ID:

dsi_62

 Coordinate:

3L:10555527-10555602 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.6 -22.5 -22.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGTGTATTTAAGTTCAAGGGTGGTTCCACTTTATTGCTGAACATCTTGCCTCGGAAACTATATGTTTAATATTGAATGATTTCGAATGGTATTTTAAAATGATATTATTCATATAGTTTCAAGTGCCAAATTGTCCACAGATTAAAAAAAAAACTCATACAATTTATAAACTAAAA
***********************************.(((.(((..((((((..(((((((((((..(((((((.....((((.(((......))).)))))))))))..))))))))))).)).)).))..)))...)))************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553487
Ovary		 SRR553488
Ovary		 M025
embryo
 SRR553485
Ovary		 SRR553486
Ovary		 SRR618934
Ovary		 GSM343915
embryo
 M023
head
 M024
male body
 M053
Female-body		 O002
Head
..................................................TCGGAAACTATATGTTTAATAT........................................................................................................ 22 0 1 336.00 336 145 116 55 15 5 0 0 0 0 0 0
...................................................CGGAAACTATATGTTTAATATT....................................................................................................... 22 0 1 33.00 33 16 15 0 1 1 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAAT.......................................................................................................... 20 0 1 19.00 19 7 3 7 2 0 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAATATA....................................................................................................... 23 1 1 17.00 17 9 2 0 2 4 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAATA......................................................................................................... 21 0 1 17.00 17 5 9 1 0 1 0 0 0 0 0 1
..................................................TCGGAAACTATATGTTTAATATT....................................................................................................... 23 0 1 10.00 10 4 2 1 2 1 0 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAAGTG................................................... 23 0 1 8.00 8 0 0 8 0 0 0 0 0 0 0 0
.............................TTTATTGCTGAACATCTTGCCTCGGA......................................................................................................................... 26 0 1 5.00 5 1 0 0 2 2 0 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAAGT.................................................... 22 0 1 5.00 5 2 2 0 0 0 0 1 0 0 0 0
.....................................TGAACATCTTGCCTCGGAAACTATATGTT.............................................................................................................. 29 0 1 4.00 4 0 0 0 2 2 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAATATAA...................................................................................................... 24 2 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0
.......................................................................................................ATTATTCATATAGTTTCAAGTG................................................... 22 0 1 3.00 3 0 0 2 0 0 0 1 0 0 0 0
.................................................CTCGGAAACTATATGTTTAAT.......................................................................................................... 21 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0 0
..............................................................TGTTTAATATTGAATGATTTCGAATGG....................................................................................... 27 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.....................................TGAACATCTTGCCTCGGAAACTATA.................................................................................................................. 25 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAATATTG...................................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
............................................................TATGTTTAATATTGAATGATTTCGAA.......................................................................................... 26 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0
..............................TTATTGCTGAACATCTTGCCTCGGA......................................................................................................................... 25 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
..................................................TCGGAAACTATGTGTTTAATAT........................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAATATAAA..................................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................TTATTCATATAGTTTCAAGTGC.................................................. 22 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
......................................................................................................TATTATTCGTATAGTTTCAAGTG................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAAGTGT.................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................TCGGAAAGTATATGTTTAATAT........................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAAGTGCCAAATTGTCCACAGA................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................AATATTGAATGATTTCGAATG........................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................TATTATCCATATAGTTTCAAGTG................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................TCGGAAACTATATGTCTAATAT........................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................ATTATTCATATAGTTTCAAGTGT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................TGAACATCTTGCCTCGGAAACTAT................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...................................................CGGAAACTATATGTTTAATATTAA..................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTAATATTGAATGATTTCGAATGGTA..................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................CTCGGAAACTATATGTTTAATATTGAA.................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................TATTATTCGTATAGTTTCAAGTGA.................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................TGCTGAACATCTTGCCTCGGAAACTAT................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................TGTCCAGAGATTCAAAAAAA......................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................ACATCTTGCCTCGGAAACTAT................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
................................................................TTTAATATTGAATGATTTCGAATGGTA..................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................TCGGGAACTATATGTTTAATAT........................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAATATG....................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................TTATTGCTGAACATCTTGCCT............................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..........................CACTTTATTGCTGAACATCTTGCCTC............................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................TTGAATGATTTCGAATGGTAT.................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAAGTGA.................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................TGAATGATTTCGAATGGTATTTTAAAA............................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................TATTATTCGTATAGTTTCAAGT.................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................TGCCTCGGAAACTATATGTTTAATA......................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAACTG................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAAGTGAA................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................TAATATTGAATGATTTCGAATGGTA..................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................TTGTCCACAGATTAAAAAAAAAACTC.................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
..................................................TCTGAAACTATATGTTTAATAT........................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................TTTGCCTCGGAAACTATATGTTTAA........................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................TCAAGTGCCAAATTGTCCACA..................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAAG..................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................TCTTGCCTCGGAAACTATATGTTTAA........................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................AACTATATGTTTAATATTGAATGATTTCGAA.......................................................................................... 31 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................TTTCGAATGGTATTTTAAAATGATA........................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....TATTTACGTTCAAGGGTGGTTCCACT.................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................TATTATTCATATAGTTTCAAGTAA.................................................. 24 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..................................................TCGGAAACTATATGTTTAATAA........................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................TTATTCATATAGTTTCAAGTGAA................................................. 23 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.....ATTTACGTTCAAGGGTTGTCC...................................................................................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................TGTCCGAAGATTAAAAAA........................... 18 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................TGTCAACAGAGTGAAAAAAAAA....................... 22 3 17 0.06 1 0 1 0 0 0 0 0 0 0 0 0
..........................................ATCTTGCATCGGAACC...................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TTTTAGTTTATAAATTGTATGAGTTTTTTTTTTAATCTGTGGACAATTTGGCACTTGAAACTATATGAATAATATCATTTTAAAATACCATTCGAAATCATTCAATATTAAACATATAGTTTCCGAGGCAAGATGTTCAGCAATAAAGTGGAACCACCCTTGAACTTAAATACACG
************************************(((...(((..((.((.((.(((((((((((..(((((((((((.(((......))).)))).....)))))))..)))))))))))..))))))..))).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
Ovary		 SRR553486
Ovary
................GTATGAGATTCTTTTTTAA............................................................................................................................................. 19 2 2 2.00 4 2 0
................................TAATCTGTGGACAATTTGGCA........................................................................................................................... 21 0 1 2.00 2 1 1
....................................................................................................................................................TGGAGCCACCCTTGAA............ 16 1 1 1.00 1 1 0
................................................................................................................CATATAGTTTCCGAGGCAAGA........................................... 21 0 1 1.00 1 1 0
.TTTAGTTTATAAATTGTATGAA......................................................................................................................................................... 22 1 1 1.00 1 0 1
....................................................................................................................................ATGTTCAGCAGTAAAGTGGGA....................... 21 2 1 1.00 1 0 0
........................................................................................................................................TGAGGAATAAAGTGGAACGAC................... 21 3 3 0.67 2 0 0
....................................................................................................................................................TGGATCCACCCTTGAA............ 16 1 3 0.33 1 0 0
................GTATGAGATTCTTTTTTA.............................................................................................................................................. 18 2 13 0.23 3 1 0
.......................................................TGAAACTATCGGGATAATAT..................................................................................................... 20 3 6 0.17 1 0 1
...................................................................................................................................................GTGGAGCCAACCTTGAA............ 17 2 11 0.09 1 0 0
................GTATGAGGTTTTTTTTT............................................................................................................................................... 17 1 11 0.09 1 0 0
...................................................................................................................................................GTGGAGCCATCCTTGAA............ 17 2 14 0.07 1 0 0
....................................................................................................................................................TGGAGCCACCCTTGAAA........... 17 2 18 0.06 1 0 0
.............................................................................................................................AGGCAAGGTGTTGAGCA.................................. 17 2 20 0.05 1 0 0
....................................CTGCGGACAATTTGGAA........................................................................................................................... 17 2 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 3L:10555477-10555652 - dsi_62 CGTGTA--TTTAAGTTCAAGGGTGGTTCCA------CTTTA-TTGCTGA-AC-----------------------ATCTTGCCTCGGAAACTA-TATGTTTAATATTGA-ATGATT------TCGAATGGTATTTTAAAATGATATTATTCATATAGTTTCAAGTGCCAAATTGTCCAC---------AGATTAAAAAA--------------------------------------------AAAACTCATACAATTTATAAACT-------------------AAA----A
droSec2 scaffold_0:3383082-3383277 - CGTGTA--TTTACGTTCAAGGGTGGTCCCA------TTTCA-TTGCTGA-AC-----------------------ATCTTGCCTCGGAAACTA-TATGTTTAATATTTA-ATGATT------TCGAATGGTATTTTAAAATGATATTATTCATATAGTTTCAAGTGCCAAATTGTACAC---------AGATTAAAAAAA-------------------------------------------AAAACACATACAATTTATAAACTATTTTACACTTACTACCCTAAA----A
dm3 chr3L:11159814-11159997 - CGTGTA--ATAACGTTCAAGGGTGGTCCCA------TTTTTTTTGCTGA-AC-------------------AAC-ATCTTGCCTCGGAAACTA-TATGTTTAACATTGAGATGAATTAAAAATCGAATAGTGTATTAAAATGATATTATTCATATAGTTTCAAGTGCCAAATTGTCGAC---------AGATTAAAAA---------------------------------------------AGAACTCATA---------------------CTTACCACCCTATA----A
droEre2 scaffold_4784:11169048-11169230 - CGCATA--TTTACGTTCAAAGGAGGTCCCT------TTTTA-TGGCTGA-AC-------------------------------------ACTA-TATGTTTAATATTATAATGATTTGAAAATCGAATGGTCTA-TAAAATCATGTTATTCATATAGTTTCAAGTGCCAAATTGTCCAC---------AGACTA--AAGA----------------------------------------------ACTCATACGATTTATAAATTATTTTACACTTTCCACCCATTA----A
droYak3 3L:11196489-11196683 - CCCATA--CTTACGTTTA----------CT------TTATA-TTGCTGA-AC-------------------AAT-ATCTTACCTCGGAACCTG-TATGTTTAATATTCATATGATTTGAAAATCGAATAGTCTA-TAAAATGATATTATGCATATAGTTTCAAGTGCCAAATTGTCCAC---------AGATTTA-AAGA----------------------------------------------ACTCATACGATTTATAAATTATTTTACACTTGCCACCCAATAATATA
droEug1 scf7180000409711:3039649-3039848 - TACATA--TTTACATTATAAGATGGTCCTT------TTTTAATTGACAAA---AAAAAGTAAGAGTATAACGTAATCTTTACCTTGGCAACTA-TATGTTAAAAAATAAG---------------GTTGGTCTT----------------TTGGTATCTTTTGAAACCGAAAGACTTATGTCAATCATAGATTACGTTAA----------------------------------------------ACTAATACGATTTTTTATTTAT-TTACATTCACCACCCTTTA--A-A
droBia1 scf7180000302193:446303-446450 + CATGTA--TTTACATTTTAAGGTGGTCAAA------TATTTTTTAACAAG--GAAATCGTGCGAGTGTAACGATATCTTAGC---------------------------------------------------------------------------TTTCTGTGGCCAGATTGCCCAC---------ACAGCTCA-TAA----------------------------------------------ACCCGCACGATTTCAAATTTATTTTACATTCACCCCCCTCTA----A
droTak1 scf7180000415681:42252-42412 - CACATATATTTACATTTTAAGGGCATCGTA------TATTATTTAACAAG--GAAATCGGGCGAGTATAACGTTATCTTTGCCTTTGCATCT-----------------------------------------------------------------TTCCCAAGGCCAAATTGTCCAT---------AGATTACATTAA----------------------------------------------ACTCGTACGATTTTAGTTTTAATTTTCATTCATCACCCTCCA----A
droEle1 scf7180000490564:2073121-2073248 - CACATA--C--ACATTTTAGTGTGATCCGA------TTTTATTTGACAAAAG-----------------------ACTTTGTCTTGCCAACTTCCATGTCCAATATC----------------------------------------------------AGAAAGGCCAAATTGTCCAG---------AGAACACATTTA----------------------------------------------ACTCAAACATTTTTAAATTTAC-------------------------
droRho1 scf7180000780024:218095-218268 + CACATA--T--ACATTTTATTGTGATCCGA------TTTTATTTGACGAA-TGAAGTTGGAAGAGTAGATCATTATCTTTGTCTTGCCAACTA-TGTGTCCAATATCAGA---------------A----------------ATGCTTTTAACATAATTTTTAAGGCCAGATTGTCCAT---------AGATTACATAAA----------------------------------------------ACTCAAAAATTTGTTAATTTAATTT---------------------A
droFic1 scf7180000454113:3558324-3558427 + CATGTA--TTTACACATTAAGGTGGTCCGA------TTTAAAT--------------------------------------------------------------------------------------------------------------------TATATGACCCAATAGTCCAT---------ACAC-------A----------------------------------------------ACTAATGCGGTTATTTATCTTTTTTTAAT--ACCACACTTTTATA-A
droKik1 scf7180000302686:283404-283574 + CAAGCA--TT--------AAGGTGGTTATCTGTACTTAAAA-TTCATAA----AAAAAATGCAACTACAATATTTCTTTTACCTTGGAT--------------------------T------TCAAAT------CTAAGATGATTTTTCACGTCCAATATCAAAT--CAGTCAGCC-GA---------AAG-CCA-ATAA----------------------------------------------ATCCTTACGATTTTACATTTA---TAAACTAACCACCT--TA----A
droAna3 scaffold_13337:5450845-5451007 - CACACA--TTAACATATTAGGATCCTCAGA---------------------CAGAATCATAAGAGCAAAAAGTAATCATTGTCCTTTAAACTT-----------------------------------------------------------TTCAGTTAAAAAGGCAAAATTGTCCAT---------AGATTACCTTGTGTCCTTAGGATTTGTATTTATT-TTGCTTCTAATATACGA---------------------------------ATCGACCCGAC-TTT----A
droBip1 scf7180000396371:774607-774755 - CATCA-------------------------------------------GA-CAGAATCGTAGAAGCAGAAAGTAATCCTTGTCTTTGAAACTT-TG----------------------------------------------------------TAGTTAAAAAGACAAAATTGTCCAT---------AGATTACTTTGTGTCCTTAGGATTTGTATTTATTTTTGCTTT--ATATGCAAATAACGACCCGTC---TTTATAAAC------------------C---------
dp5 XR_group6:10547634-10547649 + ATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TATATTTACCA------------
droPer2 scaffold_20:501101-501116 + ATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TATATTTACCA------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
CGTGTA--TTTAAGTTCAAGGGTGGTTCCA------CTTTA-TTGCTGA-AC-----------------------ATCTTGCCTCGGAAACTA-TATGTTTAATATTGA-ATGATT------TCGAATGGTATTTTAAAATGATATTATTCATATAGTTTCAAGTGCCAAATTGTCCAC---------AGATTAAAAAA--------------------------------------------AAAACTCATACAATTTATAAACT-------------------AAA----ASizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
...................................................................................TCGGAAACTA-TATGTTTAATAT...........................................................................................................................................................................................221336.00336000550001551451160
....................................................................................CGGAAACTA-TATGTTTAATATT..........................................................................................................................................................................................22133.003300000001116150
...................................................................................TCGGAAACTA-TATGTTTAAT.............................................................................................................................................................................................20119.0019000700020730
...................................................................................TCGGAAACTA-TATGTTTAATA............................................................................................................................................................................................21117.0017000101001590
...................................................................................TCGGAAACTA-TATGTTTAATATT..........................................................................................................................................................................................23110.0010000100021420
...............................................................................................................................................TATTATTCATATAGTTTCAAGTG...............................................................................................................................2318.008000800000000
.....................................TTTA-TTGCTGA-AC-----------------------ATCTTGCCTCGGA.............................................................................................................................................................................................................2615.005000000022100
...............................................................................................................................................TATTATTCATATAGTTTCAAGT................................................................................................................................2215.005100000000220
..............................................TGA-AC-----------------------ATCTTGCCTCGGAAACTA-TATGTT.................................................................................................................................................................................................2914.004000000022000
................................................................................................................................................ATTATTCATATAGTTTCAAGTG...............................................................................................................................2213.003100200000000
..................................................................................CTCGGAAACTA-TATGTTTAAT.............................................................................................................................................................................................2113.003000200000010
................................................................................................TGTTTAATATTGA-ATGATT------TCGAATGG...................................................................................................................................................................2712.002000000020000
..............................................TGA-AC-----------------------ATCTTGCCTCGGAAACTA-TA.....................................................................................................................................................................................................2512.002000000001100
...................................................................................TCGGAAACTA-TATGTTTAATATTG.........................................................................................................................................................................................2412.002000200000000
..............................................................................................TATGTTTAATATTGA-ATGATT------TCGAA......................................................................................................................................................................2612.002000000011000
......................................TTA-TTGCTGA-AC-----------------------ATCTTGCCTCGGA.............................................................................................................................................................................................................2512.002000000002000
.................................................................................................................................................TTATTCATATAGTTTCAAGTGC..............................................................................................................................2212.002000200000000
...............................................................................................................................................................TCAAGTGCCAAATTGTCCAC---------AGA......................................................................................................2311.001000000010000
.....................................................................................................AATATTGA-ATGATT------TCGAATG....................................................................................................................................................................2111.001000000000001
..............................................TGA-AC-----------------------ATCTTGCCTCGGAAACTA-T......................................................................................................................................................................................................2411.001000000000001
...................................................................................................TTAATATTGA-ATGATT------TCGAATGGTA.................................................................................................................................................................2611.001000000001000
..................................................................................CTCGGAAACTA-TATGTTTAATATTGA-A......................................................................................................................................................................................2711.001000000001000
...........................................TGCTGA-AC-----------------------ATCTTGCCTCGGAAACTA-T......................................................................................................................................................................................................2711.001000000001000
..................................................AC-----------------------ATCTTGCCTCGGAAACTA-T......................................................................................................................................................................................................2111.001000000000001
..................................................................................................TTTAATATTGA-ATGATT------TCGAATGGTA.................................................................................................................................................................2711.001000000000010
......................................TTA-TTGCTGA-AC-----------------------ATCTTGCCT.................................................................................................................................................................................................................2111.001010000000000
............................CA------CTTTA-TTGCTGA-AC-----------------------ATCTTGCCTC................................................................................................................................................................................................................2611.001001000000000
.........................................................................................................TTGA-ATGATT------TCGAATGGTAT................................................................................................................................................................2111.001000000000001
..........................................................................................................TGA-ATGATT------TCGAATGGTATTTTAAAA.........................................................................................................................................................2711.001000000010000
...............................................................................TGCCTCGGAAACTA-TATGTTTAATA............................................................................................................................................................................................2511.001000000001000
....................................................................................................TAATATTGA-ATGATT------TCGAATGGTA.................................................................................................................................................................2511.001000000001000
...........................................................................................................................................................................TTGTCCAC---------AGATTAAAAAA--------------------------------------------AAAACTC...........................................2611.001000000100000
...............................................................................................................................................................TCAAGTGCCAAATTGTCCAC---------A........................................................................................................2111.001000000000100
...............................................................................................................................................TATTATTCATATAGTTTCAAG.................................................................................................................................2111.001000100000000
............................................................................TCTTGCCTCGGAAACTA-TATGTTTAA..............................................................................................................................................................................................2611.001000000000001
........................................................................................AACTA-TATGTTTAATATTGA-ATGATT------TCGAA......................................................................................................................................................................3111.001000000010000
..................................................................................................................TT------TCGAATGGTATTTTAAAATGATA....................................................................................................................................................2511.001000000010000
droSec2
CGTGTA--TTTACGTTCAAGGGTGGTCCCA------TTTCA-TTGCTGA-AC-----------------------ATCTTGCCTCGGAAACTA-TATGTTTAATATTTA-ATGATT------TCGAATGGTATTTTAAAATGATATTATTCATATAGTTTCAAGTGCCAAATTGTACAC---------AGATTAAAAAAA-------------------------------------------AAAACACATACAATTTATAAACTATTTTACACTTACTACCCTAAA----ASizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
...GTA--TTTACGTTCAAGGGT..............................................................................................................................................................................................................................................................................1812.0020200
...............................................GA-AC-----------------------ATCTTGCCTCGGAAACTA-TATGT..................................................................................................................................................................................................2711.0010001
.........................................................................................................................................................ATAGTTTCAAGTGCCAAATT........................................................................................................................2011.0010100
......................................TCA-TTGCTGA-AC-----------------------ATCTTGCCTCGGAAA...........................................................................................................................................................................................................2711.0010001
........................................................................................................ATTTA-ATGATT------TCGAATGGTATTTT.............................................................................................................................................................2511.0010100
...........ACGTTCAAGGGTGGTCCC........................................................................................................................................................................................................................................................................1811.0010100
...............................................................................................................................................TATTATTCATATAGTTTCAAGT................................................................................................................................2211.0010100
droEre2
CGCATA--TTTACGTTCAAAGGAGGTCCCT------TTTTA-TGGCTGA-AC-------------------------------------ACTA-TATGTTTAATATTATAATGATTTGAAAATCGAATGGTCTA-TAAAATCATGTTATTCATATAGTTTCAAGTGCCAAATTGTCCAC---------AGACTA--AAGA----------------------------------------------ACTCATACGATTTATAAATTATTTTACACTTTCCACCCATTA----ASizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
...............................................................................................................................................................TCAAGTGCCAAATTGTCCAC---------AGAC.....................................................................................................2411.001000010
.........................TCCCT------TTTTA-TGGCTGA-AC-------------------------------------ACTA-TATGT..................................................................................................................................................................................................2811.001000010
..............................................................................................................................................................................TCCAC---------AGACTA--AAGA----------------------------------------------ACTCATACGAT....................................2611.001000010
droYak3
CCCATA--CTTACGTTTA----------CT------TTATA-TTGCTGA-AC-------------------AAT-ATCTTACCTCGGAACCTG-TATGTTTAATATTCATATGATTTGAAAATCGAATAGTCTA-TAAAATGATATTATGCATATAGTTTCAAGTGCCAAATTGTCCAC---------AGATTTA-AAGA----------------------------------------------ACTCATACGATTTATAAATTATTTTACACTTGCCACCCAATAATATASizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
.............................................................................................................................................................................GTCCAC---------AGATTTA-AAGA----------------------------------------------ACTC...........................................2111.0010000100
........................................................................AT-ATCTTACCTCGGAACCTG-TATGTTTAAT.............................................................................................................................................................................................3011.0010010000
droEug1
TACATA--TTTACATTATAAGATGGTCCTT------TTTTAATTGACAAA---AAAAAGTAAGAGTATAACGTAATCTTTACCTTGGCAACTA-TATGTTAAAAAATAAG---------------GTTGGTCTT----------------TTGGTATCTTTTGAAACCGAAAGACTTATGTCAATCATAGATTACGTTAA----------------------------------------------ACTAATACGATTTTTTATTTAT-TTACATTCACCACCCTTTA--A-ASizeHit CountTotal NormTotal
No Reads
droBia1
CATGTA--TTTACATTTTAAGGTGGTCAAA------TATTTTTTAACAAG--GAAATCGTGCGAGTGTAACGATATCTTAGC---------------------------------------------------------------------------TTTCTGTGGCCAGATTGCCCAC---------ACAGCTCA-TAA----------------------------------------------ACCCGCACGATTTCAAATTTATTTTACATTCACCCCCCTCTA----ASizeHit CountTotal NormTotal
No Reads
droTak1
CACATATATTTACATTTTAAGGGCATCGTA------TATTATTTAACAAG--GAAATCGGGCGAGTATAACGTTATCTTTGCCTTTGCATCT-----------------------------------------------------------------TTCCCAAGGCCAAATTGTCCAT---------AGATTACATTAA----------------------------------------------ACTCGTACGATTTTAGTTTTAATTTTCATTCATCACCCTCCA----ASizeHit CountTotal NormTotal
No Reads
droEle1
CACATA--C--ACATTTTAGTGTGATCCGA------TTTTATTTGACAAAAG-----------------------ACTTTGTCTTGCCAACTTCCATGTCCAATATC----------------------------------------------------AGAAAGGCCAAATTGTCCAG---------AGAACACATTTA----------------------------------------------ACTCAAACATTTTTAAATTTAC-------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CACATA--T--ACATTTTATTGTGATCCGA------TTTTATTTGACGAA-TGAAGTTGGAAGAGTAGATCATTATCTTTGTCTTGCCAACTA-TGTGTCCAATATCAGA---------------A----------------ATGCTTTTAACATAATTTTTAAGGCCAGATTGTCCAT---------AGATTACATAAA----------------------------------------------ACTCAAAAATTTGTTAATTTAATTT---------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
CATGTA--TTTACACATTAAGGTGGTCCGA------TTTAAAT--------------------------------------------------------------------------------------------------------------------TATATGACCCAATAGTCCAT---------ACAC-------A----------------------------------------------ACTAATGCGGTTATTTATCTTTTTTTAAT--ACCACACTTTTATA-ASizeHit CountTotal NormTotal
No Reads
droKik1
CAAGCA--TT--------AAGGTGGTTATCTGTACTTAAAA-TTCATAA----AAAAAATGCAACTACAATATTTCTTTTACCTTGGAT--------------------------T------TCAAAT------CTAAGATGATTTTTCACGTCCAATATCAAAT--CAGTCAGCC-GA---------AAG-CCA-ATAA----------------------------------------------ATCCTTACGATTTTACATTTA---TAAACTAACCACCT--TA----ASizeHit CountTotal NormTotal
No Reads
droAna3
CACACA--TTAACATATTAGGATCCTCAGA---------------------CAGAATCATAAGAGCAAAAAGTAATCATTGTCCTTTAAACTT-----------------------------------------------------------TTCAGTTAAAAAGGCAAAATTGTCCAT---------AGATTACCTTGTGTCCTTAGGATTTGTATTTATT-TTGCTTCTAATATACGA---------------------------------ATCGACCCGAC-TTT----ASizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
..................................................................................................................................................................................................................................CTTCTAATATACGA---------------------------------ATCGACC.............2111.001000001
.........................................................................AATCATTGTCCTTTAAACTT-----------------------------------------------------------TTCAGT.......................................................................................................................................2611.001010000
................................................................................................................................................................................................TACCTTGTGTCCTTAGGATTTGT..............................................................................2320.501000001
................TTAGGATCCTCAGA---------------------CAGAATC...........................................................................................................................................................................................................................................2120.501000001
droBip1
CATCA-------------------------------------------GA-CAGAATCGTAGAAGCAGAAAGTAATCCTTGTCTTTGAAACTT-TG----------------------------------------------------------TAGTTAAAAAGACAAAATTGTCCAT---------AGATTACTTTGTGTCCTTAGGATTTGTATTTATTTTTGCTTT--ATATGCAAATAACGACCCGTC---TTTATAAAC------------------C---------SizeHit CountTotal NormTotal
No Reads
dp5
ATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TATATTTACCA------------SizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
No Reads
droPer2
ATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TATATTTACCA------------SizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
No Reads

Generated: 12/06/2013 at 02:29 PM