ID:

dsi_79

 Coordinate:

chr2h_Mrandom_003:92938-92992 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.4 -24.2 -24.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATAATGTCGGCTGCTACCTTCGTAAGGCGCAAATATTTTGTAGGCTGCAGTCTGTCTCCAGGAAACGTAAATTTCCAGTTTACCGTCAAATTCTGGAACAGACTTGACCATATAAAGGGGCTCATTACACTCAATGTTTGGATTCAATTCTATTT
***********************************(((((((((....(((((((.(((((((.(((((((((...)))))).)))....))))))))))))))...)).)))))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 SRR553486
Ovary		 SRR618934
Ovary		 SRR553488
Ovary		 M025
embryo
 SRR553487
Ovary		 M053
Female-body		 O001
Testis
................................................................................TTCCGTCGAATTCTGGAACAGACTT.................................................. 25 2 3 44.33 133 60 55 10 3 0 1 4 0
.................................................................................TCCGTCGAATTCTGGAACAGACTTTACCAT............................................ 30 3 3 26.33 79 58 21 0 0 0 0 0 0
...............................................................................TTTCCGTCGAATTCTGGAACAGACTT.................................................. 26 2 3 18.00 54 19 21 11 1 0 0 2 0
.................................................................................TCCGTCGAATTCTGGAACAGACTT.................................................. 24 2 3 12.33 37 20 9 6 0 0 0 2 0
...................................................................................................................AGGGGCTCATTACACTCAATGTTTGGA............. 27 0 3 11.33 34 10 16 0 6 0 2 0 0
.............................................................................................................................TACACTCAATGTTTGGATTCAATT...... 24 0 5 11.20 56 21 15 1 5 0 13 1 0
................................................................................TACCGTCAAATTCTGGAACAGACT................................................... 24 0 3 9.67 29 0 2 2 6 19 0 0 0
....................................................................................................................GGGGCTCATTACACTCAATGTTTGGA............. 26 0 3 8.67 26 10 12 0 3 0 1 0 0
.TAATGTCGGCTGCTACCTTCGTAAGGC............................................................................................................................... 27 0 9 6.67 60 27 25 8 0 0 0 0 0
.........................................................................................ATTCTGGAACAGACTTGACCATAT.......................................... 24 0 4 6.50 26 8 2 4 3 0 9 0 0
..................................................................................................................AAGGGGCTCATTACACTCAATGTTTGGA............. 28 0 3 4.33 13 8 3 0 0 0 2 0 0
................................................................................TTCCGTCGAATTCTGGAACAGACT................................................... 24 2 3 4.00 12 4 4 2 0 0 0 2 0
..................................................................................CCGTCGAATTCTGGAACAGACTTTACCAT............................................ 29 2 3 3.67 11 4 7 0 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTAAGG................................................................................................................................ 26 0 9 3.67 33 21 9 3 0 0 0 0 0
.................................................................................TCCGTCGAATTCTGGAACAGACTTTACCA............................................. 29 3 3 3.67 11 6 3 1 0 0 0 1 0
.........................................................................................ATTCTGGAACAGACTTGACCATA........................................... 23 0 4 3.50 14 7 1 1 0 0 1 0 4
.................................................................................TCCGTCGAATTCTGGAACAGACTTTACC.............................................. 28 3 3 3.00 9 6 3 0 0 0 0 0 0
..............................................................................TTTTCCGTCGAATTCTGGAACAGACTT.................................................. 27 2 3 3.00 9 6 3 0 0 0 0 0 0
...............................................................................TTACCGTCAAATTCTGGAACAGACT................................................... 25 0 3 3.00 9 0 2 0 1 5 1 0 0
.TAATGTCGGCTGCTACCTTCGTAAGGCGC............................................................................................................................. 29 0 9 2.78 25 14 11 0 0 0 0 0 0
................................................................................TTCCGTCGAATTCTGGAACAGACTTT................................................. 26 3 3 2.33 7 3 1 2 1 0 0 0 0
.................................................................................TCCGTCGAATTCTGGAACAGACTTTACCATA........................................... 31 3 3 2.33 7 5 2 0 0 0 0 0 0
.............................................TGCAGTCTGTCTCCAGGAAACGTAAA.................................................................................... 26 0 3 2.00 6 0 2 2 1 0 1 0 0
.........................................................................................ATTCTGGAACAGACTTGAGCATAT.......................................... 24 1 4 2.00 8 0 7 0 1 0 0 0 0
.........................................................................................ATTCTGGAACAGACTTGACCATATAA........................................ 26 0 1 2.00 2 0 0 0 0 0 0 2 0
.............................................................................................................................TACACTCAATGTTTGGATTCAAT....... 23 0 5 1.40 7 4 0 1 0 0 2 0 0
........................................TAGGCTGCAGTCTGTCTCCAGGAAACG........................................................................................ 27 0 3 1.33 4 0 2 1 1 0 0 0 0
.............................................................................................................................TACACTCAATGTTTGGATTCAATATT.... 26 2 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................CGTCGAATTCTGGAACAGACTTTACCAT............................................ 28 2 4 1.00 4 0 3 1 0 0 0 0 0
.................................................................................TCCGTCGAATTCTGGAACAGACTTTAC............................................... 27 3 3 1.00 3 2 1 0 0 0 0 0 0
.............................................................................................................................TACACTCAATGTTTGGATTCAATTTT.... 26 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................TCCGTCGAATTCTGGAACAGACTTT................................................. 25 3 3 1.00 3 1 1 0 0 0 0 1 0
.................................................................................TCCGTCGAATTCTGGAACAGACTTTA................................................ 26 3 3 1.00 3 0 2 1 0 0 0 0 0
........................................................................................................................CTCATTACACTCAATGTTTG............... 20 0 3 1.00 3 0 0 0 0 0 0 0 3
....................................................................................................................GGGGCTCATTACACTCAATGTTTGGAT............ 27 0 3 1.00 3 2 0 0 1 0 0 0 0
................................................................................TACCGTCAAATTCTGGAACAGACTT.................................................. 25 0 3 1.00 3 0 1 0 0 2 0 0 0
...............................................................................TTACCGTCAAATTCTGGAACAG...................................................... 22 0 10 1.00 10 0 0 0 0 0 0 0 10
.................................TATTTTGTAGGCTGCAGTCTGTCTC................................................................................................. 25 0 3 1.00 3 0 0 2 1 0 0 0 0
.........................................................................................ATTCTGGAACAGACTTGACCATATA......................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0
.............................................................................................................................TACACTCAATGTTTGGATTCAATTCTATT. 29 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................TTTACCGTCAAATTCTGGAACAGACT................................................... 26 0 3 1.00 3 0 0 0 1 2 0 0 0
....................................................................................GTCGAATTCTGGAACAGACTT.................................................. 21 1 4 1.00 4 0 0 4 0 0 0 0 0
................................................................................................................................ACTCAATGTTTGGATTCA......... 18 0 5 1.00 5 0 0 0 0 0 0 0 5
.....................................................................AATTTCCAGTTTACCGTCAAA................................................................. 21 0 3 1.00 3 0 2 1 0 0 0 0 0
......................................TGTAGGCTGCAGTCTGTCTCCAGGAAA.......................................................................................... 27 0 3 1.00 3 0 0 2 1 0 0 0 0
..................TTCGTAAGGCGCAAATATTTTGTAGGC.............................................................................................................. 27 0 8 1.00 8 3 3 1 0 0 0 1 0
.........................................................................................ATTCTGGAACAGACTTGACCATATAAA....................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0
.........................................................................................ATTCTGGAACAGACTT.................................................. 16 0 5 0.80 4 0 0 4 0 0 0 0 0
...................................................................................................................AGGGGCTCATTACACTCAATGTTTGGAT............ 28 0 3 0.67 2 1 0 0 1 0 0 0 0
..................................................................................................................AAGGGGCTCATTACACTCAATGTTTGG.............. 27 0 3 0.67 2 0 2 0 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTAAGGCG.............................................................................................................................. 28 0 9 0.67 6 2 3 1 0 0 0 0 0
...............................AATATTTTGTAGGCTGCAGTCTGTC................................................................................................... 25 0 3 0.67 2 0 1 1 0 0 0 0 0
...................................................................................................................AGGGGCTCATTACACTCAATGTTTGG.............. 26 0 3 0.67 2 2 0 0 0 0 0 0 0
............................................................................................................................TTACACTCAATGTTTGGATTCAATT...... 25 0 3 0.67 2 0 1 0 1 0 0 0 0
................................................................................TTCCGTCGAATTCTGGAACAGACTTTACCAT............................................ 31 3 3 0.67 2 2 0 0 0 0 0 0 0
..............................................................................TTTTCCGTCGAATTCTGGAACAGACT................................................... 26 2 3 0.67 2 0 1 1 0 0 0 0 0
.TAATGTCGGCTGCTACCT........................................................................................................................................ 18 0 12 0.67 8 1 7 0 0 0 0 0 0
...........TGCTACCTTCGTAAGGCGCAAA.......................................................................................................................... 22 0 8 0.63 5 0 0 5 0 0 0 0 0
............................................................................TGTTTTCCGTCGAATTCTGGAACAGACTT.................................................. 29 3 5 0.60 3 0 1 0 0 0 0 2 0
ATAATGTCGGCTGCTACCTTCGTAAGGC............................................................................................................................... 28 0 9 0.56 5 3 2 0 0 0 0 0 0
.........................................................................................ATTCTGGAACAGACTTGACCAT............................................ 22 0 4 0.50 2 1 0 1 0 0 0 0 0
......TCGGCTGCTACCTTCGTAAGGCGCAAA.......................................................................................................................... 27 0 8 0.50 4 1 2 0 0 0 1 0 0
...................................................................................................................AGGGGCTCATTACACTCAATGCTTGGA............. 27 1 4 0.50 2 1 1 0 0 0 0 0 0
.............................................................................................................................TACACTCAATGCTTGGATTCAATTATA... 27 2 2 0.50 1 1 0 0 0 0 0 0 0
...................TCGTAAGGCGCAAATATTTTGTAGGC.............................................................................................................. 26 0 8 0.50 4 0 0 3 0 0 0 1 0
....TGTCGGCTGCTACCTTCGTAAGGCGCAA........................................................................................................................... 28 0 8 0.50 4 0 0 4 0 0 0 0 0
...............................................................................TTACCGTCAAATTCTGGAACAGA..................................................... 23 0 10 0.40 4 1 3 0 0 0 0 0 0
.........................................................................................ATTCTGGAACAGACT................................................... 15 0 5 0.40 2 0 0 2 0 0 0 0 0
........GGCTGCTACCTTCGTAAGGCGCAAA.......................................................................................................................... 25 0 8 0.38 3 0 0 3 0 0 0 0 0
......TCGGCTGCTACCTTCGTAAGGCGCAA........................................................................................................................... 26 0 8 0.38 3 0 1 2 0 0 0 0 0
.......CGGCTGCTACCTTCGTAAGGCGCAAA.......................................................................................................................... 26 0 8 0.38 3 0 1 2 0 0 0 0 0
..............TACCTTCGTAAGGCGCAAATATTTTGTA................................................................................................................. 28 0 8 0.38 3 0 3 0 0 0 0 0 0
...............ACCTTCGTAAGGCGCAAATATTTTGTA................................................................................................................. 27 0 8 0.38 3 1 1 1 0 0 0 0 0
................................................................................TACCGTCAAATTCTGGA.......................................................... 17 0 11 0.36 4 0 0 4 0 0 0 0 0
....................................................................................GTCAAATTCTGGAACAGACT................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0
...................................................................................CGTCGAATTCTGGAACAGACTT.................................................. 22 1 3 0.33 1 0 0 1 0 0 0 0 0
..................................................................................................................AAGGGGCTCATTACACTCAATGTT................. 24 0 3 0.33 1 0 0 1 0 0 0 0 0
....................................TTTGTAGGCTGCAGTCTGTCTCCAGGAAA.......................................................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0
..............................................................................TTTTCCGTCGAATTCTGGAACAGAATT.................................................. 27 3 3 0.33 1 0 1 0 0 0 0 0 0
..................................................................................................................AAGGGGCTCATTACACTCAATGTTTGGAA............ 29 1 3 0.33 1 0 1 0 0 0 0 0 0
....TGTCGGCTGCTACCTTCGTAAGGCGC............................................................................................................................. 26 0 9 0.33 3 1 1 0 0 0 0 1 0
.....................................TTGTAGGCTGCAGTCTGTCTCCAG.............................................................................................. 24 0 3 0.33 1 0 0 1 0 0 0 0 0
......................................TGTAGGCTGCAGTCTGTCTCCAGGAAAC......................................................................................... 28 0 3 0.33 1 0 0 0 0 1 0 0 0
...................................................................................CGTCGAATTCTGGAACAGACTTACC............................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................TTTCCGTCGAATTCTGGAACAGACGT.................................................. 26 3 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................TGTTTTCCGTCGAATTCTGGAACAGACT................................................... 28 3 6 0.33 2 0 1 0 0 0 0 1 0
.......................................................................................AAATTCTGGAACAGACTTGACCATA........................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................CAGTTTACCGTCAAATTCTGGAACAGACT................................................... 29 0 3 0.33 1 0 0 0 0 0 1 0 0
........................AGGCGCAAATATTTTGTAGGCTGC........................................................................................................... 24 0 6 0.33 2 0 0 2 0 0 0 0 0
.............................................TGCAGTCTGTCTCCAGGAAACGTAAAA................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0 0
...................................................................................................................GGGGGCTCATTACACTCAATGTTTGGA............. 27 1 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................TACGTCAAATTCTGGAACAGACT................................................... 23 2 3 0.33 1 0 0 0 1 0 0 0 0
...................................................................................................................AGGGGCTCATTACAC......................... 15 0 3 0.33 1 0 0 1 0 0 0 0 0
............................................................................................................................TTACACTCAATGTTTGGATTCAAT....... 24 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................................................................................................AGGGGCTCATTACAATCAATGTTTGGA............. 27 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................TACCGTCAAATTCTGGAACAGACTTG................................................. 26 0 3 0.33 1 0 0 0 1 0 0 0 0
.....................................TTGTAGGCTGCAGTCTGTCTCCAGGAA........................................................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0
...................................................................TAAATTTCCAGTTTACCGTCAA.................................................................. 22 0 3 0.33 1 0 1 0 0 0 0 0 0
.............................................TGCAGTCTGTCTCCAGGAAACGTAAATT.................................................................................. 28 0 3 0.33 1 0 0 0 1 0 0 0 0
................................................AGTCTGTCTCCAGGAAACGTAAATTT................................................................................. 26 0 3 0.33 1 0 0 1 0 0 0 0 0
..................................................TCTGTCTCCAGGAAACGTAAATTT................................................................................. 24 0 3 0.33 1 0 0 0 1 0 0 0 0
.............................................TGCAGTCTGTCTCCAGGAAACGTAA..................................................................................... 25 0 3 0.33 1 0 0 1 0 0 0 0 0
................................................................................TTCCGTCGAATTCTGGAACAGACTG.................................................. 25 3 3 0.33 1 1 0 0 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTAAG................................................................................................................................. 25 0 9 0.33 3 3 0 0 0 0 0 0 0
.......................................GTAGGCTGCAGTCTGTCTCCAGGA............................................................................................ 24 0 3 0.33 1 0 0 0 1 0 0 0 0
..................................................................................CCGTCGAATTCTGGAACAGACTTTACC.............................................. 27 2 3 0.33 1 0 0 0 0 0 0 0 0
ATAATGTCGGCTGCTACCTTCGTAAGG................................................................................................................................ 27 0 9 0.33 3 2 1 0 0 0 0 0 0
...................................................................................................................ATGGGCTCATTACACTCAATGTTTGGA............. 27 1 3 0.33 1 0 1 0 0 0 0 0 0
.................................................................................TCCGTCGAATTCTGGAACAGACT................................................... 23 2 3 0.33 1 0 0 0 0 0 0 0 0
.............................................TGCAGTCTGTCTCCAGGAAACGTA...................................................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0
.................................................GTCTGTCTCCAGGAAACGTAAATTT................................................................................. 25 0 3 0.33 1 0 0 1 0 0 0 0 0
................................................................................TTCCGTCGAATTCTCGAACAGACTT.................................................. 25 3 3 0.33 1 0 1 0 0 0 0 0 0
.....................................TTGTAGGCTGCAGTCTGTCT.................................................................................................. 20 0 3 0.33 1 0 0 1 0 0 0 0 0
................................................................................TTCCGTCAAATTCTGGAACAGACT................................................... 24 1 3 0.33 1 0 0 0 1 0 0 0 0
......................................TGTAGGCTGCAGTCTGTCTCCAGGAA........................................................................................... 26 0 3 0.33 1 0 0 1 0 0 0 0 0
..................................................................................CCGTCGAATTCTGGAACAGACTT.................................................. 23 1 3 0.33 1 0 0 0 0 0 0 1 0
....................................................TGTCTCCAGGAAACGTAAA.................................................................................... 19 0 3 0.33 1 0 0 1 0 0 0 0 0
.................................TATTTTGTAGGCTGCAGTCTGTCTCC................................................................................................ 26 0 3 0.33 1 0 1 0 0 0 0 0 0
...................................................................................................................AGGGGCTCATTACACTCAATGTTTGGT............. 27 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................TTCCGTCGAATTCTGGAACAGACTTTACCATA........................................... 32 3 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................ACCGTCAAATTCTGGAACAGACTT.................................................. 24 0 3 0.33 1 0 0 0 0 0 0 1 0
................................................................................TTCCGTCGAATTCTGGAACAGACTTTA................................................ 27 3 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................ACCGTCAAATTCTGGAACAGACT................................................... 23 0 3 0.33 1 0 0 0 1 0 0 0 0
...................................................................TAAATTTCCAGTTTACCGTCAAA................................................................. 23 0 3 0.33 1 0 1 0 0 0 0 0 0
........................................TAGGCTGCAGTCTGTCTCCAGGAA........................................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0
...............................................................................TTACAGTCAAATTCTGGAACAGACT................................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0
......................................TGTAGGCTGCAGTCTGTCTCCAAAA............................................................................................ 25 2 3 0.33 1 0 0 1 0 0 0 0 0
.......................................................................TTTCCAGTTTACCGTCAAAA................................................................ 20 1 3 0.33 1 0 1 0 0 0 0 0 0
..............................................................................TTTACCGTCAAATTCTGGAATAGACT................................................... 26 1 3 0.33 1 0 0 0 1 0 0 0 0
..................................................TCTGTCTCCAGGAAACGTAAATTTCC............................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0 0
..............................................................................TTTACCGTCAAATTCTGGAACAGACTT.................................................. 27 0 3 0.33 1 0 0 0 0 1 0 0 0
...................................................CTGTCTCCAGGAAACGTAAA.................................................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0
..........................................................................................TTCTGGAACAGACTTGACC.............................................. 19 0 4 0.25 1 0 0 1 0 0 0 0 0
.................CTTCGTAAGGCGCAAATATTTTGTA................................................................................................................. 25 0 8 0.25 2 1 1 0 0 0 0 0 0
.....................................................................................TCAAATTCTGGAACAGACTTTA................................................ 22 1 4 0.25 1 0 0 1 0 0 0 0 0
...ATGTCGGCTGCTACCTTCGTAAGGCGCAA........................................................................................................................... 29 0 8 0.25 2 2 0 0 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTAAGGCGCAA........................................................................................................................... 31 0 8 0.25 2 2 0 0 0 0 0 0 0
.........................................................................................ATTCTGGAACAGACTTGAGCAT............................................ 22 1 4 0.25 1 0 0 0 1 0 0 0 0
.......CGGCTGCTACCTTCGTAAGGCGCAA........................................................................................................................... 25 0 8 0.25 2 0 0 2 0 0 0 0 0
...................................................................................CGTCGAATTCTGGAACAGACTTTACCATA........................................... 29 2 4 0.25 1 1 0 0 0 0 0 0 0
.........................................................................................ATTCTGGAACAGACTTGGCCATAT.......................................... 24 1 4 0.25 1 0 0 1 0 0 0 0 0
..............................................................................TTTTCCGTCGAATTCTGGAACAGAC.................................................... 25 2 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................AGTTTACCGTCAAATTCTGGAACAGACC................................................... 28 1 4 0.25 1 0 0 0 0 1 0 0 0
........GGCTGCTACCTTCGTAAGGCGCAA........................................................................................................................... 24 0 8 0.25 2 0 0 2 0 0 0 0 0
..........................................................................................TTCTGGAACAGACTTGAC............................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................TTACCGTCAAATTCTGGAACAGAC.................................................... 24 0 4 0.25 1 0 0 0 1 0 0 0 0
....TGTCGGCTGCTACCTTCGTAAGG................................................................................................................................ 23 0 9 0.22 2 1 1 0 0 0 0 0 0
ATAATGTCGGCTGCTACCTTCGTAAG................................................................................................................................. 26 0 9 0.22 2 0 0 2 0 0 0 0 0
......TCGGCTGCTACCTTCGTAAGGCGCA............................................................................................................................ 25 0 9 0.22 2 0 1 1 0 0 0 0 0
...........TGCTACCTTCGTAAGGCGC............................................................................................................................. 19 0 9 0.22 2 0 0 2 0 0 0 0 0
...........TGCTACCTTCGTAAG................................................................................................................................. 15 0 9 0.22 2 0 0 2 0 0 0 0 0
......TCGGCTGCTACCTTCGTAAGGCGC............................................................................................................................. 24 0 9 0.22 2 1 1 0 0 0 0 0 0
..AATGTCGGCTGCTACCTTCGTAAGGCGC............................................................................................................................. 28 0 9 0.22 2 2 0 0 0 0 0 0 0
....TGTCGGCTGCTACCTTCGTAAGGC............................................................................................................................... 24 0 9 0.22 2 0 1 0 0 0 0 1 0
.............................................................................GTTTTCCGTCGAATTCTGGAA......................................................... 21 2 5 0.20 1 0 0 1 0 0 0 0 0
................................................................................TACCGTCAAATTCTGGAACATTC.................................................... 23 2 5 0.20 1 0 0 0 0 1 0 0 0
.............................................................................................................................TACACTCAATGTTTGGATTCAAATT..... 25 2 5 0.20 1 1 0 0 0 0 0 0 0
........................................................................................AATTCTGGAACAGAC.................................................... 15 0 5 0.20 1 0 0 1 0 0 0 0 0
.............................................................................GTTTACCGTCAAATTCTGGA.......................................................... 20 0 5 0.20 1 0 0 1 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTA................................................................................................................................... 23 0 10 0.20 2 1 1 0 0 0 0 0 0
.............................................................................GTTTACCGTCAAATTC.............................................................. 16 0 5 0.20 1 0 0 1 0 0 0 0 0
..................................................................................................................................TCAATGTTTGGATTCAA........ 17 0 5 0.20 1 0 0 1 0 0 0 0 0
.............................................................................................................................TACACTCAATGTTTGGATTCAATTGA.... 26 2 5 0.20 1 1 0 0 0 0 0 0 0
.............................................................................................................................TACACTCAATGTTTGGATTCAATTTAAA.. 28 3 5 0.20 1 0 0 0 1 0 0 0 0
..............................................................................TTTTCCGTCGAATTCTGGAAC........................................................ 21 2 5 0.20 1 0 0 1 0 0 0 0 0
.............................................................................GTTTACCGTCAAATTCTGG........................................................... 19 0 5 0.20 1 0 0 1 0 0 0 0 0
...............................................................................TTTCCGTCGAATTCTGGAAC........................................................ 20 2 11 0.18 2 0 0 2 0 0 0 0 0
..........................................................................................TTCTGGAACAGACTT.................................................. 15 0 6 0.17 1 0 0 1 0 0 0 0 0
..................................................................................................................................TCAATGTTTGGATTCAAA....... 18 1 6 0.17 1 0 0 0 0 0 1 0 0
................................................................................TTCCGTCGAATTCTGGAAC........................................................ 19 2 13 0.15 2 0 0 2 0 0 0 0 0
...........................CGCAAATATTTTGTAGGCTGCAGT........................................................................................................ 24 0 7 0.14 1 1 0 0 0 0 0 0 0
...........................CGCAAATACTTTGTAGGCTGC........................................................................................................... 21 1 7 0.14 1 0 0 1 0 0 0 0 0
...........................CGCAAATATTTTGTAGGCTGC........................................................................................................... 21 0 7 0.14 1 0 0 1 0 0 0 0 0
.......CGGCTGCTGCCTTCGTAAGGCGCAA........................................................................................................................... 25 1 8 0.13 1 0 0 1 0 0 0 0 0
..............TACCTTCGTAAGGCGCAAAT......................................................................................................................... 20 0 8 0.13 1 0 0 1 0 0 0 0 0
..AATGTCGGCTGCTACCTTCGTAAGGCGCAA........................................................................................................................... 30 0 8 0.13 1 1 0 0 0 0 0 0 0
..............TACCTTCGTAAGGCGCAAATATTTTGT.................................................................................................................. 27 0 8 0.13 1 0 0 0 0 0 0 1 0
..................TTCGTAAGGCGCAAATATTTTGTA................................................................................................................. 24 0 8 0.13 1 0 1 0 0 0 0 0 0
.............CTACCTTCGTAAGGCGCAAATATTTTGTA................................................................................................................. 29 0 8 0.13 1 1 0 0 0 0 0 0 0
................CCTTCGTAAGGCGCAAATATTTTGTA................................................................................................................. 26 0 8 0.13 1 0 1 0 0 0 0 0 0
..............TACCTTCGTAAGGCGCAAATATTT..................................................................................................................... 24 0 8 0.13 1 0 0 1 0 0 0 0 0
..............TACCTTCGTAAGGCGCAAATATTTTG................................................................................................................... 26 0 8 0.13 1 0 0 1 0 0 0 0 0
..............TACCTTCGTAAGGCGCAAATA........................................................................................................................ 21 0 8 0.13 1 0 0 1 0 0 0 0 0
....TGTCGGCTGCTACCTCCGTAAGGCGCAA........................................................................................................................... 28 1 8 0.13 1 0 0 1 0 0 0 0 0
..AATGTCGGCTGCTACCTTCGTAAGGC............................................................................................................................... 26 0 9 0.11 1 0 1 0 0 0 0 0 0
.......CGGCTGCTACCTTCGTAAGGC............................................................................................................................... 21 0 9 0.11 1 0 0 1 0 0 0 0 0
...ATGTCGGCTGCTACCTTCGTAAGG................................................................................................................................ 24 0 9 0.11 1 1 0 0 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTAAGGCGCA............................................................................................................................ 30 0 9 0.11 1 1 0 0 0 0 0 0 0
..............TACCTTCGTAAGGCGC............................................................................................................................. 16 0 9 0.11 1 0 0 1 0 0 0 0 0
...........TGCTACCTTCGTAAGGCG.............................................................................................................................. 18 0 9 0.11 1 1 0 0 0 0 0 0 0
.TAATGTCGGCTGCTATTTTCGTAAGGCGC............................................................................................................................. 29 2 9 0.11 1 1 0 0 0 0 0 0 0
...ATGTCGGCTGCTACCTTCGTAAGGCGC............................................................................................................................. 27 0 9 0.11 1 1 0 0 0 0 0 0 0
.TAATGTCGGCTGCTATTTTCGTAAGGC............................................................................................................................... 27 2 9 0.11 1 1 0 0 0 0 0 0 0
.......CGGCTGCTACCTTCGTAAGGCGC............................................................................................................................. 23 0 9 0.11 1 0 1 0 0 0 0 0 0
...............................................................................TTACCGTCAAATTCTGGAACAGAGT................................................... 25 1 9 0.11 1 0 0 0 0 0 0 1 0
.TAATGTCGGCTGCTACCTTCGTAAGGCACA............................................................................................................................ 30 1 9 0.11 1 1 0 0 0 0 0 0 0
.........GCTGCTACCTTCGTAA.................................................................................................................................. 16 0 9 0.11 1 0 1 0 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTGAGG................................................................................................................................ 26 1 9 0.11 1 1 0 0 0 0 0 0 0
........GGCTGCTACCTTCGTAAGGCGCA............................................................................................................................ 23 0 9 0.11 1 0 1 0 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTAAGGCA.............................................................................................................................. 28 1 9 0.11 1 1 0 0 0 0 0 0 0
...........TGCTACCTTCGTAAGGCGCA............................................................................................................................ 20 0 9 0.11 1 0 0 1 0 0 0 0 0
............GCTACCTTCGTAAGG................................................................................................................................ 15 0 9 0.11 1 0 1 0 0 0 0 0 0
.AAATGTCGGCTGCTACCTTCGTAAGG................................................................................................................................ 26 1 9 0.11 1 1 0 0 0 0 0 0 0
..............TACCTTCGTAAGGCG.............................................................................................................................. 15 0 9 0.11 1 0 0 1 0 0 0 0 0
.TAATGTCGGATGCTACTTTCGTAAGG................................................................................................................................ 26 2 9 0.11 1 0 1 0 0 0 0 0 0
................................................................................TACCGTCAAATTCTGGAACAGA..................................................... 22 0 10 0.10 1 0 0 1 0 0 0 0 0
.........................................................................TCCAGTTTATCGTGAAA................................................................. 17 2 20 0.10 2 0 2 0 0 0 0 0 0
..................................................................................CCGTCGAATTCTGGAACAGA..................................................... 20 1 10 0.10 1 0 0 1 0 0 0 0 0
.TAATGTCGGCTGCTACCTTCGTATGGC............................................................................................................................... 27 1 10 0.10 1 1 0 0 0 0 0 0 0
................................................................................TTCCGTCGAATTCTGGAACAGA..................................................... 22 2 10 0.10 1 0 0 1 0 0 0 0 0
...............................................................................TTACCGACAAATTCTGGAACAGA..................................................... 23 1 10 0.10 1 0 0 0 0 0 1 0 0
................................................................................TTCCGTCGAATTCTGGAACA....................................................... 20 2 11 0.09 1 1 0 0 0 0 0 0 0
............................GCAAATATTTTGTAGGC.............................................................................................................. 17 0 11 0.09 1 0 0 1 0 0 0 0 0
..................................................................................CCGTCAAATTCTGGA.......................................................... 15 0 11 0.09 1 0 1 0 0 0 0 0 0
.............................................................................................................................TACACTCAATGTTTGGAA............ 18 1 11 0.09 1 1 0 0 0 0 0 0 0
...............................................................................................................................CACTCAATGTTTGGA............. 15 0 11 0.09 1 0 1 0 0 0 0 0 0
................................................................................TACCGTCAAATTCTGGAACA....................................................... 20 0 11 0.09 1 0 0 1 0 0 0 0 0
.........GCTGCGACCGTCGTAAG................................................................................................................................. 17 2 12 0.08 1 0 0 1 0 0 0 0 0
.TAATGTCGGCTGCTA........................................................................................................................................... 15 0 12 0.08 1 0 0 1 0 0 0 0 0
................................................................................TACCGTCAAGTTCTGG........................................................... 16 1 12 0.08 1 0 0 1 0 0 0 0 0
.TAATGTCGGCTGCTACCTT....................................................................................................................................... 19 0 12 0.08 1 0 0 1 0 0 0 0 0
...............................................................................TTTCCGTCGAATTCTGGAA......................................................... 19 2 14 0.07 1 0 0 1 0 0 0 0 0
.................................................GTCTGTCTCCGGGAA........................................................................................... 15 1 15 0.07 1 0 0 0 1 0 0 0 0
..................................................................................................................................TCAATGTTTGGATTAA......... 16 1 16 0.06 1 1 0 0 0 0 0 0 0
..........................................................CAGGAAACCTAAATT.................................................................................. 15 1 20 0.05 1 0 0 0 1 0 0 0 0
...................................................................................CGTCGAATTCTGGAA......................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0
..........................................GGCTGTAGTCTGTCC.................................................................................................. 15 2 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................ACGGACATGACCATATAAAA...................................... 20 3 20 0.05 1 0 0 0 0 1 0 0 0
................................................GGTCTGTCTCCAGGA............................................................................................ 15 1 20 0.05 1 0 0 1 0 0 0 0 0

Anti-sense strand reads

AAATAGAATTGAATCCAAACATTGAGTGTAATGAGCCCCTTTATATGGTCAAGTCTGTTCCAGAATTTGACGGTAAACTGGAAATTTACGTTTCCTGGAGACAGACTGCAGCCTACAAAATATTTGCGCCTTACGAAGGTAGCAGCCGACATTAT
************************************..(((((((.((...((((((((((((((....(((.((((((...))))))))).))))))).)))))))....)))))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary		 SRR618934
Ovary		 SRR553485
Ovary		 SRR553488
Ovary		 M053
Female-body		 M025
embryo
 SRR553487
Ovary
........................................................GTTCCAGAATTTGACGGTAAACTGGA......................................................................... 26 0 3 9.67 29 18 0 8 1 1 0 1
...TAGAATTGAATCCAAACATTGAGTG............................................................................................................................... 25 0 1 6.00 6 6 0 0 0 0 0 0
............................................................................................TCCGGGAGACAGACTGC.............................................. 17 1 3 4.33 13 4 0 0 0 0 0 9
......................................................................................TACGTTTCCTGGAGACAGACTGCAGCC.......................................... 27 0 3 3.00 9 4 2 1 1 0 1 0
..ATAGAATTGAATCCAAACATTGAGTG............................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0
............................................................................................TCCGGGAGACAGACTGCGG............................................ 19 2 5 2.60 13 1 0 0 0 0 0 12
............................................................................................TCCGGGAGACAGACTGCG............................................. 18 2 6 2.33 14 0 0 1 2 0 0 11
...............................................................................................TGGAGACAGACTGCAGCCTACAAAATA................................. 27 0 3 2.33 7 7 0 0 0 0 0 0
...................................................................TGACGGTAAACTGGAAATTTACGTT............................................................... 25 0 3 2.00 6 0 6 0 0 0 0 0
.............................................................................................CCGGGAGACAGACTGC.............................................. 16 1 3 2.00 6 1 1 0 0 0 0 4
..........................................................................................TATCCGGGAGACAGACTGC.............................................. 19 2 3 2.00 6 0 0 0 0 0 0 6
...............................................................................................TGGAGACAGACTGCAGCCTACAAAA................................... 25 0 3 2.00 6 2 4 0 0 0 0 0
........................................................GTTCCAGAATTTGACGGTAAACT............................................................................ 23 0 3 1.67 5 0 3 1 1 0 0 0
......................................................................................TACGTTTCCTGGAGACAGACTGCAGC........................................... 26 0 3 1.67 5 2 0 0 2 1 0 0
........................................................GTTCCAGAATTTGACGGTAAACTG........................................................................... 24 0 3 1.33 4 0 4 0 0 0 0 0
............................................................................................TCCGGGAGACAGACTGCGGG........................................... 20 3 6 1.33 8 1 0 0 2 0 0 5
..........................................................................................TATCCGGGAGACAGACTGCGG............................................ 21 3 6 1.17 7 0 0 0 3 0 0 4
..............................................................................................CGGGAGACAGACTGCGG............................................ 17 2 11 1.09 12 0 1 0 0 0 0 11
...TAGAATTGAATCCAAACATTGAGTGT.............................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
........................................................GTTCCAGAATTTGACGGTAAACTGG.......................................................................... 25 0 3 1.00 3 1 1 0 0 1 0 0
..............................................................................................CGGGAGACAGACTGC.............................................. 15 1 4 1.00 4 0 0 0 2 0 0 2
...TAGAATTGAATCCAAACATTGAGTGTA............................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
.AATAGAATTGAATCCAAACATTGAGTG............................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................TATCCGGGAGACAGACTGCG............................................. 20 3 9 0.89 8 0 0 0 1 0 0 7
.............................................................................................CCGGGAGACAGACTGCGG............................................ 18 2 7 0.86 6 1 0 1 1 0 0 3
..............................................................................................CGGGAGACAGACTGCG............................................. 16 2 20 0.80 16 0 1 0 1 0 0 14
.................................................................................................................TACAAAATATTTGCGCCTTACGAAGGTA.............. 28 0 8 0.75 6 4 0 0 2 0 0 0
............................................................................................TCCTGGAGACAGACTGCAGCCTACAAAA................................... 28 0 3 0.67 2 2 0 0 0 0 0 0
.............................................................................................CCGGGAGACAGACTGCG............................................. 17 2 12 0.67 8 0 1 1 0 0 0 6
....................................................................................TTTACGTTTCCTGGAGACAGACTGC.............................................. 25 0 3 0.67 2 1 0 0 1 0 0 0
...................................................................................ATTTACGTTTCCTGGAGACAGACTGC.............................................. 26 0 3 0.67 2 1 0 0 1 0 0 0
....................................................................................TTTACGTTTCCTGGAGACAGACTGCAGC........................................... 28 0 3 0.67 2 1 0 1 0 0 0 0
...........................................................................................TTCCTGGAGACAGACTGCAGCCTACAAAA................................... 29 0 3 0.67 2 1 0 0 0 1 0 0
...........................................................................................ATCCGGGAGACAGACTGC.............................................. 18 2 10 0.40 4 1 0 0 1 0 0 2
...........................................................................................TTCCTGGAGACAGACTGCAGCCTACAA..................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................TCTGTTCCAGAATTTGACGGTAAACTGGA......................................................................... 29 0 3 0.33 1 1 0 0 0 0 0 0
................................................TAAAGTCTGTTCCAGAATTCGACGGAA................................................................................ 27 3 3 0.33 1 0 0 1 0 0 0 0
..................................................................................AATTTACGTTTCCTGGAGACAGACTGC.............................................. 27 0 3 0.33 1 0 1 0 0 0 0 0
..........................................................................................TTTCCTGGAGACAGACTGCAGCCTACA...................................... 27 0 3 0.33 1 0 0 0 0 1 0 0
..................................................................TTGACGGTAAACTGGAAATTTACGTT............................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0
........................................................GTTCCAGAGTTTGACGGTAAACTGGA......................................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0
.................................................CAAGTCTGTTCCAGAATTTGACGGT................................................................................. 25 0 3 0.33 1 0 0 0 1 0 0 0
......................................................................................TACGTTTCCTGGAGACAGACTGCAAC........................................... 26 1 3 0.33 1 0 1 0 0 0 0 0
.....................................................TCTGTTCCAGAATTTGACTGTAAACTGGA......................................................................... 29 1 3 0.33 1 1 0 0 0 0 0 0
........................................................GTTCCATAATTTGACGGTAAACTGGA......................................................................... 26 1 3 0.33 1 0 0 0 0 0 0 1
.............................................................AGAATTTGACGGTAAACTGGA......................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0
........................................................................................CGTTTCCTGGAGACAGACTGCAGCC.......................................... 25 0 3 0.33 1 0 1 0 0 0 0 0
......................................................................................TACGTTTCCTGGAGACAGACTGC.............................................. 23 0 3 0.33 1 0 1 0 0 0 0 0
...............................................................AATTTGACGGTAAACTGGA......................................................................... 19 0 3 0.33 1 0 1 0 0 0 0 0
........................................................GTTCCAGAATATGACGGTAAACTG........................................................................... 24 1 3 0.33 1 0 1 0 0 0 0 0
..................................................................................AATTTACGTTTCCTGGAGACAGAC................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0
........................................................GTTCCACAATTTGACGGTAAACTGGA......................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................TATCCGGGAGACAGACT................................................ 17 2 12 0.33 4 1 0 0 1 0 0 2
......................................................................................TACGTTTCCTGGAGACAGACTGCA............................................. 24 0 3 0.33 1 0 0 0 0 0 1 0
........................................................GTTCCAGAATTTGACGGTAAACTAGAGGT...................................................................... 29 3 3 0.33 1 0 1 0 0 0 0 0
........................................................GTTCCAGAATTTGACGGTAAACTGA.......................................................................... 25 1 3 0.33 1 0 0 0 0 1 0 0
........................................................GTTCCGGAATTTGACGGTAAACTGGA......................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0
.................................................CAAGTCTGTTCCAGAATTTGACGGTA................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0
..........................................ATATGGTCAAGTCTGTTCCAGAATT........................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................TTTCCTGGAGACAGACTGCAGCCTACAAAA................................... 30 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................TCCTGGAGACAGACTGCAGCCTACA...................................... 25 0 3 0.33 1 0 0 0 0 1 0 0
.....................................................TCTGTTCCAGAATTTGACGGTAAAC............................................................................. 25 0 4 0.25 1 0 0 0 1 0 0 0
.................................................................................................................TACAAAATATTTGCGCCTTACGAAGG................ 26 0 8 0.25 2 1 0 1 0 0 0 0
...................................................AGTCTGTTCCAGAATTCGAC.................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0
........................................................................................................................TATTTGCGCCTTACGAAGGTAGCAGC......... 26 0 8 0.25 2 0 1 0 0 1 0 0
.............................................................................................CCTGGAGACAGACTGCGG............................................ 18 1 4 0.25 1 0 0 0 1 0 0 0
..........................................................................................................................TTTGCGCCTTACGAAGGTAGCAGCCGA...... 27 0 8 0.25 2 1 1 0 0 0 0 0
........................................................GTTCCAGAATTCGACGGAAAAC............................................................................. 22 2 5 0.20 1 0 0 0 0 0 0 1
.......ATTGAATCCAAACATTGAGTG............................................................................................................................... 21 0 5 0.20 1 0 1 0 0 0 0 0
........................................................GTTCCAGAATTTGACGG.................................................................................. 17 0 11 0.18 2 0 1 1 0 0 0 0
..........................................................................................TATCCGGGAGACAGACGGC.............................................. 19 3 11 0.18 2 0 0 0 0 0 0 2
........................................................GTTCCAGAATTTGACGGT................................................................................. 18 0 11 0.18 2 0 2 0 0 0 0 0
........................................................GTTCCAGAATTTGACGGTAA............................................................................... 20 0 11 0.18 2 1 0 1 0 0 0 0
................................................................ATTTGACGGAAAACAGGGAATT..................................................................... 22 3 6 0.17 1 0 1 0 0 0 0 0
.............................................................................................CCGGGAGACAGACTG............................................... 15 1 6 0.17 1 0 0 0 0 0 0 1
.............................................TGGTCGAGTCTGTTCAAGAAA......................................................................................... 21 3 7 0.14 1 0 0 0 1 0 0 0
.............................................................................................CCGGGAGACAGACTGCGGG........................................... 19 3 14 0.14 2 0 0 0 0 0 0 2
.................................................................................................................TACAAACTATTTGCGCCTTACGAAGGT............... 27 1 8 0.13 1 0 0 0 0 1 0 0
..........................................................................................TATCCGGGAGACAGACTG............................................... 18 2 8 0.13 1 0 0 0 1 0 0 0
...............................................................................................................CCTACAAAATATTTGCGCCTTACGAA.................. 26 0 8 0.13 1 0 0 1 0 0 0 0
..............................................................................................................GCCTACAAAATATTTGCGCCTTACGA................... 26 0 8 0.13 1 1 0 0 0 0 0 0
........................................................GTTCCAGAATTCGACGGA................................................................................. 18 2 16 0.13 2 0 2 0 0 0 0 0
.................................................................................................................TACAAAATATTTGCGCCTTACGAAGGT............... 27 0 8 0.13 1 0 1 0 0 0 0 0
............................................................................................................................TGCGCCTTACGAAGGTAGCAGCCGACAT... 28 0 9 0.11 1 0 0 0 0 1 0 0
.................................................................................................................................CTTACGAAGGTAGCAGCCGACATTAT 26 0 9 0.11 1 0 0 0 0 0 0 1
..............................................................................................................................CGCCTTACGAAGGTA.............. 15 0 9 0.11 1 0 1 0 0 0 0 0
..............................................................................................................................CGCCTTACGAAGGTAGCAGCCGACAT... 26 0 9 0.11 1 0 1 0 0 0 0 0
..............................................................................................CGGGAGACAGACTGCGGG........................................... 18 3 20 0.10 2 1 0 0 0 0 0 1
.....................................................TCTGTTCCAGAATTTGACGG.................................................................................. 20 0 10 0.10 1 1 0 0 0 0 0 0
............................................................................................TCCGGGAGACAGACGGC.............................................. 17 2 11 0.09 1 0 0 0 0 0 0 1
.......................................................TGTTCCAGAATTTGACGGT................................................................................. 19 0 11 0.09 1 0 1 0 0 0 0 0
........................................................GTTCCAGAATTTGACGGTA................................................................................ 19 0 11 0.09 1 0 1 0 0 0 0 0
..................................................CAGTCTGTTCCAGCGTTTGA..................................................................................... 20 3 13 0.08 1 0 0 0 1 0 0 0
................................................................ATTTGACGGGAAACT............................................................................ 15 1 16 0.06 1 0 1 0 0 0 0 0
............................................................................................TCCGGGAGTCAGACTGCGG............................................ 19 3 16 0.06 1 0 0 0 0 0 1 0
........................................................................................CGTATCCGGGAGTCAGAC................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0
.......................................GTTATATGGTCAAGTG.................................................................................................... 16 2 20 0.05 1 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chr2h_Mrandom_003:92888-93042 - dsi_79 ATAATGTCGGCTGCTACCTTCGTAAGGCGCAAATATTTTGTAGGCTGC------AGTCTGTCTCCAGGAAACGTAAATTTCCAGTTTACCGTCAAATTCTGGAACAGACTTGACCATATAAAGGGGCTCATTACACTCAA-------TGTTTGGATTCAAT-TCTATTT
droSec2 scaffold_65:147754-147908 + ATAATGTCGGCTGCTACCTTCGTAAGGCGCAAGTATTTTGTAGGCTGC------AGTCTGTCTCCAGGAAACGTAAATTTCCTGTTTACCGTCAAATTCTGGAACAGACTGGACCATATCAAGGGGCTCATTACACTCAA-------TGTTTGGATTCAAT-TCTATTT
dm3 chr3LHet:1261636-1261796 - ATAGTGCCGGTTGCTACCCTCGTACGACTGGAAAATTTTGTATGCCGCAGTAGCGGCTTGTCTCCAAGAGACGTAATATTCTTGCTTCCCATTGAATTCTGGGACAGATTTGACCATATAAAGAGGTTCATTGCATTCAA-------TCTCTGGTTTAAAT-TCAATTT
droEre2 scaffold_4759:29921-30081 + GTAATGTCGGCTGCCGCCTTCGTAAGGTTCAAATAATTTGTATGTCGCAGTTGCGGCCTGTCTCCAGGAAACGCAATTTTCTTGTTTCCCGTCAAATTCCGGGACGGATTTTACCATGTCGAGAGGTTCGTTGCACTCGC-------TTCCTGGTCTAATT-TCAATTT
droYak3 v2_chr2h_random_004:181015-181175 + ATAATGTCGCCTGCTACATTCGTAAGGAGCAAATATTTTGTAGGCTGCAGTGGCGGCCTGTCTCCAGGAAACGTTATTTTCCTGTTTACCGTCAAATTCTAGAACAGACTTGAGCATATCAAGGGGCTCATTACACTCAA-------TTTTTCGATTCAAT-TCGATTT
droEug1 scf7180000409227:7492-7651 - GTAGTCTCGACTACTACCGTCGTATGGCTCAAATACTTTATAGGCTGCGGTGGC-GTCTGCCTCCAGGATATATAATTTTCCTGGCTACCATCAAATTCTGGAATCGACTTGACCATATCAAGGGGTTCGTTGCACTGTA-------TCTCAGGTTTCAAT-TCGATTT
droBia1 scf7180000297084:4733-4893 + GTAAAAGCGACTGCTCCCTTCATAGGGCTCAAATACCCTGTAGGCTGCGATATCAGCTTGTCTCCAGGAAACATAATTTTCTTGTTTCCCGTCGAATTCTGGGACGGACTTGATAATGTCCAGGGGCTCATTACATTGCT-------TTTCAGGTTCTATT-TGAATCT
droTak1 scf7180000414579:3129-3289 + ATAATGTCTACTACTGCCGTCATAAGGCTCGAATACTTTATAAGCCGCGGTGGCGGCCTGCCTCCAGGAAACGTAATTTTCCTGTTTGCCGTCGAATTCTGGGACTGACTTGACCATGTCGAGGGGTTCATTACACTGTA-------TGTCTGGCTTTAGT-TCTATTT
droEle1 scf7180000488368:5446-5606 + TTAATGTCGGCTGCTGCCTTTGTATGGCTCAAATACCCTATATGCTGCAGTAGCAGCCTGCCTCCAGGAAACATAGTTTTCCTGCTTCCCGTCGAATTCCGGGACAGATTTTACCATGTCCAGGGGCTCGTTACATTCTT-------TTTCCGGTTCTATT-TCTATTT
droRho1 scf7180000764096:2894-3057 - ATAATGTCGGCTGCTGCCTTCATAGCCCTCAAATACTTTGTAGGCTGCGGTGGCAGCTTGTCTCCAGCAAACATAATTTTCCTGTTTACCGTCGAATTCTGGGACTGACTTGACCATGTCAAGAGGTTCGTCACAACGTA----CTCTTTGTGGTTCTAAT-TTAATTT
droFic1 scf7180000452073:13079-13239 + ATAGTGACGGCTACTGCCATCATATGACTCAAATACCTTATAAGCTGTTATCTCAGCCTGCCTCCAGGAAACGTAATTTTCCTGTTTGCCGTCAAATTCTGGGACTGATTTTACCATGTCAAGGGGTTAATTACATATTA-------CTTCTGGTCTCAAT-TCAATTT
droKik1 scf7180000298987:2912-3075 + ATAATGGCGGCTGCTGCCTTCATAGTTTTCGAAAACTTTATATGCTGCACAGGCAGCTTGTCTCCAGGAAATGTAATTTTCCTGCTTCCCATCAAATGTTGGGACCGACTTCACCATGTCGAGTGGTTCGTCGCAAAATA----CCTCTTCTGGCTTAAGC-TCAATTT
droAna3 scaffold_13417:6129266-6129426 + ATAGTGTCGGCTACTGCCATCATAAGGTTCAAAAACCTTATAGGCTGCGGTGGCGGCTTGCCTCCAGGAAACATAATCCTCCTGCTTCCCGTCAAATTCGGGGACTGACTTGACCATGTCAAGGGGTTCATTACACAGTA-------TGTTTGTTTTTAAT-TCAATTT
droBip1 scf7180000391591:17067-17227 + ATAATGTCGGCTACTGCCATCATAAGGTTCAAAAACCTTATAAGCTGCGGTGGTGGCTTGCCTCCAAGAAACATAATTTTCCTGCTTGCCTTCAAATTCTGGGACTGATTTGACCATGTCAAGGGGTTCATAACACTGCA-------TCTCTGTTTTTAAT-TCAATTT
dp5 Unknown_group_699:29550-29710 + GTAATGTCTAGCGCTGCCCTCATAGGGCTCGAAAGTTTTATAGGCCGCCAGCGCTGCCTGGCGCCAAGCCACATAATTTTCCTGTTTGCCGTCGAACTCGGGGACGGACTTAACCATGTCCAATGGCTGATCACACTGGA-------CATCGGGACTTATT-TCTATCT
droPer2 scaffold_164:41606-41766 + GTAATGTCTAGCGCTGCCCTCATAGGGCTCGAAAGTTTTATAGGCCGCCAGCGCTGCCTGGCGCCAAGCCACATAATTTTCCTGTTTGCCGTCGAACTCGGGGACGGACTTAACCATGTCCAATGGCTGATCACACTGGA-------CATCGGGATTTATT-TCTATCT
droWil2 scf2_1100000004958:2020321-2020488 + GTAATGCCGGGCAGAACCGTCGTAGGGCTCAAATATTTCATAAGCTATTGTCGCGGCCTGCCGCCAAGCGACATATTCTTCTTGGCATCCGTTAAACTCGGGCAGAGATTTAACAATATCAAGCAGCTCATCACACTGCTCACACTTT-TCCGGGTCTATTATTATTTT
droVir3 scaffold_12970:704752-704910 + ATAGCCTCGA--GCTGCCATCATATGGCTCAATTACTTTGTAGGCGGCGCAGGCGGCCTGTCTCCATGAGACATAGTTTCCTTGTTTTCCGTCAAATTCTGGAATAGACTTTATGATATCTTAGGCTTCTTTGCATTAAA-------TCCCTGGCACTATT-TGTATTT
droMoj3 scaffold_4434:5237-5397 - ATAGTGCCTCGAGCTGCCATCGTAAGGTTCAAAAACCTTATAAGCTGCGCAGGCAGTTTGTCTCCAAGAAACATAATTTTCTTGTTTGCCGTCAAACTCTGGAATTGACTTAACGATATCTAGGGGCTCGTCGCATTTAT-------TACCCGCGATAATT-TTTATCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
ATAATGTCGGCTGCTACCTTCGTAAGGCGCAAATATTTTGTAGGCTGC------AGTCTGTCTCCAGGAAACGTAAATTTCCAGTTTACCGTCAAATTCTGGAACAGACTTGACCATATAAAGGGGCTCATTACACTCAA-------TGTTTGGATTCAAT-TCTATTTSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.........................................................................................................................AGGGGCTCATTACACTCAA-------TGTTTGGA..............27311.333400000001016260
...................................................................................................................................TACACTCAA-------TGTTTGGATTCAAT-T......24511.2056000000121151351
......................................................................................TACCGTCAAATTCTGGAACAGACT...........................................................2439.67290001900002062
..........................................................................................................................GGGGCTCATTACACTCAA-------TGTTTGGA..............2638.672600000001012130
.TAATGTCGGCTGCTACCTTCGTAAGGC.............................................................................................................................................2796.676000000002725008
...............................................................................................ATTCTGGAACAGACTTGACCATAT..................................................2446.5026000000082934
........................................................................................................................AAGGGGCTCATTACACTCAA-------TGTTTGGA..............2834.3313000000083200
.TAATGTCGGCTGCTACCTTCGTAAGG..............................................................................................................................................2693.67330000000219003
...............................................................................................ATTCTGGAACAGACTTGACCATA...................................................2343.5014000040071101
.....................................................................................TTACCGTCAAATTCTGGAACAGACT...........................................................2533.009000500002110
.TAATGTCGGCTGCTACCTTCGTAAGGCGC...........................................................................................................................................2992.782500000001411000
.............................................TGC------AGTCTGTCTCCAGGAAACGTAAA............................................................................................2632.006000000002112
...............................................................................................ATTCTGGAACAGACTTGACCATATAA................................................2612.002000000200000
...................................................................................................................................TACACTCAA-------TGTTTGGATTCAAT-.......2351.407000000040201
........................................TAGGCTGC------AGTCTGTCTCCAGGAAACG................................................................................................2731.334000000002011
..............................................................................................................................CTCATTACACTCAA-------TGTTTG................2031.003000030000000
..........................................................................................................................GGGGCTCATTACACTCAA-------TGTTTGGAT.............2731.003000000020010
......................................................................................TACCGTCAAATTCTGGAACAGACTT..........................................................2531.003000200001000
.....................................................................................TTACCGTCAAATTCTGGAACAG..............................................................22101.00100000100000000
.................................TATTTTGTAGGCTGC------AGTCTGTCTC.........................................................................................................2531.003000000000012
...............................................................................................ATTCTGGAACAGACTTGACCATATA.................................................2511.001000000100000
...................................................................................................................................TACACTCAA-------TGTTTGGATTCAAT-TCTATT.2911.001000000000010
....................................................................................TTTACCGTCAAATTCTGGAACAGACT...........................................................2631.003000200000010
......................................................................................................................................ACTCAA-------TGTTTGGATTCA..........1851.005000050000000
...........................................................................AATTTCCAGTTTACCGTCAAA.........................................................................2131.003000000002001
......................................TGTAGGCTGC------AGTCTGTCTCCAGGAAA..................................................................................................2731.003000000000012
..................TTCGTAAGGCGCAAATATTTTGTAGGC............................................................................................................................2781.008000000133001
...............................................................................................ATTCTGGAACAGACTTGACCATATAAA...............................................2711.001000000100000
...............................................................................................ATTCTGGAACAGACTT..........................................................1650.804000000000004
.........................................................................................................................AGGGGCTCATTACACTCAA-------TGTTTGGAT.............2830.672000000010010
........................................................................................................................AAGGGGCTCATTACACTCAA-------TGTTTGG...............2730.672000000002000
.TAATGTCGGCTGCTACCTTCGTAAGGCG............................................................................................................................................2890.676000000023001
...............................AATATTTTGTAGGCTGC------AGTCTGTC...........................................................................................................2530.672000000001001
.........................................................................................................................AGGGGCTCATTACACTCAA-------TGTTTGG...............2630.672000000020000
..................................................................................................................................TTACACTCAA-------TGTTTGGATTCAAT-T......2530.672000000001010
.TAATGTCGGCTGCTACCT......................................................................................................................................................18120.678000000017000
...........TGCTACCTTCGTAAGGCGCAAA........................................................................................................................................2280.635000000000005
ATAATGTCGGCTGCTACCTTCGTAAGGC.............................................................................................................................................2890.565000000032000
...............................................................................................ATTCTGGAACAGACTTGACCAT....................................................2240.502000000010001
......TCGGCTGCTACCTTCGTAAGGCGCAAA........................................................................................................................................2780.504000000012100
...................TCGTAAGGCGCAAATATTTTGTAGGC............................................................................................................................2680.504000000100003
....TGTCGGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................2880.504000000000004
.....................................................................................TTACCGTCAAATTCTGGAACAGA.............................................................23100.404000000013000
...............................................................................................ATTCTGGAACAGACT...........................................................1550.402000000000002
........GGCTGCTACCTTCGTAAGGCGCAAA........................................................................................................................................2580.383000000000003
......TCGGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................2680.383000000001002
.......CGGCTGCTACCTTCGTAAGGCGCAAA........................................................................................................................................2680.383000000001002
..............TACCTTCGTAAGGCGCAAATATTTTGTA...............................................................................................................................2880.383000000003000
...............ACCTTCGTAAGGCGCAAATATTTTGTA...............................................................................................................................2780.383000000011001
......................................................................................TACCGTCAAATTCTGGA..................................................................17110.364000000000004
..........................................................................................GTCAAATTCTGGAACAGACT...........................................................2030.331000000000001
........................................................................................................................AAGGGGCTCATTACACTCAA-------TGTT..................2430.331000000000001
....................................TTTGTAGGCTGC------AGTCTGTCTCCAGGAAA..................................................................................................2930.331000000000001
....TGTCGGCTGCTACCTTCGTAAGGCGC...........................................................................................................................................2690.333000000111000
.....................................TTGTAGGCTGC------AGTCTGTCTCCAG......................................................................................................2430.331000000000001
......................................TGTAGGCTGC------AGTCTGTCTCCAGGAAAC.................................................................................................2830.331000100000000
.............................................................................................AAATTCTGGAACAGACTTGACCATA...................................................2530.331000000010000
.................................................................................CAGTTTACCGTCAAATTCTGGAACAGACT...........................................................2930.331000000000100
........................AGGCGCAAATATTTTGTAGGCTGC------...................................................................................................................2460.332000000000002
.........................................................................................................................AGGGGCTCATTACAC.................................1530.331000000000001
..................................................................................................................................TTACACTCAA-------TGTTTGGATTCAAT-.......2430.331000000001000
......................................................................................TACCGTCAAATTCTGGAACAGACTTG.........................................................2630.331000000000010
.....................................TTGTAGGCTGC------AGTCTGTCTCCAGGAA...................................................................................................2730.331000000000001
.........................................................................TAAATTTCCAGTTTACCGTCAA..........................................................................2230.331000000001000
.............................................TGC------AGTCTGTCTCCAGGAAACGTAAATT..........................................................................................2830.331000000000010
......................................................AGTCTGTCTCCAGGAAACGTAAATTT.........................................................................................2630.331000000000001
........................................................TCTGTCTCCAGGAAACGTAAATTT.........................................................................................2430.331000000000010
.............................................TGC------AGTCTGTCTCCAGGAAACGTAA.............................................................................................2530.331000000000001
.TAATGTCGGCTGCTACCTTCGTAAG...............................................................................................................................................2590.333000000030000
.......................................GTAGGCTGC------AGTCTGTCTCCAGGA....................................................................................................2430.331000000000010
ATAATGTCGGCTGCTACCTTCGTAAGG..............................................................................................................................................2790.333000000021000
.............................................TGC------AGTCTGTCTCCAGGAAACGTA..............................................................................................2430.331000000000001
.......................................................GTCTGTCTCCAGGAAACGTAAATTT.........................................................................................2530.331000000000001
.....................................TTGTAGGCTGC------AGTCTGTCT..........................................................................................................2030.331000000000001
......................................TGTAGGCTGC------AGTCTGTCTCCAGGAA...................................................................................................2630.331000000000001
..........................................................TGTCTCCAGGAAACGTAAA............................................................................................1930.331000000000001
.................................TATTTTGTAGGCTGC------AGTCTGTCTCC........................................................................................................2630.331000000001000
.......................................................................................ACCGTCAAATTCTGGAACAGACTT..........................................................2430.331000000100000
.......................................................................................ACCGTCAAATTCTGGAACAGACT...........................................................2330.331000000000010
.........................................................................TAAATTTCCAGTTTACCGTCAAA.........................................................................2330.331000000001000
........................................TAGGCTGC------AGTCTGTCTCCAGGAA...................................................................................................2430.331000000001000
........................................................TCTGTCTCCAGGAAACGTAAATTTCC.......................................................................................2630.331000100000000
....................................................................................TTTACCGTCAAATTCTGGAACAGACTT..........................................................2730.331000100000000
.........................................................CTGTCTCCAGGAAACGTAAA............................................................................................2030.331000000000001
................................................................................................TTCTGGAACAGACTTGACC......................................................1940.251000000000001
.................CTTCGTAAGGCGCAAATATTTTGTA...............................................................................................................................2580.252000000011000
...ATGTCGGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................2980.252000000020000
.TAATGTCGGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................3180.252000000020000
.......CGGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................2580.252000000000002
........GGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................2480.252000000000002
................................................................................................TTCTGGAACAGACTTGAC.......................................................1840.251000000001000
.....................................................................................TTACCGTCAAATTCTGGAACAGAC............................................................2440.251000000000010
....TGTCGGCTGCTACCTTCGTAAGG..............................................................................................................................................2390.222000000011000
ATAATGTCGGCTGCTACCTTCGTAAG...............................................................................................................................................2690.222000000000002
......TCGGCTGCTACCTTCGTAAGGCGCA..........................................................................................................................................2590.222000000001001
...........TGCTACCTTCGTAAGGCGC...........................................................................................................................................1990.222000000000002
...........TGCTACCTTCGTAAG...............................................................................................................................................1590.222000000000002
......TCGGCTGCTACCTTCGTAAGGCGC...........................................................................................................................................2490.222000000011000
..AATGTCGGCTGCTACCTTCGTAAGGCGC...........................................................................................................................................2890.222000000020000
....TGTCGGCTGCTACCTTCGTAAGGC.............................................................................................................................................2490.222000000101000
..............................................................................................AATTCTGGAACAGAC............................................................1550.201000000000001
...................................................................................GTTTACCGTCAAATTCTGGA..................................................................2050.201000000000001
.TAATGTCGGCTGCTACCTTCGTA.................................................................................................................................................23100.202000000011000
...................................................................................GTTTACCGTCAAATTC......................................................................1650.201000000000001
........................................................................................................................................TCAA-------TGTTTGGATTCAA.........1750.201000000000001
...................................................................................GTTTACCGTCAAATTCTGG...................................................................1950.201000000000001
................................................................................................TTCTGGAACAGACTT..........................................................1560.171000000000001
...........................CGCAAATATTTTGTAGGCTGC------AGT................................................................................................................2470.141000000010000
...........................CGCAAATATTTTGTAGGCTGC------...................................................................................................................2170.141000000000001
..............TACCTTCGTAAGGCGCAAAT.......................................................................................................................................2080.131000000000001
..AATGTCGGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................3080.131000000010000
..............TACCTTCGTAAGGCGCAAATATTTTGT................................................................................................................................2780.131000000100000
..................TTCGTAAGGCGCAAATATTTTGTA...............................................................................................................................2480.131000000001000
.............CTACCTTCGTAAGGCGCAAATATTTTGTA...............................................................................................................................2980.131000000010000
................CCTTCGTAAGGCGCAAATATTTTGTA...............................................................................................................................2680.131000000001000
..............TACCTTCGTAAGGCGCAAATATTT...................................................................................................................................2480.131000000000001
..............TACCTTCGTAAGGCGCAAATATTTTG.................................................................................................................................2680.131000000000001
..............TACCTTCGTAAGGCGCAAATA......................................................................................................................................2180.131000000000001
..AATGTCGGCTGCTACCTTCGTAAGGC.............................................................................................................................................2690.111000000001000
.......CGGCTGCTACCTTCGTAAGGC.............................................................................................................................................2190.111000000000001
...ATGTCGGCTGCTACCTTCGTAAGG..............................................................................................................................................2490.111000000010000
.TAATGTCGGCTGCTACCTTCGTAAGGCGCA..........................................................................................................................................3090.111000000010000
..............TACCTTCGTAAGGCGC...........................................................................................................................................1690.111000000000001
...........TGCTACCTTCGTAAGGCG............................................................................................................................................1890.111000000010000
...ATGTCGGCTGCTACCTTCGTAAGGCGC...........................................................................................................................................2790.111000000010000
.......CGGCTGCTACCTTCGTAAGGCGC...........................................................................................................................................2390.111000000001000
.........GCTGCTACCTTCGTAA................................................................................................................................................1690.111000000001000
........GGCTGCTACCTTCGTAAGGCGCA..........................................................................................................................................2390.111000000001000
...........TGCTACCTTCGTAAGGCGCA..........................................................................................................................................2090.111000000000001
............GCTACCTTCGTAAGG..............................................................................................................................................1590.111000000001000
..............TACCTTCGTAAGGCG............................................................................................................................................1590.111000000000001
......................................................................................TACCGTCAAATTCTGGAACAGA.............................................................22100.101000000000001
............................GCAAATATTTTGTAGGC............................................................................................................................17110.091000000000001
........................................................................................CCGTCAAATTCTGGA..................................................................15110.091000000001000
.....................................................................................................................................CACTCAA-------TGTTTGGA..............15110.091000000001000
......................................................................................TACCGTCAAATTCTGGAACA...............................................................20110.091000000000001
.TAATGTCGGCTGCTA.........................................................................................................................................................15120.081000000000001
.TAATGTCGGCTGCTACCTT.....................................................................................................................................................19120.081000000000001
droSec2
ATAATGTCGGCTGCTACCTTCGTAAGGCGCAAGTATTTTGTAGGCTGC------AGTCTGTCTCCAGGAAACGTAAATTTCCTGTTTACCGTCAAATTCTGGAACAGACTGGACCATATCAAGGGGCTCATTACACTCAA-------TGTTTGGATTCAAT-TCTATTTSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...............................................................................................ATTCTGGAACAGACTGGACCATATCA................................................2611.0010100
...............................................................................................ATTCTGGAACAGACTGGACCATA...................................................2311.0010001
...............................................................................................ATTCTGGAACAGACTGGACCATAT..................................................2411.0010001
...............................................................................................ATTCTGGAACAGACTGGACCATATC.................................................2511.0010001
...............................................................................................................................TCATTACACTCAA-------TGTTTGGATTCAA.........2611.0010001
.TAATGTCGGCTGCTACCTTCGTAAGG..............................................................................................................................................26200.2040013
...............................................................................TCCTGTTTACCGTCAAATTCTGGAAC................................................................2660.1710001
......................................................................................TACCGTCAAATTCTGGAACAGAC............................................................2360.1710001
..............................................................................TTCCTGTTTACCGTCAAATTCTGG...................................................................2460.1710001
.....................................................................................TTACCGTCAAATTCTGGAACAGACT...........................................................2560.1710001
....TGTCGGCTGCTACCTTCGTAAGGCGC...........................................................................................................................................26200.1530102
ATAATGTCGGCTGCTACCTTCGTAAGG..............................................................................................................................................27200.1020101
.......CGGCTGCTACCTTCGTAAGGCGCAA.........................................................................................................................................25200.0510100
.TAATGTCGGCTGCTACCTTCGTAAGGCG............................................................................................................................................28200.0511000
droEre2
GTAATGTCGGCTGCCGCCTTCGTAAGGTTCAAATAATTTGTATGTCGCAGTTGCGGCCTGTCTCCAGGAAACGCAATTTTCTTGTTTCCCGTCAAATTCCGGGACGGATTTTACCATGTCGAGAGGTTCGTTGCACTCGC-------TTCCTGGTCTAATT-TCAATTTSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
No Reads
droYak3
ATAATGTCGCCTGCTACATTCGTAAGGAGCAAATATTTTGTAGGCTGCAGTGGCGGCCTGTCTCCAGGAAACGTTATTTTCCTGTTTACCGTCAAATTCTAGAACAGACTTGAGCATATCAAGGGGCTCATTACACTCAA-------TTTTTCGATTCAAT-TCGATTTSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
No Reads
droEug1
GTAGTCTCGACTACTACCGTCGTATGGCTCAAATACTTTATAGGCTGCGGTGGC-GTCTGCCTCCAGGATATATAATTTTCCTGGCTACCATCAAATTCTGGAATCGACTTGACCATATCAAGGGGTTCGTTGCACTGTA-------TCTCAGGTTTCAAT-TCGATTTSizeHit CountTotal NormTotal
No Reads
droBia1
GTAAAAGCGACTGCTCCCTTCATAGGGCTCAAATACCCTGTAGGCTGCGATATCAGCTTGTCTCCAGGAAACATAATTTTCTTGTTTCCCGTCGAATTCTGGGACGGACTTGATAATGTCCAGGGGCTCATTACATTGCT-------TTTCAGGTTCTATT-TGAATCTSizeHit CountTotal NormTotal
No Reads
droTak1
ATAATGTCTACTACTGCCGTCATAAGGCTCGAATACTTTATAAGCCGCGGTGGCGGCCTGCCTCCAGGAAACGTAATTTTCCTGTTTGCCGTCGAATTCTGGGACTGACTTGACCATGTCGAGGGGTTCATTACACTGTA-------TGTCTGGCTTTAGT-TCTATTTSizeHit CountTotal NormTotal
No Reads
droEle1
TTAATGTCGGCTGCTGCCTTTGTATGGCTCAAATACCCTATATGCTGCAGTAGCAGCCTGCCTCCAGGAAACATAGTTTTCCTGCTTCCCGTCGAATTCCGGGACAGATTTTACCATGTCCAGGGGCTCGTTACATTCTT-------TTTCCGGTTCTATT-TCTATTTSizeHit CountTotal NormTotal
No Reads
droRho1
ATAATGTCGGCTGCTGCCTTCATAGCCCTCAAATACTTTGTAGGCTGCGGTGGCAGCTTGTCTCCAGCAAACATAATTTTCCTGTTTACCGTCGAATTCTGGGACTGACTTGACCATGTCAAGAGGTTCGTCACAACGTA----CTCTTTGTGGTTCTAAT-TTAATTTSizeHit CountTotal NormTotal
No Reads
droFic1
ATAGTGACGGCTACTGCCATCATATGACTCAAATACCTTATAAGCTGTTATCTCAGCCTGCCTCCAGGAAACGTAATTTTCCTGTTTGCCGTCAAATTCTGGGACTGATTTTACCATGTCAAGGGGTTAATTACATATTA-------CTTCTGGTCTCAAT-TCAATTTSizeHit CountTotal NormTotal
No Reads
droKik1
ATAATGGCGGCTGCTGCCTTCATAGTTTTCGAAAACTTTATATGCTGCACAGGCAGCTTGTCTCCAGGAAATGTAATTTTCCTGCTTCCCATCAAATGTTGGGACCGACTTCACCATGTCGAGTGGTTCGTCGCAAAATA----CCTCTTCTGGCTTAAGC-TCAATTTSizeHit CountTotal NormTotal
No Reads
droAna3
ATAGTGTCGGCTACTGCCATCATAAGGTTCAAAAACCTTATAGGCTGCGGTGGCGGCTTGCCTCCAGGAAACATAATCCTCCTGCTTCCCGTCAAATTCGGGGACTGACTTGACCATGTCAAGGGGTTCATTACACAGTA-------TGTTTGTTTTTAAT-TCAATTTSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
...........TACTGCCATCATAAGGTTCAAAAACCT...................................................................................................................................2770.433000030
.....................................................................AACATAATCCTCCTGCTTCCCGTCAAA.........................................................................2730.331000010
.........................................................................TAATCCTCCTGCTTCCCGTCAAATTC......................................................................2630.331000100
.........................................................................TAATCCTCCTGCTTCCCGTCAAATTCGG....................................................................2830.331000010
....................................................................AAACATAATCCTCCTGCTTCCCGT.............................................................................2430.331000010
....................................................................AAACATAATCCTCCTGCTTCCCGTC............................................................................2530.331000010
...........................................................................................TCAAATTCGGGGACTGACTTGACCATGT..................................................2840.251000010
...........................................................................................TCAAATTCGGGGACTGACTTGACCAT....................................................2640.251000010
..........................................................TGCCTCCAGGAAACATAATCCTCCTGC....................................................................................2740.251000010
....................................................GCGGCTTGCCTCCAGGAAACATAATCCTC........................................................................................2940.251000010
.............................CAAAAACCTTATAGGCTGCGGTGGCG..................................................................................................................2690.222000020
......TCGGCTACTGCCATCATAAGGTTCAAA........................................................................................................................................2760.171000010
.............................................................................................AAATTCGGGGACTGACTTGACCATGTC.................................................2760.171000010
................................................................................................TTCGGGGACTGACTTGACCATGTCAA...............................................2660.171000010
.................................................................................................TCGGGGACTGACTTGACCATGTCAAGG.............................................2760.171000010
...........TACTGCCATCATAAGGTTCAAAAACCTTA.................................................................................................................................2970.141000001
.........GCTACTGCCATCATAAGGTTCAAA........................................................................................................................................2470.141000010
.............................................TGCGGTGGCGGCTTGCCTCCAGGAAAC.................................................................................................2770.141000001
........................................TAGGCTGCGGTGGCGGCTTGCCTCCAG......................................................................................................2770.141000010
..................................................................................................................CATGTCAAGGGGTTCATTACACAGTA-------......................2670.141000001
..............TGCCATCATAAGGTTCAAAAACCTTA.................................................................................................................................2670.141000001
............ACTGCCATCATAAGGTTCAAAAACCTTA.................................................................................................................................2870.141000001
......................................TATAGGCTGCGGTGGCGGCTTGCCTC.........................................................................................................2690.111000001
.................................AACCTTATAGGCTGCGGTGG....................................................................................................................2090.111000010
..............................AAAAACCTTATAGGCTGCGGTGGCGGC................................................................................................................2790.111000001
.................................AACCTTATAGGCTGCGGTGGCGG.................................................................................................................2390.111000001
............................TCAAAAACCTTATAGGCTGCGGTGGC...................................................................................................................2690.111000010
..........................GTTCAAAAACCTTATAGGCTGC.........................................................................................................................22100.101000001
droBip1
ATAATGTCGGCTACTGCCATCATAAGGTTCAAAAACCTTATAAGCTGCGGTGGTGGCTTGCCTCCAAGAAACATAATTTTCCTGCTTGCCTTCAAATTCTGGGACTGATTTGACCATGTCAAGGGGTTCATAACACTGCA-------TCTCTGTTTTTAAT-TCAATTTSizeHit CountTotal NormTotal
No Reads
dp5
GTAATGTCTAGCGCTGCCCTCATAGGGCTCGAAAGTTTTATAGGCCGCCAGCGCTGCCTGGCGCCAAGCCACATAATTTTCCTGTTTGCCGTCGAACTCGGGGACGGACTTAACCATGTCCAATGGCTGATCACACTGGA-------CATCGGGACTTATT-TCTATCTSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
..............................................................................................................TAACCATGTCCAATGGCTGATCACAC.................................26825.25202000019903
.............................................................................................GAACTCGGGGACGGACTTAACCATG...................................................25712.869000009000
...........................................................................................................................TGGCTGATCACACTGGA-------CATCGGGA..............25610.006000006000
......................................TATAGGCCGCCAGCGCTGCCTGGCGC.........................................................................................................2639.672900002900
...............................................................................TCCTGTTTGCCGTCGAACTCGGGG..................................................................2466.333800003800
.............................................................................................GAACTCGGGGACGGACTTAACCATGT..................................................2676.144301004110
..................................................................................................................................TCACACTGGA-------CATCGGGACTTATT-TC.....2615.0051000400
.............................................................................................GAACTCGGGGACGGACTTAACCATGTC.................................................2774.713300003210
......................................TATAGGCCGCCAGCGCTGCCTGGCGCC........................................................................................................2734.331300001201
...........................................................................................TCGAACTCGGGGACGGACTTAACCA.....................................................2584.253400003400
.TAATGTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2544.001600001600
...............................................................................TCCTGTTTGCCGTCGAACTCGGGGAC................................................................2663.672200002200
.................................................................................................TCGGGGACGGACTTAACCATGTCC................................................2493.673300003300
.................................................................................................TCGGGGACGGACTTAACCATGTCCAA..............................................2693.563200003200
.................................................................................................TCGGGGACGGACTTAACCATGTCCA...............................................2593.563200003200
.............................................................................................GAACTCGGGGACGGACTTAACCA.....................................................2383.502810002700
.............................................................................................................TTAACCATGTCCAATGGCTGATCACAC.................................2783.132500002410
..................................................................................................................CATGTCCAATGGCTGATCACACTGGA-------C.....................2782.752200002200
...............................................................................TCCTGTTTGCCGTCGAACTCGGG...................................................................2362.671601001500
...............................................................................................................AACCATGTCCAATGGCTGATCACAC.................................2582.632100002001
.....................................TTATAGGCCGCCAGCGCTGCCTGGCGC.........................................................................................................2732.3370000700
............................................................................................CGAACTCGGGGACGGACTTAACCA.....................................................2482.131700001601
......................................................................................TGCCGTCGAACTCGGGGACGGACT...........................................................2472.001400001400
........................................TAGGCCGCCAGCGCTGCCTGGCGC.........................................................................................................2432.0060000600
..............................................................................................AACTCGGGGACGGACTTAACCATG...................................................2471.861300001300
...........................................................................................................................TGGCTGATCACACTGGA-------CATCGGG...............2461.831101001000
......................................TATAGGCCGCCAGCGCTGCCTGG............................................................................................................2331.6750000500
....................................................................................................................TGTCCAATGGCTGATCACACTGGA-------CA....................2681.631300001300
............................................................................................CGAACTCGGGGACGGACTTAACCATG...................................................2671.571100001001
......................................TATAGGCCGCCAGCGCTGCCTG.............................................................................................................2241.5060000600
...............................................................................TCCTGTTTGCCGTCGAACTCGGGGA.................................................................2561.5090000900
....TGTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2241.5060000600
...........................................................................................TCGAACTCGGGGACGGACTTAACCATG...................................................2771.43101000900
.............................................................................................GAACTCGGGGACGGACTTAACCAT....................................................2481.381100001010
.............................................................................................GAACTCGGGGACGGACTTAACC......................................................2281.381100001100
..............................................................................................................TAACCATGTCCAATGGCTGATCACACT................................2781.381100001100
.......................................ATAGGCCGCCAGCGCTGCCTGGCGC.........................................................................................................2531.3340000400
......................................TATAGGCCGCCAGCGCTGCCTGGCG..........................................................................................................2531.3340000400
.....................................TTATAGGCCGCCAGCGCTGCCTGG............................................................................................................2431.3340000400
........................................TAGGCCGCCAGCGCTGCCTGGCGCC........................................................................................................2531.3340000400
....TGTCTAGCGCTGCCCTCATAG................................................................................................................................................2141.2550000500
...........................................................................................TCGAACTCGGGGACGGACTTAACC......................................................2481.251000001000
.........................................................................TAATTTTCCTGTTTGCCGTCGAAC........................................................................2441.2550000500
............................................................................TTTTCCTGTTTGCCGTCGAACTCGGG...................................................................2651.2060000600
...............................................................................................................................TGATCACACTGGA-------CATCGGGA..............2171.1480000800
......................................................................................................................TCCAATGGCTGATCACACTGGA-------CA....................2481.1390000900
............................TCGAAAGTTTTATAGGCCGCCAGCGC...................................................................................................................2641.0040000301
......................................................TGCCTGGCGCCAAGCCACATAATTT..........................................................................................2541.0040000400
...................................................................................................................................CACACTGGA-------CATCGGGACTTATT-T......2411.0010000100
...............................................................................TCCTGTTTGCCGTCGAACTCGGGGACG...............................................................2761.0060000600
..................................................................................................................................TCACACTGGA-------CATCGGGACTTATT-TCTA...2811.0010000100
...............................................................................................................................TGATCACACTGGA-------CATCGGGACTTATT-.......2711.0010000100
............................................................................................................................GGCTGATCACACTGGA-------CATCGGGA..............2471.0070000700
...................................................................................................................................CACACTGGA-------CATCGGGACTTATT-.......2311.0010000100
........................................................................................................................................TGGA-------CATCGGGACTTATT-TCTATC.2411.0010000100
......................................TATAGGCCGCCAGCGCTGCCTGGC...........................................................................................................2431.0030000300
..................................................................................................................CATGTCCAATGGCTGATCACACTGGA-------......................2680.8870000700
..............................................................................................AACTCGGGGACGGACTTAACCATGTC.................................................2670.8660000600
..........................................................................................................................ATGGCTGATCACACTGGA-------CATCGGGA..............2660.8350000500
................................................CAGCGCTGCCTGGCGCCAAGCCACAT...............................................................................................2640.7530000300
..............................................................................................................TAACCATGTCCAATGGCTGATCACA..................................2580.7560000600
...................................TTTTATAGGCCGCCAGCGCTGCCTG.............................................................................................................2540.7530000300
................................................................................................................ACCATGTCCAATGGCTGATCACAC.................................2480.7560000600
GTAATGTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2640.7530000300
.................................................................................................TCGGGGACGGACTTAACCATGTC.................................................2390.6760000600
......................................TATAGGCCGCCAGCGCTGCCTGGCGCCA.......................................................................................................2830.6720000200
.......................................ATAGGCCGCCAGCGCTGCCTGGCG..........................................................................................................2430.6720000200
........................................TAGGCCGCCAGCGCTGCCTGGCG..........................................................................................................2330.6720000200
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGGGAC................................................................2860.6740001300
.....................................TTATAGGCCGCCAGCGCTGCCTGGCGCC........................................................................................................2830.6720000200
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGGG..................................................................2660.6740000400
.....................................TTATAGGCCGCCAGCGCTGCCTGGC...........................................................................................................2530.6720000200
..............................................................................TTCCTGTTTGCCGTCGAACTCGGGGAC................................................................2760.6740000400
............................................................................................CGAACTCGGGGACGGACTTAACC......................................................2380.6350000410
.................................................................................................................CCATGTCCAATGGCTGATCACAC.................................2380.6350000500
..........................................................................................GTCGAACTCGGGGACGGACTTAAC.......................................................2480.6350000500
............................................................................................CGAACTCGGGGACGGACTTAACCATGTC.................................................2870.5740000400
......................................................................................TGCCGTCGAACTCGGGGACGGACTT..........................................................2570.5740000400
......................................TATAGGCCGCCAGCGCTGC................................................................................................................1940.5020000200
...............................................................................................................................TGATCACACTGGA-------CATCGG................1980.5040000400
...............................................................................TCCTGTTTGCCGTCGAACTCGG....................................................................2260.5030100200
............................TCGAAAGTTTTATAGGCCGCCAGC.....................................................................................................................2440.5020000200
................................................................................CCTGTTTGCCGTCGAACTCGGGG..................................................................2360.5030000300
.............................................................................TTTCCTGTTTGCCGTCGAA.........................................................................1980.5040000400
..................................................................................................................CATGTCCAATGGCTGATCACACTGG..............................2580.5040000400
...........................................................................................TCGAACTCGGGGACGGACTTAAC.......................................................2380.5040000400
................................................CAGCGCTGCCTGGCGCCAAGCCACA................................................................................................2540.5020000200
..............................................................................TTCCTGTTTGCCGTCGAACTCGGGGA.................................................................2660.5031000200
................................................................................CCTGTTTGCCGTCGAACTCGGGGA.................................................................2460.5030000300
......................................TATAGGCCGCCAGCGCTGCC...............................................................................................................2040.5020000200
............................................................................................................CTTAACCATGTCCAATGGCTGATCACAC.................................2880.5040000400
...ATGTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2340.5020000200
..................................................................................................................CATGTCCAATGGCTGATCACACTGGA-------CA....................2880.5040000400
..................................................................................................CGGGGACGGACTTAACCATGTCCAA..............................................2590.4440000400
..................................................................................................CGGGGACGGACTTAACCATGTCC................................................2390.4440000400
...........................................................................................................................TGGCTGATCACACTGGA-------CATCGG................2370.4330000300
..............................................................................................AACTCGGGGACGGACTTAACCATGT..................................................2570.4330000300
..............................................................................................AACTCGGGGACGGACTTAACCATGTCC................................................2770.4330000300
....................................................................................................................TGTCCAATGGCTGATCACACTGGA-------CAT...................2770.4330000300
......................................................................................TGCCGTCGAACTCGGGGACGGA.............................................................2270.4330000300
...............................................................................................................................TGATCACACTGGA-------CATCGGG...............2070.4330000300
..................................................................................................................CATGTCCAATGGCTGATCACACTGGA-------CAT...................2970.4330000300
..................................................................................................................CATGTCCAATGGCTGATCACACTG...............................2480.3830000300
..........................................................................................GTCGAACTCGGGGACGGACTTAACC......................................................2580.3830000300
............................................................................................CGAACTCGGGGACGGACTTAACCAT....................................................2580.3830000300
.............................................................................................................TTAACCATGTCCAATGGCTGATCACACT................................2880.3830000300
..............................................................................................AACTCGGGGACGGACTTAACCAT....................................................2380.3830000300
.................................................................................................TCGGGGACGGACTTAACCATGTCCAAT.............................................2780.3830000300
..........................................................................................GTCGAACTCGGGGACGGACTTAACCA.....................................................2680.3830000300
..............................................................................................................TAACCATGTCCAATGGCTGATCACACTG...............................2880.3830000300
....................................TTTATAGGCCGCCAGCGCTGCCTGG............................................................................................................2530.3310000100
................................................................................CCTGTTTGCCGTCGAACTCGGGGAC................................................................2560.3320000200
.........................................................................................................................AATGGCTGATCACACTGGA-------CATCGGGA..............2760.3320000200
..................................................................................................CGGGGACGGACTTAACCATGTCCA...............................................2490.3330000300
.................................................................................................TCGGGGACGGACTTAACCATGT..................................................2290.3330000300
.......................................ATAGGCCGCCAGCGCTGCCTGGCGCC........................................................................................................2630.3310000100
.......................................ATAGGCCGCCAGCGCTGCCTGGC...........................................................................................................2330.3310000100
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGG...................................................................2560.3320000200
....TGTCTAGCGCTGCCCTCATAGGG..............................................................................................................................................2330.3310000100
..............................................................................TTCCTGTTTGCCGTCGAACTCGGG...................................................................2460.3320000200
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGGGA.................................................................2760.3320000200
.............................................................................TTTCCTGTTTGCCGTCGAAC........................................................................2060.3320000200
......................................................................................................................TCCAATGGCTGATCACACTGGA-------CATCGG................2870.2920000200
...........................................................................................................................TGGCTGATCACACTGGA-------CATCG.................2270.2920000200
............................................................................................................................GGCTGATCACACTGGA-------CATCGGG...............2370.2920000200
.......................................................................................GCCGTCGAACTCGGGGACGGACT...........................................................2370.2920000200
.................................................................................CTGTTTGCCGTCGAACTCGGGGACG...............................................................2570.2920000200
...............................................................................................ACTCGGGGACGGACTTAACCATGT..................................................2470.2920000200
.....................................................................................TTGCCGTCGAACTCGGGGACGGAC............................................................2470.2920000200
......................................................................................TGCCGTCGAACTCGGGGACGGAC............................................................2370.2920000200
..................................................................................................................................TCACACTGGA-------CATCGGGA..............1870.2920000200
.....................................................................................TTGCCGTCGAACTCGGGGACGGACTTA.........................................................2770.2920000200
.................................................................................................................CCATGTCCAATGGCTGATCACACT................................2480.2520000200
....................................TTTATAGGCCGCCAGCGCTGCCTG.............................................................................................................2440.2510000100
.......................................................................CATAATTTTCCTGTTTGCCGTCGAAC........................................................................2640.2510000100
GTAATGTCTAGCGCTGCCCTCA...................................................................................................................................................2240.2510000100
..........................................................TGGCGCCAAGCCACATAATTTTCCTGT....................................................................................2740.2510000100
...........................CTCGAAAGTTTTATAGGCCGCCAGCGC...................................................................................................................2740.2510000100
...................................TTTTATAGGCCGCCAGCG....................................................................................................................1840.2510000100
.TAATGTCTAGCGCTGCCCTC....................................................................................................................................................2040.2510000100
.................................................................................................................CCATGTCCAATGGCTGATCACACTG...............................2580.2520000200
.....................................TTATAGGCCGCCAGCGCTGCCT..............................................................................................................2240.2510000100
GTAATGTCTAGCGCTGCCCTCATA.................................................................................................................................................2440.2510000100
.................................................................................................TCGGGGACGGACTTAACCATGTCCAATG............................................2880.2520000200
....................................................................................................................TGTCCAATGGCTGATCACACTGG..............................2380.2520000200
................................................CAGCGCTGCCTGGCGCCAAGCCAC.................................................................................................2440.2510000100
.....................................TTATAGGCCGCCAGCGCTGCCTG.............................................................................................................2340.2510000100
.....................................TTATAGGCCGCCAGCGCTG.................................................................................................................1940.2510000100
...................................TTTTATAGGCCGCCAGCGCTG.................................................................................................................2140.2510000100
........................................................................ATAATTTTCCTGTTTGCCGTCGAAC........................................................................2540.2510000100
...............................................CCAGCGCTGCCTGGCGCCAAGCCAC.................................................................................................2540.2510000100
.....................................TTATAGGCCGCCAGCGCTGCC...............................................................................................................2140.2510000100
GTAATGTCTAGCGCTGCCCTCAT..................................................................................................................................................2340.2510000100
..........................................................TGGCGCCAAGCCACATAATTTTCCTGTT...................................................................................2840.2510000100
...................................TTTTATAGGCCGCCAGCGCTGCCT..............................................................................................................2440.2510000100
..............................................................................................AACTCGGGGACGGACTTAACCA.....................................................2280.2520000200
...................................TTTTATAGGCCGCCAGCGCTGCC...............................................................................................................2340.2510000100
............................TCGAAAGTTTTATAGGCCGCCAGCGCTG.................................................................................................................2840.2510000100
.....................................................................CACATAATTTTCCTGTTTGCCGTCGAAC........................................................................2840.2510000100
.....GTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2140.2510000100
............................TCGAAAGTTTTATAGGCCGCCAGCGCT..................................................................................................................2740.2510000100
....................................TTTATAGGCCGCCAGCGCTGCCT..............................................................................................................2340.2510000100
............................TCGAAAGTTTTATAGGCCGCC........................................................................................................................2140.2510000100
..AATGTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2440.2510000100
......................................TATAGGCCGCCAGCGCTG.................................................................................................................1840.2510000100
.....................................TTATAGGCCGCCAGCGCTGC................................................................................................................2040.2510000100
..............................................................................................................TAACCATGTCCAATGGCTGATC.....................................2280.2520000200
..................................................................................................CGGGGACGGACTTAACCATGTCCAATGG...........................................2880.2520000200
...........................CTCGAAAGTTTTATAGGCCGCCAGCG....................................................................................................................2640.2510000100
......TCTAGCGCTGCCCTCATAGG...............................................................................................................................................2040.2510000100
.................................................................................................TCGGGGACGGACTTAACCATG...................................................2190.2220000200
.......................................................................................................ACGGACTTAACCATGTCCAATGGC..........................................2490.2220000200
............................................................................TTTTCCTGTTTGCCGTCGAACTCGG....................................................................2550.2010000100
............................................................................TTTTCCTGTTTGCCGTCGAACTCG.....................................................................2450.2010000100
...................TCATAGGGCTCGAAAGTTTTATAGG.............................................................................................................................2550.2011000000
...................................................................GCCACATAATTTTCCTGTTTGCCGTCG...........................................................................2750.2010000100
..................................................................AGCCACATAATTTTCCTGTTTGCCGTC............................................................................2750.2010000100
.................................................................AAGCCACATAATTTTCCTGTTTGCCGT.............................................................................2750.2010000100
.........................................................................TAATTTTCCTGTTTGCCGTCG...........................................................................2150.2010000100
........................................................................................................................CAATGGCTGATCACACTGGA-------CATCGGG...............2760.1710000100
................................................................................CCTGTTTGCCGTCGAACTCGG....................................................................2160.1710000100
................................................................................CCTGTTTGCCGTCGAACTCGGGGACG...............................................................2660.1710000100
.............................................................................TTTCCTGTTTGCCGTCGAACTCGG....................................................................2460.1710000100
...............................................................................TCCTGTTTGCCGTCGAACTCG.....................................................................2160.1710000100
................................................................................CCTGTTTGCCGTCGAACTCGGG...................................................................2260.1710000100
..........................................................................................................................ATGGCTGATCACACTGGA-------CATCGGG...............2560.1710000100
........................................................................................................................CAATGGCTGATCACACTGGA-------CATCGGGA..............2860.1710000100
...............................................................................TCCTGTTTGCCGTCGAACT.......................................................................1960.1710000100
..............................................................................TTCCTGTTTGCCGTCGAACTCGG....................................................................2360.1710000100
...............................................................................................ACTCGGGGACGGACTTAACCATG...................................................2370.1410000100
..................................................................................TGTTTGCCGTCGAACTCGGGGACG...............................................................2470.1410000100
.......................................................................................GCCGTCGAACTCGGGGACGGACTTAACC......................................................2870.1410000100
................................................................................................CTCGGGGACGGACTTAACCATGTCC................................................2570.1410000100
.................................................................................CTGTTTGCCGTCGAACTCGGGGACGGA.............................................................2770.1410000100
.....................................................................................TTGCCGTCGAACTCGGGGACG...............................................................2170.1410000100
...........................................................................ATTTTCCTGTTTGCCGTCG...........................................................................1970.1410000100
......................................................................................................................TCCAATGGCTGATCACACTGGA-------CATC..................2670.1410000100
......................................................................................TGCCGTCGAACTCGGGGACG...............................................................2070.1410000100
.............................................................................................GAACTCGGGGACGGACTTAACCATGTCC................................................2870.1410000100
.......................................................................................GCCGTCGAACTCGGGGACGGACTT..........................................................2470.1410000100
.................................................................................CTGTTTGCCGTCGAACTCGGG...................................................................2170.1410000100
.......................................................................................GCCGTCGAACTCGGGGACGGAC............................................................2270.1410000100
.....................................................................................................................GTCCAATGGCTGATCACACTGGA-------CAT...................2670.1410000100
....................................................................................................................TGTCCAATGGCTGATCACACTGGA-------CATC..................2870.1410000100
.............................................................................................................................GCTGATCACACTGGA-------CATCGGGA..............2370.1410000100
...................................................................................GTTTGCCGTCGAACTCGGGGACG...............................................................2370.1410000100
............................................................................................CGAACTCGGGGACGGACTTAACCATGT..................................................2770.1410000100
.....................................................................................TTGCCGTCGAACTCGGGG..................................................................1870.1410000100
......................................................................................................................TCCAATGGCTGATCACACTGGA-------CAT...................2570.1410000100
..................................................................................TGTTTGCCGTCGAACTCGGGG..................................................................2170.1410000100
............................................................................TTTTCCTGTTTGCCGTCGAA.........................................................................2070.1410000100
.......................................................................................GCCGTCGAACTCGGGGACG...............................................................1970.1410000100
..............................................................................................................TAACCATGTCCAATGGCTGATCAC...................................2480.1310000100
..........................................................................................GTCGAACTCGGGGACGGACTTAA........................................................2380.1310000100
.......................................................................................................................CCAATGGCTGATCACACTG...............................1980.1310000100
.....................................................................................................................GTCCAATGGCTGATCACACTGGA-------CA....................2580.1310000100
.....................................................................................................................GTCCAATGGCTGATCACACTGG..............................2280.1310000100
.................................................................................................................CCATGTCCAATGGCTGATCACACTGGA-------C.....................2880.1310000100
........................................................................................................CGGACTTAACCATGTCCAATGGCTG........................................2580.1310000100
.............................................................................................................TTAACCATGTCCAATGGCTGA.......................................2180.1310000100
...........................................................................................................ACTTAACCATGTCCAATGGCTGATCAC...................................2780.1310000100
...............................................................................................................AACCATGTCCAATGGCTGATCACA..................................2480.1310000100
........................................................................................................CGGACTTAACCATGTCCAATGGCTGAT......................................2780.1310000100
..................................................................................................CGGGGACGGACTTAACCATGTCCAATG............................................2780.1310000100
...................................................................................................................ATGTCCAATGGCTGATCACACTGGA-------CA....................2780.1310000100
.....................................................................................................................GTCCAATGGCTGATCACACTGGA-------C.....................2480.1310000100
.......................................................................................................ACGGACTTAACCATGTCCAATGGCTGA.......................................2780.1310000100
..............................................................................................................TAACCATGTCCAATGGCTGATCA....................................2380.1310000100
.............................................................................................GAACTCGGGGACGGACTTAAC.......................................................2180.1310000100
.....................................................................................................................GTCCAATGGCTGATCACAC.................................1980.1310000100
.............................................................................................................TTAACCATGTCCAATGGCTGATCAC...................................2580.1310000100
.........................................................................................................................AATGGCTGATCACACTGGA-------CA....................2180.1310000100
.................................................................................................................CCATGTCCAATGGCTGATCACACTGG..............................2680.1310000100
...........................................................................................................................TGGCTGATCACACTGGA-------CA....................1980.1310000100
............................................................................................CGAACTCGGGGACGGACTTAAC.......................................................2280.1310000100
droPer2
GTAATGTCTAGCGCTGCCCTCATAGGGCTCGAAAGTTTTATAGGCCGCCAGCGCTGCCTGGCGCCAAGCCACATAATTTTCCTGTTTGCCGTCGAACTCGGGGACGGACTTAACCATGTCCAATGGCTGATCACACTGGA-------CATCGGGATTTATT-TCTATCTSizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
...............................................................................TCCTGTTTGCCGTCGAACTCGGGG..................................................................2493.22290000029
...............................................................................TCCTGTTTGCCGTCGAACTCGGGGAC................................................................2681.63130000013
...............................................................................TCCTGTTTGCCGTCGAACTCGGGGA.................................................................2581.50120000210
..............................................................................................................TAACCATGTCCAATGGCTGATCACAC.................................26131.23160000016
............................................................................TTTTCCTGTTTGCCGTCGAACTCGGG...................................................................2691.1110100009
............................................................................TTTTCCTGTTTGCCGTCGAACTCGG....................................................................2590.787000007
.................................................................................................TCGGGGACGGACTTAACCATGTCCAA..............................................26150.73110000011
...........................................................................................................................TGGCTGATCACACTGGA-------CATCGGGA..............25110.455000005
.............................................................................................................TTAACCATGTCCAATGGCTGATCACAC.................................27130.385000005
..................................................................................................................................TCACACTGGA-------CATCGGGATTTATT-TC.....2630.331000001
....TGTCTAGCGCTGCCCTCATAGGG..............................................................................................................................................2360.332000002
................................................................................CCTGTTTGCCGTCGAACTCGGGG..................................................................2390.333000003
............................................................................TTTTCCTGTTTGCCGTCGAACTCGGGG..................................................................2790.333100002
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGG...................................................................2590.333000003
..................................................................................TGTTTGCCGTCGAACTCGGGGACGGACT...........................................................28100.303000003
......................................................................................TGCCGTCGAACTCGGGGACGGACT...........................................................24100.303100002
..............................................................................TTCCTGTTTGCCGTCGAACTCGGGGAC................................................................2780.252000002
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGGGA.................................................................2780.252000002
...........................................................................................TCGAACTCGGGGACGGACTTAACCA.....................................................25130.233000003
...............................................................................................................AACCATGTCCAATGGCTGATCACAC.................................25130.233000003
..............................................................................TTCCTGTTTGCCGTCGAACTCGGGG..................................................................2590.222000002
............................................................................TTTTCCTGTTTGCCGTCGAACTCG.....................................................................2490.222000002
...............................................................................TCCTGTTTGCCGTCGAACTCGGG...................................................................2390.222000002
...........................................................................................................................TGGCTGATCACACTGGA-------CATCGGGATT............2790.222000002
...............................................................................TCCTGTTTGCCGTCGAACTCGG....................................................................2290.222000002
...............................................................................................................................TGATCACACTGGA-------CATCGGGATTTAT.........26100.202000002
.......................................................................................GCCGTCGAACTCGGGGACGGACT...........................................................23100.202000002
..................................................................................................................CATGTCCAATGGCTGATCACACTGGA-------C.....................27120.172000002
......................................................................................................................TCCAATGGCTGATCACACTGGA-------CA....................24120.172000002
....TGTCTAGCGCTGCCCTCATAGGGCTCG..........................................................................................................................................2760.171000001
..............................................................................................................TAACCATGTCCAATGGCTGATCACACT................................27130.152000002
..............................................................................................................TAACCATGTCCAATGGCTGATCACACTG...............................28130.152000002
...........................................................................................TCGAACTCGGGGACGGACTTAACCATG...................................................27130.152000002
.TAATGTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2570.141000001
....................................................................................................................TGTCCAATGGCTGATCACACTG...............................22140.142000002
.................................................................................................TCGGGGACGGACTTAACCATGTCCAAT.............................................27140.142000002
...ATGTCTAGCGCTGCCCTCATAGG...............................................................................................................................................2370.141000001
..........................................................................AATTTTCCTGTTTGCCGTCGAAC........................................................................2380.131000001
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGGGAC................................................................2880.131000001
...............................................................................TCCTGTTTGCCGTCGAACTCGGGGACG...............................................................2780.131000001
................................................................................CCTGTTTGCCGTCGAACTCGGGGA.................................................................2480.131000001
....................................................................CCACATAATTTTCCTGTTTGCCGTCGAAC........................................................................2980.131000001
................................................................................CCTGTTTGCCGTCGAACTCGGGGAC................................................................2580.131000001
.....................................................................CACATAATTTTCCTGTTTGCCGTCG...........................................................................2580.131000001
......................................................TGCCTGGCGCCAAGCCACATAATTT..........................................................................................2590.111000001
.............................................................................TTTCCTGTTTGCCGTCGAACTCGGGG..................................................................2690.111000001
................................................................................CCTGTTTGCCGTCGAACTCGGG...................................................................2290.111000001
..............................................................................TTCCTGTTTGCCGTCGAACTCGGG...................................................................2490.111000001
.................................................................................CTGTTTGCCGTCGAACTCGGGGACGG..............................................................26100.101000001
...............................................................................................................................TGATCACACTGGA-------CATCGGGATTTA..........25100.101000001
.....................................................................................TTGCCGTCGAACTCGGGGACGGACT...........................................................25100.101000001
...............................................................................................................................TGATCACACTGGA-------CATCGGGATT............23100.101000001
................................................................................................................................GATCACACTGGA-------CATCGGGATT............22100.101000001
..................................................................................TGTTTGCCGTCGAACTCGGGGAC................................................................23100.101000001
.....................................................................................TTGCCGTCGAACTCGGGGACGGAC............................................................24100.101000001
..................................................................................TGTTTGCCGTCGAACTCGGGGACGG..............................................................25100.101100000
......................................................................................TGCCGTCGAACTCGGGGACGGACTTA.........................................................26100.101000001
............................................................................................................................GGCTGATCACACTGGA-------CATCGGGATT............26100.101000001
...............................................................................................................................TGATCACACTGGA-------CATCGGGAT.............22100.101000001
..................................................................................................................................TCACACTGGA-------CATCGGGATTTA..........22100.101000001
......................................................................................TGCCGTCGAACTCGGGGACGGACTT..........................................................25100.101000001
....................................................................................TTTGCCGTCGAACTCGGGGACGGA.............................................................24100.101000001
................................................................CAAGCCACATAATTTTCCTGTTTGCC...............................................................................26100.101000001
....................................................................................................................TGTCCAATGGCTGATCACACTGGA-------CA....................26120.081000001
...............................................................................................................................TGATCACACTGGA-------CATCGGGA..............21120.081000001
...................................................................................................................ATGTCCAATGGCTGATCACACTGGA-------C.....................26120.081000001
.............................................................................................GAACTCGGGGACGGACTTAACCATG...................................................25130.081000001
............................................................................................CGAACTCGGGGACGGACTTAA........................................................21130.081000001
..................................................................................................................CATGTCCAATGGCTGATCACACTGG..............................25130.081000001
............................................................................................................CTTAACCATGTCCAATGGCTGATCACAC.................................28130.081000001
..............................................................................................................TAACCATGTCCAATGGCTGATCAC...................................24130.081000001
.............................................................................................................TTAACCATGTCCAATGGCTGATCAC...................................25130.081000001
................................................................................................................ACCATGTCCAATGGCTGATCACACT................................25130.081000001
................................................................................................................ACCATGTCCAATGGCTGATCACAC.................................24130.081000001
............................................................................................CGAACTCGGGGACGGACTTAACCA.....................................................24130.081000001
.............................................................................................GAACTCGGGGACGGACTTAACCATGT..................................................26130.081000001
.......................................................................................................ACGGACTTAACCATGTCCAATGGCTGA.......................................27130.081000001
.................................................................................................................CCATGTCCAATGGCTGATCACACTGGA-------......................27130.081000001
..................................................................................................................CATGTCCAATGGCTGATCAC...................................20140.071000001
.................................................................................................TCGGGGACGGACTTAACCATGTCCAATG............................................28140.071000001
..................................................................................................................CATGTCCAATGGCTGATCACA..................................21140.071000001
..................................................................................................CGGGGACGGACTTAACCATGTCCAA..............................................25150.071000001
.................................................................................................TCGGGGACGGACTTAACCATGTCCA...............................................25150.071000001
droWil2
GTAATGCCGGGCAGAACCGTCGTAGGGCTCAAATATTTCATAAGCTATTGTCGCGGCCTGCCGCCAAGCGACATATTCTTCTTGGCATCCGTTAAACTCGGGCAGAGATTTAACAATATCAAGCAGCTCATCACACTGCTCACACTTT-TCCGGGTCTATTATTATTTTSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
..............................................................................................................TAACAATATCAAGCAGCTCATCACAC.................................2625.001003007
.........................................................................TATTCTTCTTGGCATCCGTTAAAC........................................................................2443.001209003
............................................................................TCTTCTTGGCATCCGTTAAACTCGGGCA.................................................................2842.7511010010
.............................................................................................................TTAACAATATCAAGCAGCTCATCACA..................................2622.50502003
....TGCCGGGCAGAACCGTCGTAGGGC.............................................................................................................................................2422.50502003
.......................................................................................TCCGTTAAACTCGGGCAGAGATT...........................................................2342.25901008
.............................................................................................................TTAACAATATCAAGCAGCTCATCAC...................................2522.00401003
....TGCCGGGCAGAACCGTCGTAGGGCT............................................................................................................................................2522.00403001
..............................................................................................................TAACAATATCAAGCAGCTCATCACA..................................2521.50302001
.............................................................................................................TTAACAATATCAAGCAGCTCATCACAC.................................2721.50302001
.........................................................................TATTCTTCTTGGCATCCGTTAAACT.......................................................................2541.25502003
.............................CAAATATTTCATAAGCTATTGTCGCGG.................................................................................................................2751.20603003
....................................................................CGACATATTCTTCTTGGCATCCGT.............................................................................2421.00200002
....TGCCGGGCAGAACCGTCGTAGG...............................................................................................................................................2221.00202000
............................................................................TCTTCTTGGCATCCGTTAAACTCGGG...................................................................2641.00400004
.................................TATTTCATAAGCTATTGTCGCGGCC...............................................................................................................2551.00501004
.TAATGCCGGGCAGAACCGTCGTAGGGC.............................................................................................................................................2721.00202000
............................................................................................TAAACTCGGGCAGAGATTTAACAAT....................................................2560.83505000
............................................................................................TAAACTCGGGCAGAGATTTAACAATAT..................................................2750.80403001
............................................................................TCTTCTTGGCATCCGTTAAACTCGGGC..................................................................2740.75300012
.........................................................................TATTCTTCTTGGCATCCGTTAAACTCGG....................................................................2840.75301002
.................................TATTTCATAAGCTATTGTCGCGGC................................................................................................................2450.60300003
.......................................................................................TCCGTTAAACTCGGGCAGAGATTTAA........................................................2640.50202000
..............................................................................................................TAACAATATCAAGCAGCTCATCAC...................................2420.50101000
.....GCCGGGCAGAACCGTCGTAGGGCT............................................................................................................................................2420.50100001
..............................................................................................................TAACAATATCAAGCAGCTCATCACACTG...............................2820.50101000
........................................................................................................................................TGCTCACACTTT-TCCGGGTCTATTATTA....2820.50100001
.........................................................................TATTCTTCTTGGCATCCGTTAAACTCG.....................................................................2740.50200002
.....................................................................................CATCCGTTAAACTCGGGCAGAGATT...........................................................2540.50200002
.........................................................................TATTCTTCTTGGCATCCGTTAAACTCGGG...................................................................2940.50200002
..................................................................................................................................TCACACTGCTCACACTTT-TCCGGGTC............2620.50101000
...................................................................GCGACATATTCTTCTTGGCATCCGT.............................................................................2520.50100001
..................................................................................................................................TCACACTGCTCACACTTT-TCCGGGTCT...........2720.50100001
..................................................................................................................AATATCAAGCAGCTCATCACA..................................2120.50100001
............AGAACCGTCGTAGGGCTCAAATATT....................................................................................................................................2520.50100001
...............................................................................TCTTGGCATCCGTTAAACTCGGGCA.................................................................2540.50200002
.......................................................................................................................................CTGCTCACACTTT-TCCGG...............1820.50100001
..............................................................................................................TAACAATATCAAGCAGCTCATCACACTGC..............................2920.50100001
..................................................................AGCGACATATTCTTCTTGGCATCCGT.............................................................................2620.50100001
.TAATGCCGGGCAGAACCGTCGTAGGG..............................................................................................................................................2620.50101000
...............................................................................................................................TCATCACACTGCTCACACTTT-TCCGGG..............2720.50100001
...............................................................................................................AACAATATCAAGCAGCTCATCACAC.................................2520.50100001
...................................................................................................................................CACACTGCTCACACTTT-TCCGGGTC............2520.50100001
..................................................................................................................AATATCAAGCAGCTCATCACAC.................................2220.50100001
............................................................................................................TTTAACAATATCAAGCAGCTCATCACAC.................................2820.50100001
..................................................................................TGGCATCCGTTAAACTCGGGCAGAGA.............................................................2640.50201001
..........................................................TGCCGCCAAGCGACATATTCTTCTTGG....................................................................................2720.50101000
.....................................................................................................................ATCAAGCAGCTCATCACAC.................................1920.50100001
.................CGTCGTAGGGCTCAAATATTTCATAAGC............................................................................................................................2820.50100001
............................TCAAATATTTCATAAGCTATTGTCGCGG.................................................................................................................2850.40200002
....................................TTCATAAGCTATTGTCGCGGCCTGC............................................................................................................2550.40200002
.....................................TCATAAGCTATTGTCGCGGCCTGC............................................................................................................2450.40200002
....................................TTCATAAGCTATTGTCGCGGCCTG.............................................................................................................2450.40201001
..................................................................................TGGCATCCGTTAAACTCGGGCAGAGATT...........................................................2840.25100001
..............................................................................TTCTTGGCATCCGTTAAACTCGGGCAG................................................................2740.25100001
....................................TTCATAAGCTATTGTCGCGGCCTGCCGC.........................................................................................................2840.25100001
.........................................................................TATTCTTCTTGGCATCCGTTAAACTC......................................................................2640.25101000
........................................TAAGCTATTGTCGCGGCCTGCCGCCAAG.....................................................................................................2840.25100001
.......................................................................................TCCGTTAAACTCGGGCAGAGATTTA.........................................................2540.25100001
........................................TAAGCTATTGTCGCGGCCTGCCGCCA.......................................................................................................2640.25100001
..............................................................................TTCTTGGCATCCGTTAAACTCGGGC..................................................................2540.25100001
.................................................................................TTGGCATCCGTTAAACTCGGGCAGAG..............................................................2640.25100001
.............................................................................CTTCTTGGCATCCGTTAAACTCGGGC..................................................................2640.25100001
...........................................................................TTCTTCTTGGCATCCGTTAAACTCGG....................................................................2640.25100001
.....................................TCATAAGCTATTGTCGCGGCCTGCCGC.........................................................................................................2740.25101000
..........................................................................ATTCTTCTTGGCATCCGTTAAACTCG.....................................................................2640.25100001
..........................................................................ATTCTTCTTGGCATCCGTTAAAC........................................................................2340.25100001
............................................................................................TAAACTCGGGCAGAGATTTAACAATATC.................................................2850.20100001
.................................TATTTCATAAGCTATTGTCGCGGCCT..............................................................................................................2650.20100001
............................................................................................TAAACTCGGGCAGAGATTTAACAATA...................................................2650.20100001
.................................TATTTCATAAGCTATTGTCGCGGCCTG.............................................................................................................2750.20100001
..............................AAATATTTCATAAGCTATTGTCGCGGC................................................................................................................2750.20100001
............................................................................................TAAACTCGGGCAGAGATTTAACAATATCA................................................2950.20100001
................................ATATTTCATAAGCTATTGTCGCGGCC...............................................................................................................2650.20100001
droVir3
ATAGCCTCGA--GCTGCCATCATATGGCTCAATTACTTTGTAGGCGGCGCAGGCGGCCTGTCTCCATGAGACATAGTTTCCTTGTTTTCCGTCAAATTCTGGAATAGACTTTATGATATCTTAGGCTTCTTTGCATTAAA-------TCCCTGGCACTATT-TGTATTTSizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
...........................................................................................TCAAATTCTGGAATAGACTTTATGATA...................................................2711.0010000000000000000000000000000000000000010000
droMoj3
ATAGTGCCTCGAGCTGCCATCGTAAGGTTCAAAAACCTTATAAGCTGCGCAGGCAGTTTGTCTCCAAGAAACATAATTTTCTTGTTTGCCGTCAAACTCTGGAATTGACTTAACGATATCTAGGGGCTCGTCGCATTTAT-------TACCCGCGATAATT-TTTATCTSizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
.........................................................................TAATTTTCTTGTTTGCCGTCAAA.........................................................................2320.501000010
.........................................................................TAATTTTCTTGTTTGCCGTCA...........................................................................2120.501000010

Generated: 12/06/2013 at 02:30 PM