ID:

dsi_76

 Coordinate:

chrU_M_6729:10194-10247 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.9 -17.1

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GGGTCGGCTTCTCTAGCGAGTGACATTAAATCGCTTCTTATTTTAGCGGCTGAGTAATACAATTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCTGTTTTCTTGCTAGAGTATAGTCGCTTGAGGTTTT
************************************............(((((((.((((((((((((...((.......))..)))))))))))).)))).......))).......************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
Ovary		 SRR553486
Ovary		 SRR553487
Ovary		 SRR553485
Ovary		 SRR618934
Ovary		 M025
embryo
 M053
Female-body		 O001
Testis
 O002
Head
 M023
head
 GSM343915
embryo
.......................................................................................................................TGTTTTCTTGCTAGAGTATAGTCGCT......... 26 0 4 40.75 163 34 70 13 41 2 2 1 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTC................................................... 24 0 3 37.67 113 25 17 18 8 7 26 2 9 0 1 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTC................................................... 26 0 3 20.00 60 10 5 14 6 8 14 3 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGTA................. 24 0 4 15.00 60 6 2 18 5 20 0 5 4 0 0 0
.GTTCGGCTTCTGGAGCGAGTG.................................................................................................................................... 21 3 6 11.33 68 5 0 62 1 0 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGC........................................... 28 0 3 10.33 31 9 12 5 5 0 0 0 0 0 0 0
.....................................................................................................................TCTGTTTTCTTGCTAGAGTATAGTCGCT......... 28 0 4 8.25 33 12 15 1 5 0 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAA............................................. 26 0 3 8.00 24 11 9 4 0 0 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAG............................................ 27 0 3 6.00 18 7 6 1 4 0 0 0 0 0 0 0
...................................................GAGTAATACAATTTTCCCATACTGAGTC........................................................................... 28 0 5 5.80 29 0 0 0 0 9 0 20 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAAC............................................... 28 0 3 5.33 16 1 2 5 6 1 0 1 0 0 0 0
................................................................................................................TTTCTTCTGTTTTCTTGCTAGAGTA................. 25 0 4 4.75 19 8 0 5 1 4 0 1 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTC..................................................... 22 0 3 4.67 14 4 1 2 3 2 2 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACA.............................................. 25 0 3 4.67 14 5 3 2 4 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTC..................................................... 24 0 3 4.67 14 4 2 2 1 4 1 0 0 0 0 0
...................................................GAGTAATACAATTTTCCCATACTGAG............................................................................. 26 0 5 4.00 20 0 0 0 0 12 0 8 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGCA.......................................... 29 0 3 4.00 12 1 9 0 2 0 0 0 0 0 0 0
...............................................................TTTCCCATACTGAGTCCGTCCGGAAGGT............................................................... 28 0 4 4.00 16 1 4 6 4 0 1 0 0 0 0 0
..................................................TGAGTAATACAATTTTCCCATACTGA.............................................................................. 26 0 5 3.80 19 7 4 3 5 0 0 0 0 0 0 0
................................................................TTCCCATACTGAGTCCGTCCGGAAGGT............................................................... 27 0 4 3.75 15 3 2 6 3 0 1 0 0 0 0 0
..............................................................TTTTCCCATACTGAGTCCGTCCGGAAGGT............................................................... 29 0 3 3.67 11 2 2 3 4 0 0 0 0 0 0 0
.................................................................TCCCATACTGAGTCCGTCCGGAAGGT............................................................... 26 0 4 3.25 13 0 2 4 3 3 1 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTC..................................................... 25 0 3 3.00 9 5 0 2 2 0 0 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGTAGCT...................................................... 24 0 3 2.33 7 3 2 2 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCT.................................................... 23 0 3 2.33 7 3 1 1 1 1 0 0 0 0 0 0
..................................................................CCCATACTGAGTCCGTCCGGAAGGT............................................................... 25 0 4 2.25 9 1 3 2 2 1 0 0 0 0 0 0
..............................................................................CCGTCCGGAAGGTTGTGTAGCTCTC................................................... 25 0 3 2.00 6 2 0 1 0 0 3 0 0 0 0 0
.........................................................TACAATTTTCCCATACTGAGTCCGTC....................................................................... 26 0 6 2.00 12 4 1 3 2 2 0 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTCTC................................................... 27 0 3 2.00 6 1 1 1 2 1 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCT...................................................... 21 0 3 2.00 6 1 3 2 0 0 0 0 0 0 0 0
........TTCTCTAGCGAGTGACATTAAATCGC........................................................................................................................ 26 0 5 1.80 9 1 1 4 0 1 0 2 0 0 0 0
..........................................................................................................................TTTCTTGCTAGAGTATAGTCGCT......... 23 0 4 1.75 7 0 1 2 4 0 0 0 0 0 0 0
...TCGGCTTCTCTAGCGAGTGACATTAAA............................................................................................................................ 27 0 4 1.75 7 2 0 2 3 0 0 0 0 0 0 0
...................................TCTTATTTTAGCGGCTGAGTAATACAAT........................................................................................... 28 0 3 1.67 5 2 0 1 2 0 0 0 0 0 0 0
..................................TTCTTATTTTAGCGGCTGAGTAATACAA............................................................................................ 28 0 5 1.60 8 2 2 4 0 0 0 0 0 0 0 0
......................................................................TACTGAGTCCGTCCGGAAGGTTGTGT.......................................................... 26 0 4 1.50 6 2 0 1 2 1 0 0 0 0 0 0
..........................................................................................................................TTTCTTGCTAGAGTATAGTCGCTTGA...... 26 0 4 1.50 6 2 1 1 1 1 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGTATAGT............. 28 0 4 1.50 6 1 0 1 1 2 0 1 0 0 0 0
..................................................TGAGTAATACAATTTTCCCATACTGAGTC........................................................................... 29 0 5 1.40 7 1 1 1 3 0 0 1 0 0 0 0
.........TCTCTAGCGAGTGACATTAAATCGC........................................................................................................................ 25 0 5 1.40 7 3 0 1 2 1 0 0 0 0 0 0
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTAGC....................................................... 26 0 3 1.33 4 0 2 0 2 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCT.................................................... 25 0 3 1.33 4 1 1 1 0 1 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGCAT......................................... 30 0 3 1.33 4 0 2 1 1 0 0 0 0 0 0 0
...................................TCTTATTTTAGCGGCTGAGTAATACAATT.......................................................................................... 29 0 3 1.33 4 0 2 1 1 0 0 0 0 0 0 0
.....................................TTATTTTAGCGGCTGAGTAATACAAT........................................................................................... 26 0 3 1.33 4 1 1 1 1 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAA................................................ 27 0 3 1.33 4 1 2 1 0 0 0 0 0 0 0 0
...............................................................TTTCCCATACTGAGTCCGTCCGGAAGG................................................................ 27 0 4 1.25 5 1 3 1 0 0 0 0 0 0 0 0
......................................................................TACTGAGTCCGTCCGGAAGGTTGTG........................................................... 25 0 4 1.25 5 1 1 0 0 3 0 0 0 0 0 0
..............................................................................................................................TTGCTAGAGTATAGTCGCTTGAGG.... 24 0 4 1.25 5 1 0 3 0 1 0 0 0 0 0 0
..................................................TGAGTAATACAATTTTCCCATACTGAG............................................................................. 27 0 5 1.20 6 1 0 3 1 0 0 0 0 0 0 1
.................................................................................................................TTCTTCTGTTTTCTTGCTAG..................... 20 0 6 1.17 7 0 0 0 0 1 0 0 6 0 0 0
.............................................................ATTTTCCCATACTGAGTC........................................................................... 18 0 6 1.17 7 0 0 0 0 7 0 0 0 0 0 0
....................TGACATTAAATCGCTTCTTATTTTA............................................................................................................. 25 0 6 1.17 7 2 0 4 1 0 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCT....................... 18 0 6 1.17 7 0 0 0 0 7 0 0 0 0 0 0
...................................................GAGTAATACAATTTTCCC..................................................................................... 18 0 5 1.00 5 0 0 0 0 0 0 0 5 0 0 0
....................................................................................................................TTCTGTTTTCTTGCTAGAGTATAG.............. 24 0 4 1.00 4 0 0 0 0 0 0 0 0 4 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGTAT................ 25 0 4 1.00 4 0 0 1 0 3 0 0 0 0 0 0
.....................................TTATTTTAGCGGCTGAGTAATACAATT.......................................................................................... 27 0 3 1.00 3 0 2 0 0 1 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGCA.......................................... 21 0 5 1.00 5 0 0 4 1 0 0 0 0 0 0 0
..............................................................TTTTCCCATACTGAGTCCGTCCGGA................................................................... 25 0 5 1.00 5 2 0 0 3 0 0 0 0 0 0 0
.................................................................TCCCATACTGAGTCCGTCCG..................................................................... 20 0 7 1.00 7 0 0 0 0 0 0 0 7 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCAAAA................................................. 26 3 3 1.00 3 1 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................TGCTAGAGTATAGTCGCTTGAGG.... 23 0 4 1.00 4 1 3 0 0 0 0 0 0 0 0 0
..................................................................................................................TCTTCTGTTTTCTTGCTAGAGTATAGT............. 27 0 4 1.00 4 0 0 0 0 1 2 1 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGCATTTCTTC................................... 28 0 4 1.00 4 2 1 0 0 0 0 1 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCT.................................................. 25 0 3 1.00 3 2 1 0 0 0 0 0 0 0 0 0
...........................................TAGCGGCTGAGTAATACAATTTTCCCA.................................................................................... 27 0 4 1.00 4 1 0 2 0 1 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTA...................... 19 0 6 1.00 6 0 0 0 0 6 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGCATT........................................ 31 0 3 1.00 3 0 2 0 1 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTA................................................. 26 0 3 1.00 3 2 0 0 1 0 0 0 0 0 0 0
...................................................GAGTAATACAATTTTCCCA.................................................................................... 19 0 5 1.00 5 0 0 0 0 0 0 0 5 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAG................... 22 0 4 1.00 4 0 0 0 0 0 0 0 4 0 0 0
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAAC............................................... 26 0 3 1.00 3 2 0 1 0 0 0 0 0 0 0 0
.....................................................................................GAAGGTTGTGTAGCTCTCTAACAAGCA.......................................... 27 0 3 1.00 3 1 1 1 0 0 0 0 0 0 0 0
.........................................TTTAGCGGCTGAGTAATACAATTTT........................................................................................ 25 0 4 1.00 4 0 0 0 0 4 0 0 0 0 0 0
...................................................GAGTAATACAATTTTCCCATACTGAGT............................................................................ 27 0 5 0.80 4 0 0 0 0 2 0 2 0 0 0 0
...................................................GAGTAATACAATTTTCCCATACTGAGA............................................................................ 27 1 5 0.80 4 0 4 0 0 0 0 0 0 0 0 0
...................................................GAGTAATACAATTTTCCCATACTGA.............................................................................. 25 0 5 0.80 4 2 1 0 0 0 0 1 0 0 0 0
.........TCTCTAGCGAGTGACATTAAATCGCT....................................................................................................................... 26 0 5 0.80 4 0 0 3 0 1 0 0 0 0 0 0
.........................................................................................................................TTTTCTTGCTAGAGTATAGTCGCT......... 24 0 4 0.75 3 1 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................TTCTTGCTAGAGTATAGTCGCTTGA...... 25 0 4 0.75 3 2 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................TGCTAGAGTATAGTCGCTTGAGGTT.. 25 0 4 0.75 3 0 0 0 0 3 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGTATA............... 26 0 4 0.75 3 1 0 0 0 2 0 0 0 0 0 0
................................................................TTCCCATACTGAGTCCGTCCGGAAGG................................................................ 26 0 4 0.75 3 0 1 1 1 0 0 0 0 0 0 0
................................................................................................................TTTCTTCTGTTTTCTTGCTAGAGT.................. 24 0 4 0.75 3 1 0 2 0 0 0 0 0 0 0 0
...TCGGCTTCTCTAGCGAGTGACATTAAAT........................................................................................................................... 28 0 4 0.75 3 1 0 0 2 0 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGTATAG.............. 27 0 4 0.75 3 0 0 0 0 3 0 0 0 0 0 0
..............................................................TTTTCCCATACTGAGTCCGTCCGGAAGG................................................................ 28 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................GAAGGTTGTGTAGCTCTCTAACAAGC........................................... 26 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTCT.................................................... 26 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0
..................................................................................CCGGAAGGTTGTGTAGCTCTCTAACAAG............................................ 28 0 3 0.67 2 0 1 1 0 0 0 0 0 0 0 0
......................................TATTTTAGCGGCTGAGTAATACAAT........................................................................................... 25 0 3 0.67 2 0 0 0 1 1 0 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGTAGC....................................................... 23 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0
..................................................................................CCGGAAGGTTGTGTAGCTCTCTAACA.............................................. 26 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................GTTTTCTTGCTAGAGTA................. 17 0 5 0.60 3 0 0 0 0 3 0 0 0 0 0 0
...........TCTAGCGAGTGACATTAAATCGCT....................................................................................................................... 24 0 5 0.60 3 0 0 1 0 2 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAG............................................ 19 0 5 0.60 3 0 0 2 0 1 0 0 0 0 0 0
.........................................................TACAATTTTCCCATACTGAGTCCGTCCGGA................................................................... 30 0 5 0.60 3 0 0 0 3 0 0 0 0 0 0 0
..........................................................................................................................TTTCTTGCTAGAGTATAG.............. 18 0 5 0.60 3 0 0 0 0 3 0 0 0 0 0 0
......................................................TAATACAATTTTCCCATACTGAGTCCGT........................................................................ 28 0 5 0.60 3 0 0 2 1 0 0 0 0 0 0 0
.................................................CTGAGTAATACAATTTTCCCATACTGA.............................................................................. 27 0 5 0.60 3 1 0 2 0 0 0 0 0 0 0 0
................................................................................................AGCTCTCTAACAAGCATTTCTTCTGTT............................... 27 0 5 0.60 3 2 0 0 1 0 0 0 0 0 0 0
...................................................................................................TCTCTAACAAGCATTTCTTCTGTT............................... 24 0 6 0.50 3 2 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................TTTCTTGCTAGAGTATAGTCGCTT........ 24 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
...TCGGCTTCTGGAGCGAGTGA................................................................................................................................... 20 2 6 0.50 3 0 0 3 0 0 0 0 0 0 0 0
..........................................................................................................................TTTCTTGCTAGAGTATAGTCGCTTGAGG.... 28 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0
........................................................................................................................TTTTTCTTGCTAGAGTATAGTCGCT......... 25 1 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................AGGTTGTGTAGCTCTCTAACAAG............................................ 23 0 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0
...........................................TAGCGGCTGAGTAATACAATTTT........................................................................................ 23 0 4 0.50 2 0 0 0 0 2 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGT.................. 23 0 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0
...........................................TAGCGGCTGAGTAATACAATTTTCCC..................................................................................... 26 0 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0
...........................................................................................................................TTCTTGCTAGAGTATAGTCGCTTGAGG.... 27 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................TCTTGCTAGAGTATAGTCGCTTGAGG.... 26 0 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................TAGAGTATAGTCGCT......... 15 0 4 0.50 2 0 0 0 1 1 0 0 0 0 0 0
............................................................................................................AGCATTTCTTCTGTTTTCTTGCTAGAGTA................. 29 0 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0
.................................................................TCCCATACTGAGTCCGTCCGGAAGG................................................................ 25 0 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0
......................................................................................AAGGTTGTGTAGCTCTCTAAC............................................... 21 0 4 0.50 2 0 0 0 0 1 0 1 0 0 0 0
.........................................................TACAATTTTCCCATACTGAGTCCGT........................................................................ 25 0 6 0.50 3 1 0 0 1 1 0 0 0 0 0 0
..............................................................................................GTAGCTCTCTAACAAGCATTTCTTCTGTT............................... 29 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0
......................................................................TACTGAGTCCGTCCGGAAGGTTGTGTA......................................................... 27 0 4 0.50 2 0 0 1 1 0 0 0 0 0 0 0
.....................................................................................................................TCTGTTTTCTTGCTAGAGTATAGTCGC.......... 27 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0
......................................................................................AAGGTTGTGTAGCTCTCTAACAAGCATT........................................ 28 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0
..................................................TGAGTAATACAATTTTCCCATACTGAGA............................................................................ 28 1 5 0.40 2 0 1 1 0 0 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGC........................................... 20 0 5 0.40 2 0 0 1 0 1 0 0 0 0 0 0
.............................................................ATTTTCCCATACTGAGTCCGTCCGGA................................................................... 26 0 5 0.40 2 1 0 0 0 1 0 0 0 0 0 0
..................................................TGAGTAATACAATTTTCCCATACTGAGT............................................................................ 28 0 5 0.40 2 0 0 1 1 0 0 0 0 0 0 0
............................................................AATTTTCCCATACTGAGTCCGTCCGGA................................................................... 27 0 5 0.40 2 0 0 0 2 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTA......................................................... 20 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0 0
........TTCTCTAGCGAGTGACATTAAATCGCT....................................................................................................................... 27 0 5 0.40 2 0 0 1 0 1 0 0 0 0 0 0
...................................TCTTATTTTAGCGGCTGAGTAATACAA............................................................................................ 27 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0
...........TCTAGCGAGTGACATTAAATCGCTTC..................................................................................................................... 26 0 5 0.40 2 0 0 1 0 1 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGTT.......................................... 21 2 5 0.40 2 0 0 1 1 0 0 0 0 0 0 0
...................................TCTTATTTTAGCGGCTGAGTAATACA............................................................................................. 26 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................TCTGTTTTCTTGCTAGAG................... 18 0 5 0.40 2 0 0 0 0 0 0 0 0 0 2 0
..................................................TGAGTAATACAATTTTCCCATACT................................................................................ 24 0 5 0.40 2 1 0 0 1 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTCTAAC............................................... 30 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................GAAGGTTGTGTAGCTCTCTAACAA............................................. 24 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................ATTTTCCCATACTGAG............................................................................. 16 0 6 0.33 2 0 0 0 0 2 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAG............................................ 33 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................ATTTTCCCATACTGAGT............................................................................ 17 0 6 0.33 2 0 0 0 0 2 0 0 0 0 0 0
............................................................................GTCCGTCCGGAATGTTGTGTAGC....................................................... 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
........................................TTTTAGCGGCTGAGGAATACAATTTT........................................................................................ 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCAAA.................................................. 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAAAA.............................................. 29 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................CCGGAAGGTTGTGTAGCTCTCTAAC............................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTAGT....................................................... 26 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................GAAGGTTGTGTAGCTCTCTAAC............................................... 22 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.......................................ATTTTAGCGGCTGAGTAATACAATTTT........................................................................................ 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTA................................................... 26 1 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTA..................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCCCTCTAACAAGCAT......................................... 30 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................TCCTTCCGGAAGGTTGTGTAGCTCTC................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAA................................................ 25 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.................................................CTGAGTAATACAATTTTCCCATACTGAA............................................................................. 28 1 6 0.33 2 0 0 0 2 0 0 0 0 0 0 0
........................................TTTTAGCGGCTGAGTAAGACAATTTT........................................................................................ 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.....................................................................................GAAGGTTGTGTAGCTCTC................................................... 18 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTCTAGCTCTCTAACAA............................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................GTCCGGAAGGTTGTGTAGCTCTC................................................... 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTAGCT...................................................... 27 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTA................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGT........................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTAAAA.............................................. 28 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTAA.................................................. 27 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAAC............................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTCC.................................................... 26 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAACA.............................................. 27 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTAAAA................................................ 27 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................CCCGTCCGGAAGGTTGTGTAGCTCTC................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAACAA............................................. 30 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTAACC.............................................. 28 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................CCGTCCGGAAGGTTGTGTAGCT...................................................... 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCCC................................................... 24 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAACAAGC........................................... 30 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTGTAGCT...................................................... 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................TCCGGAAGGTTGTGTAGCTCTC................................................... 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGC....................................................... 20 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
..........................TAAATCGCTTCTTATTTTAGCGGC........................................................................................................ 24 0 6 0.33 2 0 0 1 0 1 0 0 0 0 0 0
..................................TTCTTATTTTAGCGGCTGAGTAATACAAT........................................................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAGCTCA.................................................... 23 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTAG........................................................ 19 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................CTCCGGAAGGTTGTGTAGCTCTC................................................... 23 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTAAC............................................... 27 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................TCCGGAAGGTTGTGTAGCTCTCT.................................................. 23 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
........................................TTTTAGCGGCTGAGTAATACAATT.......................................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGTTT......................................... 30 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...................................TCTTATTTTAGCGGCTGAGTAATACAATA.......................................................................................... 29 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0
....................TGACATTAAATCGCTTCTTATTTT.............................................................................................................. 24 0 6 0.33 2 0 1 1 0 0 0 0 0 0 0 0
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTAA................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................CGGAAGGTTGTGTAGCTCTCTAATAAGC........................................... 28 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................TCTCCGGAAGGTTGTGTAGCTCTC................................................... 24 2 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................TGTTTTCTTGCTAGAGTATAGTCGAT......... 26 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
..........................................TTAGCGGCTGAGTAAGACAATTTTCCC..................................................................................... 27 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTA......................................................... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
...TCGGCTTCTCTAGCGAGTGACATTAA............................................................................................................................. 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
............................................AGCGGCTGAGTAATACAATTTTCCCA.................................................................................... 26 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................AGGTTGTGTAGCTCTC................................................... 16 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................TCCCATACTGAGTCCGTCCGGAAGGTT.............................................................. 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
................................................................TTCCCATACTGAGTCCGTCCGGAAGGG............................................................... 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................AGGTTGTGTAGCTCTCTAACAAGC........................................... 24 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................TGCTAGAGTATAGTCGCTTGAGGTTG. 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................AGCTCTCTAACAAGCATTTCTTCTGTTT.............................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................GCTAGAGTATAGTCGCTTGAGG.... 22 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................TGTTTTCTTGCTAGAGTACAGTCGCT......... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTTTCTTGCTAGAGTATAGTCGC.......... 25 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................CGGAAGTTTGTGTAGCTCTCTAACAAG............................................ 27 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTTTCTTGCTAGAGTATAGTCGCTT........ 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TAGAGTATAGTCGCTTGAGG.... 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................TGCTAGAGTATAGTCGCTTGAGAT... 24 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................ATTCTTGCTAGAGTATAGTCGCTTGAGG.... 28 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................TTCTGTTTTCTTGCTAGAGTA................. 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.........................................TTTAGCGGCTGAGTAATACAATTTTCCC..................................................................................... 28 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
................................................................TTCCCATACTGAGTCCGTCCGGAAGGTT.............................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................AGTCCGTCCGGAAGGTTGTG........................................................... 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................GGTTGTGTAGCTCTC................................................... 15 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..GTCGGCTTCTCTAGCGAGTGACATTAAA............................................................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTACAGTA................. 24 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..........................................TTAGCGGCTGAGTAATACAATTTTCCC..................................................................................... 27 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................GGTTGTGTAGCTCTCTAAC............................................... 19 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...TCGGCTTCTCTAGCGAGTG.................................................................................................................................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..GTCGGCTTCTCTAGCGAGTGA................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................CTCTTCTGTTTTCTTGCTAGAGTA................. 24 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................TCTTGCTAGAGTATAGTCGCTTGA...... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.....GGCTTCTCTAGCGAGTG.................................................................................................................................... 17 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................TTCTGTTTTCTTGCTAGAGTATAGT............. 25 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................TGTTTTCTTGCTAGAGTATAGTCGCTA........ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..........................................TTAGCGGCTGAGTAATACAATTTT........................................................................................ 24 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................TAGAGTATAGTCGCTTGAGGT... 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGCA................. 24 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
...................................................................CCATACTGAGTCCGTCCGGAAGGT............................................................... 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................GGTTGTGTAGCTCTCT.................................................. 16 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................................................GTAGCTCTCTAACAAGCATTTCTTCTG................................. 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................TACTGAGTCCGTCCGGAAGGTTGT............................................................ 24 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGCATTTCTA.................................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................TATCTTCTGTTTTCTTGCTAGA.................... 22 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
GGGTCGGCTTCTCTAGCGAGC..................................................................................................................................... 21 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
...........................................TAGCGGCTGAGTAATACAATTTTCC...................................................................................... 25 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.........................................TTTAGCGGCTGAGTAATACAATTT......................................................................................... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
.........................................TTTAGCGGCTGAGTAATACAATTTTCC...................................................................................... 27 0 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................TGTTTTCTTGCTAGAGTGTAGTCGCA......... 26 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
....CGGCTTCTCTAGCGAGTGACATTAAA............................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................TGTTTTCTTGCTAGAATATAGTCGCT......... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTTGTGT.......................................................... 20 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................TTGCTTGCTAGAGTATAGTCGCTTGA...... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
....CGGCTTCTCTAGCGAGTG.................................................................................................................................... 18 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGATTA................. 24 1 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
...........................................TAGCGGCTGAGTAATACAATTT......................................................................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...TCGGCTTCTCTAGCGAGTGACATTAAATCA......................................................................................................................... 30 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
...TCGGCTTCTCTAGCGAGGGACATTAAA............................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTTGCTAGAGTATAGTCGCTTGAGG.... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................TGAGTCCGTCCGGAAGGTTGTG........................................................... 22 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................TACTGAGTCCGTCCGGAAGGTT.............................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................TACTGAGTCCGTCCGGAAGGT............................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................GTCCGTCCGGAAGGTT.............................................................. 16 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGTATCGT............. 28 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................AAGGTTGTGTAGCTCTCTAACAAGCA.......................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................TGCTAGAGTATAGTCGCTTGAG..... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................AAGGTTGTGTAGCTCTCTAACAAGC........................................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................TTCTTCTGTTTTCTTGCTAGAGTATCGA............. 28 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................TATTTTCTTGCTAGAGTATAGTCGCT......... 26 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................ACTGAGTCCGTCCGGAAGGTTGTGTA......................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................CCCATACTGAGTCCGTCCGGAAGG................................................................ 24 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................ATCATTTCTTCTGTTTTCTTGCTAGAGTA................. 29 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................AGCTCTCTAACAAGCATTTCTTCTGT................................ 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGCATT........................................ 23 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................AATACAATTTTCCCATACTGAG............................................................................. 22 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
.........TCTCTAGCGAGTGACATTAAATCG......................................................................................................................... 24 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
...................................................GAGTAATACAATTTTCCTATACTGAG............................................................................. 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGCATTTC...................................... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGT............................................................ 17 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................TCCGTCCGGAAGGTTGTG........................................................... 18 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
..................................TTCTTATTTTAGCGGCTGAGTAATACA............................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
..............................................CGCGTGAGTAATACAATTTTCCCATACTGAG............................................................................. 31 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................TTTTCTTGCTAGAGTATAG.............. 19 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCT.................................. 25 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGCATA........................................ 23 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
...................................................GAGTAATCCAATTTTCCCATACTGAGTC........................................................................... 28 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................GTTTTCTTGCTAGAGT.................. 16 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................TTTTCTTGCTAGAGTATAGT............. 20 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
..................................................TGAGTAATACAATTTTCTCATACTGA.............................................................................. 26 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCTGTT............................... 28 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................TTTTCTTGCTAGAGTA................. 16 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................TTTTCCCATACTGAGTCCGTCCGGAAG................................................................. 27 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................AACAAGCATTTCTTCTGTTTTCTTGC........................ 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
....................................................AGTAATACAATTTTCCCATACTGA.............................................................................. 24 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
...................................................GAGTAATACAATTTTCCCATACTGAGTA........................................................................... 28 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
....................................................AGTAATACAATTTTCCCATACTG............................................................................... 23 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
......................................................................................................................TCTTTTTCTTGCTAGAGTATAG.............. 22 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................CGTCCGGAAGGTTGTGTA......................................................... 18 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...................................................GAGGAATACAATTTTCCCATACTGAGTC........................................................................... 28 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
..........CTCTAGCGAGTGACATTAAATCGCT....................................................................................................................... 25 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
........TGCTCTAGCGAGTGACATTAAATCGCT....................................................................................................................... 27 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
...........TCTAGCGAGTGACATTAAA............................................................................................................................ 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TTGTGTAGCTCTCTAACAAGC........................................... 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...................................................GATTAATACAATTTTCCCATACTGA.............................................................................. 25 1 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
............................................................................................GTGTAGCTCTCTAACAAGCA.......................................... 20 0 5 0.20 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................TGTGTAGCTCTCTAACAAGCATTT....................................... 24 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCTG................................. 26 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
.........TCTCTAGCGAGTGACATTAAACCGCT....................................................................................................................... 26 1 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................TTCTTGCTAGAGTATAG.............. 17 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...................................................GAGTAATACAATTTTCCCATACTG............................................................................... 24 0 5 0.20 1 0 0 0 0 0 0 1 0 0 0 0
...........TCTAGCGAGTGACATTAAAT........................................................................................................................... 20 0 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAAACCTCAAGCGACTATACTCTAGCAAGAAAACAGAAGAAATGCTTGTTAGAGAGCTACACAACCTTCCGGACGGACTCAGTATGGGAAAATTGTATTACTCAGCCGCTAAAATAAGAAGCGATTTAATGTCACTCGCTAGAGAAGCCGACCC
************************************.......(((.......((((.((((((((((((..((.......))...)))))))))))).)))))))............************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Ovary		 SRR553485
Ovary		 SRR618934
Ovary		 SRR553487
Ovary		 SRR553488
Ovary		 M025
embryo
 M053
Female-body
.............................................................................................TGTATTACTCAGCCGCTAAAATAAGA................................... 26 0 5 107.60 538 483 42 0 2 9 0 2
..............................................................................................GTATTACTCAGCCGCTAAAATAAGA................................... 25 0 5 100.20 501 303 148 0 34 16 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGCCGA... 27 0 4 75.50 302 112 69 9 57 53 0 2
.........................................................TACACAACCTTCCGGACGGACTCAGT....................................................................... 26 0 4 42.00 168 14 39 9 10 2 90 4
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCCGA... 25 0 4 22.25 89 23 19 10 18 18 0 1
.............................................................................................................................TTAATGTCACTCGCTAGAGAAGCCGA... 26 0 4 20.50 82 22 28 4 20 8 0 0
...............................AACAGAAGAAATGCTTGTTAGAGAGC................................................................................................. 26 0 5 18.20 91 1 1 75 0 0 0 14
.........................................................TACACAACCTTCCGGACGGACTCAGTA...................................................................... 27 0 4 17.50 70 6 24 15 6 4 3 12
...............................AACAGAAGAAATGCTTGTTAGAGAG.................................................................................................. 25 0 5 13.60 68 0 1 66 0 0 0 1
.........................................................TACACAACCTTCCGGACGGACTCAG........................................................................ 25 0 4 8.75 35 2 14 4 11 2 0 2
.................................................TAGAGAGCTACACAACCTTCCGGACGG.............................................................................. 27 0 3 7.67 23 18 3 0 1 1 0 0
.......................................................GCTACACAACCTTCCGGACGGACTCAGTA...................................................................... 29 0 3 6.33 19 7 7 0 5 0 0 0
...............................AACAGAAGAAATGCTTGTTAGAGA................................................................................................... 24 0 6 6.17 37 3 11 12 4 5 0 2
..............................................TGTTAGAGAGCTACACAACCTTCCGGA................................................................................. 27 0 3 5.67 17 7 4 0 3 3 0 0
.........................................................TACACAACCTTCCGGACGGACTCAGTATG.................................................................... 29 0 4 4.75 19 2 6 0 3 0 5 3
................................................TTAGAGAGCTACACAACCTTCCGGACGG.............................................................................. 28 0 3 3.33 10 9 1 0 0 0 0 0
.......................................................................................................................AGCGATTTAATGTCACTCGCTAGA........... 24 0 5 3.20 16 2 2 0 4 8 0 0
.................................................TAGAGAGCTACACAACCTTCCGGACGGAC............................................................................ 29 0 3 3.00 9 6 1 0 0 1 0 1
.........................................................TACACAACCTTCCGGACGGACTCAGG....................................................................... 26 1 4 3.00 12 0 0 0 0 0 12 0
.........AGCGACTATACTCTAGCAAGAAAACAGA..................................................................................................................... 28 0 4 2.50 10 7 1 0 1 1 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGC...... 24 0 5 2.40 12 4 1 4 1 0 0 2
.........................................................TACACAACCTTCCGGACGGACTCAGTAT..................................................................... 28 0 4 2.25 9 1 3 0 3 1 0 1
...............................AACAGAAGAAATGCTTGTTAGAG.................................................................................................... 23 0 6 2.17 13 0 2 11 0 0 0 0
...............................AACAGAAGAAATGCT............................................................................................................ 15 0 8 2.13 17 0 0 17 0 0 0 0
..............................................TGTTAGAGAGCTACACAACCTTCCGGAC................................................................................ 28 0 3 2.00 6 3 1 0 1 1 0 0
..................................................AGAGAGCTACACAACCTTCCGGACGGAC............................................................................ 28 0 3 1.67 5 2 0 0 1 0 0 2
...................................................................TCCGGACGGACTCAGTATGGGAAAAT............................................................. 26 0 5 1.60 8 1 1 3 2 1 0 0
............................................................................................TTGTATTACTCAGCCGCTAAAATAAGA................................... 27 0 5 1.60 8 6 1 0 1 0 0 0
...............................AACAGAAGAAATGCTTGT......................................................................................................... 18 0 7 1.57 11 0 0 11 0 0 0 0
......................TAGCAAGAAAACAGAAGAAATGCT............................................................................................................ 24 0 6 1.50 9 0 0 9 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAATAAG.................................... 25 0 5 1.40 7 6 0 0 0 0 1 0
...............................AACAGAAGAAATGCTTGTTAGAGAGT................................................................................................. 26 1 5 1.40 7 0 1 3 3 0 0 0
.......................................................GCTACACAACCTTCCGGACGGACTCAGT....................................................................... 28 0 3 1.33 4 0 2 0 1 1 0 0
..............................................TATTAGAGAGCTACACAACCTTCCGGACGG.............................................................................. 30 1 3 1.33 4 4 0 0 0 0 0 0
.......................................................GCTACACAACCTTCCGGACGGACTC.......................................................................... 25 0 3 1.33 4 2 0 0 2 0 0 0
..................................................AGAGAGCTACACAACCTTCCGGACGG.............................................................................. 26 0 3 1.33 4 2 1 0 1 0 0 0
.........................................................TACACAACCTTCCGGACGGACTCAGC....................................................................... 26 1 4 1.25 5 0 0 0 0 0 5 0
.........................................................TACACAACCTTCCGGACGGACTCAGTATGG................................................................... 30 0 4 1.25 5 2 3 0 0 0 0 0
...ACCTCAAGCGACTATACTCTAGC................................................................................................................................ 23 0 4 1.25 5 5 0 0 0 0 0 0
...............................................................ACCTTCCGGACGGACTCAGTATGGGA................................................................. 26 0 4 1.25 5 1 1 0 3 0 0 0
.............................................................................................................................TTAATGTCACTCGCTAGAGAAGCCGACC. 28 0 4 1.25 5 0 0 1 2 0 0 2
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCCGACC. 27 0 4 1.25 5 0 0 4 0 1 0 0
...................................GAAGAAATGCTTGTTAGAGAG.................................................................................................. 21 0 5 1.20 6 0 0 6 0 0 0 0
................................................TTAGAGAGCTACACAACCTTCCGGAC................................................................................ 26 0 3 1.00 3 3 0 0 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAATAAGT................................... 26 1 5 1.00 5 5 0 0 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAA........ 22 0 5 1.00 5 2 1 2 0 0 0 0
.............................................................CAACCTTCCGGACGGACTCAGTATGGGA................................................................. 28 0 4 1.00 4 1 3 0 0 0 0 0
................................................TTAGAGAGCTACACAACCTTCCGGACGGA............................................................................. 29 0 3 1.00 3 3 0 0 0 0 0 0
.................................................TAGAGAGCTACACAACCTTCCGGACGGACT........................................................................... 30 0 3 1.00 3 2 1 0 0 0 0 0
..............................................TATTAGAGAGCTACACAACCTTCCGGA................................................................................. 27 1 3 1.00 3 3 0 0 0 0 0 0
.....................................AGAAATGCTTGTTAGAGAGC................................................................................................. 20 0 5 1.00 5 0 0 5 0 0 0 0
...ACCTCAAGCGACTATACTCTAGCAAG............................................................................................................................. 26 0 4 1.00 4 4 0 0 0 0 0 0
.............................................TTGTTAGAGAGCTACACAACCTTCCGGAC................................................................................ 29 0 3 1.00 3 2 0 0 0 1 0 0
.................................................TAGAGAGCTACACAACCTTCCGGACGGA............................................................................. 28 0 3 1.00 3 2 1 0 0 0 0 0
..............................................TGTTAGAGAGCTACACAACCTTCCGGACGG.............................................................................. 30 0 3 1.00 3 2 0 0 0 1 0 0
...............................AACAGAAGAAATGCTTGTTAGA..................................................................................................... 22 0 6 0.83 5 0 1 3 1 0 0 0
..............................................................................................GGATTACTCAGCCGCTAAAATAAGA................................... 25 1 5 0.80 4 1 3 0 0 0 0 0
...................................................................TCCGGACGGACTCAGTATGGGAAAATT............................................................ 27 0 5 0.80 4 0 2 0 0 2 0 0
...............................AACAGAAGAAATGCTTGTTAGAGAGCT................................................................................................ 27 0 5 0.80 4 2 0 2 0 0 0 0
..............................................................................................GTATTACTCAGCCGCTAAAATAAGAA.................................. 26 0 5 0.80 4 1 1 0 2 0 0 0
..................................................................TTCCGGACGGACTCAGTATGGGAAAAT............................................................. 27 0 5 0.80 4 0 1 2 1 0 0 0
....................TCTAGCAAGAAAACAGAAGAAATGCT............................................................................................................ 26 0 4 0.75 3 0 0 1 0 2 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGCCGACC. 29 0 4 0.75 3 1 1 1 0 0 0 0
............................................................ACAACCTTCCGGACGGACTCAGTATGG................................................................... 27 0 4 0.75 3 0 1 0 0 2 0 0
.........................................................TACACAACCTTCCGGACGGACTCA......................................................................... 24 0 4 0.75 3 0 0 3 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCCGT... 25 1 4 0.75 3 1 2 0 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCCGAC.. 26 0 4 0.75 3 0 0 2 0 0 0 1
.........................................................TACACAACCTTCCGGACGGACT........................................................................... 22 0 4 0.75 3 0 0 2 0 0 1 0
....................................................................................TGGGAAAATTGTATTACTCAGCCGC............................................. 25 0 4 0.75 3 0 0 1 0 1 0 1
...............................AACAGAAGAAATGCTTGTTAG...................................................................................................... 21 0 6 0.67 4 0 0 4 0 0 0 0
.......................................................GCTACACAACCTTCCGGACGGACTCAG........................................................................ 27 0 3 0.67 2 1 1 0 0 0 0 0
.............................................TTGTTAGAGAGCTACACAACCTTCCGGA................................................................................. 28 0 3 0.67 2 1 1 0 0 0 0 0
.................................................TAGAGAGCTACACAACCTTCCGGAC................................................................................ 25 0 3 0.67 2 0 0 1 0 1 0 0
................................................TTAGAGAGCTACACAACCTTCCGGACGGAC............................................................................ 30 0 3 0.67 2 1 1 0 0 0 0 0
..........................................TGCTTGTTAGAGAGCTACACAACCTTC..................................................................................... 27 0 3 0.67 2 0 0 2 0 0 0 0
.......................AGCAAGAAAACAGAAGAAATGCTTGT......................................................................................................... 26 0 6 0.67 4 0 0 4 0 0 0 0
..................................................................TTCCGGACGGACTCAGTATGGGAA................................................................ 24 0 6 0.67 4 1 3 0 0 0 0 0
..................................................................TTCCGGACGGACTCAGTATGGGAAA............................................................... 25 0 6 0.67 4 0 1 1 0 2 0 0
...................................................................TCCGGACGGACTCAGTATGGGA................................................................. 22 0 6 0.67 4 3 1 0 0 0 0 0
.............................................TTATTAGAGAGCTACACAACCTTCCGGA................................................................................. 28 1 3 0.67 2 2 0 0 0 0 0 0
..............................................................................................GTATTACTCAGCCGCTAAAATAAG.................................... 24 0 5 0.60 3 1 0 0 0 2 0 0
.............................................................................................TTTATTACTCAGCCGCTAAAATAAGA................................... 26 1 5 0.60 3 2 1 0 0 0 0 0
..................................................................................................................TAAGAAGCGATTTAATGTCACTCGCTAGA........... 29 0 5 0.60 3 1 0 0 2 0 0 0
...............................................................................................TATTACTCAGCCGCTAAAATAAGA................................... 24 0 5 0.60 3 1 1 0 1 0 0 0
.............................................................................................................................TTAATGTCACTCGCTAGAGA......... 20 0 5 0.60 3 0 0 3 0 0 0 0
....................................................................CCGGACGGACTCAGTATGGGAAAATT............................................................ 26 0 5 0.60 3 1 1 0 1 0 0 0
...............................AACAGAAGAAATGCTTGTTA....................................................................................................... 20 0 6 0.50 3 0 0 3 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGCCG.... 26 0 4 0.50 2 0 0 2 0 0 0 0
......TCAAGCGACTATACTCTAGCAAGA............................................................................................................................ 24 0 4 0.50 2 1 0 0 1 0 0 0
........................................AATGCTTGTTAGAGAGCTACACAACC........................................................................................ 26 0 4 0.50 2 0 0 2 0 0 0 0
.............................................................CAACCTTCCGGACGGACTCAGTATG.................................................................... 25 0 4 0.50 2 1 0 1 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCCGACCC 28 0 4 0.50 2 0 0 0 0 1 0 1
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGCCGC... 27 1 4 0.50 2 0 0 0 1 1 0 0
..................................................................TTCCGGACGGACTCAGTATGGGA................................................................. 23 0 6 0.50 3 2 1 0 0 0 0 0
....................................................................CCGGACGGACTCAGTATGGGAAA............................................................... 23 0 6 0.50 3 0 2 0 1 0 0 0
........................................AATGCTTGTTAGAGAGC................................................................................................. 17 0 6 0.50 3 0 0 3 0 0 0 0
...............................................................ACCTTCCGGACGGACTCAGT....................................................................... 20 0 4 0.50 2 0 0 0 0 0 2 0
...............................AACAGAAGAAATGCTT........................................................................................................... 16 0 8 0.50 4 0 0 4 0 0 0 0
............................................................................ACTCAGTATGGGAAAAT............................................................. 17 0 6 0.50 3 0 0 3 0 0 0 0
..............................................................AACCTTCCGGACGGACTCAGTATGGGA................................................................. 27 0 4 0.50 2 0 1 0 0 0 1 0
...ACCTCAAGCGACTATACTCTAGCA............................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0 0
...............................AACAGAAGAAATGCTTGTT........................................................................................................ 19 0 6 0.50 3 0 0 3 0 0 0 0
.........................................................TACACAACCTTCCGGACGGACTCAGTATGGGA................................................................. 32 0 4 0.50 2 0 2 0 0 0 0 0
..............................................................................................GTATTACTCAGCCGCTAAAATAAGGA.................................. 26 1 6 0.50 3 0 3 0 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCC..... 23 0 4 0.50 2 0 0 2 0 0 0 0
...................................GAAGAAATGCTTGTTAGAG.................................................................................................... 19 0 6 0.50 3 0 0 3 0 0 0 0
.............................................................................................................TAAAATAAGAAGCGATTTAATGTCACT.................. 27 0 6 0.50 3 2 0 0 1 0 0 0
..................................................................................................................................GTCACTCGCTAGAGA......... 15 0 5 0.40 2 0 0 2 0 0 0 0
..................................................................TTCCGGACGGACTCAGTATGGGAAAA.............................................................. 26 0 5 0.40 2 1 0 1 0 0 0 0
...................................................................TCCGGACGGACTCAGTATGGGAAAA.............................................................. 25 0 5 0.40 2 0 0 1 1 0 0 0
...................................................................TCCGGACGGACTCAGTATGGGAAAAA............................................................. 26 1 5 0.40 2 1 1 0 0 0 0 0
..........................................................................................................................GATTTAATGTCACTCGCTAGA........... 21 0 5 0.40 2 0 0 2 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGA......... 21 0 5 0.40 2 0 0 0 2 0 0 0
....................................................................CCGGACGGACTCAGTATGGGAAAA.............................................................. 24 0 5 0.40 2 1 0 0 0 1 0 0
...................................GAAGAAATGCTTGTTAGAGAGC................................................................................................. 22 0 5 0.40 2 0 0 2 0 0 0 0
....................................................................CCGGACGGACTCAGTATTGGAAAAT............................................................. 25 1 5 0.40 2 1 1 0 0 0 0 0
...............TATACTCTAGCAAGAAAACAGA..................................................................................................................... 22 0 5 0.40 2 1 0 0 1 0 0 0
................................................................................AGTATGGGAAAATTGTATTACTCAGC................................................ 26 0 5 0.40 2 0 0 1 0 0 1 0
.............................................................................................TGTATTACTCAGCCGCTAAAATAA..................................... 24 0 5 0.40 2 2 0 0 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAAGA...................................... 23 1 5 0.40 2 1 1 0 0 0 0 0
..................................AGAAGAAATGCTTGTTAGAGAGC................................................................................................. 23 0 5 0.40 2 0 0 2 0 0 0 0
..........................................TGCTTGTTAGAGAGCTA............................................................................................... 17 0 6 0.33 2 0 0 2 0 0 0 0
........................................................................................................GCCGCTAAAATAAGA................................... 15 0 6 0.33 2 2 0 0 0 0 0 0
.....................................................GAGCTACACAACCTTCCGGACGGACT........................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................TCCGGACGGACTCAGTATGGGAAA............................................................... 24 0 6 0.33 2 0 0 0 1 1 0 0
................................ACAGAAGAAATGCTTGTTAGAGA................................................................................................... 23 0 6 0.33 2 1 0 0 0 0 0 1
.......................................................................................GAAAATTGTATTACTCAGCCGCTAAAA........................................ 27 0 3 0.33 1 0 0 0 1 0 0 0
.......................................AAATGCTTGTTAGAGAGC................................................................................................. 18 0 6 0.33 2 0 0 2 0 0 0 0
...............................AACAGAAGAAATGCTTGTTAGAGAT.................................................................................................. 25 1 6 0.33 2 0 1 1 0 0 0 0
......................TAGCAAGAAAACAGAAGAAATGCTTG.......................................................................................................... 26 0 6 0.33 2 0 0 2 0 0 0 0
.................................................TAGAGAGCTACACAACCGTCCGGACGGAC............................................................................ 29 1 3 0.33 1 0 1 0 0 0 0 0
...............................................................ACCTTCCGGACGGACTCAGTATGGGAAAAT............................................................. 30 0 3 0.33 1 0 0 0 1 0 0 0
.................................................................CTTCCGGACGGACTCAGTATGGGA................................................................. 24 0 6 0.33 2 1 1 0 0 0 0 0
.......................................................GCTACACAACCTTCCGGACGGACT........................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
.................................................TAGAGAGCTACATAACCTTCCGGAC................................................................................ 25 1 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAGTAAGA................................... 26 1 6 0.33 2 1 1 0 0 0 0 0
................................................TTAGAGAGCTACACAACCTTCCGGA................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0
..............................................TGTTAGAGAGCTACACAACCTTCCGG.................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0
...............................................GTTAGAGAGCTACACAACCTTCCGGA................................................................................. 26 0 3 0.33 1 0 0 0 0 1 0 0
...................................................................................................................................TCACTCGCTCCAGAAGCCGA... 20 2 6 0.33 2 0 0 0 2 0 0 0
........................................................CTACACAACCTTCCGGACGGACTCAGT....................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................CTTCCGGACGGACTCAGT....................................................................... 18 0 7 0.29 2 0 0 2 0 0 0 0
...............................AACAGAAGAAATGCTTG.......................................................................................................... 17 0 7 0.29 2 0 0 2 0 0 0 0
......................................GAAATGCTTGTTAGAGAG.................................................................................................. 18 0 7 0.29 2 0 0 2 0 0 0 0
..................................AGAAGAAATGCTTGTT........................................................................................................ 16 0 7 0.29 2 0 0 2 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCCGC... 25 1 4 0.25 1 0 0 0 1 0 0 0
...............................................................................................................................AATGTCACTCGCTAGAGAAGCC..... 22 0 4 0.25 1 0 0 1 0 0 0 0
...ACCTCAAGCGACTATACTCTAGCAAGA............................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0 0
.........................................................AACACAACCTTCCGGACGGACTCAGT....................................................................... 26 1 4 0.25 1 1 0 0 0 0 0 0
.............................................................................................................................TTAATGTCACTTGCTAGAGAAGCCGA... 26 1 4 0.25 1 0 0 0 1 0 0 0
.............................................................................................................................TTAATGTCACTCGCTAGATAAGCCGAC.. 27 1 4 0.25 1 0 0 0 0 0 0 1
.........................................................AACACAACCTTCCGGACGGACTCAG........................................................................ 25 1 4 0.25 1 0 1 0 0 0 0 0
.......................................................................................GAAAATTGTATTACTCAGCCGCTAAA......................................... 26 0 4 0.25 1 0 1 0 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGCCGT... 27 1 4 0.25 1 1 0 0 0 0 0 0
...............................................................ACCTTCCGGACGGACTCAGTA...................................................................... 21 0 4 0.25 1 0 0 0 0 0 1 0
............................................................CCAACCTTCCGGACGGACTCAGTATGGGAA................................................................ 30 1 4 0.25 1 0 1 0 0 0 0 0
.........................................................TGCACAACCTTCCGGACGGACTCAGT....................................................................... 26 1 4 0.25 1 0 0 1 0 0 0 0
..............................................................AACCTTCCGGACGGACTCAGTATGGGAAA............................................................... 29 0 4 0.25 1 0 0 0 1 0 0 0
...........................ACCAAACATAAGAAATGCTTGTTAGAGAGC................................................................................................. 30 3 4 0.25 1 0 0 1 0 0 0 0
.....CTCAAGCGACTATACTCTAGCA............................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0 0
............................................................................................................................TGTAATGTCACTCGCTAGAGAAGCCGA... 27 1 4 0.25 1 0 1 0 0 0 0 0
..................ACTCTAGCAAGAAAACAGAAGA.................................................................................................................. 22 0 4 0.25 1 1 0 0 0 0 0 0
................................................TTAGAGAGCTACACAAC......................................................................................... 17 0 4 0.25 1 0 0 1 0 0 0 0
...............TATACTCTAGCAAGAAAACAGAAGA.................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0
..........................................TGCTTGTTAGAGAGCTACACAACCTT...................................................................................... 26 0 4 0.25 1 0 0 0 0 0 0 1
...............................................................................................................................AATGTCACTCGCTAGAGAAGCCGACC. 26 0 4 0.25 1 0 0 1 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGCC..... 25 0 4 0.25 1 0 0 0 0 0 0 1
.............................................................................................................................GTAATGTCACTCGCTAGAGAAGCCGA... 26 1 4 0.25 1 1 0 0 0 0 0 0
...............................................................ACCTTCCGGACGGACTCAGTATGGGAAA............................................................... 28 0 4 0.25 1 0 1 0 0 0 0 0
..............................................................................................................................TAATGTCACTCGTTAGAGAAGCCGA... 25 1 4 0.25 1 1 0 0 0 0 0 0
............................................................................................................................TCTAATGTCACTCGCTAGAGAAGCCGA... 27 1 4 0.25 1 0 0 0 0 1 0 0
..........................AAGAAAACAGAAGAAA................................................................................................................ 16 0 8 0.25 2 0 0 2 0 0 0 0
..........................................................ACACAACCTTCCGGACGGACTCAGT....................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0
......................................................................................................................................CTCGCTAGAGAAGCCGA... 17 0 4 0.25 1 0 0 1 0 0 0 0
............................................................ACAACCTTCCGGACGGACTCAGTATGGGAT................................................................ 30 1 4 0.25 1 0 1 0 0 0 0 0
.......................................................................................GAAAATTGTATTACTCAGCCGCAAAAAA....................................... 28 2 4 0.25 1 0 0 0 1 0 0 0
.........................................................TACACAACCTTCCTGACGGACTCAGT....................................................................... 26 1 4 0.25 1 0 0 0 0 0 1 0
..........................................TGCTTGTTAGAGAGCTACACAACC........................................................................................ 24 0 4 0.25 1 0 0 1 0 0 0 0
.............................................................CAACCTTCCGGACGGACTCGGTATG.................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0
.........................................................TACACAACCTTCCGAACGGACTCAGTA...................................................................... 27 1 4 0.25 1 1 0 0 0 0 0 0
...........................................................CACAACCTTCCGGACGGACTCAGT....................................................................... 24 0 4 0.25 1 0 0 0 0 0 1 0
...............TATACTCTAGCAAGAAAACAGAAGAAA................................................................................................................ 27 0 4 0.25 1 0 0 0 0 1 0 0
..................................................................................................................................GTCACTCGCTAGAGAAGCCGA... 21 0 4 0.25 1 0 0 1 0 0 0 0
.........................................................TGCACAACCTTCCGGACGGAC............................................................................ 21 1 4 0.25 1 0 0 1 0 0 0 0
............................................................................................................................TTTAATGTCATTCGCTAGAGAAGCCGA... 27 1 4 0.25 1 0 1 0 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGCCGAC.. 28 0 4 0.25 1 0 0 0 0 0 0 1
.........AGCGACTATACTCTAGC................................................................................................................................ 17 0 4 0.25 1 1 0 0 0 0 0 0
.................................................................................................................................TGTCACTCGCTAGAGAAGCCGA... 22 0 4 0.25 1 1 0 0 0 0 0 0
...ACCTCAAGCGACTATACTCTAGCAA.............................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................................................................TCGCTAGAGAAGCCG.... 15 0 4 0.25 1 0 0 1 0 0 0 0
................................................................CCTTCCGGACGGACTCAGTATGGGAA................................................................ 26 0 4 0.25 1 0 0 0 0 1 0 0
.........................................................TACACCACCTTCCGGACGGACT........................................................................... 22 1 4 0.25 1 0 0 1 0 0 0 0
............GACTATACTCTAGCAAGAAAACAGA..................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
............................................................................................................................TTTAAAGTCACTCGCTAGAGAAGCCGA... 27 1 4 0.25 1 0 1 0 0 0 0 0
................................ACAGAAGAAATGCTTGTTAGAGAG.................................................................................................. 24 0 5 0.20 1 0 0 0 1 0 0 0
.....................................AGAAATGCTTGTTAGAGAGT................................................................................................. 20 1 5 0.20 1 0 0 1 0 0 0 0
..............................................................................................GTATTACTCCGCCGCTAAAATAAGA................................... 25 1 5 0.20 1 0 1 0 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGA........... 19 0 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................GTATTACTCAGCCGCTAAAACAAGA................................... 25 1 5 0.20 1 0 1 0 0 0 0 0
................................................................................AGTATGGGAAAATTGTATTA...................................................... 20 0 5 0.20 1 0 0 1 0 0 0 0
...........................................................................................................................ATTTAATGTCACTCGCTAGAGAAGC...... 25 0 5 0.20 1 0 0 1 0 0 0 0
..................................................................TTCCGGACGGACTCAGTATGGGAAAATT............................................................ 28 0 5 0.20 1 0 0 0 1 0 0 0
..................................................................................................................................GTCACTCGCTCCAGAAGCCGA... 21 2 5 0.20 1 0 0 0 1 0 0 0
.............................................................................................TGTATTATTCAGCCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................TGTATTACTCAGTCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
.............................AAAACAGGAGAAATGCTTGTTAGAGA................................................................................................... 26 1 5 0.20 1 0 0 0 0 1 0 0
.............................................................................................TGTATTACTCCGCCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
................................ACAGAAGAAATGCTTGTTAGAGAGCA................................................................................................ 26 1 5 0.20 1 0 0 1 0 0 0 0
..................................................................................TATGGGAAAATTGTATTACTCAGC................................................ 24 0 5 0.20 1 0 0 1 0 0 0 0
..............................................................................................GTATTACTCAGCCGCTAGAATAAGA................................... 25 1 5 0.20 1 1 0 0 0 0 0 0
.............ACTATACTCTAGCAAGAAAACAGA..................................................................................................................... 24 0 5 0.20 1 0 1 0 0 0 0 0
...........................................................................GACTCAGTATGGGAAAATTGTATTACT.................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................GGTATTACTCAGCCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
...............................AGCAGAAGAAATGCTTGTTAGAGAG.................................................................................................. 25 1 5 0.20 1 0 0 1 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGT........... 19 1 5 0.20 1 0 0 0 1 0 0 0
..............................................................................................GTATTACCCAGCCGCTAAAATAAGA................................... 25 1 5 0.20 1 0 1 0 0 0 0 0
.............................................................................CTCAGTATGGGAAAATTGTATTACTCAG................................................. 28 0 5 0.20 1 0 0 1 0 0 0 0
............................................................................ACTCAGTATGGGAAAATTGTATTACTC................................................... 27 0 5 0.20 1 0 0 0 1 0 0 0
....................................AAGAAATGCTTGTTAGAGAG.................................................................................................. 20 0 5 0.20 1 0 0 1 0 0 0 0
.........................................................TACACAACCTTCCGGACGGA............................................................................. 20 0 5 0.20 1 0 0 1 0 0 0 0
...........................................................CACAACCTTCCGGACGGA............................................................................. 18 0 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................AGTATTACTCAGCCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................TTATTACTCAGCCGCTAAAATAAGA................................... 25 1 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................................................TTAATGTCACTCGCTAGAGAA........ 21 0 5 0.20 1 0 0 1 0 0 0 0
..............................................................................TCAGTATGGGAAAATTGTATTA...................................................... 22 0 5 0.20 1 0 0 0 0 1 0 0
............................................................................................TTGTATTACTCAGCCGCTAAAATAGGA................................... 27 1 5 0.20 1 0 1 0 0 0 0 0
..........................AAGAAAACAGAAGAAATGCTTGTT........................................................................................................ 24 0 5 0.20 1 0 0 1 0 0 0 0
.......................AGCAAGAAAACAGAAGAAATGCTTGTT........................................................................................................ 27 0 5 0.20 1 0 0 1 0 0 0 0
..................................................................TACCGGACGGACTCAGTATGGGAAAAT............................................................. 27 1 5 0.20 1 0 0 1 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAATGAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
..............................................................................TCAGTATGGGAAAATTGTATTACTCAGC................................................ 28 0 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAA........ 20 0 5 0.20 1 0 1 0 0 0 0 0
..................................................................TTCCGGACGGGCTCAGTATGGGAAAAT............................................................. 27 1 5 0.20 1 0 0 0 1 0 0 0
.............................................................................................TGGATTACTCAGCCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................GTATTACTCAGCCGCTAAAATGAGA................................... 25 1 5 0.20 1 0 0 0 1 0 0 0
...............................AACAGAAGAAATGCTTGCTAGAGAG.................................................................................................. 25 1 5 0.20 1 0 0 1 0 0 0 0
...............................................................................CAGTATGGGAAAATTGTATTACTC................................................... 24 0 5 0.20 1 0 0 0 0 1 0 0
.......................................................................................................................AGCGATTTAATGTCACTCGCTAGAGAA........ 27 0 5 0.20 1 0 0 0 0 1 0 0
................................ACAGAAGAAATGCTTGTTAGAGAGC................................................................................................. 25 0 5 0.20 1 0 0 0 0 0 0 1
..............................................................................................................................TAATGTCACTCGCTAGAGAAGCGGA... 25 1 5 0.20 1 1 0 0 0 0 0 0
....................................................................CCGGACGGACGCAGTATGGGAAAAT............................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0
...............................AACAGAAGAAATGCTTGTTAGGGAG.................................................................................................. 25 1 5 0.20 1 0 0 1 0 0 0 0
....................................................................CCGGACGGACTCAGTATGGGAAAAT............................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0
.................................................................................................TTACTCAGCCGCTAAAATAAGA................................... 22 0 5 0.20 1 1 0 0 0 0 0 0
..................................AGAAGAAATGCTTGTTAGAGAG.................................................................................................. 22 0 5 0.20 1 0 0 1 0 0 0 0
....................................................................CCGGACGGACTCAGTATGGGAAAATTG........................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAAG....... 21 0 5 0.20 1 0 0 1 0 0 0 0
..............................................................................................................................TAATGTCACTCGCTAGAGAAGC...... 22 0 5 0.20 1 0 0 1 0 0 0 0
..........................AAGAAAACAGAAGAAATGCTTGTTAGA..................................................................................................... 27 0 5 0.20 1 0 1 0 0 0 0 0
.............................................................................................TGTATTACTCGGCCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................GTATTACTCAGCTGCTAAAATAAGA................................... 25 1 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................TGTATTACTCAGCCCCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
...............................AACAGAAGAAATGCTTGTTAGAGAGCA................................................................................................ 27 1 5 0.20 1 0 0 1 0 0 0 0
...............................AACCGAAGAAATGCTTGTTAGAGAG.................................................................................................. 25 1 5 0.20 1 0 0 1 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAATAAGAA.................................. 27 0 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................TTGATTACTCAGCCGCTAAAATAAGA................................... 26 2 5 0.20 1 1 0 0 0 0 0 0
....................................................................CCGGACGGACTCAGTATGGGAAAATTGT.......................................................... 28 0 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................TGTGTTACTCAGCCGCTAAAATAAGA................................... 26 1 5 0.20 1 1 0 0 0 0 0 0
............................................................................................................................TTTAATGTCACTCGCTAGAGAAGA...... 24 1 5 0.20 1 0 1 0 0 0 0 0
...............................AACAGAAGAAATGCTTGTTAGAGAGCTA............................................................................................... 28 0 5 0.20 1 0 0 1 0 0 0 0
........................GCAAGAAAACAGAAGAAA................................................................................................................ 18 0 6 0.17 1 0 0 1 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAATAAAG................................... 26 2 6 0.17 1 1 0 0 0 0 0 0
...................................GAAGAAATGCTTGTTAGA..................................................................................................... 18 0 6 0.17 1 0 0 1 0 0 0 0
...........................................................................GACTCAGTATGGGAAAAT............................................................. 18 0 6 0.17 1 0 0 1 0 0 0 0
.........................................ATGCTTGTTAGAGAGCTA............................................................................................... 18 0 6 0.17 1 0 0 1 0 0 0 0
.......................AGCAAGAAAACAGAAGAAATGCTTG.......................................................................................................... 25 0 6 0.17 1 0 0 1 0 0 0 0
.............................................................................................................TAAAATAAGAAGCGATTTAATGTCA.................... 25 0 6 0.17 1 1 0 0 0 0 0 0
......................TGGCAAGAAAACAGAAGAAATGCT............................................................................................................ 24 1 6 0.17 1 0 0 1 0 0 0 0
...............................AACAGAAGAAATGCTTGATAGAGA................................................................................................... 24 1 6 0.17 1 0 1 0 0 0 0 0
....................................................................CCGGACGGACTCAGTATGGGA................................................................. 21 0 6 0.17 1 1 0 0 0 0 0 0
.............................................................................CTCAGTATGGGAAAAT............................................................. 16 0 6 0.17 1 0 0 1 0 0 0 0
...................................GAAGAAATGCTTGTTAGAGA................................................................................................... 20 0 6 0.17 1 0 0 1 0 0 0 0
...............................ACCAGAAGAAATGCTTGTT........................................................................................................ 19 1 6 0.17 1 0 0 1 0 0 0 0
.............................................................................................TGTATTACTCAGCCGTTAAAATAAGA................................... 26 1 6 0.17 1 1 0 0 0 0 0 0
....................................................................CCGGACGGACTCAGTATGGGAA................................................................ 22 0 6 0.17 1 0 0 0 1 0 0 0
..................................................................TTCCGGACGGACTCAGTATGGGAACT.............................................................. 26 2 6 0.17 1 0 0 0 0 0 1 0
.............................................................................................TGTATTACTCAGCCGCTAA.......................................... 19 0 6 0.17 1 0 0 0 1 0 0 0
....................................................................................................................................CACTCGCTCCAGAAGCCGAAC. 21 3 6 0.17 1 0 0 0 1 0 0 0
..................................AGAAGAAATGCTTGTTAGAG.................................................................................................... 20 0 6 0.17 1 0 0 1 0 0 0 0
.................................................................CTTCCGGACGGACTCAGTATGGGAAA............................................................... 26 0 6 0.17 1 0 0 0 0 1 0 0
..................................................................................................................TAAGAAGCGATTTAATGTCACTCGCT.............. 26 0 6 0.17 1 0 0 1 0 0 0 0
......................TAGCAAGAAAACAGAAGAAA................................................................................................................ 20 0 6 0.17 1 0 0 1 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCT............................................ 17 0 6 0.17 1 0 0 1 0 0 0 0
......................TAGCAAGAAAACAGAAGAAATGC............................................................................................................. 23 0 6 0.17 1 0 0 0 1 0 0 0
...............................AACAGAAGAAATGCTTGTTAGAGT................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0
....................................................................CCGGACGGACTCAGAATGGGAAA............................................................... 23 1 6 0.17 1 1 0 0 0 0 0 0
.......................................AAATGCTTGTTAGAGAGCT................................................................................................ 19 0 6 0.17 1 0 0 1 0 0 0 0
..............................................................................................GTAATACTCAGCCGCTAAAATAAGA................................... 25 1 6 0.17 1 1 0 0 0 0 0 0
.........................CGAGAAAACAGAAGAAATGCTTGT......................................................................................................... 24 1 6 0.17 1 0 0 1 0 0 0 0
...............................AACAGAAGAAATTCTTGTTAGAG.................................................................................................... 23 1 6 0.17 1 0 0 1 0 0 0 0
.....................................AGAAATGCTTGTTAGAG.................................................................................................... 17 0 6 0.17 1 0 0 1 0 0 0 0
...................................................................TCCGGACGGACTCAGTATGGGAA................................................................ 23 0 6 0.17 1 1 0 0 0 0 0 0
...................................................................TCCGGACGGACTCAGTATGGGTA................................................................ 23 1 6 0.17 1 1 0 0 0 0 0 0
............................GAAAACAGAAGAAATGCT............................................................................................................ 18 0 6 0.17 1 0 0 1 0 0 0 0
..................................................................................................TACTCAGCCGCTAAAA........................................ 16 0 6 0.17 1 1 0 0 0 0 0 0
...............................AACAGAAGAAATGCTTGTTAT...................................................................................................... 21 1 6 0.17 1 0 0 1 0 0 0 0
.............................................................................................TGTATTACTCAGCCGCTAAAATAAGGA.................................. 27 1 6 0.17 1 0 1 0 0 0 0 0
..........................AAGAAAACAGAAGAAATGCTT........................................................................................................... 21 0 6 0.17 1 0 0 1 0 0 0 0
...................................................................TCCGGACGGACTCAGTATGGGATAT.............................................................. 25 2 6 0.17 1 0 0 0 0 1 0 0
........................................................................ACGGACTCAGTATGGGAA................................................................ 18 0 7 0.14 1 0 0 1 0 0 0 0
.................................................................CTTCCGGACGGACTCAGTA...................................................................... 19 0 7 0.14 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 chrU_M_6729:10144-10297 + dsi_76 GGGTCGGCTTCTCTAGCGAGTGACATTAAATCGCTTCTTATTTTAGCGGCTGAGTAATACAATTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTT
droSec2 scaffold_894:4545-4698 + GGGTCGGCTTCTCTAGCGAGTGACATTAAATCGCTTCTTATTTTAGCGGCTGAGTAATACAATTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCCTGCTAGAGTATAGTCGCTTGAGGTTTA
dm3 chr2R:1054486-1054639 + GGGTCGGCTTCTCTAGCGAGTGACATTAAATCGCTTCTTATTTTAGCGGCTGAGTAATACAATTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTA
droEre2 scaffold_4807:1637-1790 + GGGTCTGCTTCTCTGGCGAGTGACATTAGTTCGCTTCTTATTTTTGCGGTTGAGTAATATAATTTCCCCATAGTGAGTCCGTCCGGAAAATTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTG
droYak3 v2_chrUn_001:426050-426203 + GGGTCTGCTTCTCTGGCGAGTGACATTAGTTCGCTTCTTATTTTTGCGGTTGAGTAATATAATTTCCCCATAGTGAGTCCGTCCGGAAAATTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTG
droEug1 scf7180000409440:208085-208238 - GGGTCTGCTTCCCTGGCCAGGGACATTAATTCGCTTCTTATTTTAGTGGCTGAGTAATATAGTTTTCCCATACTGAGTCCATCCGGAAGGTTATGTAGCTCTCTAACAAGCATTTCTTCCGTT-TTTTTGCTAGAGTATAGTCGCTTGAGGTTTG
droBia1 scf7180000298126:29268-29422 + TGTTGTGCTTCTCTGGCCAGTGACATTAATTCACTTCTTATTTTCGTGACTCTGAATTATAATCTTCCCATACTGAGTCCATTCGGAAGATTGTGTAGCTCTCTAGCAAGCATTTCTTCTTTTTTTTTTGCTAGAGTTTAGTCGCTTGAGATTTG
droTak1 scf7180000414155:21712-21865 + GGGTCTGCTTCTCTGGCCAGTGACATTAATTCGCTTCTTATTTTCGTGGCCGTGTAATAAAGCTTTCCCATACTGAGTCCGTCCGGGAGATTGTGTAGCTCTCTTACTAGCATTTCGTCCGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTT
droEle1 scf7180000490952:435-588 - CGGTTCGAGTTTTTAGCCAATGATACCAGTTGGCCCCTCAACTTTGCTATTGAGAAAAATAGTTTATTGATAGAGAGTCCGCTTGGTAAGGTTTGAATTTCTCGGATTAATATAGCTTCCGTC-TTCTTGCAAGTGTAAAGTCGTTTAAGGTTTG
droRho1 scf7180000770805:1248-1401 + GGGTCTGCTTCTCTGGCCAGTGACATTAATTTACTTCTTATTTTCGTGGCTGATAAATATAGTTTTCCCATACTGAGTCCATCCGGAAGATTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTTGCTTGAGATTTG
droFic1 scf7180000452731:2931-3084 + GGGTCTGCTTCTCTGGCCAGTGACATTAATTCGCTTCTTATTTTCGTGGCTGTAAAATATAGTTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCAGTT-TTCTTGCTAGAGTATAGTCGCTTAAGATTTA
droKik1 scf7180000301695:3197-3350 - CGGTCCGAGTCTTTCATCAATGAAACCAATTGGCCTCTCAATTTTGCTATTGCAAAAAATAGTTTGTTAATGGAAAGTCCGCTTGGTAGGGTTTCAATTTCTCGGATTAATATAGCTTCTGTC-TTCTTGCAAGTATACAGTCGTTTAAGATTTG
droAna3 scaffold_13260:381648-381801 + GGGTCTGCTTCCCTGGCCAGGGACATTAATTCGCTTCTTATTTTAGTGGCTGTGTAATATAGTTTTCCCATACTGAGTCCATCCGGAAGGTTATGTAGCTCTCTAACAAGCATTTCTTCCGTT-TTTTTGCTAGAGTATAGTCGCTTGAGGTTTG
droBip1 scf7180000394388:5566-5719 - GGGTCTGCTTCTCTGGCCAGGGACATTAATTCGCTTCTTATTTTGGTGGCTGTGTAATATAGTTTTCCCATACTGGGTCCGTCCGGAAGATTATGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTTTTGCTAGAGTATAGTCGCTTGAGGTTTG
droPer2 scaffold_71:257694-257813 - ----------------------------------TTCTTAGGTTCGTAATTTCGAAGAAAAGTTTCCCCAACGGTAAGTTATTTGGTAGGTTTTAAATTTCTCGGATGATTATTGGTTCCGTC-TTTTTGCATACATACTTGCGTTTTAGGTTTA
droWil2 scf2_1100000004933:4240-4360 + ---------------------------------CTCCTTAGTTTCGTGATTTCAAAGAATAACTTGCCTAAGGGTAGATTATCCGGTAGAGTTTGTAATTCGTGAATAAGCATTGGTTCCGTT-TTTTTGCAATCGTAAATGCGTTTGAGATTTT
droMoj3 scaffold_6473:12017294-12017441 - GCGTTTCGTAATTTGTC------TGTTAATTGAGATCTTATTTTCAAAATACCATAAAAAAGTTGACCTAAAGATAAGTTATCAGAAAGGTTTTGCAAATCGTGAATAAGCATAGCTTCACTT-TTTTTGTTACCATAATGTTGAATCAGATTAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
GGGTCGGCTTCTCTAGCGAGTGACATTAAATCGCTTCTTATTTTAGCGGCTGAGTAATACAATTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTTSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.......................................................................................................................TGTT-TTCTTGCTAGAGTATAGTCGCT.........26440.751630002001417013342
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTC....................................................24337.671130102690281718257
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTC....................................................26320.0060000140036514108
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAGTA.................24415.006000004055218620
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGC............................................28310.33310000000512590
.....................................................................................................................TCTGTT-TTCTTGCTAGAGTATAGTCGCT.........2848.253300000005151120
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAA..............................................2638.00240000000094110
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAG.............................................2736.0018000000046170
...................................................GAGTAATACAATTTTCCCATACTGAGTC............................................................................2855.80290000002000009
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAAC................................................2835.3316000000162511
................................................................................................................TTTCTTCTGTT-TTCTTGCTAGAGTA.................2544.7519000000110584
...............................................................................CGTCCGGAAGGTTGTGTAGCTC......................................................2234.6714000200031242
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACA...............................................2534.6714000000043250
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTC......................................................2434.6714000100012244
...................................................GAGTAATACAATTTTCCCATACTGAG..............................................................................2654.00200000008000012
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGCA...........................................2934.0012000000029010
...............................................................TTTCCCATACTGAGTCCGTCCGGAAGGT................................................................2844.0016000100044610
..................................................TGAGTAATACAATTTTCCCATACTGA...............................................................................2653.8019000000054370
................................................................TTCCCATACTGAGTCCGTCCGGAAGGT................................................................2743.7515000100032630
..............................................................TTTTCCCATACTGAGTCCGTCCGGAAGGT................................................................2933.6711000000042320
.................................................................TCCCATACTGAGTCCGTCCGGAAGGT................................................................2643.2513000100032403
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTC......................................................2533.009000000020250
............................................................................GTCCGTCCGGAAGGTTGTGTAGCT.......................................................2432.337000000002230
...............................................................................CGTCCGGAAGGTTGTGTAGCTCT.....................................................2332.337000000011131
..................................................................CCCATACTGAGTCCGTCCGGAAGGT................................................................2542.259000000023211
..............................................................................CCGTCCGGAAGGTTGTGTAGCTCTC....................................................2532.006000300000120
.........................................................TACAATTTTCCCATACTGAGTCCGTC........................................................................2662.0012000000021342
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTCTC....................................................2732.006000000021111
...............................................................................CGTCCGGAAGGTTGTGTAGCT.......................................................2132.006000000003210
........TTCTCTAGCGAGTGACATTAAATCGC.........................................................................................................................2651.809000000201411
..........................................................................................................................T-TTCTTGCTAGAGTATAGTCGCT.........2341.757000000041200
...TCGGCTTCTCTAGCGAGTGACATTAAA.............................................................................................................................2741.757000000030220
...................................TCTTATTTTAGCGGCTGAGTAATACAAT............................................................................................2831.675000000020120
..................................TTCTTATTTTAGCGGCTGAGTAATACAA.............................................................................................2851.608000000002420
......................................................................TACTGAGTCCGTCCGGAAGGTTGTGT...........................................................2641.506000000020121
..........................................................................................................................T-TTCTTGCTAGAGTATAGTCGCTTGA......2641.506000000011121
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAGTATAGT.............2841.506000000110112
..................................................TGAGTAATACAATTTTCCCATACTGAGTC............................................................................2951.407000000131110
.........TCTCTAGCGAGTGACATTAAATCGC.........................................................................................................................2551.407000000020131
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTAGC........................................................2631.334000000022000
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCT.....................................................2531.334000000001111
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGCAT..........................................3031.334000000012100
...................................TCTTATTTTAGCGGCTGAGTAATACAATT...........................................................................................2931.334000000012100
.....................................TTATTTTAGCGGCTGAGTAATACAAT............................................................................................2631.334000000011110
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAA.................................................2731.334000000002110
...............................................................TTTCCCATACTGAGTCCGTCCGGAAGG.................................................................2741.255000000003110
......................................................................TACTGAGTCCGTCCGGAAGGTTGTG............................................................2541.255000000001013
...............................................................................................................................TTGCTAGAGTATAGTCGCTTGAGG....2441.255000000000311
..................................................TGAGTAATACAATTTTCCCATACTGAG..............................................................................2751.206100000010310
.................................................................................................................TTCTTCTGTT-TTCTTGCTAG.....................2061.177000060000001
.............................................................ATTTTCCCATACTGAGTC............................................................................1861.177000000000007
....................TGACATTAAATCGCTTCTTATTTTA..............................................................................................................2561.177000000010420
.................................................................................................................TTCTTCTGTT-TTCTTGCT.......................1861.177000000000007
...................................................GAGTAATACAATTTTCCC......................................................................................1851.005000050000000
....................................................................................................................TTCTGTT-TTCTTGCTAGAGTATAG..............2441.004000004000000
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAGTAT................2541.004000000000103
.....................................TTATTTTAGCGGCTGAGTAATACAATT...........................................................................................2731.003000000002001
...........................................................................................TGTGTAGCTCTCTAACAAGCA...........................................2151.005000000010400
..............................................................TTTTCCCATACTGAGTCCGTCCGGA....................................................................2551.005000000030020
.................................................................TCCCATACTGAGTCCGTCCG......................................................................2071.007000070000000
................................................................................................................................TGCTAGAGTATAGTCGCTTGAGG....2341.004000000003010
..................................................................................................................TCTTCTGTT-TTCTTGCTAGAGTATAGT.............2741.004000200100001
...........................................................................................TGTGTAGCTCTCTAACAAGCATTTCTTC....................................2841.004000000101020
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCT...................................................2531.003000000001020
...........................................TAGCGGCTGAGTAATACAATTTTCCCA.....................................................................................2741.004000000000211
.................................................................................................................TTCTTCTGTT-TTCTTGCTA......................1961.006000000000006
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACAAGCATT.........................................3131.003000000012000
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTA..................................................2631.003000000010020
...................................................GAGTAATACAATTTTCCCA.....................................................................................1951.005000050000000
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAG...................2241.004000040000000
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAAC................................................2631.003000000000120
.....................................................................................GAAGGTTGTGTAGCTCTCTAACAAGCA...........................................2731.003000000001110
.........................................TTTAGCGGCTGAGTAATACAATTTT.........................................................................................2541.004000000000004
...................................................GAGTAATACAATTTTCCCATACTGAGT.............................................................................2750.804000000200002
...................................................GAGTAATACAATTTTCCCATACTGA...............................................................................2550.804000000101020
.........TCTCTAGCGAGTGACATTAAATCGCT........................................................................................................................2650.804000000000301
.........................................................................................................................TT-TTCTTGCTAGAGTATAGTCGCT.........2440.753000000011010
............................................................................................................................TTCTTGCTAGAGTATAGTCGCTTGA......2540.753000000010020
................................................................................................................................TGCTAGAGTATAGTCGCTTGAGGTT..2540.753000000000003
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAGTATA...............2640.753000000000012
................................................................TTCCCATACTGAGTCCGTCCGGAAGG.................................................................2640.753000000011100
................................................................................................................TTTCTTCTGTT-TTCTTGCTAGAGT..................2440.753000000000210
...TCGGCTTCTCTAGCGAGTGACATTAAAT............................................................................................................................2840.753000000020010
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAGTATAG..............2740.753000000000003
..............................................................TTTTCCCATACTGAGTCCGTCCGGAAGG.................................................................2830.672000000000020
.....................................................................................GAAGGTTGTGTAGCTCTCTAACAAGC............................................2630.672000000000002
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTCT.....................................................2630.672000000010010
..................................................................................CCGGAAGGTTGTGTAGCTCTCTAACAAG.............................................2830.672000000001100
......................................TATTTTAGCGGCTGAGTAATACAAT............................................................................................2530.672000000010001
............................................................................GTCCGTCCGGAAGGTTGTGTAGC........................................................2330.672000000000002
..................................................................................CCGGAAGGTTGTGTAGCTCTCTAACA...............................................2630.672000000002000
........................................................................................................................GTT-TTCTTGCTAGAGTA.................1750.603000000000003
...........TCTAGCGAGTGACATTAAATCGCT........................................................................................................................2450.603000000000102
...........................................................................................TGTGTAGCTCTCTAACAAG.............................................1950.603000000000201
.........................................................TACAATTTTCCCATACTGAGTCCGTCCGGA....................................................................3050.603000000030000
..........................................................................................................................T-TTCTTGCTAGAGTATAG..............1850.603000000000003
......................................................TAATACAATTTTCCCATACTGAGTCCGT.........................................................................2850.603000000010200
.................................................CTGAGTAATACAATTTTCCCATACTGA...............................................................................2750.603000000000210
................................................................................................AGCTCTCTAACAAGCATTTCTTCTGTT-...............................2750.603000000010020
...................................................................................................TCTCTAACAAGCATTTCTTCTGTT-...............................2460.503000000000120
..........................................................................................................................T-TTCTTGCTAGAGTATAGTCGCTT........2440.502000000000020
..........................................................................................................................T-TTCTTGCTAGAGTATAGTCGCTTGAGG....2840.502000000001100
.......................................................................................AGGTTGTGTAGCTCTCTAACAAG.............................................2340.502000000011000
...........................................TAGCGGCTGAGTAATACAATTTT.........................................................................................2340.502000000000002
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAGT..................2340.502000000000101
...........................................TAGCGGCTGAGTAATACAATTTTCCC......................................................................................2640.502000000010100
............................................................................................................................TTCTTGCTAGAGTATAGTCGCTTGAGG....2740.502000000000110
.............................................................................................................................TCTTGCTAGAGTATAGTCGCTTGAGG....2640.502000000010010
...................................................................................................................................TAGAGTATAGTCGCT.........1540.502000000010001
............................................................................................................AGCATTTCTTCTGTT-TTCTTGCTAGAGTA.................2940.502000000010100
.................................................................TCCCATACTGAGTCCGTCCGGAAGG.................................................................2540.502000000010100
......................................................................................AAGGTTGTGTAGCTCTCTAAC................................................2140.502000000100001
.........................................................TACAATTTTCCCATACTGAGTCCGT.........................................................................2560.503000000010011
..............................................................................................GTAGCTCTCTAACAAGCATTTCTTCTGTT-...............................2940.502000000001100
......................................................................TACTGAGTCCGTCCGGAAGGTTGTGTA..........................................................2740.502000000010100
.....................................................................................................................TCTGTT-TTCTTGCTAGAGTATAGTCGC..........2740.502000000001010
......................................................................................AAGGTTGTGTAGCTCTCTAACAAGCATT.........................................2840.502000000000110
...........................................................................................TGTGTAGCTCTCTAACAAGC............................................2050.402000000000101
.............................................................ATTTTCCCATACTGAGTCCGTCCGGA....................................................................2650.402000000000011
..................................................TGAGTAATACAATTTTCCCATACTGAGT.............................................................................2850.402000000010100
............................................................AATTTTCCCATACTGAGTCCGTCCGGA....................................................................2750.402000000020000
.............................................................................TCCGTCCGGAAGGTTGTGTA..........................................................2050.402000000010010
........TTCTCTAGCGAGTGACATTAAATCGCT........................................................................................................................2750.402000000000101
...................................TCTTATTTTAGCGGCTGAGTAATACAA.............................................................................................2750.402000000000020
...........TCTAGCGAGTGACATTAAATCGCTTC......................................................................................................................2650.402000000000101
...................................TCTTATTTTAGCGGCTGAGTAATACA..............................................................................................2650.402000000010010
.....................................................................................................................TCTGTT-TTCTTGCTAGAG...................1850.402020000000000
..................................................TGAGTAATACAATTTTCCCATACT.................................................................................2450.402000000010010
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTCTAAC................................................3030.331000000000010
.....................................................................................GAAGGTTGTGTAGCTCTCTAACAA..............................................2430.331000000000001
.............................................................ATTTTCCCATACTGAG..............................................................................1660.332000000000002
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAG.............................................3330.331000000010000
.............................................................ATTTTCCCATACTGAGT.............................................................................1760.332000000000002
..................................................................................CCGGAAGGTTGTGTAGCTCTCTAAC................................................2530.331000000000010
.....................................................................................GAAGGTTGTGTAGCTCTCTAAC................................................2230.331000000000001
.......................................ATTTTAGCGGCTGAGTAATACAATTTT.........................................................................................2730.331000000010000
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAA.................................................2530.331000000000001
.....................................................................................GAAGGTTGTGTAGCTCTC....................................................1830.331000000000001
................................................................................GTCCGGAAGGTTGTGTAGCTCTC....................................................2330.331000000000001
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTAGCT.......................................................2730.331000000010000
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTA..................................................2530.331000000001000
...................................................................................CGGAAGGTTGTGTAGCTCTCTAAC................................................2430.331000000000010
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAACA...............................................2730.331000000000100
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAACAA..............................................3030.331000000010000
..............................................................................CCGTCCGGAAGGTTGTGTAGCT.......................................................2230.331000000001000
.................................................................................TCCGGAAGGTTGTGTAGCTCTCTAACAAGC............................................3030.331000000010000
.............................................................................TCCGTCCGGAAGGTTGTGTAGCT.......................................................2330.331000000000001
.................................................................................TCCGGAAGGTTGTGTAGCTCTC....................................................2230.331000000000100
...............................................................................CGTCCGGAAGGTTGTGTAGC........................................................2030.331000000000001
..........................TAAATCGCTTCTTATTTTAGCGGC.........................................................................................................2460.332000000000101
..................................TTCTTATTTTAGCGGCTGAGTAATACAAT............................................................................................2930.331000000000100
...............................................................................CGTCCGGAAGGTTGTGTAG.........................................................1930.331000000000001
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTAAC................................................2730.331000100000000
.................................................................................TCCGGAAGGTTGTGTAGCTCTCT...................................................2330.331000000000001
........................................TTTTAGCGGCTGAGTAATACAATT...........................................................................................2430.331000000001000
....................TGACATTAAATCGCTTCTTATTTT...............................................................................................................2460.332000000001100
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTAA.................................................2630.331000000000010
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTA..........................................................2440.251000000000100
...TCGGCTTCTCTAGCGAGTGACATTAA..............................................................................................................................2640.251000000001000
............................................AGCGGCTGAGTAATACAATTTTCCCA.....................................................................................2640.251000000010000
.......................................................................................AGGTTGTGTAGCTCTC....................................................1640.251000000000001
.................................................................TCCCATACTGAGTCCGTCCGGAAGGTT...............................................................2740.251000000001000
.......................................................................................AGGTTGTGTAGCTCTCTAACAAGC............................................2440.251000000000001
................................................................................................AGCTCTCTAACAAGCATTTCTTCTGTT-T..............................2840.251000000000010
.................................................................................................................................GCTAGAGTATAGTCGCTTGAGG....2240.251000000000001
.......................................................................................................................TGTT-TTCTTGCTAGAGTATAGTCGC..........2540.251000000001000
.......................................................................................................................TGTT-TTCTTGCTAGAGTATAGTCGCTT........2740.251000000000010
...................................................................................................................................TAGAGTATAGTCGCTTGAGG....2040.251000000000001
....................................................................................................................TTCTGTT-TTCTTGCTAGAGTA.................2140.251000000000001
.........................................TTTAGCGGCTGAGTAATACAATTTTCCC......................................................................................2840.251000000010000
................................................................TTCCCATACTGAGTCCGTCCGGAAGGTT...............................................................2840.251000000000010
...........................................................................AGTCCGTCCGGAAGGTTGTG............................................................2040.251000000000001
........................................................................................GGTTGTGTAGCTCTC....................................................1540.251000000000001
..GTCGGCTTCTCTAGCGAGTGACATTAAA.............................................................................................................................2840.251000000000010
..........................................TTAGCGGCTGAGTAATACAATTTTCCC......................................................................................2740.251000000000100
........................................................................................GGTTGTGTAGCTCTCTAAC................................................1940.251000000000001
...TCGGCTTCTCTAGCGAGTG.....................................................................................................................................1940.251000000001000
..GTCGGCTTCTCTAGCGAGTGA....................................................................................................................................2140.251000000000010
.............................................................................................................................TCTTGCTAGAGTATAGTCGCTTGA......2440.251000000000100
.....GGCTTCTCTAGCGAGTG.....................................................................................................................................1740.251000000000001
....................................................................................................................TTCTGTT-TTCTTGCTAGAGTATAGT.............2540.251000000000001
..........................................TTAGCGGCTGAGTAATACAATTTT.........................................................................................2440.251000000000001
...................................................................................................................................TAGAGTATAGTCGCTTGAGGT...2140.251000000000001
...................................................................CCATACTGAGTCCGTCCGGAAGGT................................................................2440.251000000010000
........................................................................................GGTTGTGTAGCTCTCT...................................................1640.251000000000001
..............................................................................................GTAGCTCTCTAACAAGCATTTCTTCTG..................................2740.251000000000010
......................................................................TACTGAGTCCGTCCGGAAGGTTGT.............................................................2440.251000000010000
...........................................TAGCGGCTGAGTAATACAATTTTCC.......................................................................................2540.251000000010000
.........................................TTTAGCGGCTGAGTAATACAATTT..........................................................................................2440.251000000000100
.........................................TTTAGCGGCTGAGTAATACAATTTTCC.......................................................................................2740.251000000010000
....CGGCTTCTCTAGCGAGTGACATTAAA.............................................................................................................................2640.251000000000010
............................................................................GTCCGTCCGGAAGGTTGTGT...........................................................2040.251000000000001
....CGGCTTCTCTAGCGAGTG.....................................................................................................................................1840.251000000000001
...........................................TAGCGGCTGAGTAATACAATTT..........................................................................................2240.251000000001000
..............................................................................................................................CTTGCTAGAGTATAGTCGCTTGAGG....2540.251000000000010
.........................................................................TGAGTCCGTCCGGAAGGTTGTG............................................................2240.251000000000001
......................................................................TACTGAGTCCGTCCGGAAGGTT...............................................................2240.251000000000010
......................................................................TACTGAGTCCGTCCGGAAGGT................................................................2140.251000000000010
............................................................................GTCCGTCCGGAAGGTT...............................................................1640.251000000000001
......................................................................................AAGGTTGTGTAGCTCTCTAACAAGCA...........................................2640.251000000001000
................................................................................................................................TGCTAGAGTATAGTCGCTTGAG.....2240.251000000001000
......................................................................................AAGGTTGTGTAGCTCTCTAACAAGC............................................2540.251000000000010
.......................................................................ACTGAGTCCGTCCGGAAGGTTGTGTA..........................................................2640.251000000001000
..................................................................CCCATACTGAGTCCGTCCGGAAGG.................................................................2440.251000000000001
................................................................................................AGCTCTCTAACAAGCATTTCTTCTGT.................................2650.201000000001000
...........................................................................................TGTGTAGCTCTCTAACAAGCATT.........................................2350.201000000000100
.......................................................AATACAATTTTCCCATACTGAG..............................................................................2250.201000000000001
.........TCTCTAGCGAGTGACATTAAATCG..........................................................................................................................2450.201000000010000
...........................................................................................TGTGTAGCTCTCTAACAAGCATTTC.......................................2550.201000000000010
.............................................................................TCCGTCCGGAAGGTTGT.............................................................1750.201000000000001
.............................................................................TCCGTCCGGAAGGTTGTG............................................................1850.201000000000001
..................................TTCTTATTTTAGCGGCTGAGTAATACA..............................................................................................2750.201000000000010
.........................................................................................................................TT-TTCTTGCTAGAGTATAG..............1950.201000000000001
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCT...................................2550.201000000000100
........................................................................................................................GTT-TTCTTGCTAGAGT..................1650.201000000000001
.........................................................................................................................TT-TTCTTGCTAGAGTATAGT.............2050.201000000000001
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCTGTT-...............................2850.201000000000100
.........................................................................................................................TT-TTCTTGCTAGAGTA.................1650.201000000000001
..............................................................TTTTCCCATACTGAGTCCGTCCGGAAG..................................................................2750.201000000000100
........................................................................................................AACAAGCATTTCTTCTGTT-TTCTTGC........................2650.201000000000010
....................................................AGTAATACAATTTTCCCATACTGA...............................................................................2450.201000000100000
....................................................AGTAATACAATTTTCCCATACTG................................................................................2350.201000000100000
...............................................................................CGTCCGGAAGGTTGTGTA..........................................................1850.201000000000001
..........CTCTAGCGAGTGACATTAAATCGCT........................................................................................................................2550.201000000100000
...........TCTAGCGAGTGACATTAAA.............................................................................................................................1950.201000000000010
..........................................................................................TTGTGTAGCTCTCTAACAAGC............................................2150.201000000000010
............................................................................................GTGTAGCTCTCTAACAAGCA...........................................2050.201000000010000
...........................................................................................TGTGTAGCTCTCTAACAAGCATTT........................................2450.201000000001000
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCTG..................................2650.201000000001000
............................................................................................................................TTCTTGCTAGAGTATAG..............1750.201000000000001
...................................................GAGTAATACAATTTTCCCATACTG................................................................................2450.201000000100000
...........TCTAGCGAGTGACATTAAAT............................................................................................................................2050.201000000000100
droSec2
GGGTCGGCTTCTCTAGCGAGTGACATTAAATCGCTTCTTATTTTAGCGGCTGAGTAATACAATTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCCTGCTAGAGTATAGTCGCTTGAGGTTTASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...................................................GAGTAATACAATTTTCCCATACTGAG..............................................................................26130.77100406
................................................................................................................................TGCTAGAGTATAGTCGCTTGAGG....23120.7590621
...................................................GAGTAATACAATTTTCCCATACTGAGTC............................................................................28130.4660006
..............................................................................................................................CCTGCTAGAGTATAGTCGCTTGAGGTT..2740.2510001
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTC....................................................24110.1820101
.........TCTCTAGCGAGTGACATTAAATCGC.........................................................................................................................25130.1520101
...................................................................................................................................TAGAGTATAGTCGCTTGAGGTTTA2480.1310100
.......................................................................ACTGAGTCCGTCCGGAAGGTT...............................................................2190.1111000
.........................................................................TGAGTCCGTCCGGAAGGTTGTGTAGC........................................................2690.1110001
........................................................................CTGAGTCCGTCCGGAAGGTTG..............................................................2190.1110001
............................................................................GTCCGTCCGGAAGGTTGTGTAGCTCT.....................................................26110.0910001
...............................................................................CGTCCGGAAGGTTGTGTAGCTCT.....................................................23110.0910001
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTAAC................................................28110.0910001
...........................................................CAATTTTCCCATACTGAGTCCGTC........................................................................24110.0910010
...........................................................................AGTCCGTCCGGAAGGTTGTGTAGCTC......................................................26110.0910001
...............................................................................CGTCCGGAAGGTTGTGTAGCTCTCTA..................................................26110.0910001
...........................................................................AGTCCGTCCGGAAGGTTGTGT...........................................................21110.0911000
.............................................................................TCCGTCCGGAAGGTTGTGTAGCTCTC....................................................26110.0910001
................................................................................................................................TGCTAGAGTATAGTCGCTTGAG.....22120.0810100
................................................................................GTCCGGAAGGTTGTGTAGCTCTCTAA.................................................26120.0810001
...................................................................................CGGAAGGTTGTGTAGCTCTCTAACA...............................................25120.0810001
................................................................................GTCCGGAAGGTTGTGTAGCTCTC....................................................23120.0810001
..................................................TGAGTAATACAATTTTCCCATACTGAG..............................................................................27130.0810100
....CGGCTTCTCTAGCGAGTGACA..................................................................................................................................21130.0810001
...................................................GAGTAATACAATTTTCCCATACTG................................................................................24130.0810001
..................................................TGAGTAATACAATTTTCCCATACT.................................................................................24130.0810001
..................................................TGAGTAATACAATTTTCCCATACTGA...............................................................................26130.0810001
....................................................AGTAATACAATTTTCCCATACTGAG..............................................................................25130.0810001
.........TCTCTAGCGAGTGACATTAAATCGCT........................................................................................................................26130.0810001
...................................................GAGTAATACAATTTTCCCATACTGA...............................................................................25130.0810001
droEre2
GGGTCTGCTTCTCTGGCGAGTGACATTAGTTCGCTTCTTATTTTTGCGGTTGAGTAATATAATTTCCCCATAGTGAGTCCGTCCGGAAAATTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTGSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
No Reads
droYak3
GGGTCTGCTTCTCTGGCGAGTGACATTAGTTCGCTTCTTATTTTTGCGGTTGAGTAATATAATTTCCCCATAGTGAGTCCGTCCGGAAAATTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTGSizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.............................................................................TCCGTCCGGAAAATTGTGTAGCTCTC....................................................2660.8351000040
.............................................................................TCCGTCCGGAAAATTGTGTAGCTCTCT...................................................2760.3320000020
...................................................................CCATAGTGAGTCCGTCCGGAAAATTG..............................................................2640.2510000100
..................................................TGAGTAATATAATTTCCCCATAGTGAG..............................................................................2780.2520000020
......................................................................TAGTGAGTCCGTCCGGAAAATTGTG............................................................2550.2010000010
......................................................................TAGTGAGTCCGTCCGGAAAATTGT.............................................................2450.2010000010
.....................................................................................................................TCTGTT-TTCTTGCTAGAGTATAGTCG...........2660.1710000010
.................................................................................................................TTCTTCTGTT-TTCTTGCTAGAGT..................2360.1710000010
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCTGT.................................2760.1710000010
...............................................................................................TAGCTCTCTAACAAGCATTTCTTCTGTT-...............................2860.1710000010
....................................................................CATAGTGAGTCCGTCCGGAAA..................................................................2170.1410000010
..........................TAGTTCGCTTCTTATTTTTGCGGT.........................................................................................................2470.1410000010
.........................................................TATAATTTCCCCATAGTGAGTCCGTC........................................................................2680.1310000010
........TTCTCTGGCGAGTGACATTAGTTCGC.........................................................................................................................2680.1310000010
.................................................TTGAGTAATATAATTTCCCCATAGT.................................................................................2580.1310000010
.................................................TTGAGTAATATAATTTCCCCATAGTGAG..............................................................................2880.1310000010
.......................................................AATATAATTTCCCCATAGTGAGTCCG..........................................................................2680.1310000010
............................................................AATTTCCCCATAGTGAGTCCGTC........................................................................2380.1310000010
...........................................................TAATTTCCCCATAGTGAGTCCGTCC.......................................................................2580.1310000010
......................................................TAATATAATTTCCCCATAGTGAGTCCG..........................................................................2780.1310000010
...................................................................................................................................TAGAGTATAGTCGCTTGAGGTTTG2480.1310000010
....................TGACATTAGTTCGCTTCTTATTTT...............................................................................................................2480.1310000010
droEug1
GGGTCTGCTTCCCTGGCCAGGGACATTAATTCGCTTCTTATTTTAGTGGCTGAGTAATATAGTTTTCCCATACTGAGTCCATCCGGAAGGTTATGTAGCTCTCTAACAAGCATTTCTTCCGTT-TTTTTGCTAGAGTATAGTCGCTTGAGGTTTGSizeHit CountTotal NormTotal
No Reads
droBia1
TGTTGTGCTTCTCTGGCCAGTGACATTAATTCACTTCTTATTTTCGTGACTCTGAATTATAATCTTCCCATACTGAGTCCATTCGGAAGATTGTGTAGCTCTCTAGCAAGCATTTCTTCTTTTTTTTTTGCTAGAGTTTAGTCGCTTGAGATTTGSizeHit CountTotal NormTotal
No Reads
droTak1
GGGTCTGCTTCTCTGGCCAGTGACATTAATTCGCTTCTTATTTTCGTGGCCGTGTAATAAAGCTTTCCCATACTGAGTCCGTCCGGGAGATTGTGTAGCTCTCTTACTAGCATTTCGTCCGTT-TTCTTGCTAGAGTATAGTCGCTTGAGGTTTTSizeHit CountTotal NormTotal
No Reads
droEle1
CGGTTCGAGTTTTTAGCCAATGATACCAGTTGGCCCCTCAACTTTGCTATTGAGAAAAATAGTTTATTGATAGAGAGTCCGCTTGGTAAGGTTTGAATTTCTCGGATTAATATAGCTTCCGTC-TTCTTGCAAGTGTAAAGTCGTTTAAGGTTTGSizeHit CountTotal NormTotal
No Reads
droRho1
GGGTCTGCTTCTCTGGCCAGTGACATTAATTTACTTCTTATTTTCGTGGCTGATAAATATAGTTTTCCCATACTGAGTCCATCCGGAAGATTGTGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTCTTGCTAGAGTATAGTTGCTTGAGATTTGSizeHit CountTotal NormTotal
No Reads
droFic1
GGGTCTGCTTCTCTGGCCAGTGACATTAATTCGCTTCTTATTTTCGTGGCTGTAAAATATAGTTTTCCCATACTGAGTCCGTCCGGAAGGTTGTGTAGCTCTCTAACAAGCATTTCTTCAGTT-TTCTTGCTAGAGTATAGTCGCTTAAGATTTASizeHit CountTotal NormTotal
No Reads
droKik1
CGGTCCGAGTCTTTCATCAATGAAACCAATTGGCCTCTCAATTTTGCTATTGCAAAAAATAGTTTGTTAATGGAAAGTCCGCTTGGTAGGGTTTCAATTTCTCGGATTAATATAGCTTCTGTC-TTCTTGCAAGTATACAGTCGTTTAAGATTTGSizeHit CountTotal NormTotal
No Reads
droAna3
GGGTCTGCTTCCCTGGCCAGGGACATTAATTCGCTTCTTATTTTAGTGGCTGTGTAATATAGTTTTCCCATACTGAGTCCATCCGGAAGGTTATGTAGCTCTCTAACAAGCATTTCTTCCGTT-TTTTTGCTAGAGTATAGTCGCTTGAGGTTTGSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
......................................................TAATATAGTTTTCCCATACTGAGTCC...........................................................................2670.292000011
.......................................................................ACTGAGTCCATCCGGAAGGTT...............................................................2140.251000001
......................................................TAATATAGTTTTCCCATACTGAGTCCA..........................................................................2750.201000010
............................................................AGTTTTCCCATACTGAGTCCATCCGGA....................................................................2750.201000010
......................................................TAATATAGTTTTCCCATACTGAGTC............................................................................2570.141000010
.............TGGCCAGGGACATTAATTCGCTTCT.....................................................................................................................2590.111000010
droBip1
GGGTCTGCTTCTCTGGCCAGGGACATTAATTCGCTTCTTATTTTGGTGGCTGTGTAATATAGTTTTCCCATACTGGGTCCGTCCGGAAGATTATGTAGCTCTCTAACAAGCATTTCTTCTGTT-TTTTTGCTAGAGTATAGTCGCTTGAGGTTTGSizeHit CountTotal NormTotal
No Reads
droPer2
----------------------------------TTCTTAGGTTCGTAATTTCGAAGAAAAGTTTCCCCAACGGTAAGTTATTTGGTAGGTTTTAAATTTCTCGGATGATTATTGGTTCCGTC-TTTTTGCATACATACTTGCGTTTTAGGTTTASizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
No Reads
droWil2
---------------------------------CTCCTTAGTTTCGTGATTTCAAAGAATAACTTGCCTAAGGGTAGATTATCCGGTAGAGTTTGTAATTCGTGAATAAGCATTGGTTCCGTT-TTTTTGCAATCGTAAATGCGTTTGAGATTTTSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
.............................................................................................TGTAATTCGTGAATAAGCATTGGT......................................2433.00900009
..........................................................................................................TAAGCATTGGTTCCGTT-TTTTTGCAATCG...................2922.50500005
...............................................................................TATCCGGTAGAGTTTGTAATTCGTGAA.................................................2732.33700007
.............................................................................................TGTAATTCGTGAATAAGCATTGGTTCCG..................................2832.33700007
...........................................................TAACTTGCCTAAGGGTAGATTATCCGG.....................................................................2731.67500005
...............................................................................TATCCGGTAGAGTTTGTAATTCGTGAATA...............................................2931.67500005
...................................................TCAAAGAATAACTTGCCTAAGGGTAGAT............................................................................2831.33400004
..................................................TTCAAAGAATAACTTGCCTAAGGGTA...............................................................................2631.00300003
.................................................................................................................TGGTTCCGTT-TTTTTGCAATCGTAAA...............2621.00200002
..........................................................................TAGATTATCCGGTAGAGTTTGTAAT........................................................2531.00310002
..................................................TTCAAAGAATAACTTGCCTAAGGGTAGAT............................................................................2931.00300003
..........................................................................TAGATTATCCGGTAGAGTTTGTAATTCG.....................................................2831.00300003
...............................................................................TATCCGGTAGAGTTTGTAATTCGTGA..................................................2630.67200002
....................................................CAAAGAATAACTTGCCTAAGGGTAGAT............................................................................2730.67200002
......................................TAGTTTCGTGATTTCAAAGAATAACT...........................................................................................2630.67200002
......................................................................................................TGAATAAGCATTGGTTCCGTT-TTTTT..........................2630.67200002
...............................................................................................TAATTCGTGAATAAGCATTGGTTCCG..................................2630.67200002
.................................................................................TCCGGTAGAGTTTGTAATTCGTGAATA...............................................2730.67200002
............................................................AACTTGCCTAAGGGTAGATTATCCGG.....................................................................2630.67200002
................................................................TGCCTAAGGGTAGATTATCCGGTAGAGT...............................................................2830.67200002
..........................................................................................................TAAGCATTGGTTCCGTT-TTTTTGCAAT.....................2720.50100001
.........................................................................................................................TT-TTTTTGCAATCGTAAATGCGTTT........2520.50100001
................................................................................................................TTGGTTCCGTT-TTTTTGCAATCGTAAA...............2720.50100001
............................................................................................TTGTAATTCGTGAATAAGCATTGG.......................................2430.33100001
.........................................................................GTAGATTATCCGGTAGAGTTTGTAAT........................................................2630.33100001
.............................................................................................TGTAATTCGTGAATAAGCATTGGTTCC...................................2730.33100001
....................................................CAAAGAATAACTTGCCTAAGGGTAGA.............................................................................2630.33100001
.................................................TTTCAAAGAATAACTTGCCTAAGGG.................................................................................2530.33100001
.............................................................................................TGTAATTCGTGAATAAGCATTGGTT.....................................2530.33100001
..........................................................................TAGATTATCCGGTAGAGTT..............................................................1930.33100001
...............................................................................TATCCGGTAGAGTTTGTAATTCGTGAAT................................................2830.33100001
.................................................................................TCCGGTAGAGTTTGTAATTCGTGAAT................................................2630.33100001
.....................................................................................GTAGAGTTTGTAATTCGTGAATAAGCAT..........................................2830.33100001
.........................................................................................................ATAAGCATTGGTTCCGTT-TTTTTGCA.......................2630.33100001
...........................................TCGTGATTTCAAAGAATAACTTGCC.......................................................................................2530.33100001
..........................................................................TAGATTATCCGGTAGAGTTTG............................................................2130.33110000
..............................................................................................GTAATTCGTGAATAAGCATTGGTTCCGT.................................2830.33100001
..........................................................................TAGATTATCCGGTAGAGTTTGTAATTC......................................................2730.33100001
................................................................................ATCCGGTAGAGTTTGTAATTCG.....................................................2230.33100001
................................................................................ATCCGGTAGAGTTTGTAATTCGTGAA.................................................2630.33100001
...................................................TCAAAGAATAACTTGCCTAAGGG.................................................................................2330.33100001
..............................................................................TTATCCGGTAGAGTTTGTAATTCGTGAA.................................................2830.33100001
..............................................................................TTATCCGGTAGAGTTTGTAATTCG.....................................................2430.33100001
.....................................................................AAGGGTAGATTATCCGGTAGAGTT..............................................................2430.33100001
......................................................................................TAGAGTTTGTAATTCGTGAATAAGCA...........................................2630.33100001
.........................................TTTCGTGATTTCAAAGAATAACTTGC........................................................................................2630.33100001
.................................................TTTCAAAGAATAACTTGCCTAAGGGTA...............................................................................2730.33100001
..........................................TTCGTGATTTCAAAGAATAACTTGCC.......................................................................................2630.33100001
..............................................TGATTTCAAAGAATAACTTGCCTAAGGG.................................................................................2830.33100001
.............................................................................................TGTAATTCGTGAATAAGCATTGGTTCCGT.................................2930.33100001
...........................................................................AGATTATCCGGTAGAGTTTGTAAT........................................................2430.33100001
......................................................................................................TGAATAAGCATTGGTTCCGT.................................2030.33100001
............................................................................................TTGTAATTCGTGAATAAGCATTGGTTC....................................2730.33100001
droMoj3
GCGTTTCGTAATTTGTC------TGTTAATTGAGATCTTATTTTCAAAATACCATAAAAAAGTTGACCTAAAGATAAGTTATCAGAAAGGTTTTGCAAATCGTGAATAAGCATAGCTTCACTT-TTTTTGTTACCATAATGTTGAATCAGATTAGSizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
................................................................................................................TAGCTTCACTT-TTTTTGTTACCATAATG..............2890.444000040
............TTGTC------TGTTAATTGAGATCTTATTTTC..............................................................................................................27110.182000020
.......................TGTTAATTGAGATCTTATTTTCAAAA..........................................................................................................26110.182000020
.............TGTC------TGTTAATTGAGATCTTATTTTCA.............................................................................................................27110.182000020
.............TGTC------TGTTAATTGAGATCTTATT.................................................................................................................23110.182000020
..............................TGAGATCTTATTTTCAAAATACCATA...................................................................................................26110.182000011
..........................................................................................................TAAGCATAGCTTCACTT-TTTTTGTT.......................2590.111000010
.................................................TACCATAAAAAAGTTGACCTAAAGA.................................................................................25100.101000010
...............................................................TGACCTAAAGATAAGTTATCAGAA....................................................................24100.101000010
...............TC------TGTTAATTGAGATCTTATTTTCAA............................................................................................................26110.091000010
............TTGTC------TGTTAATTGAGATCTTATTTTCA.............................................................................................................28110.091000010
.................................GATCTTATTTTCAAAATACCA.....................................................................................................21110.091000010
........TAATTTGTC------TGTTAATTGAGA........................................................................................................................21110.091100000
...............TC------TGTTAATTGAGATCTTATTTTCAAAA..........................................................................................................28110.091000010
..............................TGAGATCTTATTTTCAAAATACCATAAA.................................................................................................28110.091000010
..............................TGAGATCTTATTTTCAAAATACCA.....................................................................................................24110.091000010
.............TGTC------TGTTAATTGAGATCTTATTTTC..............................................................................................................26110.091000010
.............TGTC------TGTTAATTGAGATCTTATTTT...............................................................................................................25110.091000010
....TTCGTAATTTGTC------TGTTAATTGAGATC......................................................................................................................27110.091000010
........................GTTAATTGAGATCTTATTTTCA.............................................................................................................22110.091000010

Generated: 12/06/2013 at 02:30 PM