTGTGCCCGGCTACTTTGGACTGCGC............................2711.0010000000000000000000000000000000000000001000
....................CGTTGGCATCGATGACAGC.......................................................................................................1911.0010000000000000000100000000000000000000000000
.....................GTTGGCATCGATGACAGCGAGGT..................................................................................................2311.0010000000000000000000000000000000010000000000
..........................................................................................GTGCCCGGCTACTTTGGAC.................................1911.0010001000000000000000000000000000000000000000
...................................................TATCAGATGATCTCGCAGGAGCC....................................................................2311.0010100000000000000000000000000000000000000000
....................................................................................................ACTTTGGACTGCGCGAGCT.......................1911.0010001000000000000000000000000000000000000000
droMoj3
GGAATTGTGCGCAAGCGGATCGCTGGCATCGAGGACAGCGAGGTGTTGGCCTATCAGCAGATCTCGCAGGAGCCGAAGACCTCACAGATTGTGCCCGCCTACTTTGGATTGCGGGAACTGCAGGGACAGCACTATATCGAGCSizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
.......................TGGCATCGAGGACAGCGAG....................................................................................................1911.001000010
.......................................................AGCAGATCTCGCAGGAGCC....................................................................1911.001010000
droGri2
GGCATTGTGCGTAAGCGCATTGTTGGCATCGAGGACAGCGAGGTGCTTGCCTATCGTCAGATCTCGCAGGAGCCAAAGACCTCGCAGATTGTGCCCGCCTTTTATGGACTGCGCGAGATGCACTCACAGCATTTTATTGAGTSizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
..............................GAGGACAGCGAGGTGCTTG.............................................................................................1911.00101
......................................................CGTCAGATCTCGCAGGAGCCAAAGAC..............................................................2611.00101
..................................................................CAGGAGCCAAAGACCTCG..........................................................1811.00101
.....................................................................................................TTATGGACTGCGCGAGATGCACTCACA..............2711.00110

Generated: 12/06/2013 at 02:30 PM