ID:

dsi_80

Coordinate:

chr2h_Mrandom_015:118400-118478 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.3 -12.2 -12.0 -7.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamily
Gypsy1-I_DM-intLTRGypsy

Sense Strand Reads

ATTCTATTGTGTGCATTTCGTTACACTTGGTTTTTTATGTGAATTCGCTACACTAGCTCTGCAGCCCTCTCGAGCTTTGTTGTTGTTACCCCACTCCACTTCGCCAACCGACACCGGCGCATGCATTGCTGTGGCAATTTTGTATTTTTTTCTCTTTGTCTTCGCGGTGGCAAATTTTA
******************************************....((.(((..(((((............))))).))).))..................((((..........))))....********************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553488
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553485
Ovary
SRR618934
Ovary
M053
Female-body
M025
embryo
O001
Testis
O002
Head
GSM343915
embryo
.....................................TGTGAATTCGCTACACTAGCTCTGC..................................................................................................................... 25 0 5 56.20 281 57 67 73 73 3 8 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTG.................................................................................................... 22 0 5 32.00 160 39 16 43 29 25 8 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCA.................................................................................................................... 26 0 5 28.60 143 28 36 46 33 0 0 0 0 0 0
..........................TTGGTTTTTTATGTGAATTCGCTACAC.............................................................................................................................. 27 0 1 25.00 25 13 7 2 2 0 1 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCAGC.................................................................................................................. 28 0 5 21.80 109 20 39 20 30 0 0 0 0 0 0
...........................TGGTTTTTTATGTGAATTCGCTACAC.............................................................................................................................. 26 0 1 13.00 13 10 0 0 2 0 1 0 0 0 0
...........................TGGTTTTTTATGTGAATTCGCTACACT............................................................................................................................. 27 0 1 13.00 13 7 2 3 0 0 0 0 0 1 0
..........................TTGGTTTTTTATGTGAATTCGCTACACT............................................................................................................................. 28 0 1 12.00 12 4 2 2 3 0 0 1 0 0 0
................................................................................................................ACCGGCGCATGCATTGCTGTGGCAATT........................................ 27 0 5 8.60 43 15 8 10 8 2 0 0 0 0 0
................................................TACACTAGCTCTGCAGCCCTCTCGAGC........................................................................................................ 27 0 5 8.40 42 2 8 5 22 0 0 4 0 0 1
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGG......... 21 0 3 8.33 25 8 4 9 3 1 0 0 0 0 0
..........................TTGGTTTTTTATGTGAATTCGCTACA............................................................................................................................... 26 0 1 8.00 8 2 3 1 2 0 0 0 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTCGCCA......................................................................... 27 0 5 7.60 38 6 14 6 12 0 0 0 0 0 0
..................................................CACTAGCTCTGCAGCCCTCTCGAGC........................................................................................................ 25 0 5 7.60 38 0 6 4 10 0 0 18 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTCGCC.......................................................................... 26 0 5 6.60 33 10 12 5 6 0 0 0 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTCGC........................................................................... 25 0 5 6.40 32 9 6 9 8 0 0 0 0 0 0
..........................................................................................................................................TTTGTATTTTTTTCTCTTTGTCTTCGC.............. 27 0 3 5.67 17 3 9 4 0 1 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTGTTG................................................................................................. 25 0 5 5.60 28 2 0 1 0 21 4 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCAG................................................................................................................... 27 0 5 5.40 27 2 15 5 5 0 0 0 0 0 0
............................................................................................................................................TGTATTTTTTTCTCTTTGTCTTCGCGG............ 27 0 3 5.33 16 2 6 2 4 1 1 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTGTTGT................................................................................................ 26 0 5 5.00 25 5 0 1 1 13 4 0 0 0 1
..............................................................................................................................................TATTTTTTTCTCTTTGTCTTCGCGG............ 25 0 3 5.00 15 3 5 2 3 1 1 0 0 0 0
.......................................TGAATTCGCTACACTAGCTCTGCAGC.................................................................................................................. 26 0 5 4.40 22 5 2 7 4 1 2 1 0 0 0
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGGCAAA..... 25 0 3 4.33 13 2 2 7 2 0 0 0 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTCGCCAA........................................................................ 28 0 5 4.20 21 3 3 6 9 0 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCTTTGTTGT................................................................................................ 24 0 5 4.00 20 0 0 1 0 17 2 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTCGCGGTGG......... 26 0 3 4.00 12 2 0 10 0 0 0 0 0 0 0
...................................................................................TGTTACCCCACTCCACTTCGCCAAC....................................................................... 25 0 5 4.00 20 0 0 0 1 1 5 13 0 0 0
........................ACTTGGTTTTTTATGTGAATTCGC................................................................................................................................... 24 0 1 4.00 4 0 1 3 0 0 0 0 0 0 0
..............................................................................................................................................TATTTTTTTCTCTTTGTCTTCGCGGT........... 26 0 3 4.00 12 3 0 3 3 2 0 1 0 0 0
................................................TACACTAGCTCTGCAGCCCTCTCGA.......................................................................................................... 25 0 5 3.80 19 4 5 3 7 0 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCTTTGTTG................................................................................................. 23 0 5 3.60 18 0 0 0 0 16 2 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTG...................................................................................................................... 24 0 5 3.40 17 3 6 4 3 0 1 0 0 0 0
...........................................................................................................................................TTGTATTTTTTTCTCTTTGTCTTCGCGG............ 28 0 3 3.33 10 4 4 1 1 0 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCTTTG.................................................................................................... 20 0 5 3.20 16 1 0 3 0 10 2 0 0 0 0
................................................................................................................ACCGGCGCATGCATTGCTGTGGCAAT......................................... 26 0 5 3.00 15 1 1 1 0 11 1 0 0 0 0
...........................TGGTTTTTTATGTGAATTCGCTACACTA............................................................................................................................ 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...........................TGGTTTTTTATGTGAATTCGCTACA............................................................................................................................... 25 0 1 3.00 3 0 1 1 1 0 0 0 0 0 0
.................TCGTTCCACTTGGTTTTTTATGTGAA........................................................................................................................................ 26 1 1 3.00 3 0 0 2 1 0 0 0 0 0 0
..................................................................................................................CGGCGCATGCATTGCTGTGGCAATT........................................ 25 0 5 3.00 15 3 0 3 4 5 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCT....................................................................................................... 19 0 5 3.00 15 2 7 1 3 2 0 0 0 0 0
............................................................................................................................................TGTATTTTTTTCTCTTTGTCTTCGCGGT........... 28 0 3 3.00 9 2 3 2 2 0 0 0 0 0 0
..............................TTTTTTATGTGAATTCGCTACACTAGC.......................................................................................................................... 27 0 1 3.00 3 0 1 0 1 0 1 0 0 0 0
..........................................................................................................................................TTTGTATTTTTTTCTCTTTGTCTTCGCGG............ 29 0 3 2.67 8 0 1 3 3 1 0 0 0 0 0
...........................................................................................................................................TTGTATTTTTTTCTCTTTGTCTTCGC.............. 26 0 3 2.33 7 1 3 2 0 0 1 0 0 0 0
...............................................................................................................CACCGGCGCATGCATTGCTGTGGCAATT........................................ 28 0 4 2.25 9 5 2 0 2 0 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTGT................................................................................................... 23 0 5 2.20 11 0 0 2 0 3 6 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTT...................................................................................................... 20 0 5 2.20 11 2 1 2 1 5 0 0 0 0 0
............................................................................................................................................TGTATTTTTTTCTCTTTGTCTTCGC.............. 25 0 3 2.00 6 3 0 1 2 0 0 0 0 0 0
..........................TTGGTTTTTTATGTGAATTCGCTACACTAGC.......................................................................................................................... 31 0 1 2.00 2 0 1 0 1 0 0 0 0 0 0
.........................CTTGGTTTTTTATGTGAATTCGCTACACT............................................................................................................................. 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCAGCC................................................................................................................. 29 0 5 2.00 10 2 2 4 1 0 1 0 0 0 0
ATTCTATTGTGTGCATTTCGTTACA.......................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...............TTTCGTTACACTTGGTTTTTTATGTGA......................................................................................................................................... 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGGCA....... 23 0 3 2.00 6 3 2 1 0 0 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCT....................................................................................................................... 23 0 5 1.80 9 1 1 3 1 3 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGC........................................................................................................ 18 0 5 1.80 9 0 2 0 4 3 0 0 0 0 0
............................................................GCAGCCCTCTCGAGCTTTG.................................................................................................... 19 0 5 1.80 9 0 0 0 0 9 0 0 0 0 0
.....................................................TAGCTCTGCAGCCCTCTCGAGCTT...................................................................................................... 24 0 5 1.80 9 0 0 0 0 7 2 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTGCTGT............................................... 24 0 4 1.75 7 0 0 0 1 6 0 0 0 0 0
.................................................................................................................................................TTTTTTCTCTTTGTCTTCGCGGTGG......... 25 0 3 1.67 5 0 1 3 1 0 0 0 0 0 0
.........................................................................................................................................TTTTGTATTTTTTTCTCTTTGTCTT................. 25 0 3 1.67 5 4 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTTTTTTCTCTTTGTCTTCGCGGTGG......... 28 0 3 1.67 5 3 1 0 1 0 0 0 0 0 0
....................................................................................................................................................TTTCTCTTTGTCTTCGCGGTGG......... 22 0 3 1.67 5 3 0 0 2 0 0 0 0 0 0
............................................................GCAGCCCTCTCGAGCTTTGTTG................................................................................................. 22 0 5 1.60 8 0 0 0 0 8 0 0 0 0 0
.................................................................................................................CCGGCGCATGCATTGCTGTGGCAATT........................................ 26 0 5 1.60 8 5 1 0 2 0 0 0 0 0 0
...............................................................................................................CACCGGCGCATGCATTGCTGTGGCAA.......................................... 26 0 4 1.50 6 0 1 0 0 5 0 0 0 0 0
..............................................................AGCCCTCTCGAGCTTTGTTGTTGT............................................................................................. 24 0 5 1.40 7 0 0 4 0 3 0 0 0 0 0
..................................................................................................................CGGCGCATGCATTGCTGTGGCAAT......................................... 24 0 5 1.40 7 0 0 1 0 5 1 0 0 0 0
...................................................................................TGTTACCCCACTCCACTTCGCCAACC...................................................................... 26 0 5 1.40 7 0 0 0 0 0 1 1 5 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTT..................................................................................................... 21 0 5 1.40 7 1 0 1 2 3 0 0 0 0 0
...................................................................................TGTTACCCCACTCCACTTCGCCAACCGAC................................................................... 29 0 5 1.40 7 0 0 0 0 0 3 4 0 0 0
...................................................................................TGTTACCCCACTCCACTTCGCCAACCGA.................................................................... 28 0 5 1.40 7 2 0 1 0 0 3 0 0 0 1
.....................................TGTGAATTCGCTACACTAGCTC........................................................................................................................ 22 0 5 1.40 7 1 0 0 0 1 0 0 5 0 0
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGGC........ 22 0 3 1.33 4 0 0 2 1 1 0 0 0 0 0
..................................................................................................................................................TTTTTCTCTTTGTCTTCGCGGTGG......... 24 0 3 1.33 4 1 2 1 0 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGCGGTGG......... 23 0 3 1.33 4 0 2 2 0 0 0 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTCGCGGT........... 24 0 3 1.33 4 0 0 4 0 0 0 0 0 0 0
..............................................................AGCCCTCTCGAGCTTTGTTGTTGTT............................................................................................ 25 0 5 1.20 6 1 2 2 0 1 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCTTTGTTGTTG.............................................................................................. 26 0 5 1.20 6 3 0 2 0 1 0 0 0 0 0
.....................................................TAGCTCTGCAGCCCTCTCGAGA........................................................................................................ 22 1 5 1.20 6 0 1 3 2 0 0 0 0 0 0
........................ACTTGGTTTTTTATGTGAATTCGCTACAC.............................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................TTTCTCTTTGTCTTCGCGGTGGCAAA..... 26 0 3 1.00 3 1 1 1 0 0 0 0 0 0 0
........GTGTGCATTTCGTTAC........................................................................................................................................................... 16 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................TTTTATGTGAATTCGCTACACTAGCTCTG...................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................TTTTTTATGTGAATTCGCTACACTAG........................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............TTTCGTTACACTTGGTTTTTTATGTGAA........................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................TCGTTACACTTGGTTTTTTATGTGAATT...................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................TTGGTTTTTTATGTGAATTCGCTACCC.............................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTTGTATTTTTTTCTCTTTGTCTTC................ 25 0 3 1.00 3 1 0 0 0 0 0 2 0 0 0
.........................CTTGGTTTTTTATGTGAATTCGCTACAC.............................................................................................................................. 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................ACTTGGTTTTTTATGTGAATTCG.................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................TATGTGAATTCGCTACACTAGCTCTGC..................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......................CACTTGGTTTTTTATGTGAATTCGC................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................TACACTTGGTTTTTTATGTGAATTCGC................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........TGCATTTCGTTACACTTGGTTTTTT............................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTTGTCTCTTTGTCTTCGCGGTGG......... 24 1 3 1.00 3 0 0 3 0 0 0 0 0 0 0
...........................TGGTTTTTTATGTGAATTCGCTACACTAGC.......................................................................................................................... 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................TAGCTCTGCAGCCCTCTCGAGCTTTG.................................................................................................... 26 0 5 1.00 5 0 0 0 0 2 3 0 0 0 0
................TTCGTTACACTTGGTTTTTTATGTGA......................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........TGCATTTCGTTCCACTTGGTTTTTTA.............................................................................................................................................. 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................TTGGTTTTTTATGTGA......................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................CACCGGCGCATGCATTGCTGTGGCAAT......................................... 27 0 4 1.00 4 0 0 1 0 2 1 0 0 0 0
..........................TTGGTTTTTTATGTGAATTCGCTA................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................TTTTATGTGAATTCGCTACACTAGCTC........................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............TTTCGTTACACTTGGTTTTTTA.............................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................TTGGTTTTTTATGTGAATTCGCTACACTA............................................................................................................................ 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.TTCATTTGTGCGCATTTCGTTAC........................................................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTCGCCAAC....................................................................... 29 0 5 1.00 5 1 1 0 3 0 0 0 0 0 0
.......................CACTTGGTTTTTTATGTGAATTCGCTA................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................TACACTTGGTTTTTTATGTGAATTCGCTA................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................TGGTTTTTTTATGTGAATTCGCTACAC.............................................................................................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................TTTTATGTGAATTCGCTACACTAGC.......................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................TATGTGAATTCGCTACACTAGCTCTGCA.................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....ATTGTGTGCATTTCGTTA............................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCTTTGTTGTTGT............................................................................................. 27 0 5 1.00 5 1 1 2 0 1 0 0 0 0 0
...........................TGATTTTTTATGTGAATTCGCTACACT............................................................................................................................. 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................TACACTAGCTCTGCAGCCCTCTCGAG......................................................................................................... 26 0 5 1.00 5 1 2 0 2 0 0 0 0 0 0
.........................................................................................................AACCGACACCGGCGCATGCATTGCT................................................. 25 0 4 1.00 4 1 2 0 1 0 0 0 0 0 0
.................................................................................................................................TGTGGCAATTTTGTATTTTTTTCTCTT....................... 27 0 3 1.00 3 2 0 1 0 0 0 0 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTCG............................................................................ 24 0 5 1.00 5 0 0 1 4 0 0 0 0 0 0
..........................TTGGTTTTTTATGTGAATTCTCTACACT............................................................................................................................. 28 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.......................................TGAATTCGCTACACTAGCTCTGCAGCC................................................................................................................. 27 0 5 0.80 4 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................TCTCTTTGTCTTCGCGGTGGCAAA..... 24 0 5 0.80 4 2 1 1 0 0 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAA......................................................................................................... 17 1 5 0.80 4 0 1 0 3 0 0 0 0 0 0
...................................................................TCTCGAGCTTTGTTGTTGTTACCCCAC..................................................................................... 27 0 5 0.80 4 0 1 2 1 0 0 0 0 0 0
................................................TACACTAGCTCTGCAGCCCTCTCGAGCT....................................................................................................... 28 0 5 0.80 4 0 0 0 0 0 1 3 0 0 0
...................................................................................................................GGCGCATGCATTGCTGTGGCAATT........................................ 24 0 5 0.80 4 2 1 0 0 1 0 0 0 0 0
................................................TACACTAGCTCTGCAGCCCTCTCG........................................................................................................... 24 0 5 0.80 4 0 1 0 3 0 0 0 0 0 0
......................................................................................................................................................TCTCTTTGTCTTCGCGGTGG......... 20 0 5 0.80 4 0 0 0 3 1 0 0 0 0 0
.........................................................................................................AACCGACACCGGCGCATGCATTGCTG................................................ 26 0 4 0.75 3 2 0 1 0 0 0 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTGCTGTGGCAATT........................................ 31 0 4 0.75 3 0 1 0 2 0 0 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTC................ 19 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0
..................................................................................................................................................TTTTTCTCTTTGTCTTCGCGGTGGC........ 25 0 3 0.67 2 0 0 0 2 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGCGGTGGC........ 24 0 3 0.67 2 0 0 1 0 0 1 0 0 0 0
...................................................................................................................................TGGCAATTTTGTATTTTTTTCTCTT....................... 25 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0
..............................................................................................................................................TATTTTTTTCTCTTTGTCTTCGCGGTG.......... 27 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TTTTTCTCTTTGTCTTCGCGGTGGCA....... 26 0 3 0.67 2 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................TGTGGCAATTTTGTATTTTTTTCTC......................... 25 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGCGGTGGCAA...... 26 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTCGCGGTG.......... 25 0 3 0.67 2 0 0 1 1 0 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCTTTGTT.................................................................................................. 22 0 5 0.60 3 0 0 0 0 3 0 0 0 0 0
.....................................................TAGCTCTGCAGCCCTCTCGA.......................................................................................................... 20 0 5 0.60 3 0 0 0 2 1 0 0 0 0 0
.....................................................................TCGAGCTTTGTTGTTGTTACCCCACT.................................................................................... 26 0 5 0.60 3 0 2 1 0 0 0 0 0 0 0
...........................................TTCGCTACACTAGCTCTGCAGCCC................................................................................................................ 24 0 5 0.60 3 0 0 1 0 0 0 2 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTGTT.................................................................................................. 24 0 5 0.60 3 0 0 0 0 2 1 0 0 0 0
................................................TACACTAGCTCTGCAGCCCTC.............................................................................................................. 21 0 5 0.60 3 1 1 1 0 0 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCTTTGTTGTT............................................................................................... 25 0 5 0.60 3 0 0 2 0 1 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGCT....................................................................................................... 17 0 5 0.60 3 0 0 0 0 3 0 0 0 0 0
........................................................................................................................................................TCTTTGTCTTCGCGGTGGCA....... 20 0 5 0.60 3 1 1 0 0 1 0 0 0 0 0
....................................ATGTGAATTCGCTACACTAGCTCTGC..................................................................................................................... 26 0 5 0.60 3 1 0 1 0 1 0 0 0 0 0
................................................TACACTAGCTCTGCAGCCCTCT............................................................................................................. 22 0 5 0.60 3 2 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TCTCTTTGTCTTCGCGGTGGC........ 21 0 5 0.60 3 0 0 3 0 0 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGA.......................................................................................................... 16 0 5 0.60 3 0 0 0 0 3 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCAGCCC................................................................................................................ 30 0 5 0.60 3 0 2 0 1 0 0 0 0 0 0
.......................................TGAATTCGCTACACTAGCTCTGCAG................................................................................................................... 25 0 5 0.60 3 1 1 0 1 0 0 0 0 0 0
..............................................................AGCCCTCTCGAGCTTTGTTG................................................................................................. 20 0 5 0.60 3 0 0 0 0 3 0 0 0 0 0
............................................................GCAGCCCTCTCGAGCTTTGTTGT................................................................................................ 23 0 5 0.60 3 0 0 0 0 2 1 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTGCTGTGGCAATA........................................ 31 1 4 0.50 2 0 0 1 1 0 0 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTGCT................................................. 22 0 4 0.50 2 0 1 0 0 1 0 0 0 0 0
........................................................................................................CAACCGACACCGGCGCATGCATTGCTGT............................................... 28 0 4 0.50 2 0 0 0 2 0 0 0 0 0 0
..........................................................................................................ACCGACACCGGCGCATGCATTGCTG................................................ 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................CACCGGCGCATGCATTGCTGTGGC............................................ 24 0 4 0.50 2 0 0 0 0 1 1 0 0 0 0
...............................................................................................................CACCGGCGCATGCATTGCTGTGGCAAA......................................... 27 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0
...............................................................................TTGTTGTTACTTCACTCCACTTCGCC.......................................................................... 26 2 5 0.40 2 0 0 0 2 0 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCT.................................................................................................................... 26 1 5 0.40 2 0 0 2 0 0 0 0 0 0 0
..................................................CACTAGCTCTGCAGCCCTCTCGAGCTT...................................................................................................... 27 0 5 0.40 2 0 0 0 0 1 1 0 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTC............................................................................. 23 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
..............................................................AGCCCTCTCGAGCTTTGTTGT................................................................................................ 21 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
....................................ATGTGAATTCGCTACA............................................................................................................................... 16 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAAA........................................................................................................ 18 2 10 0.40 4 0 1 1 2 0 0 0 0 0 0
.................................................ACACTAGCTCTGCAGCCCTCTCGAGC........................................................................................................ 26 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0
.....................................TCTGAATTCGCTACACTAGCTCTGC..................................................................................................................... 25 1 5 0.40 2 0 1 0 1 0 0 0 0 0 0
...........................................................TGCAGCCCTCTCGAGC........................................................................................................ 16 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCAGCCCT............................................................................................................... 31 0 5 0.40 2 1 1 0 0 0 0 0 0 0 0
...................................................................................TGTTACCCCACTCCACTTCGCCA......................................................................... 23 0 5 0.40 2 0 0 0 0 1 1 0 0 0 0
.......................................TGAATTCGCTACACTAGCTCTGCAGCCC................................................................................................................ 28 0 5 0.40 2 1 1 0 0 0 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCAGCCTT............................................................................................................... 31 1 5 0.40 2 0 0 2 0 0 0 0 0 0 0
...................................................................................TGTTACCCCACTCCACTTCGCC.......................................................................... 22 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
...................................................................................................................GGCGCATGCATTGCTGTGGCAATTTT...................................... 26 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................TCTTTGTCTTCGCGGTG.......... 17 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
...........................................TTCGCTACACTAGCTCTGCAGCCCTCT............................................................................................................. 27 0 5 0.40 2 0 1 0 0 0 1 0 0 0 0
...................................................................................................................GGCGCATGCATTGCTGT............................................... 17 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
...........................................TTCGCTACACTAGCTCTGCAGCCCTCTC............................................................................................................ 28 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0
...............................................CTACACTAGCTCTGCAGCCCTCTCGAGC........................................................................................................ 28 0 5 0.40 2 0 0 0 1 0 0 1 0 0 0
.........................................................TCTGTAGCCCTCTCGAGCTTTG.................................................................................................... 22 1 5 0.40 2 0 0 0 0 2 0 0 0 0 0
.................................................................................................................CCGGCGCATGCATTGCTGTGGCAATTT....................................... 27 0 5 0.40 2 0 0 0 0 1 1 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGA........................................................................................................ 18 1 5 0.40 2 0 0 0 2 0 0 0 0 0 0
............................................................GCAGCCCTCTCGAGCTT...................................................................................................... 17 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
...............................................................................TTGTTGTTACCCCACTCCACTTCGA........................................................................... 25 1 5 0.40 2 0 2 0 0 0 0 0 0 0 0
........................................................................................................................................................TCTTTGTCTTCGCGGTGG......... 18 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTGTTGTA............................................................................................... 27 1 5 0.40 2 1 0 0 0 1 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTGTTGTT............................................................................................... 27 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0
...............................................................GCCCTCTCGAGCTTTGTTGT................................................................................................ 20 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
......................................................................CGAGCTTTGTTGTTGTTACCCCACT.................................................................................... 25 0 5 0.40 2 0 0 2 0 0 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGCAGCA................................................................................................................. 29 1 5 0.40 2 1 0 0 1 0 0 0 0 0 0
.................................................................................................................CCGGCGCATGCATTGCTGTGGCAAT......................................... 25 0 5 0.40 2 0 0 0 0 2 0 0 0 0 0
........................................................................................................................................................TCTTTGTCTTCGCGGTGGC........ 19 0 5 0.40 2 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGCGGTGGCTT...... 26 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................GTATTTTTTTCTCTTTGTCTTCGCGG............ 26 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGGCAAT..... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................TGGCAATTTTGTATTTTTTTCTCTTT...................... 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGGCAA...... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTTTTTTCTCTTTGTCTTC................ 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................TTTCTCTTTGTCTTCGCGGTG.......... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................TGTGGCAATTTTGTATTTTTTTCTCT........................ 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TGTTTTTTTCTCTTTGTCTTCGCGGT........... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................GTATTTTTTTCTCTTTGTCTTCGCGGT........... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................AATTTTGTATTTTTTTCTCTTTGTCTT................. 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................TTTTGTATTTTTTTCTCTTTGTC................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TTTTTTGTCTCTTTGTCTTCGCGGT........... 25 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGCGGTGGCAAA..... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTTGTATTTTTTTCTCTGTGTCTTCG............... 26 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTTTTTTCTCTTTGTCTTCGCGGT........... 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGGCAAAT.... 26 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTCGCGG............ 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTCTCTTTGTCTTCGCGGTGGCAAAA.... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................TTTCTCTTTGTCTTCGC.............. 17 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................TGCTGTGGCAATTTTGTATTTTGAC............................ 25 3 6 0.33 2 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................TTTTTCTCTTTGTCTTCGCGGTG.......... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGC.............. 18 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................TTTGTATTTTTTTCTGTTTGTCTTCGCGG............ 29 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................TGGCAATTTTGTATTTTTTTCTCTTTG..................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................TTTTTCTCTTTGTCTTCGC.............. 19 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTCGCGGTGGC........ 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................TTTTTTCTCTTTGTCTTCGCGGT........... 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................AATTTTGTATTTTTTTCTCTTTGTC................... 25 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGCGGTGGCA....... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTTTTTTCTCTTTGTCTTCGCGGTGG......... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TATTTTTTTCTCTTTGTCTTGGCGG............ 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGAA....................................................................................................... 19 2 6 0.33 2 0 1 1 0 0 0 0 0 0 0
................................................................................................................................................TTTTTGTCTCTTTGTCTTCGCGGT........... 24 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TTTTTCTCTTTGTCTTCGCGG............ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTATTTTTTTCTCTTTGTCTTCGCGG............ 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................TATTTTTTTTCTCTTTGTCTTCGCGGT........... 27 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTCGC.............. 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................TTTTGTCTCTTTGTCTTCGCGGTGGC........ 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................TTTGTATTTTTTTCTCTTTGTCTTCG............... 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................TTTTGTATTTTTTTCTCTTTGTCTTC................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGCTGTGGCAATTTTGTATTTTTTTA........................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TTTTCTCTTTGTCTTCGCGGTGGCAAAT.... 28 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................GTATTTTTTTCTCTTTGTCTT................. 21 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................TGTGGCAATTTTGTATTTTTTTCT.......................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TATTTTTTTCTCTTTGTCTTCG............... 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGTATTTTTTTCTCTTTGTCTTCGCG............. 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................TTTTTTTCTCTTTGTCTTCGCG............. 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................TTTGTATTTTTCTCTCTTTGTCTTCGCG............. 28 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................GACACCGGCGCATGCATTGCTGTGGC............................................ 26 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................CGACACCAGCGCATGCATTGCTGTGG............................................. 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................ACCGACACCGGCGCATGCATTGCTGT............................................... 26 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................CGCATGCATTGCTGTGGCAATTTTGTA................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
....TATTGTGTGCATTTCGTT............................................................................................................................................................. 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TTTTTTCTCTTTGTCTT................. 17 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
TCTCTATTGTGTGCATTTCGT.............................................................................................................................................................. 21 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................TGCATTGCTGTGGCAATTTTGTA................................... 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................GGCGCATGCATTGCTGTGGCAATTTTGTA................................... 29 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...CTATTGTGTGCATTTCGT.............................................................................................................................................................. 18 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................CCGACACCGGCGCATGCATT.................................................... 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTGCTGTGGC............................................ 27 0 4 0.25 1 0 0 0 0 0 1 0 0 0 0
..........................................................................................................ACCGACACCGGCGCATGCATTGCTGTGG............................................. 28 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................GACACCGGCGCATGCATTGCTGT............................................... 23 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTGCTGTGG............................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................CACCTGCGCATGCATTGCTGTGGCAAT......................................... 27 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................TGTAATTTGTTCTCTTTGTCTGC................ 23 3 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................GACACCGGCGCATGCATTGCTGTGGCAATT........................................ 30 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................AACCGACACCGGCGCATGCATTGCTGA............................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................CGGCGCATGCATTGCTGTGGCAATTTTG..................................... 28 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................AACCGACACCGGCGCATGCATTGCTGT............................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................TGACACCGGCGCATGCATTGCTGT............................................... 24 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTGCTGTA.............................................. 25 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................TGTCTGTGGCAATTTTGTATTTTTT............................. 25 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................CGACACCGGCGCATGCATTG................................................... 20 0 4 0.25 1 0 0 0 0 0 0 0 0 0 1
.........................................................................................................AACCGACACCGGCGCATGCATTGCTGTA.............................................. 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................CATGCATTGCTGTGGCAATTTTGTA................................... 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0
..........................................ATTCGCTACACTAGCTCTGCAGCCC................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
................................................TACACTAGCTCTGCAGCCCTCTCGAA......................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..................................................CACTAGCTCTGCAGCCCTCTCGAG......................................................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
................................................................................TGTTGTTACCCCACTCCACTTCGCCAAC....................................................................... 28 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGAA.................................................................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................TGCTGTGGCAATTTTGTATT................................. 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
......................................................................................TACCCCACTCCACTTCGCCAACCGACACC................................................................ 29 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................TTGAATTCGCTACACTAGCTCTGC..................................................................................................................... 24 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
..........................................ATTCGCTACACTAGCTCTGC..................................................................................................................... 20 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.....................................TGTGAATTCGCTACAC.............................................................................................................................. 16 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCCTTGTTG................................................................................................. 25 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTGTTGTTG.............................................................................................. 28 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTTGTCTTCGCGGTGGCAAA..... 20 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
..................................................................CTCTCGAGCTTTGTTGT................................................................................................ 17 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...............................................................................TTCTTGTTACCCCACTCCACTTCGCCAAC....................................................................... 29 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.........................................................TCTGCAGCCCTCTCGAGCTTTT.................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...............................................................................TTGTTGTTACCCCATTCCACTTCGCC.......................................................................... 26 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.....................................TGTTAATTCGCTACACTAGCTCTG...................................................................................................................... 24 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0
...........................................CTCGCTACACTAGCTCTGCAGCCCTCTC............................................................................................................ 28 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................TCTCTTTGTCTTCGCGGTGGCA....... 22 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0
..............................................................................................TCCACTTCGCCAACCGACACCGGCG............................................................ 25 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.....................................TGTGAATTCGCTACACTAGCTCTGT..................................................................................................................... 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................................................CCCCACTCCACTTCGCCAACCGACACC................................................................ 27 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0
.....................................................TAGCTCTGCAGCCCTCTCGAGCTTTGTTG................................................................................................. 29 0 5 0.20 1 0 0 0 0 0 1 0 0 0 0
.............................................CGCTACACTAGCTCTGCAGCCCTCTCGAGC........................................................................................................ 30 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0
................................................TACACTAGCTCTGCAGCTCTCTCGAGC........................................................................................................ 27 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.....................................GGTGAATTCGCTACACTAGCTCTGCA.................................................................................................................... 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAAAATTTGCCACCGCGAAGACAAAGAGAAAAAAATACAAAATTGCCACAGCAATGCATGCGCCGGTGTCGGTTGGCGAAGTGGAGTGGGGTAACAACAACAAAGCTCGAGAGGGCTGCAGAGCTAGTGTAGCGAATTCACATAAAAAACCAAGTGTAACGAAATGCACACAATAGAAT
********************************************************....((((..........))))..................((.(((.(((((............)))))..))).))....******************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary
SRR553485
Ovary
SRR618934
Ovary
SRR553487
Ovary
SRR553488
Ovary
M053
Female-body
O001
Testis
M025
embryo
GSM343915
embryo
..........................................................................................GTAACAACAACAAAGCTCGAGAGG................................................................. 24 0 5 452.40 2262 1122 792 0 232 116 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGG................................................................ 25 0 5 67.40 337 159 153 1 15 9 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAATTCACA..................................... 26 0 5 43.20 216 7 4 173 10 12 9 0 0 1
..........................................................................................GTAACAACAACAAAGCTCGAGAG.................................................................. 23 0 5 32.80 164 60 43 0 39 22 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCA........... 26 1 1 32.00 32 0 18 0 13 1 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGC............ 25 1 1 28.00 28 0 13 0 15 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGGC............................................................... 26 0 5 18.60 93 53 31 0 9 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCGAGA................................................................... 26 0 5 13.20 66 9 7 34 0 2 13 0 1 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATG............. 24 1 1 13.00 13 0 12 0 1 0 0 0 0 0
....................................................................................................................................CGAATTCACATAAAAAACCAAGTGGA..................... 26 1 1 13.00 13 0 8 0 5 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCGAGAG.................................................................. 27 0 5 6.40 32 1 4 23 0 0 4 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCGAG.................................................................... 25 0 5 5.80 29 0 0 14 0 0 5 10 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCGA..................................................................... 24 0 5 5.80 29 2 0 16 0 0 6 5 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGA................................................................... 22 0 5 5.20 26 10 7 0 2 7 0 0 0 0
................................................................................................................GGGCTGCAGAGCTAGTGTAGCGAATT......................................... 26 0 5 3.80 19 0 0 19 0 0 0 0 0 0
TAAAATTTGCCACCGCGAAGACAAAGAGA...................................................................................................................................................... 29 0 5 3.40 17 6 11 0 0 0 0 0 0 0
................................................................................................................GGGCTGCAGAGCTAGTGTAGCGAAT.......................................... 25 0 5 3.40 17 0 0 17 0 0 0 0 0 0
.......................................................................................................................AGAGCTAGTGTAGCGAATTCACA..................................... 23 0 5 3.20 16 0 0 16 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGGA............................................................... 26 1 5 3.20 16 5 7 0 2 2 0 0 0 0
.......................................................................................................................AGAGCTAGTGTAGCGAATTCACATA................................... 25 0 1 3.00 3 0 0 3 0 0 0 0 0 0
.............................................................................................................................AGTGTAGCGAATTCACA..................................... 17 0 5 3.00 15 0 0 15 0 0 0 0 0 0
....................................................................................................................................CGAATTCACATAAAAAACCAAGTGG...................... 25 1 1 3.00 3 0 2 0 1 0 0 0 0 0
......................................................TGCATGCGCCGGTGTCGGTTGGCGAAG.................................................................................................. 27 0 4 3.00 12 3 1 7 1 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGTAACGAA................ 21 0 1 3.00 3 1 0 1 0 1 0 0 0 0
..........................................................................................GGAACAACAACAAAGCTCGAGAGG................................................................. 24 1 5 2.60 13 9 4 0 0 0 0 0 0 0
................................................................................................................GGGCTGCAGAGCTAGTGTAGCGAA........................................... 24 0 5 2.40 12 0 0 12 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGC.............................................. 17 0 5 2.40 12 0 0 12 0 0 0 0 0 0
............................................GCCACAGCAATGCATGCGCCGGTGTCGGT.......................................................................................................... 29 0 4 2.25 9 3 5 0 0 1 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAATT......................................... 22 0 5 2.00 10 0 0 10 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCACA......... 28 1 1 2.00 2 0 2 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCAC.......... 27 1 1 2.00 2 0 1 0 1 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCACAC........ 29 1 1 2.00 2 0 1 0 1 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCG...................................................................... 23 0 5 1.80 9 0 0 7 0 0 2 0 0 0
................................................................................................................GGGCTGCAGAGCTAGTGTAGCGAAA.......................................... 25 1 5 1.80 9 0 0 9 0 0 0 0 0 0
..........................................TTGCCACAGCAATGCATGCGCCGGT................................................................................................................ 25 0 5 1.80 9 2 3 3 0 0 1 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGT................................................................. 24 1 5 1.80 9 1 4 0 3 1 0 0 0 0
......................................................TGCATGCGCCGGTGTCGGTTGGCGA.................................................................................................... 25 0 4 1.75 7 0 2 0 1 4 0 0 0 0
..................AGACAAAGAGAAAAAAATACAAAATT....................................................................................................................................... 26 0 3 1.67 5 0 1 1 2 1 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAATTCA....................................... 24 0 5 1.60 8 0 0 8 0 0 0 0 0 0
..........................................................TGCGCCGGTGTCGGTTGGCGAAGTG................................................................................................ 25 0 5 1.60 8 0 0 8 0 0 0 0 0 0
..............................................................................................................GAGGGCTGCAGAGCTAGTGTAGCGAA........................................... 26 0 5 1.60 8 0 0 8 0 0 0 0 0 0
..............................................CACAGCAATGCATGCGCCGGTGTCGGT.......................................................................................................... 27 0 4 1.50 6 2 2 1 1 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTA................................................ 15 0 5 1.40 7 0 0 7 0 0 0 0 0 0
......................................................................GGTTGGCGAAGTGGAG............................................................................................. 16 0 5 1.40 7 0 0 7 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAA........................................................................... 18 0 5 1.40 7 0 0 2 0 0 0 5 0 0
.................................................AGCAATGCATGCGCCGGTGTCGGTTGG....................................................................................................... 27 0 4 1.25 5 2 2 1 0 0 0 0 0 0
......................................................TGCATGCGCCGGTGTCGGTTGGCGAA................................................................................................... 26 0 4 1.25 5 1 3 0 1 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAATTCAC...................................... 25 0 5 1.20 6 0 0 5 0 0 1 0 0 0
.........................................ATTGCCACAGCAATGCATGCGCCGGT................................................................................................................ 26 0 5 1.20 6 1 3 1 1 0 0 0 0 0
....................................................................................................................................CGAATTCACATAAAAAACCAAGTGT...................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................TAGCGAATTCACATAAAAAACCAAGTGGA..................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................CAAAAAACCAAGTGGAACGAAATGC............ 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAA............... 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCG............................................. 18 0 5 1.00 5 0 0 5 0 0 0 0 0 0
..........................................................................................................................................CACATAAAAAACCAAGTGGAACGAAATG............. 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCAAT......... 28 3 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCTA.......... 27 3 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................ACCAAGTGTAACGAAATGC............ 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCATT......... 28 3 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGATAGG................................................................. 24 1 5 1.00 5 4 1 0 0 0 0 0 0 0
.................................................................................TGGAGTGGGGTAACAACAACAAAGC......................................................................... 25 0 5 1.00 5 2 3 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAAACAAGTGGAACGAAATGCA........... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAAT.......................................... 21 0 5 1.00 5 0 0 5 0 0 0 0 0 0
...............................................................................................................AGGGCTGCAGAGCTAGTGTAGCGAA........................................... 25 0 5 1.00 5 0 0 5 0 0 0 0 0 0
...............................................................................................................................TGTAGCGAATTCACATAAAAAACCAAGTG....................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAATGCACATT....... 30 3 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................ACATAAAAAACCAAGTCGAACGAA................ 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCGAGAGG................................................................. 28 0 5 1.00 5 2 2 1 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGTAACGAAATGCACA......... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGTAACGAAATG............. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..................AGACAAAGAGAAAAAAATACAAAAT........................................................................................................................................ 25 0 3 1.00 3 0 0 3 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGTAACGAAATGCAC.......... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGT...................... 15 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................AGAGCTAGTGTAGCGAATTCACATAA.................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................TGTAGCGAATTCACATAAAAAACCAAG......................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................ATTGCCACAGCAATGCATGCGCCGGTG............................................................................................................... 27 0 4 1.00 4 3 1 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAAT.............. 23 1 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGT................................................................ 25 1 5 1.00 5 1 3 0 1 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGTAACGAAATGCA........... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGTAACGAAAA.............. 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAG.................................................................... 21 0 5 0.80 4 2 2 0 0 0 0 0 0 0
............................................................................................................................TAGTGTAGCGAATTCACA..................................... 18 0 5 0.80 4 0 0 4 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGC......................................................................... 20 0 5 0.80 4 0 0 4 0 0 0 0 0 0
...........................................TGCCACAGCAATGCATGCGCCGGT................................................................................................................ 24 0 5 0.80 4 0 2 0 0 1 1 0 0 0
.....................................................................................................AAAGCTCGAGAGGGCTGCAGAGCTAG.................................................... 26 0 5 0.80 4 0 1 3 0 0 0 0 0 0
..........................................................................................................................GCTAGTGTAGCGAATTCACA..................................... 20 0 5 0.80 4 0 0 4 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAATCTCGAGAGG................................................................. 24 1 5 0.80 4 2 2 0 0 0 0 0 0 0
...............................................................................................................AGGGCTGCAGAGCTAGTGTAGCGAATT......................................... 27 0 5 0.80 4 0 0 4 0 0 0 0 0 0
....................................................AATGCATGCGCCGGTGTCGGTTGGCGA.................................................................................................... 27 0 4 0.75 3 3 0 0 0 0 0 0 0 0
.................................................AGCAATGCATGCGCCGGTGTCGGTT......................................................................................................... 25 0 4 0.75 3 1 1 0 1 0 0 0 0 0
.................................................AGCAATGCATGCGCCGGTGTCGGT.......................................................................................................... 24 0 4 0.75 3 0 1 2 0 0 0 0 0 0
.......TGCCACCGCGAAGACAAAGAGAAAAAA................................................................................................................................................. 27 0 3 0.67 2 0 2 0 0 0 0 0 0 0
................GAAGACAAAGAGAAAAAAATACAAAATT....................................................................................................................................... 28 0 3 0.67 2 0 1 0 0 1 0 0 0 0
.......TGCCACCGCGAAGACAAAGAGACAAAAA................................................................................................................................................ 28 1 3 0.67 2 0 0 0 2 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAA........................................... 20 0 5 0.60 3 0 0 3 0 0 0 0 0 0
TAAAATTTGCCACCGCGAAGACAAAGA........................................................................................................................................................ 27 0 5 0.60 3 0 2 0 0 1 0 0 0 0
..............................................................................................................................GTGTAGCGAATTCACA..................................... 16 0 5 0.60 3 0 0 3 0 0 0 0 0 0
..........................................................TGCGCCGGTGTCGGTTGGCGAAGTGG............................................................................................... 26 0 5 0.60 3 0 1 2 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGA................................................................ 25 1 5 0.60 3 1 2 0 0 0 0 0 0 0
..........................................................................................TGAACAACAACAAAGCTCGAGAGG................................................................. 24 2 5 0.60 3 1 2 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGGT............................................................... 26 1 5 0.60 3 2 1 0 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTC....................................................................... 22 0 5 0.60 3 0 0 3 0 0 0 0 0 0
..........................................................TGCGCCGGTGTCGGTTGGCG..................................................................................................... 20 0 5 0.60 3 0 0 3 0 0 0 0 0 0
..........................................................................................GGAACAACAACAAAGCTCGAGAGGG................................................................ 25 1 5 0.60 3 1 2 0 0 0 0 0 0 0
.........................................ATTGCCACAGCAATGCATGCGCCGG................................................................................................................. 25 0 5 0.60 3 0 1 2 0 0 0 0 0 0
...............................................ACAGCAATGCATGCGCCGGTGTCGG........................................................................................................... 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0
............................................GCCACAGCAATGCATGCGCCGGTGTCGG........................................................................................................... 28 0 4 0.50 2 0 2 0 0 0 0 0 0 0
...............................................ACAGCAATGCATGCGCCGGTGTC............................................................................................................. 23 0 4 0.50 2 0 0 2 0 0 0 0 0 0
......................................................TGCATGCGCCGGTGTCGGTT......................................................................................................... 20 0 4 0.50 2 0 0 2 0 0 0 0 0 0
....................................................AATGCATGCGCCGGTGTCGGTTGGC...................................................................................................... 25 0 4 0.50 2 0 1 0 1 0 0 0 0 0
...........................................TGCCACAGCAATGCATGCGCCGGTG............................................................................................................... 25 0 4 0.50 2 0 0 1 0 0 1 0 0 0
....................................................AATGCATGCGCCGGTGTCGGTT......................................................................................................... 22 0 4 0.50 2 0 2 0 0 0 0 0 0 0
...................................................CAATGCATGCGCCGGTGTCGGTT......................................................................................................... 23 0 4 0.50 2 0 2 0 0 0 0 0 0 0
..............................................................................................................................................TAAAAAACCAAGTGGAACGAAAAA............. 24 3 2 0.50 1 0 0 0 1 0 0 0 0 0
..............................................CACAGCAATGCATGCGCCGGTGTCGGTT......................................................................................................... 28 0 4 0.50 2 2 0 0 0 0 0 0 0 0
...................................TACAAAATTGCCACAGCAATGCATG....................................................................................................................... 25 0 4 0.50 2 0 0 0 0 0 2 0 0 0
......................................................TGCATGCGCCGGTGTCGGTTGG....................................................................................................... 22 0 4 0.50 2 0 0 1 1 0 0 0 0 0
.....................................................................................................................GCAGAGCTAGTGTAGCGAA........................................... 19 0 5 0.40 2 0 0 2 0 0 0 0 0 0
...............................................ACAGCAATGCATGCGCCGG................................................................................................................. 19 0 5 0.40 2 0 0 1 1 0 0 0 0 0
..........................................................................................GTAATAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.40 2 1 1 0 0 0 0 0 0 0
....................................................................................AGTGGGGTAACAACAACAAAGCTCGAGA................................................................... 28 0 5 0.40 2 0 2 0 0 0 0 0 0 0
............................................GCCACAGCAATGCATGCGCCGGT................................................................................................................ 23 0 5 0.40 2 0 1 1 0 0 0 0 0 0
.......................................................................................GGGGTAACAACAACAAAGCTCGAGA................................................................... 25 0 5 0.40 2 0 0 0 0 0 2 0 0 0
..........................................................TGCGCCGGTGTCGGTTGGCGAA................................................................................................... 22 0 5 0.40 2 0 0 2 0 0 0 0 0 0
......................................AAAATTGCCACAGCAATGCATGCGCC................................................................................................................... 26 0 5 0.40 2 0 0 2 0 0 0 0 0 0
..........................................................................................CTAACAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.40 2 1 1 0 0 0 0 0 0 0
.................................................................................................................GCCTGCAGAGCTAGTGTAGCGAA........................................... 23 1 5 0.40 2 0 0 2 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGAT................................................................ 25 2 5 0.40 2 0 1 0 1 0 0 0 0 0
............................................................................................AACAACAACAAAGCTCGAGAG.................................................................. 21 0 5 0.40 2 0 0 2 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCTAGAGG................................................................. 24 1 5 0.40 2 1 0 0 0 1 0 0 0 0
..................................................GCAATGCATGCGCCGG................................................................................................................. 16 0 5 0.40 2 1 1 0 0 0 0 0 0 0
.............................................................................................ACAACAACAAAGCTCGA..................................................................... 17 0 5 0.40 2 0 0 2 0 0 0 0 0 0
...............................................................................................AACAACAAAGCTCGAGAG.................................................................. 18 0 5 0.40 2 0 1 1 0 0 0 0 0 0
...............................................................CGGTGTCGGTTGGCGAAGTGGAG............................................................................................. 23 0 5 0.40 2 2 0 0 0 0 0 0 0 0
...............................................................................................................AGGGCTGCAGAGCTAGTGTAGCGAAT.......................................... 26 0 5 0.40 2 0 0 2 0 0 0 0 0 0
..........................................................................................ATAACAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.40 2 0 2 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGA................................................................. 24 1 5 0.40 2 0 2 0 0 0 0 0 0 0
..................................................................................................................GGTGCAGAGCTAGTGTAGCGAATTCACA..................................... 28 1 5 0.40 2 0 0 2 0 0 0 0 0 0
................GAAGACAAAGAGAAAAAAATACAAAAT........................................................................................................................................ 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0
.................AAGACAAAGAGAAAAAAATACAAAAT........................................................................................................................................ 26 0 3 0.33 1 0 0 1 0 0 0 0 0 0
...................GACAAAGAGAAAAAAATACAAAATTGC..................................................................................................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0
.......TGCCACCGCGAAGACAAAGAGAAA.................................................................................................................................................... 24 0 3 0.33 1 0 0 0 1 0 0 0 0 0
.......TGCCACCGCGAAGACAAAGAGAA..................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....TTTGCCACCGCGAAGACAAAGAGAAAAAAA................................................................................................................................................ 30 0 3 0.33 1 0 1 0 0 0 0 0 0 0
....................ACAAAGAGAAAAAAATACAAAATT....................................................................................................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0
.......TGCCACCGCGAAGACAAAGAGAAAAAAA................................................................................................................................................ 28 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................CAAAGAGAAAAAAATACAAAATTGC..................................................................................................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0
..................AGACAAAGAGAAAAAAATACA............................................................................................................................................ 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0
..................AGACAAAGAGAAAAAAA................................................................................................................................................ 17 0 3 0.33 1 0 0 1 0 0 0 0 0 0
........................................AATTGCCACAGCAATGCATGCGC.................................................................................................................... 23 0 7 0.29 2 0 0 2 0 0 0 0 0 0
.......................................AAATTGCCACAGCAATGCATGCGC.................................................................................................................... 24 0 7 0.29 2 0 0 2 0 0 0 0 0 0
.........................................ATTGCCACAGCAATGCATGCGC.................................................................................................................... 22 0 7 0.29 2 0 0 2 0 0 0 0 0 0
...........................................TGCCACAGCAATGCATGCGCCGGTGTC............................................................................................................. 27 0 4 0.25 1 0 0 0 0 0 1 0 0 0
.....................................................ATGCATGCGCCGGTGTCGGTT......................................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0
.....................................................ATGCATGCGCCGGTGT.............................................................................................................. 16 0 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................TGCATGCGCCGGTGTCGGTTCGCGAA................................................................................................... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0
.....................................................ATGCATGCGCCGGTGTCGGTTGGCG..................................................................................................... 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0
.......................................................GCATGCGCCGGTGTCGGTTGGCGA.................................................................................................... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0
..............................................CACAGCAATGCATGCGCCGGTGTC............................................................................................................. 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0
....................................................AATGCATGCGCCGGTGTC............................................................................................................. 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0
....................................................AATGCATGCGCCGGTGTCGGTTG........................................................................................................ 23 0 4 0.25 1 0 0 1 0 0 0 0 0 0
...................................TACAAAATTGCCACAGCAATACATGCGC.................................................................................................................... 28 1 4 0.25 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................GAAATGCACACAATAGAA. 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...............................................ACAGCAATGCATGCGCCGGTGTCGGT.......................................................................................................... 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0
....................................ACAAAATTGCCACAGCAATGCATGCGCC................................................................................................................... 28 0 4 0.25 1 0 0 0 0 0 1 0 0 0
....................................................AATGCATGCGCCGGTGTCGGTTGA....................................................................................................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0
....................................................AATGCATGCGCCGGTTTCGGTT......................................................................................................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0 0
..................AGACAAAGAGAAAAAA................................................................................................................................................. 16 0 4 0.25 1 0 0 1 0 0 0 0 0 0
.....................................................ATGCATGCGCCGGTGTCGGTTGGCGA.................................................................................................... 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0
....................................................AATGCATGCGCCGGTGTCGGT.......................................................................................................... 21 0 4 0.25 1 0 0 0 1 0 0 0 0 0
..........................................TTGCCACAGCAATGCATGCGCCGGTGT.............................................................................................................. 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0
...................................................CAATGCATGCGCCGGTGTCGGTTGG....................................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0
............................................GCCACAGCAATGCATGCGCCGGTGTC............................................................................................................. 26 0 4 0.25 1 0 0 1 0 0 0 0 0 0
............................................GCCACAGCAATGCATGCGCCGGTGT.............................................................................................................. 25 0 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................TGCATGTGCCGGTGTCGGTTGGCGAA................................................................................................... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0
..............................................CACAGCAATGCATGCGCCGGTGTCGGTTGG....................................................................................................... 30 0 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................TGCATGCGCCGGTGTCGGT.......................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0
...............................................ACAGCAATGCATGCGCCGGTGTCGGTT......................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.................................................AGCAATGCATGCGCCGGTGTCGGTTGGCGA.................................................................................................... 30 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..............................................CACAGCAATGCATGCGCCGGTGTCGGTA......................................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................TGCATGCGCCGGTGTCGGTTGACGAA................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0 0 0
....................................................AATGCATGCGCGGGTGTCGGTTGGCGA.................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0
..............................................CACAGCAATGCGTGCGCCGGTGTC............................................................................................................. 24 1 4 0.25 1 0 0 1 0 0 0 0 0 0
................................................................................CGAGAGTGGGGTAACAACAACAAAGCT........................................................................ 27 3 5 0.20 1 0 0 1 0 0 0 0 0 0
........................................................CATGCGCCGGTGTCGGTTG........................................................................................................ 19 0 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAATTC........................................ 23 0 5 0.20 1 0 1 0 0 0 0 0 0 0
.....................................................................................GTGGGGTAACAACAACAAAGCTCGAGA................................................................... 27 0 5 0.20 1 0 0 0 0 1 0 0 0 0
..........................................................................................TTAACAACAACAAAGCTCGAGAGGGA............................................................... 26 2 5 0.20 1 0 1 0 0 0 0 0 0 0
............................................................................................AACAACAACAAAGCTCGAGAGGGCTGC............................................................ 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TTGGGTAACAACAACAAAGCTCGAGA................................................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..................................................................TGTCGGTTGGCGAAGTGGAGT............................................................................................ 21 0 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGGTCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
..................................................................TGTCGGTTGGCGAAGTGGAGTGGG......................................................................................... 24 0 5 0.20 1 0 1 0 0 0 0 0 0 0
...............................................................CGGTGTCGGTTGGCGAAGTGG............................................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................AGAGCTAGTGTAGCGAATTCACAA.................................... 24 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..AAATTTGCCACCGCGA................................................................................................................................................................. 16 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGGCT.............................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0
.................................................................GTGTCGGTTGGCGAAGTGGAG............................................................................................. 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................TTGCCACAGCAATGCATGCGCCG.................................................................................................................. 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................................TCGAGAGGGCTGCAGAGCTAGTGTAG............................................... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGATG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................AGAGCTAGTGTAGCGAACTCACA..................................... 23 1 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TGGGGTAGCAACAACAAAGCTCGAGAG.................................................................. 27 1 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTGGCGAATTCACA..................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTTGAGA................................................................... 22 1 5 0.20 1 0 1 0 0 0 0 0 0 0
.....................................................................................................AAAGCTCGAGAGGGCTGCAGAGCTAGA................................................... 27 1 5 0.20 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAATTCACAGC................................... 28 2 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGTA............................................................... 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0
..................................................................................................AACAAAGCTCGAGAGGGCTGCAGAGC....................................................... 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0
................................................................................................................GGGCTGCAGAGCTAGTGTAGCGAAAA......................................... 26 2 5 0.20 1 0 0 1 0 0 0 0 0 0
...........................................TGCCACAGCAATGCATGCGCCG.................................................................................................................. 22 0 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCGAGAA.................................................................. 27 1 5 0.20 1 0 0 1 0 0 0 0 0 0
.............................................................................................ACAACAACAAAGCTCGAGAGGGCT.............................................................. 24 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................GCAGAGCTAGTGTAGCGAATTC........................................ 22 0 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAATTCACT..................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGTT............................................................... 26 2 5 0.20 1 1 0 0 0 0 0 0 0 0
...........................................................................................TAACAACAACAAAGCTCGAGAGGGC............................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................TCGTTGCCACAGCAATGCATGCGCCGGT................................................................................................................ 28 3 5 0.20 1 0 0 0 0 1 0 0 0 0
........................................................CATGCGCCGGTGTCGGTTGGCGAAGTG................................................................................................ 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAG............................................... 16 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.....................................................................................................AAAGCTCGAGAGGGCTGCAGAGCTA..................................................... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACA............................................................................. 16 0 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCGTG...................................................................... 23 2 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAGCAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
...........................................................................................TAACAACAACAAAGCTCGAGAGG................................................................. 23 0 5 0.20 1 0 0 0 1 0 0 0 0 0
...............................................................................................AACAACAAAGCTCGAGAGG................................................................. 19 0 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTTGAGAG.................................................................. 23 1 5 0.20 1 0 1 0 0 0 0 0 0 0
.........................................................................................GGTAACAACAACAAAGCTCGAGAG.................................................................. 24 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.....................................................................................GTGGGGTAACAACAACAAAGC......................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACGAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
......................................................................................TGGGGTAACAACATCAAAGCTCGA..................................................................... 24 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCCCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
....................................................................TCGGTTGGCGAAGTGGA.............................................................................................. 17 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAAGAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTCTAGCGAATTCACA..................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..............................................................................................................GAGGGCTGCAGAGCTAGTGTAGC.............................................. 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACGACAAAGCTCGAGAGGG................................................................ 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACGACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGTTCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAAA.......................................... 21 1 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCAGGGCTAGTGTAGC.............................................. 17 1 5 0.20 1 0 0 1 0 0 0 0 0 0
............................................GCCACAGCAATGCATGCGCCG.................................................................................................................. 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGGGA................................................................... 22 1 5 0.20 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................TGTAGCGAATTCACA..................................... 15 0 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAA............................................... 16 1 5 0.20 1 0 0 0 1 0 0 0 0 0
.............................................................GCCGGTGTCGGTTGGCGAAGTGG............................................................................................... 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..............................................................................................................GAGGGCTGCAGAGCTAGTGTAGCGT............................................ 25 1 5 0.20 1 0 0 1 0 0 0 0 0 0
...........................................................................................TAACAACAACAAAGCTCGAGAG.................................................................. 22 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................AAATTGCCACAGCAATGCATGCGCC................................................................................................................... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCTCGAT.................................................................... 25 1 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TGAGGTAACAACAACAAAGCTCGA..................................................................... 24 1 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................AGAGCTAGTGTAGCGAATTCAC...................................... 22 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................................TCGAGAGGGCTGCAGAGCT...................................................... 19 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAATAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
....................................................................................................................TACAGAGCTAGTGTAGCGAATT......................................... 22 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAAAAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTGACAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGATGG................................................................ 25 1 5 0.20 1 0 1 0 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAAGCT........................................................................ 21 0 5 0.20 1 0 0 0 1 0 0 0 0 0
.....................................................................................................AAAGCTCGAGAGGGCTGCAGAGC....................................................... 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGTG................................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................................................................GTTACAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
......................................................................................TAGGGTAACAACAACAAAGCTCGAGAG.................................................................. 27 1 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGGC................................................................ 25 1 5 0.20 1 0 0 0 0 1 0 0 0 0
...............................................................................................................AGGGCTGCATAGCTAGTGTAGCGAATT......................................... 27 1 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................TGGGGTAACAACAACAAACTTCGAA.................................................................... 25 3 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAAAAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...................................................................................................................CTGCAGAGCTAGTGTAGCGAA........................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................AGAGCTAGTGTGGCGAATTCACA..................................... 23 1 5 0.20 1 0 0 1 0 0 0 0 0 0
........................................AATTGCCACAGCAATGCATGCGCCG.................................................................................................................. 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................TCGGTTGGCGAAGTGGAGTGGGGTAACAAC................................................................................. 30 0 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGTT................................................................ 25 2 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACTACAAAGCTCGAGAGGG................................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0
......................................................................................................AAGCTCGAGAGGGCTGCAGAGCTAG.................................................... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0
...................................................CAATGCATGCGCCGG................................................................................................................. 15 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGGGG................................................................. 24 1 5 0.20 1 0 0 0 1 0 0 0 0 0
..........................................................................................TTAACAACAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
....................................................................................................................TACAGAGCTAGTGTAGCGAATTCACA..................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................................................AGTGGGGTAACAACA................................................................................ 15 0 5 0.20 1 0 0 1 0 0 0 0 0 0
......................................................................................................................CAGAGCTAGTGTAGCGAATTCACA..................................... 24 0 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................TTGCCACAGCAATGCATGCGCCGGA................................................................................................................ 25 1 5 0.20 1 1 0 0 0 0 0 0 0 0
....................................................................................................................TGCAGAGCTAGTGTAGCGAACTCACA..................................... 26 1 5 0.20 1 0 0 1 0 0 0 0 0 0
.......TGCCACCGCGAAGACAAAG......................................................................................................................................................... 19 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCAAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAACCTCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTCGAGAGACT............................................................... 26 3 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................GTAACAAAAACAAAGCTCGAGAGG................................................................. 24 1 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................................................................GGGGTAACAACAACAAAGCTCGAGAGG................................................................. 27 0 5 0.20 1 0 0 0 0 0 1 0 0 0
.................................................................................................CAACAAAGCTCGAGAGG................................................................. 17 0 5 0.20 1 0 0 0 1 0 0 0 0 0
..........................................................................................................TCGAGAGGGCTGCAGAGCTAGTGTAGC.............................................. 27 0 5 0.20 1 0 0 0 0 0 1 0 0 0
..............................................................................................CAACAACAAAGCTCGAGAGGGCT.............................................................. 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGATCGAGAGG................................................................. 24 1 5 0.20 1 0 1 0 0 0 0 0 0 0
................................................................GGTGTCGGTTGGCGAAG.................................................................................................. 17 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..................................................................................................AACAAAGCTCGAGAGGGCTGC............................................................ 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0
..........................................................................................GTAACAACAACAAAGCTC....................................................................... 18 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.................................................................................................................GGCTGCAGAGCTAGTGTAGCGAATT......................................... 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................GCAGAGCTAGTGTAGCGAATT......................................... 21 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.........................................................................TGGCGAAGTGGAGTGGG......................................................................................... 17 0 5 0.20 1 0 1 0 0 0 0 0 0 0
..........................................................................................ATAACAACAACAAAGCTCGAGAG.................................................................. 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0
....................................................................TCGGTTGGCGAAGTGGAG............................................................................................. 18 0 5 0.20 1 0 0 0 1 0 0 0 0 0
.......TGCCACCGCGAAGACA............................................................................................................................................................ 16 0 5 0.20 1 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr2h_Mrandom_015:118350-118528 - dsi_80 ATTCTA--TTGTGTGCATTTCGTTACACTTGGTTTTTTATG--------------------------------TGAATTCGCTACACTAGCTCTGCAGCCCTCTCGAGCTTTGTTGTTGTTACCCCACTCCACTTCGCCAACCGACACCGGCGCATGCATTGCTGTGGCAATTTTGTATTTTTT-----TCTCTTTGTCTTCGCGGTGGCAAATTTTA
droSec2 scaffold_122:41131-41339 + ATTCTA--TTATGTGCATTTCGTTCCACT------TTTGTGCATCATCGGGACTCTGTCGCTTCATTTAAACTGGAATTCGCTGCGTTAGCTTCACAGCCCTCTGGAGCT-TGTTGTTGTTGCACCACTCCACTTTGCTACCCGATACCGGCGCATGCATTGCTGTGGCAATTTTTTGCCTTTTATATATCTCTTTCACTTTGCTGTGGCAGTTTTTG
dm3 chr3LHet:284762-284970 - GTTCTA--TTGTGTGCATTTCGTTCCACT------TTTGTGCATCATCGGGACACTGTCGTTTCATTGAAACTTGAATTCGCTACATTAGCAACACAGCCCTCTCGAGCT-TGTTGTTGTTGCCCCACTCCACTTCGCTACCCGATACCGGCGCATGCATTGCCGTGGCAATTTTGTGCCTTTTATATATCTCTTTGTCTTTGCTGTGGCAGTTTTTG
droEre2 scaffold_4845:1764120-1764328 - ATTCTA--TTGTGTACATTTCGTTCCACT------TTTGTGCATCATCGGGGCACTGTCATTTCATTTAAACTTGAATTCGCTGCATTAGCTTCACAGCCCTCTCGACCT-TGTTGTTGTTGCCCCACTCCACTCTGCTACCCGATACCGGCGCATGCATTGCTGGGGCAATTTTGTGCCTTTTATATATCTCTTTGTCCTTGCTGCGGCAGTTTTTG
droYak3 v2_chrX_random_058:13857-14068 - ACTCCACTTTGTGCGCATTTCGTTCCATT------TTTGTACATCAGCGGGACACTGTCGTTTCAGTTAAACTCAAGCTCACTACATTGGCTCCGCAGCCCTCCCAAGCTTTGTTGTTTTTGACCCACTCCACTTCGCTACCCGATACTGGCGCATGCATTGCTGTGACAATTTTGTGCCTTTTATTTATCTCTTTGTCTTTGCTGTGGCAATTTTTG
droAna3 scaffold_12947:1548528-1548540 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCAAATTCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
ATTCTA--TTGTGTGCATTTCGTTACACTTGGTTTTTTATG--------------------------------TGAATTCGCTACACTAGCTCTGCAGCCCTCTCGAGCTTTGTTGTTGTTACCCCACTCCACTTCGCCAACCGACACCGGCGCATGCATTGCTGTGGCAATTTTGTATTTTTT-----TCTCTTTGTCTTCGCGGTGGCAAATTTTASizeHit CountTotal NormTotalV044
Embryo
M023
Head
M024
Male-body
M025
Embryo
O001
Testis
O002
Head
M053
Female-body
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTGC..........................................................................................................................25556.202810000008736773573
...........................................................................................TCTGCAGCCCTCTCGAGCTTTG.........................................................................................................22532.0016000000082916433925
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTGCA.........................................................................................................................26528.601430000000333646280
............................TTGGTTTTTTATG--------------------------------TGAATTCGCTACAC...................................................................................................................................27125.00250000001272130
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTGCAGC.......................................................................................................................28521.801090000000303920200
.............................TGGTTTTTTATG--------------------------------TGAATTCGCTACAC...................................................................................................................................26113.00130000001200100
.............................TGGTTTTTTATG--------------------------------TGAATTCGCTACACT..................................................................................................................................27113.0013000001002370
............................TTGGTTTTTTATG--------------------------------TGAATTCGCTACACT..................................................................................................................................28112.0012000100032240
..................................................................................................................................................ACCGGCGCATGCATTGCTGTGGCAATT.............................................2758.604300000008810152
..................................................................................TACACTAGCTCTGCAGCCCTCTCGAGC.............................................................................................................2758.40421004000228520
.......................................................................................................................................................................................T-----TCTCTTTGTCTTCGCGGTGG.........2138.3325000000034981
............................TTGGTTTTTTATG--------------------------------TGAATTCGCTACA....................................................................................................................................2618.008000000023120
.................................................................................................................TTGTTGTTACCCCACTCCACTTCGCCA..............................................................................2757.603800000001214660
....................................................................................CACTAGCTCTGCAGCCCTCTCGAGC.............................................................................................................2557.603800018000106400
.................................................................................................................TTGTTGTTACCCCACTCCACTTCGCC...............................................................................2656.603300000006125100
.................................................................................................................TTGTTGTTACCCCACTCCACTTCGC................................................................................2556.4032000000086990
............................................................................................................................................................................TTTGTATTTTTT-----TCTCTTTGTCTTCGC..............2735.6717000000009431
...........................................................................................TCTGCAGCCCTCTCGAGCTTTGTTG......................................................................................................2555.60280000004001221
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTGCAG........................................................................................................................2755.40270000000515520
..............................................................................................................................................................................TGTATTTTTT-----TCTCTTTGTCTTCGCGG............2735.3316000000146221
...........................................................................................TCTGCAGCCCTCTCGAGCTTTGTTGT.....................................................................................................2655.00251000004101513
................................................................................................................................................................................TATTTTTT-----TCTCTTTGTCTTCGCGG............2535.0015000000135231
.........................................................................TGAATTCGCTACACTAGCTCTGCAGC.......................................................................................................................2654.4022000100242751
.......................................................................................................................................................................................T-----TCTCTTTGTCTTCGCGGTGGCAAA.....2534.3313000000022720
.................................................................................................................TTGTTGTTACCCCACTCCACTTCGCCAA.............................................................................2854.2021000000093630
.............................................................................................TGCAGCCCTCTCGAGCTTTGTTGT.....................................................................................................2454.00200000002001017
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTCGCGGTGG.........2634.00120000000001020
.....................................................................................................................TGTTACCCCACTCCACTTCGCCAAC............................................................................2554.00200001300510001
..........................ACTTGGTTTTTTATG--------------------------------TGAATTCGC........................................................................................................................................2414.004000000001300
................................................................................................................................................................................TATTTTTT-----TCTCTTTGTCTTCGCGGT...........2634.0012000100030332
..................................................................................TACACTAGCTCTGCAGCCCTCTCGA...............................................................................................................2553.8019000000075340
.............................................................................................TGCAGCCCTCTCGAGCTTTGTTG......................................................................................................2353.60180000002000016
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTG...........................................................................................................................2453.4017000000136430
.............................................................................................................................................................................TTGTATTTTTT-----TCTCTTTGTCTTCGCGG............2833.3310000000014140
.............................................................................................TGCAGCCCTCTCGAGCTTTG.........................................................................................................2053.20160000002003110
..................................................................................................................................................ACCGGCGCATGCATTGCTGTGGCAAT..............................................2653.00150000001011111
.............................TGGTTTTTTATG--------------------------------TGAATTCGCTACACTA.................................................................................................................................2813.003000000000030
.............................TGGTTTTTTATG--------------------------------TGAATTCGCTACA....................................................................................................................................2513.003000000011100
....................................................................................................................................................CGGCGCATGCATTGCTGTGGCAATT.............................................2553.0015000000040335
...........................................................................................TCTGCAGCCCTCTCGAGCT............................................................................................................1953.0015000000037122
..............................................................................................................................................................................TGTATTTTTT-----TCTCTTTGTCTTCGCGGT...........2833.009000000023220
................................TTTTTTATG--------------------------------TGAATTCGCTACACTAGC...............................................................................................................................2713.003000000111000
............................................................................................................................................................................TTTGTATTTTTT-----TCTCTTTGTCTTCGCGG............2932.678000000031301
.............................................................................................................................................................................TTGTATTTTTT-----TCTCTTTGTCTTCGC..............2632.337000000103210
.................................................................................................................................................CACCGGCGCATGCATTGCTGTGGCAATT.............................................2842.259000000022050
...........................................................................................TCTGCAGCCCTCTCGAGCTTTGT........................................................................................................2352.2011000000600203
...........................................................................................TCTGCAGCCCTCTCGAGCTT...........................................................................................................2052.2011000000011225
..............................................................................................................................................................................TGTATTTTTT-----TCTCTTTGTCTTCGC..............2532.006000000020130
............................TTGGTTTTTTATG--------------------------------TGAATTCGCTACACTAGC...............................................................................................................................3112.002000000011000
...........................CTTGGTTTTTTATG--------------------------------TGAATTCGCTACACT..................................................................................................................................2912.002000000001010
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTGCAGCC......................................................................................................................2952.0010000000112420
ATTCTA--TTGTGTGCATTTCGTTACA...............................................................................................................................................................................................2512.002000000002000
.................TTTCGTTACACTTGGTTTTTTATG--------------------------------TGA..............................................................................................................................................2712.002000000000200
.......................................................................................................................................................................................T-----TCTCTTTGTCTTCGCGGTGGCA.......2332.006000000002130
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCT............................................................................................................................2351.809000000011313
...........................................................................................TCTGCAGCCCTCTCGAGC.............................................................................................................1851.809000000042003
..............................................................................................GCAGCCCTCTCGAGCTTTG.........................................................................................................1951.809000000000009
.......................................................................................TAGCTCTGCAGCCCTCTCGAGCTT...........................................................................................................2451.809000000200007
..............................................................................................................................................CGACACCGGCGCATGCATTGCTGT....................................................2441.757000000010006
...................................................................................................................................................................................TTTTT-----TCTCTTTGTCTTCGCGGTGG.........2531.675000000011300
...........................................................................................................................................................................TTTTGTATTTTTT-----TCTCTTTGTCTT.................2531.675000000001040
................................................................................................................................................................................TATTTTTT-----TCTCTTTGTCTTCGCGGTGG.........2831.675000000011030
......................................................................................................................................................................................TT-----TCTCTTTGTCTTCGCGGTGG.........2231.675000000020030
..............................................................................................GCAGCCCTCTCGAGCTTTGTTG......................................................................................................2251.608000000000008
...................................................................................................................................................CCGGCGCATGCATTGCTGTGGCAATT.............................................2651.608000000021050
.................................................................................................................................................CACCGGCGCATGCATTGCTGTGGCAA...............................................2641.506000000001005
................................................................................................AGCCCTCTCGAGCTTTGTTGTTGT..................................................................................................2451.407000000000403
....................................................................................................................................................CGGCGCATGCATTGCTGTGGCAAT..............................................2451.407000000100105
.....................................................................................................................TGTTACCCCACTCCACTTCGCCAACC...........................................................................2651.407000150100000
...........................................................................................TCTGCAGCCCTCTCGAGCTTT..........................................................................................................2151.407000000020113
.....................................................................................................................TGTTACCCCACTCCACTTCGCCAACCGAC........................................................................2951.407000400300000
.....................................................................................................................TGTTACCCCACTCCACTTCGCCAACCGA.........................................................................2851.407100000300120
.......................................TG--------------------------------TGAATTCGCTACACTAGCTC.............................................................................................................................2251.407000050000011
.......................................................................................................................................................................................T-----TCTCTTTGTCTTCGCGGTGGC........2231.334000000010201
....................................................................................................................................................................................TTTT-----TCTCTTTGTCTTCGCGGTGG.........2431.334000000002110
.....................................................................................................................................................................................TTT-----TCTCTTTGTCTTCGCGGTGG.........2331.334000000002200
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTCGCGGT...........2431.334000000000400
................................................................................................AGCCCTCTCGAGCTTTGTTGTTGTT.................................................................................................2551.206000000002211
.............................................................................................TGCAGCCCTCTCGAGCTTTGTTGTTG...................................................................................................2651.206000000000231
..........................ACTTGGTTTTTTATG--------------------------------TGAATTCGCTACAC...................................................................................................................................2911.001000000000010
......................................................................................................................................................................................TT-----TCTCTTTGTCTTCGCGGTGGCAAA.....2631.003000000001110
..........GTGTGCATTTCGTTAC................................................................................................................................................................................................1611.001000000000001
..................................TTTTATG--------------------------------TGAATTCGCTACACTAGCTCTG...........................................................................................................................2911.001000000001000
................................TTTTTTATG--------------------------------TGAATTCGCTACACTAG................................................................................................................................2611.001000000010000
.................TTTCGTTACACTTGGTTTTTTATG--------------------------------TGAA.............................................................................................................................................2811.001000000000010
...................TCGTTACACTTGGTTTTTTATG--------------------------------TGAATT...........................................................................................................................................2811.001000000000010
............................................................................................................................................................................TTTGTATTTTTT-----TCTCTTTGTCTTC................2531.003000200000010
...........................CTTGGTTTTTTATG--------------------------------TGAATTCGCTACAC...................................................................................................................................2811.001000000010000
..........................ACTTGGTTTTTTATG--------------------------------TGAATTCG.........................................................................................................................................2311.001000000000010
.....................................TATG--------------------------------TGAATTCGCTACACTAGCTCTGC..........................................................................................................................2711.001000000100000
.........................CACTTGGTTTTTTATG--------------------------------TGAATTCGC........................................................................................................................................2511.001000000010000
.......................TACACTTGGTTTTTTATG--------------------------------TGAATTCGC........................................................................................................................................2711.001000000001000
.............TGCATTTCGTTACACTTGGTTTTTT....................................................................................................................................................................................2511.001000000000010
.............................TGGTTTTTTATG--------------------------------TGAATTCGCTACACTAGC...............................................................................................................................3011.001000000010000
.......................................................................................TAGCTCTGCAGCCCTCTCGAGCTTTG.........................................................................................................2651.005000000300002
..................TTCGTTACACTTGGTTTTTTATG--------------------------------TGA..............................................................................................................................................2611.001000000000010
............................TTGGTTTTTTATG--------------------------------TGA..............................................................................................................................................1611.001000000000010
.................................................................................................................................................CACCGGCGCATGCATTGCTGTGGCAAT..............................................2741.004000000100102
............................TTGGTTTTTTATG--------------------------------TGAATTCGCTA......................................................................................................................................2411.001000000000100
..................................TTTTATG--------------------------------TGAATTCGCTACACTAGCTC.............................................................................................................................2711.001000000001000
.................TTTCGTTACACTTGGTTTTTTA...................................................................................................................................................................................2211.001000000000010
............................TTGGTTTTTTATG--------------------------------TGAATTCGCTACACTA.................................................................................................................................2911.001000000010000
.................................................................................................................TTGTTGTTACCCCACTCCACTTCGCCAAC............................................................................2951.005000000031010
.........................CACTTGGTTTTTTATG--------------------------------TGAATTCGCTA......................................................................................................................................2711.001000000000010
.......................TACACTTGGTTTTTTATG--------------------------------TGAATTCGCTA......................................................................................................................................2911.001000000001000
..................................TTTTATG--------------------------------TGAATTCGCTACACTAGC...............................................................................................................................2511.001000000010000
.....................................TATG--------------------------------TGAATTCGCTACACTAGCTCTGCA.........................................................................................................................2811.001000000000100
.....A--TTGTGTGCATTTCGTTA.................................................................................................................................................................................................1811.001000000000001
.............................................................................................TGCAGCCCTCTCGAGCTTTGTTGTTGT..................................................................................................2751.005000000001211
..................................................................................TACACTAGCTCTGCAGCCCTCTCGAG..............................................................................................................2651.005000000022010
...........................................................................................................................................AACCGACACCGGCGCATGCATTGCT......................................................2541.004000000012010
...................................................................................................................................................................TGTGGCAATTTTGTATTTTTT-----TCTCTT.......................2731.003000000000120
.................................................................................................................TTGTTGTTACCCCACTCCACTTCG.................................................................................2451.005000000040100
.........................................................................TGAATTCGCTACACTAGCTCTGCAGCC......................................................................................................................2750.804000000002020
.............................................................................................................................................................................................TCTCTTTGTCTTCGCGGTGGCAAA.....2450.804000000001120
.....................................................................................................TCTCGAGCTTTGTTGTTGTTACCCCAC..........................................................................................2750.804000000011200
..................................................................................TACACTAGCTCTGCAGCCCTCTCGAGCT............................................................................................................2850.804000300100000
.....................................................................................................................................................GGCGCATGCATTGCTGTGGCAATT.............................................2450.804000000001021
..................................................................................TACACTAGCTCTGCAGCCCTCTCG................................................................................................................2450.804000000031000
.............................................................................................................................................................................................TCTCTTTGTCTTCGCGGTGG.........2050.804000000030001
...........................................................................................................................................AACCGACACCGGCGCATGCATTGCTG.....................................................2640.753000000000120
..............................................................................................................................................CGACACCGGCGCATGCATTGCTGTGGCAATT.............................................3140.753000000021000
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTC................1930.672000000000002
....................................................................................................................................................................................TTTT-----TCTCTTTGTCTTCGCGGTGGC........2530.672000000020000
.....................................................................................................................................................................................TTT-----TCTCTTTGTCTTCGCGGTGGC........2430.672000000100100
.....................................................................................................................................................................TGGCAATTTTGTATTTTTT-----TCTCTT.......................2530.672000000000200
................................................................................................................................................................................TATTTTTT-----TCTCTTTGTCTTCGCGGTG..........2730.672000000010010
....................................................................................................................................................................................TTTT-----TCTCTTTGTCTTCGCGGTGGCA.......2630.672000000000011
...................................................................................................................................................................TGTGGCAATTTTGTATTTTTT-----TCTC.........................2530.672000000001010
.....................................................................................................................................................................................TTT-----TCTCTTTGTCTTCGCGGTGGCAA......2630.672000000010010
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTCGCGGTG..........2530.672000000010100
.............................................................................................TGCAGCCCTCTCGAGCTTTGTT.......................................................................................................2250.603000000000003
.......................................................................................TAGCTCTGCAGCCCTCTCGA...............................................................................................................2050.603000000020001
.......................................................................................................TCGAGCTTTGTTGTTGTTACCCCACT.........................................................................................2650.603000000002100
.............................................................................TTCGCTACACTAGCTCTGCAGCCC.....................................................................................................................2450.603000200000100
...........................................................................................TCTGCAGCCCTCTCGAGCTTTGTT.......................................................................................................2450.603000000100002
..................................................................................TACACTAGCTCTGCAGCCCTC...................................................................................................................2150.603000000001110
.............................................................................................TGCAGCCCTCTCGAGCTTTGTTGTT....................................................................................................2550.603000000000201
.............................................................................................TGCAGCCCTCTCGAGCT............................................................................................................1750.603000000000003
...............................................................................................................................................................................................TCTTTGTCTTCGCGGTGGCA.......2050.603000000001011
......................................ATG--------------------------------TGAATTCGCTACACTAGCTCTGC..........................................................................................................................2650.603000000000111
..................................................................................TACACTAGCTCTGCAGCCCTCT..................................................................................................................2250.603000000001020
.............................................................................................................................................................................................TCTCTTTGTCTTCGCGGTGGC........2150.603000000000300
...........................................................................................TCTGCAGCCCTCTCGA...............................................................................................................1650.603000000000003
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTGCAGCCC.....................................................................................................................3050.603000000012000
.........................................................................TGAATTCGCTACACTAGCTCTGCAG........................................................................................................................2550.603000000011010
................................................................................................AGCCCTCTCGAGCTTTGTTG......................................................................................................2050.603000000000003
..............................................................................................GCAGCCCTCTCGAGCTTTGTTGT.....................................................................................................2350.603000000100002
..............................................................................................................................................CGACACCGGCGCATGCATTGCT......................................................2240.502000000001001
..........................................................................................................................................CAACCGACACCGGCGCATGCATTGCTGT....................................................2840.502000000020000
............................................................................................................................................ACCGACACCGGCGCATGCATTGCTG.....................................................2540.502000000000020
.................................................................................................................................................CACCGGCGCATGCATTGCTGTGGC.................................................2440.502000000100001
....................................................................................CACTAGCTCTGCAGCCCTCTCGAGCTT...........................................................................................................2750.402000000100001
.................................................................................................................TTGTTGTTACCCCACTCCACTTC..................................................................................2350.402000000000110
................................................................................................AGCCCTCTCGAGCTTTGTTGT.....................................................................................................2150.402000000000002
......................................ATG--------------------------------TGAATTCGCTACA....................................................................................................................................1650.402000000000002
...................................................................................ACACTAGCTCTGCAGCCCTCTCGAGC.............................................................................................................2650.402000000001100
.............................................................................................TGCAGCCCTCTCGAGC.............................................................................................................1650.402000000000002
.......................................TG--------------------------------TGAATTCGCTACACTAGCTCTGCAGCCCT....................................................................................................................3150.402000000001010
.....................................................................................................................TGTTACCCCACTCCACTTCGCCA..............................................................................2350.402000000100001
.........................................................................TGAATTCGCTACACTAGCTCTGCAGCCC.....................................................................................................................2850.402000000001010
.....................................................................................................................TGTTACCCCACTCCACTTCGCC...............................................................................2250.402000000000002
.....................................................................................................................................................GGCGCATGCATTGCTGTGGCAATTTT...........................................2650.402000000000110
...............................................................................................................................................................................................TCTTTGTCTTCGCGGTG..........1750.402000000000002
.............................................................................TTCGCTACACTAGCTCTGCAGCCCTCT..................................................................................................................2750.402000000101000
.....................................................................................................................................................GGCGCATGCATTGCTGT....................................................1750.402000000000002
.............................................................................TTCGCTACACTAGCTCTGCAGCCCTCTC.................................................................................................................2850.402000000001100
.................................................................................CTACACTAGCTCTGCAGCCCTCTCGAGC.............................................................................................................2850.402000100010000
...................................................................................................................................................CCGGCGCATGCATTGCTGTGGCAATTT............................................2750.402000000100001
..............................................................................................GCAGCCCTCTCGAGCTT...........................................................................................................1750.402000000000002
...............................................................................................................................................................................................TCTTTGTCTTCGCGGTGG.........1850.402000000001100
...........................................................................................TCTGCAGCCCTCTCGAGCTTTGTTGTT....................................................................................................2750.402000000001100
.................................................................................................GCCCTCTCGAGCTTTGTTGT.....................................................................................................2050.402000000000002
........................................................................................................CGAGCTTTGTTGTTGTTACCCCACT.........................................................................................2550.402000000000200
...................................................................................................................................................CCGGCGCATGCATTGCTGTGGCAAT..............................................2550.402000000000002
...............................................................................................................................................................................................TCTTTGTCTTCGCGGTGGC........1950.402000000000110
...............................................................................................................................................................................GTATTTTTT-----TCTCTTTGTCTTCGCGG............2630.331000000010000
.....................................................................................................................................................................TGGCAATTTTGTATTTTTT-----TCTCTTT......................2630.331000000000100
.......................................................................................................................................................................................T-----TCTCTTTGTCTTCGCGGTGGCAA......2430.331000000001000
................................................................................................................................................................................TATTTTTT-----TCTCTTTGTCTTC................2130.331000000000001
......................................................................................................................................................................................TT-----TCTCTTTGTCTTCGCGGTG..........2130.331000000001000
...................................................................................................................................................................TGTGGCAATTTTGTATTTTTT-----TCTCT........................2630.331000000000100
...............................................................................................................................................................................GTATTTTTT-----TCTCTTTGTCTTCGCGGT...........2730.331000000000100
.........................................................................................................................................................................AATTTTGTATTTTTT-----TCTCTTTGTCTT.................2730.331000000001000
...........................................................................................................................................................................TTTTGTATTTTTT-----TCTCTTTGTC...................2330.331000000001000
.....................................................................................................................................................................................TTT-----TCTCTTTGTCTTCGCGGTGGCAAA.....2730.331000000000010
.................................................................................................................................................................................ATTTTTT-----TCTCTTTGTCTTCGCGGT...........2530.331000000000001
.......................................................................................................................................................................................T-----TCTCTTTGTCTTCGCGGTGGCAAAT....2630.331000000000001
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTCGCGG............2330.331000000001000
......................................................................................................................................................................................TT-----TCTCTTTGTCTTCGC..............1730.331000000000001
....................................................................................................................................................................................TTTT-----TCTCTTTGTCTTCGCGGTG..........2330.331000000001000
.....................................................................................................................................................................................TTT-----TCTCTTTGTCTTCGC..............1830.331000000000001
.....................................................................................................................................................................TGGCAATTTTGTATTTTTT-----TCTCTTTG.....................2730.331000000000010
....................................................................................................................................................................................TTTT-----TCTCTTTGTCTTCGC..............1930.331000000000001
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTCGCGGTGGC........2730.331000000001000
...................................................................................................................................................................................TTTTT-----TCTCTTTGTCTTCGCGGT...........2330.331000000000001
.........................................................................................................................................................................AATTTTGTATTTTTT-----TCTCTTTGTC...................2530.331000000010000
.....................................................................................................................................................................................TTT-----TCTCTTTGTCTTCGCGGTGGCA.......2530.331000000000010
.................................................................................................................................................................................ATTTTTT-----TCTCTTTGTCTTCGCGGTGG.........2730.331000000000100
....................................................................................................................................................................................TTTT-----TCTCTTTGTCTTCGCGG............2130.331000000000010
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTCGC..............2130.331000000000001
............................................................................................................................................................................TTTGTATTTTTT-----TCTCTTTGTCTTCG...............2630.331000000000100
...........................................................................................................................................................................TTTTGTATTTTTT-----TCTCTTTGTCTTC................2630.331000000000010
.....................................................................................................................................................................................TTT-----TCTCTTTGTCTTCGCGGTGGCAAAT....2830.331000000000100
...............................................................................................................................................................................GTATTTTTT-----TCTCTTTGTCTT.................2130.331000000000001
...................................................................................................................................................................TGTGGCAATTTTGTATTTTTT-----TCT..........................2430.331000000000010
................................................................................................................................................................................TATTTTTT-----TCTCTTTGTCTTCG...............2230.331000000001000
.............................................................................................................................................................................TTGTATTTTTT-----TCTCTTTGTCTTCGCG.............2730.331000000000100
..................................................................................................................................................................................TTTTTT-----TCTCTTTGTCTTCGCG.............2230.331000000000100
...............................................................................................................................................GACACCGGCGCATGCATTGCTGTGGC.................................................2640.251000000100000
............................................................................................................................................ACCGACACCGGCGCATGCATTGCTGT....................................................2640.251000000000001
.......................................................................................................................................................CGCATGCATTGCTGTGGCAATTTTGTA........................................2740.251000000000010
....TA--TTGTGTGCATTTCGTT..................................................................................................................................................................................................1840.251000000000010
...................................................................................................................................................................................TTTTT-----TCTCTTTGTCTT.................1740.251000000000001
...........................................................................................................................................................TGCATTGCTGTGGCAATTTTGTA........................................2340.251000000000100
.....................................................................................................................................................GGCGCATGCATTGCTGTGGCAATTTTGTA........................................2940.251000000001000
...CTA--TTGTGTGCATTTCGT...................................................................................................................................................................................................1840.251000000000001
.............................................................................................................................................CCGACACCGGCGCATGCATT.........................................................2040.251000000000001
..............................................................................................................................................CGACACCGGCGCATGCATTGCTGTGGC.................................................2740.251000000100000
............................................................................................................................................ACCGACACCGGCGCATGCATTGCTGTGG..................................................2840.251000000000100
...............................................................................................................................................GACACCGGCGCATGCATTGCTGT....................................................2340.251000000000001
..............................................................................................................................................CGACACCGGCGCATGCATTGCTGTGG..................................................2640.251000000000010
...............................................................................................................................................GACACCGGCGCATGCATTGCTGTGGCAATT.............................................3040.251000000010000
....................................................................................................................................................CGGCGCATGCATTGCTGTGGCAATTTTG..........................................2840.251000000001000
...........................................................................................................................................AACCGACACCGGCGCATGCATTGCTGT....................................................2740.251000000000010
..............................................................................................................................................CGACACCGGCGCATGCATTG........................................................2040.251100000000000
.........................................................................................................................................................CATGCATTGCTGTGGCAATTTTGTA........................................2540.251000000000100
............................................................................ATTCGCTACACTAGCTCTGCAGCCC.....................................................................................................................2550.201000000000010
....................................................................................CACTAGCTCTGCAGCCCTCTCGAG..............................................................................................................2450.201000000010000
..................................................................................................................TGTTGTTACCCCACTCCACTTCGCCAAC............................................................................2850.201000000000010
................................................................................................................................................................TGCTGTGGCAATTTTGTATT......................................2050.201000000010000
........................................................................................................................TACCCCACTCCACTTCGCCAACCGACACC.....................................................................2950.201000000001000
............................................................................ATTCGCTACACTAGCTCTGC..........................................................................................................................2050.201000000000001
.......................................TG--------------------------------TGAATTCGCTACAC...................................................................................................................................1650.201000000000001
...........................................................................................TCTGCAGCCCTCTCGAGCTTTGTTGTTG...................................................................................................2850.201000000001000
.................................................................................................................................................................................................TTTGTCTTCGCGGTGGCAAA.....2050.201000000000001
....................................................................................................CTCTCGAGCTTTGTTGT.....................................................................................................1750.201000000000001
.............................................................................................................................................................................................TCTCTTTGTCTTCGCGGTGGCA.......2250.201000000100000
................................................................................................................................TCCACTTCGCCAACCGACACCGGCG.................................................................2550.201000000001000
..........................................................................................................................CCCCACTCCACTTCGCCAACCGACACC.....................................................................2750.201000000100000
.......................................................................................TAGCTCTGCAGCCCTCTCGAGCTTTGTTG......................................................................................................2950.201000000100000
...............................................................................CGCTACACTAGCTCTGCAGCCCTCTCGAGC.............................................................................................................3050.201000000010000
droSec2
ATTCTA--TTATGTGCATTTCGTTCCACT------TTTGTGCATCATCGGGACTCTGTCGCTTCATTTAAACTGGAATTCGCTGCGTTAGCTTCACAGCCCTCTGGAGCT-TGTTGTTGTTGCACCACTCCACTTTGCTACCCGATACCGGCGCATGCATTGCTGTGGCAATTTTTTGCCTTTTATATATCTCTTTCACTTTGCTGTGGCAGTTTTTGSizeHit CountTotal NormTotalV113
Male-body
V114
Embryo
V115
Head
M054
Female-body
.........................................................................................................................................................................AATTTTTTGCCTTTTATATATCTCT........................25120.0810001
droEre2
ATTCTA--TTGTGTACATTTCGTTCCACT------TTTGTGCATCATCGGGGCACTGTCATTTCATTTAAACTTGAATTCGCTGCATTAGCTTCACAGCCCTCTCGACCT-TGTTGTTGTTGCCCCACTCCACTCTGCTACCCGATACCGGCGCATGCATTGCTGGGGCAATTTTGTGCCTTTTATATATCTCTTTGTCCTTGCTGCGGCAGTTTTTGSizeHit CountTotal NormTotalV040
Embryo
V060
Head
V107
Male-body
V108
Head
M055
Female-body
M057
Embryo
.......................................................................................................................................................................................TATATATCTCTTTGTCCTTGCTG............2311.001000010
droYak3
ACTCCACTTTGTGCGCATTTCGTTCCATT------TTTGTACATCAGCGGGACACTGTCGTTTCAGTTAAACTCAAGCTCACTACATTGGCTCCGCAGCCCTCCCAAGCTTTGTTGTTTTTGACCCACTCCACTTCGCTACCCGATACTGGCGCATGCATTGCTGTGACAATTTTGTGCCTTTTATTTATCTCTTTGTCTTTGCTGTGGCAATTTTTGSizeHit CountTotal NormTotalV046
Embryo
V052
Head
V120
Male-body
V058
Head
M026
Head
M043
Female-body
M056
Embryo
.CTCCACTTTGTGCGCATTTCGTTCC................................................................................................................................................................................................2531.6750000041
...........................................................GTTTCAGTTAAACTCAAGCTCAC........................................................................................................................................2331.6750000050
...........................................................................................................................................................................................TATCTCTTTGTCTTTGCTGTGGC........2341.5060000060
...........................................................GTTTCAGTTAAACTCAAGCTCACTACA....................................................................................................................................2731.3340000040
...........................................................................................................................................................................................TATCTCTTTGTCTTTGCTGTGGCA.......2441.2550000050
...........................................................GTTTCAGTTAAACTCAAGCTCACT.......................................................................................................................................2430.6720000020
......................................................................................TTGGCTCCGCAGCCCTCCCAAGCTT...........................................................................................................2530.6720000020
...........................................................................................TCCGCAGCCCTCCCAAGCTTTG.........................................................................................................2230.6720000020
...........................................................GTTTCAGTTAAACTCAAGCTCACTAC.....................................................................................................................................2630.6720000020
.............................................................................................................................................................CATTGCTGTGACAATTTTGTGCCT.....................................2430.6720000200
.................................................................................................................TTGTTTTTGACCCACTCCACTTC..................................................................................2330.6720000020
...........................................................................................................................................................TGCATTGCTGTGACAATTTTGTGCC......................................2530.6720000011
.CTCCACTTTGTGCGCATTTCGTTCCAT..............................................................................................................................................................................................2730.3310000010
..................TTCGTTCCATT------TTTGTACATCAGCGG........................................................................................................................................................................2630.3310000010
...................................................................TAAACTCAAGCTCACTACATTGGCTC.............................................................................................................................2630.3310000010
................................................................................................................................TCCACTTCGCTACCCGATACTGGCGCA...............................................................2730.3310000010
.....................................................................................................................................TTCGCTACCCGATACTGGCGCATGCATT.........................................................2830.3310000010
..........................................................................................................................................TACCCGATACTGGCGCATGCATTGC.......................................................2530.3310000010
...........TGCGCATTTCGTTCCATT------TTTGTACATC.............................................................................................................................................................................2830.3310000010
...........................................................................................................................CCCACTCCACTTCGCTACCCGATACT.....................................................................2630.3310000010
.................................................................................................................................................TACTGGCGCATGCATTGCTGTGACAAT..............................................2730.3310000010
...........................................................................................................................................................................TTTTGTGCCTTTTATTTATCTCTT.......................2430.3310000010
...................................TTTGTACATCAGCGGGACACTGTC...............................................................................................................................................................2430.3310000010
...........................................................................................TCCGCAGCCCTCCCAAGCTTTGTTG......................................................................................................2530.3310000010
................................................................................................................................TCCACTTCGCTACCCGATACTGGCGCAT..............................................................2830.3310000010
..........................................................................................................AGCTTTGTTGTTTTTGACCCACTCC.......................................................................................2530.3310000010
.............................................................TTCAGTTAAACTCAAGCTCACTACA....................................................................................................................................2530.3310000010
...........................................................................................TCCGCAGCCCTCCCAAGCTTTGTTGT.....................................................................................................2630.3310000010
............................................................................................CCGCAGCCCTCCCAAGCTTTG.........................................................................................................2130.3310000010
.....................................................................................................................TTTTGACCCACTCCACTTCGCTACCCGA.........................................................................2830.3310000010
.................................................................................................................................CCACTTCGCTACCCGATACTGGCGCA...............................................................2630.3310000010
.CTCCACTTTGTGCGCATTTCGTT..................................................................................................................................................................................................2330.3310000010
............................................................TTTCAGTTAAACTCAAGCTCACTA......................................................................................................................................2430.3310000010
........TTGTGCGCATTTCGTTCCATT------TTTG...................................................................................................................................................................................2530.3310000010
.........................CATT------TTTGTACATCAGCGGGACACTG.................................................................................................................................................................2630.3310000010
...........................................................................................................................................................................................TATCTCTTTGTCTTTGCTGTGGCAATT....2740.2510000100
...........................................................................................................................................................................................TATCTCTTTGTCTTTGCTGTGG.........2240.2510000010
droAna3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCAAATTCTTSizeHit CountTotal NormTotalV105
Male-body
V106
Head
V055
Head
V039
Embryo
M044
Female-body
M058
Embryo
No Reads

Generated: 12/06/2013 at 02:30 PM