ID:

dsi_58

 Coordinate:

3L:22502473-22502559 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.7 -17.4 -17.3

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AAAATGCAAGGGCGAGTATTCATTTTTTTGTTGCACAAAAAAGTGTCTATTGGCTAGGTATGACTTTTATAATAAAAAATATGGTGCAGGTATCCACTTTTTGATTTTATATAATAATCCGTCATGCCAGACTCGATCAAACGTTAAAGAAATGTTGCAGTGCAGTATTTTTTGCTCTCAAATGCTG
***********************************.......((....(((((((.((((((((..((((.(((.(((((..((((........)))).....))))).))).))))...))))))))))..)))))...)).........************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 SRR553487
Ovary		 M025
embryo
 SRR618934
Ovary		 SRR553486
Ovary		 M053
Female-body		 SRR553488
Ovary
...............................................................................................................TAATAATCCGTCATGCCAGACTCGA................................................... 25 0 2 86.00 172 43 28 83 4 2 10 2
...............................TGCACAAAAAAGTGTCTATTGGCTAGGTA............................................................................................................................... 29 0 1 65.00 65 65 0 0 0 0 0 0
..................................................TGGCTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 29 0 1 46.00 46 32 14 0 0 0 0 0
............................................................................................................................TGCCAGACTCGATCAAACGCTAAAGA..................................... 26 1 1 39.00 39 21 17 0 0 0 1 0
.....................................................CTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 26 0 1 29.00 29 4 25 0 0 0 0 0
..................................................TGGCTAGGTATGACTTTTATAATAAA............................................................................................................... 26 0 1 27.00 27 20 7 0 0 0 0 0
............................TGTTGCACAAAAAAGTGTCTATTGGC..................................................................................................................................... 26 0 1 27.00 27 14 9 0 3 0 1 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCGAT.................................................. 26 0 2 25.00 50 9 14 20 5 0 1 1
........AGGGCGAGTATTCATTTTTTTGTTGCA........................................................................................................................................................ 27 0 1 23.00 23 7 4 0 0 6 0 6
...............................................................................TATGTTGCAGGTATCCACTTTTTGAT.................................................................................. 26 1 1 19.00 19 0 0 0 0 11 0 8
...............................TGCACAAAAAAGTGTCTATTGGCTAGG................................................................................................................................. 27 0 1 19.00 19 19 0 0 0 0 0 0
...................................................................................................................................CTCGATCAAACGCTAAAGAAATGTTGC............................. 27 1 1 18.00 18 9 2 0 7 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCGATC................................................. 27 0 2 18.00 36 8 3 15 4 0 6 0
..................................................TGGCTAGGTATGACTTTTATAATAAAAA............................................................................................................. 28 0 1 15.00 15 8 7 0 0 0 0 0
......................................................TAGGTATGACTTTTATAATAAAAAA............................................................................................................ 25 0 1 14.00 14 4 7 0 0 2 0 1
.................................................TTGGCTAGGTATGACTTTTATAATAAA............................................................................................................... 27 0 1 12.00 12 7 4 0 0 0 0 1
.................................................TTGGCTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 30 0 1 12.00 12 11 1 0 0 0 0 0
..................................................TGGCTAGGTATGACTTTTATAATAAAA.............................................................................................................. 27 0 1 12.00 12 6 4 1 0 0 0 1
...........................TTGTTGCACAAAAAAGTGTCTATTGGC..................................................................................................................................... 27 0 1 11.00 11 2 8 0 1 0 0 0
...............................................................................TATGTTGCAGGTATCCACTTTTTGA................................................................................... 25 1 1 11.00 11 0 1 0 0 6 0 4
.............................................................................................................................................CGCTAAAGAAATGTTGCAGTGCAGTA.................... 26 1 1 10.00 10 4 3 0 3 0 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTGCAGTGCAGTA.................... 28 1 1 10.00 10 3 7 0 0 0 0 0
...............................TGCACAAAAAAGTGTCTATTGGTTAGGTA............................................................................................................................... 29 1 3 9.33 28 0 0 0 0 25 0 3
............................................................................................................................TGCCAGACTCGATCAAACGCTAAAGAA.................................... 27 1 1 9.00 9 2 6 0 0 0 1 0
....TGCAAGGGCGAGTATTCATTTTTTTGT............................................................................................................................................................ 27 0 1 8.00 8 1 2 0 4 0 1 0
...............................TGCACAAAAAAGTGTCTATTGGCTAAG................................................................................................................................. 27 1 1 7.00 7 0 4 0 3 0 0 0
...............................TGCACAAAAAAGTGTCTATTGGCTAAA................................................................................................................................. 27 2 1 7.00 7 0 5 0 0 0 0 2
........................................................................TAAAAAATATGGTGCAGGTATCCACT......................................................................................... 26 0 1 7.00 7 5 2 0 0 0 0 0
....TGCAAGGGCGAGTATTCATTTTTTTG............................................................................................................................................................. 26 0 1 7.00 7 1 4 0 2 0 0 0
...............................................................................................................TAATAATCCGTCATGGCAGACTCGAT.................................................. 26 1 2 7.00 14 0 0 0 0 6 0 8
...............................................................................................................TAATAATCCGTCATGCCAGACTCGG................................................... 25 1 2 6.50 13 0 0 13 0 0 0 0
...................................................................................................................................CTCGATCAAACGCTAAAGAAATGTTG.............................. 26 1 1 6.00 6 0 0 0 4 0 1 1
...........................................................................................................................................AACGCTAAAGAAATGTTGCAGTGCAGT..................... 27 1 1 6.00 6 1 2 0 3 0 0 0
..........................TTTGTTGCACAAAAAAGTGTCTATTGGC..................................................................................................................................... 28 0 1 5.00 5 2 3 0 0 0 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTGCAGTGCAG...................... 26 1 1 5.00 5 0 0 0 4 0 1 0
....TGCAAGGGCGAGTATTCATTTTTTT.............................................................................................................................................................. 25 0 3 5.00 15 2 7 0 3 1 2 0
..................................................TGGCTAGGTATGACTTTTATAATAAAAAAA........................................................................................................... 30 1 1 4.00 4 2 2 0 0 0 0 0
......................................................TAGGTATGACTTTTATAATAAAAAATA.......................................................................................................... 27 0 1 4.00 4 3 0 0 0 1 0 0
............................................................................................................................TGCCAGACTCGATCAAACGCTAAAGAAA................................... 28 1 1 4.00 4 0 3 0 0 0 0 1
................................................................................................................................................TAAAGAAATGTTGCAGTGCAGTATT.................. 25 0 1 4.00 4 1 1 0 2 0 0 0
.......................TTTTTTGTTGCACAAAAAAGTGTCTA.......................................................................................................................................... 26 0 1 4.00 4 0 2 0 1 0 0 1
...............................TGCACAAAAAAGTGTCTATTGGTTAGG................................................................................................................................. 27 1 3 3.67 11 0 1 0 0 4 0 6
...............................TGCACAAAAAAGTGT............................................................................................................................................. 15 0 2 3.50 7 0 7 0 0 0 0 0
...............................TGCACAAAAAAGTGTCTATTGGCTAAGGA............................................................................................................................... 29 2 1 3.00 3 0 3 0 0 0 0 0
......................................................TAGGTATGACTTTTATAATAAAAA............................................................................................................. 24 0 1 3.00 3 1 2 0 0 0 0 0
..................................................TGGTTAGGTATGACTTTTATAATAAA............................................................................................................... 26 1 3 3.00 9 0 1 0 0 5 0 3
.......AAGGGCGAGTATTCATTTTTTTGTTGCA........................................................................................................................................................ 28 0 1 3.00 3 2 1 0 0 0 0 0
.................................................TTGGCTAGGTATGACTTTTATAATAAAA.............................................................................................................. 28 0 1 3.00 3 2 1 0 0 0 0 0
...............................TGCACAAAAAAGTGTC............................................................................................................................................ 16 0 1 3.00 3 0 0 0 3 0 0 0
............................................................TGACTTTTATAATAAAAAATATGGTGCA................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0
..........................................................TATGACTTTTATAATAAAAAATATGG....................................................................................................... 26 0 1 3.00 3 0 2 0 0 0 1 0
.....................................................................................................................TCCGTCATGCCAGACTCGATCAAACG............................................ 26 0 1 3.00 3 3 0 0 0 0 0 0
.....................................................CTAGGTATGACTTTTATAATAAAAAATA.......................................................................................................... 28 0 1 3.00 3 0 3 0 0 0 0 0
........................................................................................................TTTTATATAATAATCCGTCATGCCAGA........................................................ 27 0 2 3.00 6 4 2 0 0 0 0 0
.....................................................................................................................TCCGTCATGGCAGACTCGATCAAACGCT.......................................... 28 2 2 3.00 6 0 0 0 0 5 0 1
...........GCGAGTATTCATTTTTTTGT............................................................................................................................................................ 20 0 1 3.00 3 0 0 0 3 0 0 0
.........................................................................................................TTTATATAATAATCCGTCATGGCAGA........................................................ 26 1 2 3.00 6 0 0 0 0 2 0 4
.....................................................................................................................TCCGTCATGGCAGACTCGATCAAACGC........................................... 27 2 2 3.00 6 0 0 0 0 3 0 3
..................................................TGGCTAGGTATGACTTTTATAATAA................................................................................................................ 25 0 1 3.00 3 1 2 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGGCAGACTCGA................................................... 25 1 2 2.50 5 0 0 0 0 2 0 3
.....................................................................................................................TCCGTCATGCCAGACTCGATCAAACGC........................................... 27 1 2 2.50 5 1 1 0 1 0 2 0
...............................................................................................................TAATAATCCGTCATGCC........................................................... 17 0 2 2.50 5 0 0 0 5 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCG.................................................... 24 0 2 2.50 5 0 3 0 2 0 0 0
..................................................................................................................TAAAAGGTCATGCCAGACTCGATCAAA.............................................. 27 3 2 2.50 5 0 0 0 0 2 0 3
........................................................................................................................................TCAAACGCTAAAGAAATGTTGCAGTGC........................ 27 1 1 2.00 2 1 0 0 0 0 1 0
...........................TTGTTGCACAAAAAAGTGTCTATTGG...................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACT...................................................... 22 0 2 2.00 4 3 0 0 0 0 0 1
..........................................................................................................................................AAACGCTAAAGAAATGTTGC............................. 20 1 1 2.00 2 0 0 0 2 0 0 0
.................................................................................TGTTGCAGGTATCCACTTTTTGA................................................................................... 23 1 1 2.00 2 0 0 0 0 0 0 2
.................................................TTGGCTAGGTATGACTTTTATAATAAAAA............................................................................................................. 29 0 1 2.00 2 2 0 0 0 0 0 0
...............................................................................TATGTTGCAGGTATCCACTTTTTGATT................................................................................. 27 1 1 2.00 2 0 0 0 0 2 0 0
.............................................................................................................................................CGCTAAAGAAATGTTGCAGTGCAGTATT.................. 28 1 1 2.00 2 0 2 0 0 0 0 0
.......AAGGGCGAGTATTCATTTTTTTGT............................................................................................................................................................ 24 0 1 2.00 2 0 2 0 0 0 0 0
.................................................................................................................................GACTCGATCAAACGCTAAAGAAATGT................................ 26 1 1 2.00 2 0 1 0 1 0 0 0
..........................................................................................................................CATGCCAGACTCGATCAAACGCTAAAGA..................................... 28 1 1 2.00 2 0 2 0 0 0 0 0
...................................................................TATAATAAAAAATATGTTGCAGGTA............................................................................................... 25 1 1 2.00 2 0 0 0 0 0 0 2
........................TTTTTGTTGCACAAAAAAGTGTCTA.......................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0
...................................................................TATAATAAAAAATATGGTGCAGGTA............................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................................AGACTCGATCAAACGCTAAAGAAATGT................................ 27 1 1 2.00 2 1 1 0 0 0 0 0
........................................AAGTGTCTATTGGCTAGGTA............................................................................................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0
..............................TTGCACAAAAAAGTGTCTATTGGC..................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGA........................................................ 20 0 2 2.00 4 2 1 0 1 0 0 0
...............................................................................TATGTTGCAGGTATCCACTTTTTGAA.................................................................................. 26 2 1 2.00 2 0 0 0 0 0 0 2
...............................................................................................................TAATAATCCGTCATGCCAGACTCGATCA................................................ 28 0 2 2.00 4 0 0 0 1 0 3 0
..............................................................................ATATGTTGCAGGTATCCACTTTTTGA................................................................................... 26 1 1 2.00 2 0 0 0 0 1 0 1
............................TGTTGCACAAAAAAGTGTC............................................................................................................................................ 19 0 1 2.00 2 0 0 0 2 0 0 0
..................................................TGGTTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 29 1 3 2.00 6 0 0 0 0 2 0 4
.........................TTTTGTTGCACAAAAAAGTGTCTA.......................................................................................................................................... 24 0 1 2.00 2 1 0 0 1 0 0 0
........AGGGCGAGTATTCATTTTTTTGTTGC......................................................................................................................................................... 26 0 1 2.00 2 0 0 0 0 1 0 1
.............................................................................................................TATAATAATCCGTCATGCCAGACTCGA................................................... 27 0 2 2.00 4 0 0 2 2 0 0 0
................................................................TTTTATAATAAAAAATATGTTGCAGG................................................................................................. 26 1 1 2.00 2 0 0 0 0 2 0 0
...........................................................................................................TATATAATAATCCGTCATGCCAGACT...................................................... 26 0 2 2.00 4 1 0 1 1 0 0 1
.............................................................................................................................................CGCTAAAGAAATGTTGCAGTGCAGT..................... 25 1 1 2.00 2 0 0 0 2 0 0 0
........................................................................................................TTTTATATAATAATCCGTCATGGCAGA........................................................ 27 1 2 2.00 4 0 0 0 0 3 0 1
......................................................................................................................................GATCAAACGCTAAAGAAATGTTGC............................. 24 1 1 2.00 2 0 0 0 2 0 0 0
................................................................................................................................................TAAAGAAATGTTGCAGTGCAGTA.................... 23 0 1 2.00 2 0 0 0 2 0 0 0
.....................................................................................................................TCCGTCATGCCAGACTCGATCAAACGCT.......................................... 28 1 2 1.50 3 1 1 0 1 0 0 0
...........................................................................................................TATATAATAATCCGTCATGGCAGACTCGA................................................... 29 1 2 1.50 3 0 1 0 0 1 0 1
.....................................................................................................TGATTTTATATAATAATCCGTCATGGC........................................................... 27 1 2 1.50 3 0 0 0 0 1 0 2
.........................................................................................................TTTATATAATAATCCGTCATGCCAGA........................................................ 26 0 2 1.50 3 3 0 0 0 0 0 0
......................................................................................................................AGGTCATGCCAGACTCGATCAAACGCT.......................................... 27 3 3 1.33 4 0 0 0 0 3 0 1
.......................................................................................................................CGTCATGGCAGACTCGATCAAACGCT.......................................... 26 2 3 1.33 4 0 0 0 0 4 0 0
....TGCAAGGGCGAGTATTCATTTTTT............................................................................................................................................................... 24 0 3 1.33 4 1 3 0 0 0 0 0
....................................................................................TGCAGGTATCCACTTTTTGATTTTATA............................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0
...............................................TATTGGCTAGGTATGACTTTTATAATAAAA.............................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................AGGTATCCACTTTTTGATTTTATA............................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 1
.................................................TTGGCTAGGTATGACTTTTATAAT.................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................TTATATAATAATCCGTCATGGCAGACT...................................................... 27 1 2 1.00 2 0 0 0 0 2 0 0
...............................TGCACAAAAAAGTGTCTATTGGCTAAGAA............................................................................................................................... 29 2 1 1.00 1 0 1 0 0 0 0 0
.......................................AAAGTGTCTATTGGCTAGGTATGACT.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
......................................AAAAGTGTCTATTGGCT.................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................TTGCAGGTATCCACTTTTTGATTTTATA............................................................................ 28 1 1 1.00 1 0 0 0 0 0 0 1
..............................................................................ATATGTTGCAGGTATCCACTTTTTGAA.................................................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATCCCAGACTCGA................................................... 25 1 2 1.00 2 2 0 0 0 0 0 0
....................................AAAAAAGTGTCTATTGGCTAGGTA............................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
...............................TGCACAAAAAAGTGTCT........................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0
......................TTTTTTTGTTGCACAAAAAAGTGTCTA.......................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0
...........GCGAGTATTCATTTTTTTG............................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0
.....................................................CTAGGTATGACTTTTATAATAAAAA............................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................CATGCCAGACTCGATCAAACGCTAAAG...................................... 27 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................TCATGCCAGACTCGATCAAACGCTAAAGAA.................................... 30 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................CTAGGTATGACTTTTATAATAAAAAAT........................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
.................................................TTGGTTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 30 1 3 1.00 3 0 0 0 0 3 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTGCAG........................... 21 1 1 1.00 1 0 0 0 1 0 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTG.............................. 18 1 1 1.00 1 0 0 0 1 0 0 0
...........................TTGTTGCACAAAAAAGTGTCTATTGGA..................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................CTAAAGAAGTGTTGCAGTGCAG...................... 22 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................TGCAGGTATCCACTTTTTGATTT................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0 0
..................................................TGGCTAGGTATGACCTTTATAATAAAAAA............................................................................................................ 29 1 1 1.00 1 0 1 0 0 0 0 0
...............................TGCACAAAAAAGTGTCTATTGGCTAGGGA............................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0
............................................GTCTATTGGCTAGGTA............................................................................................................................... 16 0 1 1.00 1 0 0 0 1 0 0 0
.................................................TTGGCTAGGTATGACTTTTATAATAA................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................TGGTGCAGGTATCCACTTTTTGAT.................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0
.............................................................................................................TATAATAATCCGTCATGGCAGACTCGA................................................... 27 1 2 1.00 2 0 1 0 0 1 0 0
......................................................TAGGTATGACTTTTATAATAAAAAATAT......................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.........GGGCGAGTATTCATTTTTTTGTTGCA........................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0
..................................................TGGCTAGATATGACTTTTATAATAAAAAA............................................................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTGCAGTGCAGTAT................... 29 1 1 1.00 1 1 0 0 0 0 0 0
...........................TTGTTGCACAAAAAAGTGTCTATTGGCTA................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TGATTTTATATAATAATCCGTCATGGCAGA........................................................ 30 1 2 1.00 2 0 0 0 0 2 0 0
....TGCAAGGGCGAGTATT....................................................................................................................................................................... 16 0 4 1.00 4 0 0 0 4 0 0 0
..................................................TTTCTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 29 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................................TATGTTGCAGGTATCCACTTTTTG.................................................................................... 24 1 1 1.00 1 0 0 0 0 0 0 1
................................................................................ATGTTGCAGGTATCCACTTTTTGAT.................................................................................. 25 1 1 1.00 1 0 0 0 0 0 0 1
.....................................................................................GCAGGTATCCACTTTTTGATTTTATA............................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................TCAAACGCTAAAGAAATGTTGCAGTG......................... 26 1 1 1.00 1 0 0 0 1 0 0 0
..........................................................................................................................CATGCCAGACTCGATCAAACGCTAAAGAAA................................... 30 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGCCATACTCGATC................................................. 27 1 2 1.00 2 0 0 2 0 0 0 0
.......AAGGGCGAGTATTCATTTTTTTGTTGC......................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0
........................................................................TCAAAAATATGGTGCAGGTATCCACTT........................................................................................ 27 1 1 1.00 1 0 0 0 1 0 0 0
..................................................TTGCTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0
...................................CAAAAAAGTGTCTATTGGCTAGGTA............................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGCCA.......................................................... 18 0 2 1.00 2 1 0 0 1 0 0 0
...........................................................................................................................ATGCCAGACTCGATCAAACGCTAAAGAAA................................... 29 1 1 1.00 1 0 1 0 0 0 0 0
.....................................CAAAAGTGTCTATTGGCTAGGTATGACT.......................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 26 1 4 1.00 4 0 2 0 0 1 0 1
.....................................................................TAATAAAAAATATGGTGCAGGTATCCACT......................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTGATTTTATATAATAATCCGTCATG............................................................. 26 0 2 1.00 2 0 2 0 0 0 0 0
..........................................................................................TATCCACTTTTTGATTTTATATAATA....................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................ACTTTTATAATAAAAAATATGG....................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................TGTGTTGCAGGTATCCACTTTTTGA................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0
.............................GTTGCACAAAAAATTGTCTATTGG...................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................................................CGATCAAACGCTAAAGAA.................................... 18 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................CTAGGTATGACTTTTATAATAAAAAAA........................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0
.................................................TTGGCTAGGTATGACTTTTATAATAAAAAAA........................................................................................................... 31 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................TGCAGGTATCCACTTTTTGAG.................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................AATATGTTGCAGGTATCCACTTTTTGA................................................................................... 27 1 1 1.00 1 0 0 0 0 1 0 0
.................................................................................................................................GACTCGATCAAACGCTAAAGAAATGTTGC............................. 29 1 1 1.00 1 0 0 0 1 0 0 0
..................................................TGGTTAGGTATGACTTTTATAATAAAAA............................................................................................................. 28 1 3 1.00 3 0 0 0 0 0 0 3
............................TGTTGCACAAAAAAGTGTCTATTGTA..................................................................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0
.........................TTTTGTTGCACAAAAAAGTGTCTATTGGC..................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................CAAACGCTAAAGAAATGTTGCAGTGCAGTA.................... 30 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................TGCCAGACTCGATCAAACGCTAAAGAAAA.................................. 29 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................TAATAAAAAATATGATGCAGGTATCCACT......................................................................................... 29 1 1 1.00 1 0 0 0 0 1 0 0
........AGGGCGAGTATTCATTTTTTTGTT........................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0
..................................ACAAAAAAGTGTCTATTGGCTAGGTA............................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................TATGGTGCAGGTATCCACTTTTTGA................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................................AAACGCTAAAGAAATGTTGCAGTGC........................ 25 1 1 1.00 1 0 0 0 1 0 0 0
...................................CAAAAAAGTGTCTATTGGCTAGGGA............................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0
.................................................TTGGCTAGGTATGAATTTTATAATAAAAAA............................................................................................................ 30 1 1 1.00 1 1 0 0 0 0 0 0
..............................TTGCACAAAAAAGTGTCTATTGG...................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTC..................................................... 23 0 2 1.00 2 1 1 0 0 0 0 0
..........GGCGAGTATTCATTTTTTTGTTGCACA...................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1
........................................................................................................TTTTATATAATAATCCGTCATGCCAGAC....................................................... 28 0 2 1.00 2 0 0 2 0 0 0 0
..............................TTGCACAAAAAAGTGTC............................................................................................................................................ 17 0 1 1.00 1 0 0 0 1 0 0 0
............................................................................AAATATGGTGCAGGTATC............................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0
..........................................................................................................................................AAACGCTAAAGAAATGTTGCAGTGCAG...................... 27 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................................AAAGGTCATGCCAGACTCGATCAAA.............................................. 25 3 2 1.00 2 0 0 0 0 0 0 2
....................................................................................................................................TCGATCAAACGCTAAAGAAATGTTGC............................. 26 1 1 1.00 1 0 0 0 1 0 0 0
..................................................TGTCTAGGTATGACTTTTATAATAAAAAA............................................................................................................ 29 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGGCAGACTCGATC................................................. 27 1 2 1.00 2 0 0 0 0 1 0 1
............................................................................................................................................ACGCTAAAGAAATGTTGCAGTGCAGTA.................... 27 1 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................TTATATAATAATCCGTCATGCCAGA........................................................ 25 0 2 1.00 2 1 0 0 0 1 0 0
.....................................................................................................TGATTTTATATAATAATCCGTCATGGCA.......................................................... 28 1 2 1.00 2 0 0 0 0 2 0 0
..................................................TGGTTAGGTATGACTTTTATAATAAAA.............................................................................................................. 27 1 3 1.00 3 0 0 0 0 0 0 3
.....................................................CTAGGTATGACTTTTATAATAAAA.............................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
.....................................AAAAAGTGTCTATTGGCTAGGTAC.............................................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTGCAGT.......................... 22 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................CGCTAAAGAAATGTTGCAGT.......................... 20 1 1 1.00 1 0 0 0 1 0 0 0
..................................................TGGCTAGGTATGACTTTTATAATA................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
..................................................TGGCTAGGTATGACTTTTATAATAAAAAAT........................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0
...............................TGCACAAAAAAGTGTCTATTGGC..................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTTATAATAAAAAATATGGTGCAGG................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
..................................................TGGTTAGGTATGACTTTTATAATAA................................................................................................................ 25 1 3 1.00 3 0 0 0 0 1 0 2
.....................................................................................................TGATTTTATATAATAATCCGTCATGCCAGA........................................................ 30 0 2 1.00 2 1 0 0 0 1 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCGATCAAA.............................................. 30 0 2 1.00 2 2 0 0 0 0 0 0
..................................................................................................................................ACTCGATCAAACGCTAAAGAAATGTT............................... 26 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCGT................................................... 25 1 2 1.00 2 0 1 0 1 0 0 0
........AGGGCGAGTATTCATTTTTTTGTTGCACA...................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0
...............................TCCACAAAAAAGTGTCTATTGGCTAGGTA............................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0
..........GGCGAGTATTCATTTTTTTGTTGCA........................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TGATTTTATATAATAATCCGTCATGC............................................................ 26 0 2 1.00 2 1 1 0 0 0 0 0
........................................................................................................................................TCAAACGCTAAAGAAATGTTGCA............................ 23 1 1 1.00 1 0 0 0 1 0 0 0
..........................TTTGTTGCACAAAAAAGTGTCTATTGG...................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
...............................TGCACAAAAAAGTGTCTATTGGCTAG.................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0
..................................................TGGCTAGGTATGACTTTTATTATATAAAAA........................................................................................................... 30 3 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................CTCGATCAAACGCTAAAGAAATGTT............................... 25 1 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................................................TTCGATCAAACGCTAAAGAAATGTTGC............................. 27 2 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................CATGCCAGACTCGATCAAACGCTAAAGAA.................................... 29 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................CGCTAAAGAAATGTTGCAGTGCAGTAT................... 27 1 1 1.00 1 0 0 0 1 0 0 0
............................................................................................................................TGGCAGACTCGATCAAACGCTA......................................... 22 2 1 1.00 1 0 0 0 0 1 0 0
...............................TGCACAAAAAAGTGTCTATTGGCTAGGT................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTGCAGTGCAGTATT.................. 30 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................TATGACTTTTATAATAAAAAATATGGT...................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................AAAGAAATGTTGCAGTGCACG..................... 21 2 1 1.00 1 0 0 0 1 0 0 0
.............................GTTGCACAAAAAAGTGTCTATTGGC..................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................TCCGTCATGCCAGACTCGATCAAAC............................................. 25 0 2 1.00 2 0 2 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGGCAGACTCGATCAAA.............................................. 30 1 2 1.00 2 0 0 0 0 2 0 0
........AGGGCGAGTATTCATTTTTTTGTTG.......................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................TATATAATAATCCGTCATGGCAGA........................................................ 24 1 2 1.00 2 0 0 0 0 1 0 1
...............................TGCACAAAAAAGTGTCTATTGGCTA................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................AACGCTAAAGAAATGTTGCAGTGCA....................... 25 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................................................CGATCAAACGCTAAAGAAATGTTGCAGT.......................... 28 1 1 1.00 1 0 1 0 0 0 0 0
............................................................TGACTTTTATAATAAAAAATATGGTGCAGG................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................ATATGTTGCAGGTATCCACTTTTTGAT.................................................................................. 27 1 1 1.00 1 0 0 0 0 1 0 0
..................................................................TTATAATAAAAAATATGTTGCAGG................................................................................................. 24 1 1 1.00 1 0 0 0 0 1 0 0
.........................................................................................................TTTATATAATAATCCGTCATGGCAGACT...................................................... 28 1 2 1.00 2 0 0 0 0 2 0 0
............................................................TGACTTTTATAATAAAAAATATGG....................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................CGCTAAAGAAATGTTGCAGTGCAGTGT................... 27 2 1 1.00 1 0 0 0 1 0 0 0
..............................TTGCACAAAAAAGTGTCTATTGGCTAGGTA............................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0
...............................................TATTGGCTAGGTATGACTTTTA...................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
............................TGTTGCACAAAAAAGTGTCTATTTGC..................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................CGTCATGGCAGACTCGATCAAACGC........................................... 25 2 3 0.67 2 0 0 0 0 1 0 1
.........................................................................................................................TCATGGCAGACTCGATCAAACGCT.......................................... 24 2 3 0.67 2 0 0 0 0 2 0 0
.......................................................................................................................CGTCATGCCAGACTCGATCAAACGC........................................... 25 1 3 0.67 2 0 1 0 1 0 0 0
.................................CACAAAAAAGTGTCTATTGGTTAGGTA............................................................................................................................... 27 1 3 0.67 2 0 0 0 0 2 0 0
........................................................................................................................GTCATGGCAGACTCGATCAAACGCT.......................................... 25 2 3 0.67 2 0 0 0 0 1 0 1
.................................................TTGGTTAGGTATGACTTTTATAATAAA............................................................................................................... 27 1 3 0.67 2 0 0 0 0 2 0 0
......................................................TAGGTATGACTTTTATAATAAAAAAA........................................................................................................... 26 1 3 0.67 2 2 0 0 0 0 0 0
..........................................................................................................TTATATAATAATCCGTCATGGCAGA........................................................ 25 1 2 0.50 1 0 0 0 0 1 0 0
.............................................................................................................TATAATAATCCGTCATGGCAGACTCGAT.................................................. 28 1 2 0.50 1 0 0 0 0 0 0 1
..................................................................................................................TAATCCGTCATGGCAGACTCGAAA................................................. 24 3 2 0.50 1 0 0 0 0 1 0 0
...............................................................................................................TAATAAAAGGTCATGCCAGACTCGATCA................................................ 28 3 2 0.50 1 0 0 0 0 0 0 1
.........................................................................................................TTTATATAATAATCCGTCATGCCAGACT...................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................TTTTATATAATAATCCGTCATGCCA.......................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0
...........................................................................................................TATATAATAATCCGTCATGCCAGACTC..................................................... 27 0 2 0.50 1 0 0 0 0 1 0 0
.............................................................................................................TATAATAATCCGTCATGCCAGACTC..................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0
..................................................................................................................TAATCCGTCATGGCAGACTCGATCAAA.............................................. 27 1 2 0.50 1 0 0 0 0 1 0 0
...........................................................................................................TATATAATAATCCGTCATGCCAGA........................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................................TTATATAATAATCCGTCATGGCAGACTCGA................................................... 30 1 2 0.50 1 0 0 0 0 1 0 0
...............................................................................................................TAATAATCGGTCATGCCATACTCG.................................................... 24 2 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................................TGATTTTATATAATAATCCGTCATGG............................................................ 26 1 2 0.50 1 0 0 0 0 0 0 1
.....................................................................................................TGATTTTATATAATAATCCGTCGTGCCAGA........................................................ 30 1 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCGAA.................................................. 26 1 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................................TCCGTCATGGCAGACTCGATCAAA.............................................. 24 1 2 0.50 1 0 0 0 0 0 0 1
.....................................................................................................................TCCGTCATGGCAGACTCGATCAAAAA............................................ 26 3 2 0.50 1 0 0 0 0 1 0 0
...............................................................................................................................CAGACTAGATCACACGTT.......................................... 18 2 2 0.50 1 1 0 0 0 0 0 0
..................................................TGGTTAGGTATGACTTTTATAATAAAAAAT........................................................................................................... 30 1 2 0.50 1 0 0 0 0 1 0 0
.....................................................................................................................TCCGTGATGGCAGACTCGATCAAACGCT.......................................... 28 3 2 0.50 1 0 0 0 0 1 0 0
...........................................................................................................TATATAATAATCCGTCATGGCAGAC....................................................... 25 1 2 0.50 1 0 0 0 0 0 0 1
...............................................................................................................TTATAATCCGTCATGCCA.......................................................... 18 1 2 0.50 1 0 0 0 1 0 0 0
....TGCAAGGGTGAGTATTCATTTTTTTGT............................................................................................................................................................ 27 1 2 0.50 1 0 0 0 0 0 1 0
.......................................AAAGTGTCTAATGGCT.................................................................................................................................... 16 1 2 0.50 1 0 0 0 1 0 0 0
................................................................................................................AATAATCCGTCATGCCAGACTCGATC................................................. 26 0 2 0.50 1 0 0 0 0 0 1 0
...............................................................................................................TAATAATCCGTCATG............................................................. 15 0 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................................TGATTTTATATAATAATCCGTCATGCC........................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................TTTATATAATAATCCGTCATGGCAGACTC..................................................... 29 1 2 0.50 1 0 0 0 0 1 0 0
...............................................................................................................TAATAATCCGTCATGCCATACTCGAT.................................................. 26 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................TTGATTTTATATAATAATCCGTCATGC............................................................ 27 0 2 0.50 1 0 1 0 0 0 0 0
................................................................................................................AATAATCCGTCATGCCAGACTCGA................................................... 24 0 2 0.50 1 0 0 0 0 0 1 0
...............................................................................................................TAATAATCCGTCATGCCAG......................................................... 19 0 2 0.50 1 0 0 0 1 0 0 0
...............................................................................................................TAATAAAAGGTCATGCCAGACTCGATC................................................. 27 3 2 0.50 1 0 0 0 0 0 0 1
.........................................................................................................TTTATATAATAATCCGTCATGGCAGAC....................................................... 27 1 2 0.50 1 0 0 0 0 0 0 1
...............................................................................................................TAATAATCCGTCATGCCGGACTCGA................................................... 25 1 2 0.50 1 0 1 0 0 0 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCGAC.................................................. 26 1 2 0.50 1 0 0 1 0 0 0 0
...............................................................................................................TATTAATCCGTCATGCCAGACTCGATC................................................. 27 1 2 0.50 1 1 0 0 0 0 0 0
..................................................................................................................TAATCCGTCATGCCAGACTCGATCAAA.............................................. 27 0 2 0.50 1 0 0 0 0 0 1 0
...............................................................................................................TAATAATCCGTCATGCCATACTCG.................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
.............................................................................................................TATAATAATCCGTCATGCCAGA........................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0
....TGCAAGGGCGAGTATTCA..................................................................................................................................................................... 18 0 4 0.50 2 0 0 0 2 0 0 0
....TGCAAGGGCGAGTATTC...................................................................................................................................................................... 17 0 4 0.50 2 0 0 0 2 0 0 0
..........................................................................................................TTATATAATAATCCGTCATGG............................................................ 21 1 2 0.50 1 0 0 0 0 1 0 0
...............................................................................................................TAATAATCCGTCATGCCAGACTCGATCAAAA............................................. 31 1 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................TATAATAATCCGTCATGGCAGACTC..................................................... 25 1 2 0.50 1 0 0 0 0 1 0 0
........................................................................................................TTTTATATAATAATCCGTCATGCCAGACTC..................................................... 30 0 2 0.50 1 0 0 0 0 1 0 0
..............................................................................................................ATAATAATCCGTCATGCCAGACTCGA................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0
..................................................................................................................TAATCCGTCATGCCAGAC....................................................... 18 0 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................................................TCCGTCATTGCAGACTCGATCAAACGCT.......................................... 28 3 2 0.50 1 0 0 0 0 0 0 1
....................................................................................................TTGATTTTATATAATAATCCGTCATGCC........................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0
........................................................................................................................GTCATGCCAGACTCGATC................................................. 18 0 2 0.50 1 0 0 0 1 0 0 0
..........................................................................................................................CATGCCAGACTCGATC................................................. 16 0 2 0.50 1 0 0 0 1 0 0 0

Anti-sense strand reads

CAGCATTTGAGAGCAAAAAATACTGCACTGCAACATTTCTTTAACGTTTGATCGAGTCTGGCATGACGGATTATTATATAAAATCAAAAAGTGGATACCTGCACCATATTTTTTATTATAAAAGTCATACCTAGCCAATAGACACTTTTTTGTGCAACAAAAAAATGAATACTCGCCCTTGCATTTT
************************************.........((...(((((..((((((((((...((((.(((.(((((.....((((........))))..))))).))).))))..)))))))).)))))))....)).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Ovary		 SRR618934
Ovary		 SRR553487
Ovary		 SRR553486
Ovary		 M053
Female-body		 O002
Head
 SRR553488
Ovary		 M025
embryo
.....................................TCTTTAGCGTTTGATCGAGTCTGGCA............................................................................................................................ 26 1 1 36.00 36 16 4 16 0 0 0 0 0
.....................................TCTTTAGCGTTTGATCGAGTCTGGC............................................................................................................................. 25 1 1 13.00 13 7 0 4 0 1 0 1 0
.....TTTGAGAGCAAAAAATACTGCACT.............................................................................................................................................................. 24 0 3 13.00 39 8 25 2 1 3 0 0 0
...................................TTTCTTTAGCGTTTGATCGAGTCTGG.............................................................................................................................. 26 1 1 9.00 9 2 1 4 0 1 0 1 0
.....TTTGAGAGCAAAAAATACTGCACTGC............................................................................................................................................................ 26 0 3 9.00 27 10 10 3 3 1 0 0 0
.......................................TTTAGCGTTTGATCGAGTCTGGCATGA......................................................................................................................... 27 1 1 9.00 9 2 0 7 0 0 0 0 0
....................................................................................................................TATAAAAGTCATACCTAGCCAATAGA............................................. 26 0 1 7.00 7 5 0 2 0 0 0 0 0
....................................TTCTTTAGCGTTTGATCGAGTCTGGC............................................................................................................................. 26 1 1 7.00 7 0 1 5 0 0 0 0 0
...................................TTTCTTTAGCGTTTGATCGAGTCTGGC............................................................................................................................. 27 1 1 7.00 7 4 0 3 0 0 0 0 0
...................................TTTCTTTAGCGTTTGATCGAGTCTGGCA............................................................................................................................ 28 1 1 6.00 6 2 0 2 0 2 0 0 0
........................................TTAGCGTTTGATCGAGTCTGGCATGA......................................................................................................................... 26 1 1 5.00 5 0 0 1 0 0 0 0 4
...............................AACATTTCTTTAGCGTTTGATCGAGTC................................................................................................................................. 27 1 1 5.00 5 1 0 4 0 0 0 0 0
...................................................................................................................TTATAAAAGTCATACCTAGCCAATAGA............................................. 27 0 1 4.00 4 3 0 1 0 0 0 0 0
.........................................TAGCGTTTGATCGAGTCTGGCATG.......................................................................................................................... 24 1 1 4.00 4 0 0 0 0 0 0 0 4
.......................................TTTAGCGTTTGATCGAGTCTGGCATGACGGA..................................................................................................................... 31 1 1 3.00 3 3 0 0 0 0 0 0 0
.....................................TCTTTAGCGTTTGATCGAGTCTGG.............................................................................................................................. 24 1 1 3.00 3 2 0 0 0 1 0 0 0
......................................................................TTATTATATAAAATCAAAAAGTGGA............................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0 0 0
................................ACATTTCTTTAGCGTTTGATCGAGTC................................................................................................................................. 26 1 1 3.00 3 1 2 0 0 0 0 0 0
....................................TTCTTTAGCGTTTGATCGAGTCTGGCA............................................................................................................................ 27 1 1 3.00 3 0 0 3 0 0 0 0 0
...................................TTTCTTTAGCGTTTGATCGAGTC................................................................................................................................. 23 1 1 3.00 3 1 0 2 0 0 0 0 0
.........................................TAGCGTTTGATCGAGTCTGGCATGA......................................................................................................................... 25 1 1 3.00 3 0 1 2 0 0 0 0 0
..................................................................CGGATTATTATATAAAATCAAAAAGTGGA............................................................................................ 29 0 1 3.00 3 2 0 0 1 0 0 0 0
..........................................AGCGTTTGATCGAGTCTGCCATGACGGA..................................................................................................................... 28 2 2 2.50 5 0 0 0 4 0 0 1 0
..........................................AGCGTTTGATCGAGTCTGGCATGACGGA..................................................................................................................... 28 1 2 2.50 5 4 0 1 0 0 0 0 0
....................TACTGCACTGCAACATTTCTTTAGC.............................................................................................................................................. 25 1 1 2.00 2 0 0 2 0 0 0 0 0
..................................................................CGGATTATTATATAAAATCAAAAAGT............................................................................................... 26 0 4 1.25 5 2 3 0 0 0 0 0 0
...............................................................................................................................TACCTAGCCAATAGACACTTTTTTGA.................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................GCTTTAGCGTTTGATCGAGTCTG............................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0
.........................................TAGCGTTTGATCGAGTCTGGCATGACGGA..................................................................................................................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................TACCTGCACCATATTTTTTATTATAAAAGTC............................................................. 31 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................TCTTTAGCGTTTGATCGAGTATGGC............................................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0
....................................TTCTTTAGCGTTTGATCGAGTCTGGT............................................................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................TACCTAGCCAATAGACACTTTTTTG................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................TATAAAATCAAAAAGTGGATACCTGCA.................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................TTATAAAAGTCATACCTAACCAATAGA............................................. 27 1 3 1.00 3 0 0 0 3 0 0 0 0
...............................................TTGATCGAGTCTGGCATGACGGAT.................................................................................................................... 24 0 2 1.00 2 0 1 1 0 0 0 0 0
.....TTTGAGAGCAAAAAATACTGCACTG............................................................................................................................................................. 25 0 3 1.00 3 1 1 0 0 1 0 0 0
.....................................................................................................................................................TTGTGCAACAAAAAAATGAATACTCG............ 26 0 1 1.00 1 0 0 0 0 1 0 0 0
.......................................TTTAGCGTTTGATCGAGTCTGG.............................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................TTAGCGTTTGATCGAGTC................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................TAAAATCAAAAAGTGGATACCTGCAACA................................................................................. 28 1 1 1.00 1 0 0 0 0 0 0 1 0
.......................................TTTAGCGTTTGATCGAGTCTGGCA............................................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 1
..................................ATTTCGTTAGCGTTTGATCGAGTCTGGC............................................................................................................................. 28 2 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................ATACCTAGCCAATAGACACT......................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................................................................TATTATAAAAGTCATACCTAGCCAA................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................CGGATTATTATATAAAATCAAAAAG................................................................................................ 25 0 4 1.00 4 0 0 0 0 0 4 0 0
.............................................................................................................................................................CAAAAAAATGAATACTCGCCCTT....... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.......TGAGGACAAAAAATACTGCACTGCAACA........................................................................................................................................................ 28 2 3 1.00 3 2 0 1 0 0 0 0 0
.....................................TCTTTAGCGTTTGATCGAGGCTGG.............................................................................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0 0
...................................................................................TCAAAAAGTGGATACCTGCAACATATT............................................................................. 27 1 1 1.00 1 0 0 0 0 0 0 1 0
.............................................................................ATAAAATCAAAAAGTGGATACCTGCAACAT................................................................................ 30 1 1 1.00 1 0 0 0 0 0 0 1 0
.........................................................................................AGTGGATACCTGCAACATATTTTTTA........................................................................ 26 1 1 1.00 1 0 0 0 1 0 0 0 0
............................TGCAACATTTCTTTAGCGTTTGATCGAGTC................................................................................................................................. 30 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................TCTTTAGCGTTTGATCGAGTCTGGCATG.......................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................TTTAGCGTTTGATCGAGTCTGGCATG.......................................................................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 0 1
...............................AACATTTCTTTAGCGTTTGATCAAGTC................................................................................................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................TTATATAAAATCAAAAAGTGGA............................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0
.................................................................................................................TATTATAAAAGTCATACCTAGCCAATAGA............................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................ATTATAAAAGTCATACCTAGCCAATAGA............................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0
.......................................TTTAGCGTTTGATCGAGTCTGGC............................................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0 0
.....................................TCTTTAGCTTTTGATCGAGTCTGGCA............................................................................................................................ 26 2 1 1.00 1 0 0 0 0 0 0 0 1
..................................ATTTCTTTAGCGTTTGATCGAGTCTGGC............................................................................................................................. 28 1 1 1.00 1 0 0 0 0 1 0 0 0
................................ACATTTCTTTAGCGTTTGATCGAGTCTGGC............................................................................................................................. 30 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................TAAAATCAAAAAGTGGATACCTGCAA................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0
...............................AACATTTCTATAGCGTTTGATCGAGTC................................................................................................................................. 27 2 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................ATATAAAATCAAAAAGTGGA............................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0 0 0
..............................CAACATTTCTTTAGCGTTTGATCGAGTC................................................................................................................................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................................TGTGCAACAAAAAAATGAATACTCGCCCT........ 29 0 1 1.00 1 0 0 0 0 0 0 1 0
...................................TTTCTTTAGCGTTTGATCGAGTCT................................................................................................................................ 24 1 1 1.00 1 0 0 0 0 0 0 0 1
..................................ATTTCTTTAGCGTTTGATCG..................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................TAGACACTTTTTTGTGCAACAAAAAAA...................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.......TGAGGACAAAAAATACTGCACTGCAAC......................................................................................................................................................... 27 2 3 1.00 3 0 0 3 0 0 0 0 0
......................................................................................................................TAAAAGTCATACCTAGCCAATAGA............................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................TATATAAAATCAAAAAGTGGATACCTGC..................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0
.....................................TTTTTAGCGTTTGATCGAGTC................................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0
...............................AACATTTCTTTAGCGTTTGATCGAGT.................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0
...................................TTTCTTTAGCGTTTGATCGAGA.................................................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................TCAAAAAGTGGATACCTGCACCATA............................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
....................TACTGCACTGCAACATTTCTTTAGCGTT........................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0
............................................................................................................................................................ACAAAAAAATGAATACTCGCCCTT....... 24 0 1 1.00 1 0 0 0 1 0 0 0 0
..............................................................................TAAAATCAAAAAGTGGATACCTGCACCA................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................TATTATATAAAATCAAAAAGCGGAT........................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0
....................................TTCTTTAGCGTTTGATCGAGTCTGG.............................................................................................................................. 25 1 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................................ATATAAAATCAAAAAGTGGAT........................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................TTCTTTTAGCGTTTGATCGAGTCTGGCA............................................................................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................TTATAAAAGTCATATTTAGCCAATAGA............................................. 27 2 1 1.00 1 1 0 0 0 0 0 0 0
.....TTTGAGGACAAAAAATACTGCACTGC............................................................................................................................................................ 26 2 3 0.67 2 2 0 0 0 0 0 0 0
........................................................TCTGGCATGACCTTTTATTATATAAAATC...................................................................................................... 29 3 3 0.67 2 0 0 0 1 0 0 1 0
...............................................................TGACGGATTATTATATAAAATCAAAA.................................................................................................. 26 0 2 0.50 1 0 0 1 0 0 0 0 0
...................................................TCGAGTCTGGCATGACGGATT................................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
.............................................GTTTGATCGAGTCTGGCA............................................................................................................................ 18 0 2 0.50 1 0 1 0 0 0 0 0 0
..............................................TTTGATCGAGTCTGGCATGACG....................................................................................................................... 22 0 2 0.50 1 0 0 0 0 0 0 0 1
...............................................................TGACGGATTATTATATAAAATCAAAAAG................................................................................................ 28 0 2 0.50 1 0 0 1 0 0 0 0 0
..........................................................TGGCATGACGGATTATTATATAAAA........................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................CTTTGATCGAGTCTGGCATGCC........................................................................................................................ 22 2 2 0.50 1 0 0 0 0 0 0 0 0
..............................................TTTGATCGAGTCTGGCATGACGGA..................................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0 0
...........................CGTCAACATTTCTTTAACGT............................................................................................................................................ 20 2 2 0.50 1 0 0 0 0 0 0 0 0
.............................................GTTTGATCGAGTCTGGCATGA......................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.......TGAGAGCAAAAAATACT................................................................................................................................................................... 17 0 3 0.33 1 0 1 0 0 0 0 0 0
.....TTTGAGAGCAAAAAATAC.................................................................................................................................................................... 18 0 3 0.33 1 0 1 0 0 0 0 0 0
.............................................................................................................TTTTTATTATAAAAGTCATACCTAACCA.................................................. 28 1 3 0.33 1 0 0 0 0 0 0 1 0
.....TTTGAGGACAAAAAATACTGCACTGCAA.......................................................................................................................................................... 28 2 3 0.33 1 1 0 0 0 0 0 0 0
......TTGAGAGCAAAAAATACTGCACT.............................................................................................................................................................. 23 0 3 0.33 1 0 1 0 0 0 0 0 0
.......TGAGGACAAAAAATACTGCACTGCAACATT...................................................................................................................................................... 30 2 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................TACCTAACCAATAGACACTTTTTTGT.................................. 26 1 3 0.33 1 0 0 0 1 0 0 0 0
.......TGAGGACAAAAAATACTGCACTGCA........................................................................................................................................................... 25 2 3 0.33 1 0 0 1 0 0 0 0 0
.....TTTGAGAGCAAAAAATACTGCACTGCCT.......................................................................................................................................................... 28 2 3 0.33 1 0 0 0 1 0 0 0 0
..............................................TTTGATCGAGTCTGGCATGATGGCT.................................................................................................................... 25 2 3 0.33 1 0 0 1 0 0 0 0 0
.......................................................................................................................AAAAGTCATACCTAACCAATAGACACT......................................... 27 1 3 0.33 1 0 0 0 1 0 0 0 0
.....TTTGAGAGCAAAAAATACTGCACC.............................................................................................................................................................. 24 1 3 0.33 1 0 1 0 0 0 0 0 0
.....TTTGAGAGCAAAAAATACTGC................................................................................................................................................................. 21 0 3 0.33 1 0 0 0 1 0 0 0 0
......................................................................................................................................................TGTGCAACAAAAAAATGAA.................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................AAAAAATGAATACTCGC........... 17 0 3 0.33 1 0 1 0 0 0 0 0 0
.....TTTGAGGACAAAAAATACTGCACTGCAAC......................................................................................................................................................... 29 2 3 0.33 1 1 0 0 0 0 0 0 0
.......TGAGAGCAAAAAATACTGCACTGCAAC......................................................................................................................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0 0
......CGCAGAGCAAAAAATACTGCACT.............................................................................................................................................................. 23 3 4 0.25 1 0 1 0 0 0 0 0 0
...........................................................................ATATAAAATCAAAAAGT............................................................................................... 17 0 5 0.20 1 0 1 0 0 0 0 0 0
..............AAAAAATACTGCACT.............................................................................................................................................................. 15 0 6 0.17 1 0 1 0 0 0 0 0 0
.......................................................GTATGGCATGACGGAT.................................................................................................................... 16 1 9 0.11 1 0 1 0 0 0 0 0 0
.................................................................................................CCTGAACCATATTTTT.......................................................................... 16 1 9 0.11 1 0 0 1 0 0 0 0 0
.................................................................................................CCTGAACCATATTTT........................................................................... 15 1 17 0.06 1 0 0 0 0 0 0 1 0
......................................CTTTAACGTTTGAGC...................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim3 3L:22502423-22502609 + dsi_58 AAA--ATGCAAGGGCGAGTA-----T-TCATTTTTTTGTTGCACAAAAAAG-TGTCTATTGGCTAGGTATGACTTTTATAATAAAAAATATGGTGCAGGTATCCACT-TTTTGATTTTATAT------------AATAATCCGTCATGCCAGACTCGATCAAACGTTA----------AAGAAATGTTGCAGTGCAGTATTTTTTGCTCTCAAATGCTG
droSec2 scaffold_51:25386-25582 + AAA--ATACAAGGGCGAGTA-----T-TCAATTTTTTGTTGCACATAAAAG-TGTCTATTGGTTAGGTATGACTTTAATAATAAAAAATATGGTGCAGGTAACCACT-TTTTGGTTTTATAT------------AATAATCCGTCATGCCAGACTCGATCAAACGCTTGTTGAACGTAAAGAAATGTTGCAGTGCAGTATTTTTTACTCTCAAATGCTG
dm3 chr2RHet:3152401-3152596 + AAA--ATGCACGGGCGAGTA-----T-TCATTTTTTTGATGCATGTAAAAG-TGTCTATTGGCTAAGTAAGACTTTAATAATAAAAAATATGGTGCAGGTGACCACT-TTTTGATTTTATAT------------AATAAGCCGTCATGCCAGACTCGATCAAACGCTTGTTAAACGTCAAGTAATGTTGCAGTGCAGTATTT-TTGCTCTCAAATGCTG
droEre2 scaffold_4929:23040764-23040960 - AAA--ATGCAAGGGCGAGTA-----T-TCATTTTTTTGTTGCACGTAAAAG-TGTCTATTGGTTAAGTATGACTTTAATAATAAAAAATATGGAGCAGGTAACCACT-TTTTGATTTTATAT------------AATAAGCCGTCATGCCAGACTCGATCAAACTCTTGTTGAACGTCAAGAAATGTTGCAGTGCAGTATTTTTTGTTCTCAAATGCTT
droYak3 v2_chrUn_120:77083-77279 + AGT--AAACAACGACGAGGA-----T-TCATTTTTTTGTTGCTCGTAAAAG-TGTCTATTTGTTAGGTATGACTTTAATAATAAGAAATATGGTGCAGGTAGCCACT-TTTTAATTTTATAT------------AATAATCCATTGTGCCAGACTCGATCAAACGCTTGTTGAACATCAAGAAATGTTGCACTGCAGTACTTTTTGTTCTCAAAAGCTA
droEug1 scf7180000409499:4549-4745 + AAG--AAGTAACGTTGATGA-----A-TCGTTTTTCTGCTGCTCGTAAAAG-CATCTTTTATTAAGATATGATTTGATTATTAAGTAATACGGAGAAGGTAGAAATT-TTTTTATTTTGTAC------------AATAAACCTTTGTGCCAGACTCGATCAAACGCTTGTTGAACGTCAAGAAATGCAGCTGTGCAGTATTCTTTGTTCTCAAATGCAG
droBia1 scf7180000301347:24539-24735 + GTT--ATGTTTAGCTGACAT-----G-GAAGTATTGCATTTCATAACAAAT-ATCATGTTGCAAAGATATGACTTCAAGAGTTAATGCGTGTTATTAGGGAGCATTA-TTTTGATTTTATGC------------AATAAGCCGTTAAGCCATATTCTGTCGAATGCTTAATAGACGTCCAAAAATACCGCAGTGCAGTATTCCCTATTTTCAAACGCAC
droTak1 scf7180000413869:219-425 - ACT--AT----TGAAGAAGA-----CTCCTTCTTTTTGATGAACGTAGAAG-CAACGTTTATCGAGATACGATTTTAGCAGCAAATAGTATGGTGCAGGCAGCCTATTTTTTTATTTTATAAGCCTATATTATTTGTAAGCCTATATGCCATACTCTATCAAACGCTTGCTGAACGTCAAGAAATGCAGCAGTGCAGTATTCTTTACACTCAAATGCTG
droEle1 scf7180000491113:34067-34263 + GTT--TACTATTGAAGAAGA-----C-TCCTCTTTTTGATGAACGTAGAAT-CAGCGTTTATCGAGATACGATTTTAGCAGCAAATAGTATGGTGCAGGCAGCCATT-TTTTTATTTTATAT------------AGTAAGCCTTTATGCCATACTCTATCAAACGCTTGCTGAACGTCAAGAAATGCAGCAGTGCAGTATTCTTTACACTCAAATGCTG
droRho1 scf7180000777805:7320-7507 + GAG--AAGTTGTGTTGACGT-----A-TAATTTCTCTGCTTCACGTAGAAG-CCTCTCTTAGACAAATAGGATCTCAGTAGTAAATAGTAGGGAGCAGGTAGCCATT-TCTTTATCTTATAG------------AGTAATCCGTTGTGCCAAACACGAACA---------TGAACATCAGGAAATGTAGTAGTACAGTATTTTTTGTTCTCAAGTGCGG
droFic1 scf7180000454069:247236-247432 - GAG--AAGTAGTGTTGACGT-----T-TCATTTCTCTGCTGCACGTAGAAG-CATCTGTCAGACAAGTAGGATTTCAGTAATAGATAGTATGGGGCAGGTAGCCATT-TCTTTATCTTGTAG------------AGTAATCCATTGTGCCAAACACGATCAAACGCTTGTTGAACATCAAGAAACGTAGCAGTACAATATTTTTTGTTCTCAAATGCAG
droKik1 scf7180000301601:10232-10428 - GAG--AAGTAGTGATGACGC-----G-TCACTTCTCTGCTGAACGTAGAAG-CATCTTTTGGACAAATAGGATCTCAGTAGTAAATAGTATGGTGCAGGTAGCCATT-TCTTTATCTTATAG------------AGTAATCCATTGTGCCAAACACGATCAAACGCTTGTTGAACATCAAGAAATGTGGCAGTACAGTATTTTTTGGTCTCAAATGCGG
droAna3 scaffold_12671:18616-18812 - AAG--AAGTAACGTAGATGA-----A-TCGTTTTTCTGCTGCACGTAAAAG-CATCTTTTATTAAGATATGATTTAATTATTAAGTAATACGGAGCAGGTAGCAATT-TTTTTATCTTGTAC------------AATAAACCTTTGTGCCAGACTCGATCAAACGCTTGTTGCACGTCAAGAAATGCAGCTGTGCAGTATTTTTTGTTCTCAAATGCAG
droBip1 scf7180000396425:323113-323308 - AAG--AAGTAACGTAGATGA-----A-TCGTTTTTCTGCTGCACGTAAAAG-CATCTTTTATTAAGATATGATTTAATTATTAAGTAATACGGAGCAGGTAGCAATT-T-TTTATCTTGTAC------------AATAATCCTTTGTGCCAGACTCGATCAAACGCTTGTTGAACGTCAAGAAATGCAGCTGTGCAGTATTTTTTGTTCTCAAATGCAG
dp5 Unknown_singleton_2120:10430-10631 - ATC--CTTCCAGGTCTCGAGCGTATT-CCATTGTTTCCGTTTACAATAAAT-GTTCTATCTGCTAAGTAACTTTTTAAAACGTTGTAATATGTAAACGGGAGTAGCT-TCGCTAGCTTAAGT------------AGTAGACCATTATGCCAAACTCGGTCAAAGGCTTCGCTCACGTCGATAAATACAGCAGAACAAAATAACTGTTTCTCATATGCAT
droPer2 scaffold_1570:6943-7144 - AAATCCTTCCAGGTCTCGAGCGTATT-CCATTGTTTCCGTTTACAAAAAATTTTTCTATCTGCTAAGTAACTTTTTAAAACGTTGTAATATGTAAACGGGAGTAGCT-TCGCTAGCTTAAGT------------AGGAGACCATTATGCCAAACTCGGTCAAAGGCTTCGCTCACGTCAATAAATACGGCAGAACAAAATAACTGTTTCTCATATG---
droWil2 scf2_1100000004615:11657-11853 - AGT--AAAGGCATTTGAAAT-----T-TCTCCTTGTTGTCGAACATAAAAA-TGTCTGTTGCCAAGATAAGACTTTAATAATAGATAGTAAGGAGCAGGAAGCCATT-TTTTTATTTTATAC------------AGAATGCCATCGTGCCATACTCGGTCAAACGCTTGCTGCACACCAAGGAAAACTACGGAGCAGTATTCCTTATTTTCAAGAGCAT
droVir3 scaffold_12958:1929638-1929831 - GGA--AAGCAATGGCGACGA-----T-TCACTTTTTTGCTGCACGCAGAAG-CATAGTTTACCCAAATACAACTTAAA---TAAATAGTTTGGTGTAGGTTGCCACT-TCTATATTTTATAT------------AATATACCGCTGTGCCAAACGCTATAAAATGCTTTTTGAACGTGAAGATATGCTGCAGTACAATATTTTTTGTTTTCAAAAGCTG
droMoj3 scaffold_6496:26001080-26001275 - AGT--GCATATAGTGGACGA-----T-TCATCCTGTTCTTGAACATAGAAT-ATCCTGTTTTCTAAGTAGGATTTTATTATTAAGAAGTACGGAGCGGACAACCCTT-TTTTAATTTTGTAC------------AGCAGTCCTACATGCCACACTCTATCGAAGGCCTATTTGACATCCAAAAATACTCCAGTGCAATATTT-TTGCTTTAAAACGCAT
droGri2 scaffold_7051:2560-2760 + AGATTATGCCTGGCCTAGACCT---C-ACACCTCCAGTGTTGACGACAAAG-CTACGATCGCTCAAATAGCTCCGGAGAACTCTATACAAAGTTGGCGGCAACAACC-TGATCAACTTATAC------------AGAAGTCCTACATGCCACACTCTGTCAAACGCTTCGCTGATGTCAATGAATACAGCAGAGCAATACTGTCGCTTCTCATAAGCAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim3
AAA--ATGCAAGGGCGAGTA-----T-TCATTTTTTTGTTGCACAAAAAAG-TGTCTATTGGCTAGGTATGACTTTTATAATAAAAAATATGGTGCAGGTATCCACT-TTTTGATTTTATAT------------AATAATCCGTCATGCCAGACTCGATCAAACGTTA----------AAGAAATGTTGCAGTGCAGTATTTTTTGCTCTCAAATGCTGSizeHit CountTotal NormTotalV044
Embryo		M023
Head		M024
Male-body		M025
Embryo		O001
Testis		O002
Head		M053
Female-body		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary
.........................................................................................................................T------------AATAATCCGTCATGCCAGACTCGA.............................................................25286.001720008300104322824
.......................................TGCACAAAAAAG-TGTCTATTGGCTAGGTA......................................................................................................................................................29165.00650000000650000
...........................................................TGGCTAGGTATGACTTTTATAATAAAAAA...................................................................................................................................29146.004600000003201400
..............................................................CTAGGTATGACTTTTATAATAAAAAA...................................................................................................................................26129.00290000000402500
...........................................................TGGCTAGGTATGACTTTTATAATAAA......................................................................................................................................26127.00270000000200700
....................................TGTTGCACAAAAAAG-TGTCTATTGGC............................................................................................................................................................26127.00270000001140903
.........................................................................................................................T------------AATAATCCGTCATGCCAGACTCGAT............................................................26225.005000020001901415
..........AGGGCGAGTA-----T-TCATTTTTTTGTTGCA................................................................................................................................................................................27123.0023000000076460
.......................................TGCACAAAAAAG-TGTCTATTGGCTAGG........................................................................................................................................................27119.00190000000190000
.........................................................................................................................T------------AATAATCCGTCATGCCAGACTCGATC...........................................................27218.00360001500680304
...........................................................TGGCTAGGTATGACTTTTATAATAAAAA....................................................................................................................................28115.0015000000080700
...............................................................TAGGTATGACTTTTATAATAAAAAA...................................................................................................................................25114.0014000000042710
..........................................................TTGGCTAGGTATGACTTTTATAATAAA......................................................................................................................................27112.0012000000070410
..........................................................TTGGCTAGGTATGACTTTTATAATAAAAAA...................................................................................................................................30112.00120000000110100
...........................................................TGGCTAGGTATGACTTTTATAATAAAA.....................................................................................................................................27112.0012000100060410
...................................TTGTTGCACAAAAAAG-TGTCTATTGGC............................................................................................................................................................27111.0011000000020801
......TGCAAGGGCGAGTA-----T-TCATTTTTTTGT....................................................................................................................................................................................2718.008000000110204
.................................................................................TAAAAAATATGGTGCAGGTATCCACT-...............................................................................................................2617.007000000050200
......TGCAAGGGCGAGTA-----T-TCATTTTTTTG.....................................................................................................................................................................................2617.007000000010402
..................................TTTGTTGCACAAAAAAG-TGTCTATTGGC............................................................................................................................................................2815.005000000020300
......TGCAAGGGCGAGTA-----T-TCATTTTTTT......................................................................................................................................................................................2535.0015000000221703
...............................................................TAGGTATGACTTTTATAATAAAAAATA.................................................................................................................................2714.004000000031000
......................................................................................................................................................................TA----------AAGAAATGTTGCAGTGCAGTATT..................2514.004000000010102
...............................TTTTTTGTTGCACAAAAAAG-TGTCTA.................................................................................................................................................................2614.004000000000211
.......................................TGCACAAAAAAG-TGT....................................................................................................................................................................1523.507000000000700
...............................................................TAGGTATGACTTTTATAATAAAAA....................................................................................................................................2413.003000000010200
.........AAGGGCGAGTA-----T-TCATTTTTTTGTTGCA................................................................................................................................................................................2813.003000000020100
..........................................................TTGGCTAGGTATGACTTTTATAATAAAA.....................................................................................................................................2813.003000000020100
.......................................TGCACAAAAAAG-TGTC...................................................................................................................................................................1613.003000000000003
.....................................................................TGACTTTTATAATAAAAAATATGGTGCA..........................................................................................................................2813.003000000030000
...................................................................TATGACTTTTATAATAAAAAATATGG..............................................................................................................................2613.003000000100200
...........................................................................................................................................TCCGTCATGCCAGACTCGATCAAACG......................................................2613.003000000030000
..............................................................CTAGGTATGACTTTTATAATAAAAAATA.................................................................................................................................2813.003000000000300
..................................................................................................................TTTTATAT------------AATAATCCGTCATGCCAGA..................................................................2723.006000000040200
.............GCGAGTA-----T-TCATTTTTTTGT....................................................................................................................................................................................2013.003000000000003
...........................................................TGGCTAGGTATGACTTTTATAATAA.......................................................................................................................................2513.003000000010200
.........................................................................................................................T------------AATAATCCGTCATGCC.....................................................................1722.505000000000005
.........................................................................................................................T------------AATAATCCGTCATGCCAGACTCG..............................................................2422.505000000000302
...................................TTGTTGCACAAAAAAG-TGTCTATTGG.............................................................................................................................................................2612.002000000000200
.........................................................................................................................T------------AATAATCCGTCATGCCAGACT................................................................2222.004000000030010
..........................................................TTGGCTAGGTATGACTTTTATAATAAAAA....................................................................................................................................2912.002000000020000
.........AAGGGCGAGTA-----T-TCATTTTTTTGT....................................................................................................................................................................................2412.002000000000200
................................TTTTTGTTGCACAAAAAAG-TGTCTA.................................................................................................................................................................2512.002000000000200
............................................................................TATAATAAAAAATATGGTGCAGGTA......................................................................................................................2512.002000000000200
................................................AAG-TGTCTATTGGCTAGGTA......................................................................................................................................................2012.002000000000002
......................................TTGCACAAAAAAG-TGTCTATTGGC............................................................................................................................................................2412.002000000000200
.........................................................................................................................T------------AATAATCCGTCATGCCAGA..................................................................2022.004000000020101
.........................................................................................................................T------------AATAATCCGTCATGCCAGACTCGATCA..........................................................2822.004000000300001
....................................TGTTGCACAAAAAAG-TGTC...................................................................................................................................................................1912.002000000000002
.................................TTTTGTTGCACAAAAAAG-TGTCTA.................................................................................................................................................................2412.002000000010001
..........AGGGCGAGTA-----T-TCATTTTTTTGTTGC.................................................................................................................................................................................2612.002000000001010
.......................................................................................................................TAT------------AATAATCCGTCATGCCAGACTCGA.............................................................2722.004000200000002
.....................................................................................................................TATAT------------AATAATCCGTCATGCCAGACT................................................................2622.004000100010011
......................................................................................................................................................................TA----------AAGAAATGTTGCAGTGCAGTA....................2312.002000000000002
...................................................................................................................TTTATAT------------AATAATCCGTCATGCCAGA..................................................................2621.503000000030000
......TGCAAGGGCGAGTA-----T-TCATTTTTT.......................................................................................................................................................................................2431.334000000010300
.............................................................................................TGCAGGTATCCACT-TTTTGATTTTATA..................................................................................................2711.001000000000100
........................................................TATTGGCTAGGTATGACTTTTATAATAAAA.....................................................................................................................................3011.001000000010000
................................................................................................AGGTATCCACT-TTTTGATTTTATA..................................................................................................2411.001000000000010
..........................................................TTGGCTAGGTATGACTTTTATAAT.........................................................................................................................................2411.001000000000100
...............................................AAAG-TGTCTATTGGCTAGGTATGACT.................................................................................................................................................2611.001000000010000
..............................................AAAAG-TGTCTATTGGCT...........................................................................................................................................................1711.001000000000001
............................................AAAAAAG-TGTCTATTGGCTAGGTA......................................................................................................................................................2411.001000000010000
.......................................TGCACAAAAAAG-TGTCT..................................................................................................................................................................1711.001000000000001
..............................TTTTTTTGTTGCACAAAAAAG-TGTCTA.................................................................................................................................................................2711.001000000001000
.............GCGAGTA-----T-TCATTTTTTTG.....................................................................................................................................................................................1911.001000000000001
..............................................................CTAGGTATGACTTTTATAATAAAAA....................................................................................................................................2511.001000000000100
..............................................................CTAGGTATGACTTTTATAATAAAAAAT..................................................................................................................................2711.001000000000100
.............................................................................................TGCAGGTATCCACT-TTTTGATTT......................................................................................................2311.001000000001000
.....................................................GTCTATTGGCTAGGTA......................................................................................................................................................1611.001000000000001
..........................................................TTGGCTAGGTATGACTTTTATAATAA.......................................................................................................................................2611.001000000000100
..........................................................................................TGGTGCAGGTATCCACT-TTTTGAT........................................................................................................2411.001000000100000
...............................................................TAGGTATGACTTTTATAATAAAAAATAT................................................................................................................................2811.001000000010000
...........GGGCGAGTA-----T-TCATTTTTTTGTTGCA................................................................................................................................................................................2611.001000000001000
...................................TTGTTGCACAAAAAAG-TGTCTATTGGCTA..........................................................................................................................................................2911.001000000010000
......TGCAAGGGCGAGTA-----T-T...............................................................................................................................................................................................1641.004000000000004
..............................................................................................GCAGGTATCCACT-TTTTGATTTTATA..................................................................................................2611.001000000000100
.........AAGGGCGAGTA-----T-TCATTTTTTTGTTGC.................................................................................................................................................................................2711.001000000000001
...........................................CAAAAAAG-TGTCTATTGGCTAGGTA......................................................................................................................................................2511.001000000010000
.........................................................................................................................T------------AATAATCCGTCATGCCA....................................................................1821.002000000010001
..............................................................................TAATAAAAAATATGGTGCAGGTATCCACT-...............................................................................................................2911.001000000010000
..............................................................................................................TTGATTTTATAT------------AATAATCCGTCATG.......................................................................2621.002000000000200
...................................................................................................TATCCACT-TTTTGATTTTATAT------------AATA.................................................................................2611.001000000010000
.......................................................................ACTTTTATAATAAAAAATATGG..............................................................................................................................2211.001000000000100
.................................TTTTGTTGCACAAAAAAG-TGTCTATTGGC............................................................................................................................................................2911.001000000010000
..........AGGGCGAGTA-----T-TCATTTTTTTGTT...................................................................................................................................................................................2411.001000000001000
..........................................ACAAAAAAG-TGTCTATTGGCTAGGTA......................................................................................................................................................2611.001000000010000
........................................................................................TATGGTGCAGGTATCCACT-TTTTGA.........................................................................................................2511.001000000000100
......................................TTGCACAAAAAAG-TGTCTATTGG.............................................................................................................................................................2311.001000000000001
.........................................................................................................................T------------AATAATCCGTCATGCCAGACTC...............................................................2321.002000000010100
............GGCGAGTA-----T-TCATTTTTTTGTTGCACA..............................................................................................................................................................................2711.001000000000010
..................................................................................................................TTTTATAT------------AATAATCCGTCATGCCAGAC.................................................................2821.002000200000000
......................................TTGCACAAAAAAG-TGTC...................................................................................................................................................................1711.001000000000001
.....................................................................................AAATATGGTGCAGGTATC....................................................................................................................1811.001000000000001
....................................................................................................................TTATAT------------AATAATCCGTCATGCCAGA..................................................................2521.002000000011000
..............................................................CTAGGTATGACTTTTATAATAAAA.....................................................................................................................................2411.001000000000100
...........................................................TGGCTAGGTATGACTTTTATAATA........................................................................................................................................2411.001000000000100
...........................................................TGGCTAGGTATGACTTTTATAATAAAAAAT..................................................................................................................................3011.001000000010000
.......................................TGCACAAAAAAG-TGTCTATTGGC............................................................................................................................................................2311.001000000010000
..........................................................................TTTATAATAAAAAATATGGTGCAGG........................................................................................................................2511.001000000010000
...............................................................................................................TGATTTTATAT------------AATAATCCGTCATGCCAGA..................................................................3021.002000000011000
.........................................................................................................................T------------AATAATCCGTCATGCCAGACTCGATCAAA........................................................3021.002000000020000
..........AGGGCGAGTA-----T-TCATTTTTTTGTTGCACA..............................................................................................................................................................................2911.001000000000100
............GGCGAGTA-----T-TCATTTTTTTGTTGCA................................................................................................................................................................................2511.001000000010000
...............................................................................................................TGATTTTATAT------------AATAATCCGTCATGC......................................................................2621.002000000010100
..................................TTTGTTGCACAAAAAAG-TGTCTATTGG.............................................................................................................................................................2711.001000000010000
.......................................TGCACAAAAAAG-TGTCTATTGGCTAG.........................................................................................................................................................2611.001000000000001
.......................................TGCACAAAAAAG-TGTCTATTGGCTAGGT.......................................................................................................................................................2811.001000000010000
...................................................................TATGACTTTTATAATAAAAAATATGGT.............................................................................................................................2711.001000000010000
.....................................GTTGCACAAAAAAG-TGTCTATTGGC............................................................................................................................................................2511.001000000010000
...........................................................................................................................................TCCGTCATGCCAGACTCGATCAAAC.......................................................2521.002000000000200
..........AGGGCGAGTA-----T-TCATTTTTTTGTTG..................................................................................................................................................................................2511.001000000000100
.......................................TGCACAAAAAAG-TGTCTATTGGCTA..........................................................................................................................................................2511.001000000010000
.....................................................................TGACTTTTATAATAAAAAATATGGTGCAGG........................................................................................................................3011.001000000010000
.....................................................................TGACTTTTATAATAAAAAATATGG..............................................................................................................................2411.001000000000100
......................................TTGCACAAAAAAG-TGTCTATTGGCTAGGTA......................................................................................................................................................3011.001000000010000
........................................................TATTGGCTAGGTATGACTTTTA.............................................................................................................................................2211.001000000010000
...................................................................................................................TTTATAT------------AATAATCCGTCATGCCAGACT................................................................2820.501000000010000
..................................................................................................................TTTTATAT------------AATAATCCGTCATGCCA....................................................................2520.501000000000100
.....................................................................................................................TATAT------------AATAATCCGTCATGCCAGACTC...............................................................2720.501000000001000
.......................................................................................................................TAT------------AATAATCCGTCATGCCAGACTC...............................................................2520.501000000000100
.....................................................................................................................TATAT------------AATAATCCGTCATGCCAGA..................................................................2420.501000000010000
......................................................................................................................................AATAATCCGTCATGCCAGACTCGATC...........................................................2620.501000000100000
.........................................................................................................................T------------AATAATCCGTCATG.......................................................................1520.501000000000001
...............................................................................................................TGATTTTATAT------------AATAATCCGTCATGCC.....................................................................2720.501000000010000
..............................................................................................................TTGATTTTATAT------------AATAATCCGTCATGC......................................................................2720.501000000000100
......................................................................................................................................AATAATCCGTCATGCCAGACTCGA.............................................................2420.501000000100000
.........................................................................................................................T------------AATAATCCGTCATGCCAG...................................................................1920.501000000000001
........................................................................................................................................TAATCCGTCATGCCAGACTCGATCAAA........................................................2720.501000000100000
.......................................................................................................................TAT------------AATAATCCGTCATGCCAGA..................................................................2220.501000000000100
......TGCAAGGGCGAGTA-----T-TCA.............................................................................................................................................................................................1840.502000000000002
......TGCAAGGGCGAGTA-----T-TC..............................................................................................................................................................................................1740.502000000000002
..................................................................................................................TTTTATAT------------AATAATCCGTCATGCCAGACTC...............................................................3020.501000000001000
........................................................................................................................AT------------AATAATCCGTCATGCCAGACTCGA.............................................................2620.501000100000000
........................................................................................................................................TAATCCGTCATGCCAGAC.................................................................1820.501000000000001
..............................................................................................................TTGATTTTATAT------------AATAATCCGTCATGCC.....................................................................2820.501000000000100
..............................................................................................................................................GTCATGCCAGACTCGATC...........................................................1820.501000000000001
................................................................................................................................................CATGCCAGACTCGATC...........................................................1620.501000000000001
droSec2
AAA--ATACAAGGGCGAGTA-----T-TCAATTTTTTGTTGCACATAAAAG-TGTCTATTGGTTAGGTATGACTTTAATAATAAAAAATATGGTGCAGGTAACCACT-TTTTGGTTTTATAT------------AATAATCCGTCATGCCAGACTCGATCAAACGCTTGTTGAACGTAAAGAAATGTTGCAGTGCAGTATTTTTTACTCTCAAATGCTGSizeHit CountTotal NormTotalV113
Male-body		V114
Embryo		V115
Head		M054
Female-body
.........................................................................................................................................................................TTGAACGTAAAGAAATGTTGCAGTGC........................26131.003132152
.........................................................................................................................................................................TTGAACGTAAAGAAATGTTGCAGTG.........................25121.002109111
.........................................................................................................................................................................TTGAACGTAAAGAAATGTTGCAGT..........................24119.001908011
........................................................TATTGGTTAGGTATGACTTTAATA...........................................................................................................................................2435.671707010
......TACAAGGGCGAGTA-----T-TCAATTTTT.......................................................................................................................................................................................2414.0040004
......TACAAGGGCGAGTA-----T-TCAATTTTTTGT....................................................................................................................................................................................2712.0020002
.............................................................................................................................................CGTCATGCCAGACTCGATCAAACGC.....................................................2512.0020002
.........................................................................................................................................................................TTGAACGTAAAGAAATGTTGCAGTGCA.......................2712.0020002
.........................................................................................................................................................................TTGAACGTAAAGAAATGTTGCAGTGCAG......................2812.0020002
.........................................................................................................................................................................TTGAACGTAAAGAAATGTTGCAG...........................2312.0020101
............................................................................................................................................CCGTCATGCCAGACTCGATCAAACGC.....................................................2611.0010001
.......................................................................................................................TAT------------AATAATCCGTCATGCCAGACTCGA.............................................................2711.0010001
...........................................................................................................................................TCCGTCATGCCAGACTCGATCAA.........................................................2311.0010100
........................................................TATTGGTTAGGTATGACTTTAATAA..........................................................................................................................................2531.0030003
..............................................................................................................TTGGTTTTATAT------------AATAATCCGTCATGCC.....................................................................2811.0010001
............................................................................................................TTTTGGTTTTATAT------------AATAATCCGT...........................................................................2411.0010001
.......................................................................................................................TAT------------AATAATCCGTCATGCCAGACT................................................................2411.0010001
.............................................................................................................................................CGTCATGCCAGACTCGATCAAACGCT....................................................2611.0010001
...................................................................................................................TTTATAT------------AATAATCCGTCATGCCAGACT................................................................2811.0010001
..........................................................................................................................................................................................TTGCAGTGCAGTATTTTTTACTCTCAAA.....2811.0010001
.....................................................................................................................................................................CTTGTTGAACGTAAAGAAATGTTGC.............................2511.0010001
.......ACAAGGGCGAGTA-----T-TCAATTT.........................................................................................................................................................................................2111.0010001
.........................................................................................................................................................................TTGAACGTAAAGAAATGTTGC.............................2111.0010100
...........................................................................................................................................TCCGTCATGCCAGACTCGATCAAACGC.....................................................2711.0010001
................................................................................................................................................................................TAAAGAAATGTTGCAGTGCAGTATT..................2511.0010100
........................................................TATTGGTTAGGTATGACTTTAAT............................................................................................................................................2331.0030102
.....................................................................................................................TATAT------------AATAATCCGTCATGCCAGACTC...............................................................2711.0010100
......TACAAGGGCGAGTA-----T-TCAATTTT........................................................................................................................................................................................2311.0010001
........................................................................................................................................................................GTTGAACGTAAAGAAATGTTGCAGTGC........................2711.0010100
........................................................................................................................................................................................TGTTGCAGTGCAGTATTTTTTACTC..........2511.0010001
........................................................TATTGGTTAGGTATGACTTTAATAATA........................................................................................................................................2721.0020101
...........................................................................................................................................TCCGTCATGCCAGACTCGATCAAACG......................................................2611.0010100
........................................................................................TATGGTGCAGGTAACCACT-TTTTGGT........................................................................................................2611.0010001
........................................................................................................................................TAATCCGTCATGCCAGACTCGATCAAA........................................................2711.0010001
.............................................................................................................................................................................ACGTAAAGAAATGTTGCAGTGC........................2211.0010001
.............................................................................................................................................................................ACGTAAAGAAATGTTGCAGTGCAG......................2411.0010100
....................................................................................................................TTATAT------------AATAATCCGTCATGCCAGACT................................................................2711.0010001
...................................................................................................................TTTATAT------------AATAATCCGTCATGCCAGA..................................................................2611.0010001
..............CGAGTA-----T-TCAATTTTTTGTTGCACA..............................................................................................................................................................................2511.0010100
..................................................................................................................................................TGCCAGACTCGATCAAACGCTTG..................................................2330.6720011
.............................................TAAAAG-TGTCTATTGGTTAGGTA......................................................................................................................................................2320.5010001
........................................................TATTGGTTAGGTATGACTTTAATAAT.........................................................................................................................................2620.5010100
..................................................................................................................................................TGCCAGACTCGATCAAACGCTTGT.................................................2430.3310100
...............................................................................................................................................TCATGCCAGACTCGATCAAACGCTTG..................................................2630.3310001
..................................................................................................................................................TGCCAGACTCGATCAAACGCT....................................................2130.3310100
.................................................................................................................................................ATGCCAGACTCGATCAAACG......................................................2030.3310001
...............................................................................................................................................TCATGCCAGACTCGATCAAACGCT....................................................2430.3310100
.................................................................................................................................................ATGCCAGACTCGATCAAACGCT....................................................2230.3310001
.........................................................ATTGGTTAGGTATGACTTTAATA...........................................................................................................................................2330.3310001
.........................................................ATTGGTTAGGTATGACTTTAAT............................................................................................................................................2230.3310001
................................................................................................................................................CATGCCAGACTCGATCAAACGCTTG..................................................2530.3310001
.................................................................................TAAAAAATATGGTGCAGGTAACCAC.................................................................................................................2530.3310001
....................................................................................................................................................CCAGACTCGATCAAACGCTTGTTGAA.............................................2630.3310001
.........................................CACATAAAAG-TGTCTATTGGT............................................................................................................................................................2130.3310100
...................................................................................................................................................GCCAGACTCGATCAAACGCT....................................................2030.3310001
.................................................................................TAAAAAATATGGTGCAGGTAACCACT-...............................................................................................................2630.3310001
...............................................................................................................................................TCATGCCAGACTCGATCAA.........................................................1940.2510010
.....................................................................................AAATATGGTGCAGGTAACCACT-TTT............................................................................................................2540.2510001
.................................TTTTGTTGCACATAAAAG-T......................................................................................................................................................................1940.2510001
droEre2
AAA--ATGCAAGGGCGAGTA-----T-TCATTTTTTTGTTGCACGTAAAAG-TGTCTATTGGTTAAGTATGACTTTAATAATAAAAAATATGGAGCAGGTAACCACT-TTTTGATTTTATAT------------AATAAGCCGTCATGCCAGACTCGATCAAACTCTTGTTGAACGTCAAGAAATGTTGCAGTGCAGTATTTTTTGTTCTCAAATGCTTSizeHit CountTotal NormTotalV040
Embryo		V060
Head		V107
Male-body		V108
Head		M055
Female-body		M057
Embryo
................................................................................................................................................................................TCAAGAAATGTTGCAGTGCAGTATTT.................2660.171000010
droYak3
AGT--AAACAACGACGAGGA-----T-TCATTTTTTTGTTGCTCGTAAAAG-TGTCTATTTGTTAGGTATGACTTTAATAATAAGAAATATGGTGCAGGTAGCCACT-TTTTAATTTTATAT------------AATAATCCATTGTGCCAGACTCGATCAAACGCTTGTTGAACATCAAGAAATGTTGCACTGCAGTACTTTTTGTTCTCAAAAGCTASizeHit CountTotal NormTotalV046
Embryo		V052
Head		V120
Male-body		V058
Head		M026
Head		M043
Female-body		M056
Embryo
..........................................TCGTAAAAG-TGTCTATTTGTTAGGTA......................................................................................................................................................2611.0010000010
...........................................................................................................................................TCCATTGTGCCAGACTCGATCAAACGCT....................................................2870.8660000060
........CAACGACGAGGA-----T-TCATTTTTTTGT....................................................................................................................................................................................2590.6760000042
................................................................................................................................................................................TCAAGAAATGTTGCACTGCAGTACT..................2540.5020000011
................................................................................................................................................................................................TGCAGTACTTTTTGTTCTCAAAAGC..2550.4020000020
..............................................................................TAATAAGAAATATGGTGCAGGTAGCC...................................................................................................................2640.2510000010
........................................................................................................................................................................................TGTTGCACTGCAGTACTTTTTGTTC..........2540.2510000001
.....................................................................................................................................................................................AAATGTTGCACTGCAGTACTTTTTG.............2540.2510000010
................................................................................................................................................................................TCAAGAAATGTTGCACTGCAGTACTTT................2740.2510000010
.................................................................................TAAGAAATATGGTGCAGGTAGCCACT-...............................................................................................................2640.2510000010
...........................................................................................................................................................................................TGCACTGCAGTACTTTTTGTTCTCAAA.....2740.2510000010
............................................................TGTTAGGTATGACTTTAATAATAAGAA....................................................................................................................................2750.2010000010
......................................................................................................................................AATAATCCATTGTGCCAGACTCGAT............................................................2550.2010000010
........CAACGACGAGGA-----T-TCATTTTTTTGTT...................................................................................................................................................................................2650.2010000010
...........................................................................TAATAATAAGAAATATGGTGCAGG........................................................................................................................2450.2010000010
.......................................................................................................................TAT------------AATAATCCATTGTGCCAGACTCGA.............................................................2750.2010000010
...............................................................................................................................................TTGTGCCAGACTCGATCAAACGCT....................................................2470.1410000010
............................................................................................................................................CCATTGTGCCAGACTCGATCAAACGCT....................................................2770.1410000010
...........................................................................................................................................TCCATTGTGCCAGACTCGATCAAACG......................................................2670.1410000010
......................................................................................................................................................................TTGTTGAACATCAAGAAATGTTGCAC...........................2670.1410000010
.......................................................................................................................................................................TGTTGAACATCAAGAAATGTTGCAC...........................2570.1410000010
...................................................................................................................................................GCCAGACTCGATCAAACGCTTGTT................................................2470.1410000010
...........................................................................................................................................TCCATTGTGCCAGACTCGATCAAACGC.....................................................2770.1410000001
...............................................................................................................................................TTGTGCCAGACTCGATCAAACGCTTGT.................................................2770.1410000010
droEug1
AAG--AAGTAACGTTGATGA-----A-TCGTTTTTCTGCTGCTCGTAAAAG-CATCTTTTATTAAGATATGATTTGATTATTAAGTAATACGGAGAAGGTAGAAATT-TTTTTATTTTGTAC------------AATAAACCTTTGTGCCAGACTCGATCAAACGCTTGTTGAACGTCAAGAAATGCAGCTGTGCAGTATTCTTTGTTCTCAAATGCAGSizeHit CountTotal NormTotal
No Reads
droBia1
GTT--ATGTTTAGCTGACAT-----G-GAAGTATTGCATTTCATAACAAAT-ATCATGTTGCAAAGATATGACTTCAAGAGTTAATGCGTGTTATTAGGGAGCATTA-TTTTGATTTTATGC------------AATAAGCCGTTAAGCCATATTCTGTCGAATGCTTAATAGACGTCCAAAAATACCGCAGTGCAGTATTCCCTATTTTCAAACGCACSizeHit CountTotal NormTotal
No Reads
droTak1
ACT--AT----TGAAGAAGA-----CTCCTTCTTTTTGATGAACGTAGAAG-CAACGTTTATCGAGATACGATTTTAGCAGCAAATAGTATGGTGCAGGCAGCCTATTTTTTTATTTTATAAGCCTATATTATTTGTAAGCCTATATGCCATACTCTATCAAACGCTTGCTGAACGTCAAGAAATGCAGCAGTGCAGTATTCTTTACACTCAAATGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
GTT--TACTATTGAAGAAGA-----C-TCCTCTTTTTGATGAACGTAGAAT-CAGCGTTTATCGAGATACGATTTTAGCAGCAAATAGTATGGTGCAGGCAGCCATT-TTTTTATTTTATAT------------AGTAAGCCTTTATGCCATACTCTATCAAACGCTTGCTGAACGTCAAGAAATGCAGCAGTGCAGTATTCTTTACACTCAAATGCTGSizeHit CountTotal NormTotal
No Reads
droRho1
GAG--AAGTTGTGTTGACGT-----A-TAATTTCTCTGCTTCACGTAGAAG-CCTCTCTTAGACAAATAGGATCTCAGTAGTAAATAGTAGGGAGCAGGTAGCCATT-TCTTTATCTTATAG------------AGTAATCCGTTGTGCCAAACACGAACA---------TGAACATCAGGAAATGTAGTAGTACAGTATTTTTTGTTCTCAAGTGCGGSizeHit CountTotal NormTotal
No Reads
droFic1
GAG--AAGTAGTGTTGACGT-----T-TCATTTCTCTGCTGCACGTAGAAG-CATCTGTCAGACAAGTAGGATTTCAGTAATAGATAGTATGGGGCAGGTAGCCATT-TCTTTATCTTGTAG------------AGTAATCCATTGTGCCAAACACGATCAAACGCTTGTTGAACATCAAGAAACGTAGCAGTACAATATTTTTTGTTCTCAAATGCAGSizeHit CountTotal NormTotal
No Reads
droKik1
GAG--AAGTAGTGATGACGC-----G-TCACTTCTCTGCTGAACGTAGAAG-CATCTTTTGGACAAATAGGATCTCAGTAGTAAATAGTATGGTGCAGGTAGCCATT-TCTTTATCTTATAG------------AGTAATCCATTGTGCCAAACACGATCAAACGCTTGTTGAACATCAAGAAATGTGGCAGTACAGTATTTTTTGGTCTCAAATGCGGSizeHit CountTotal NormTotal
No Reads
droAna3
AAG--AAGTAACGTAGATGA-----A-TCGTTTTTCTGCTGCACGTAAAAG-CATCTTTTATTAAGATATGATTTAATTATTAAGTAATACGGAGCAGGTAGCAATT-TTTTTATCTTGTAC------------AATAAACCTTTGTGCCAGACTCGATCAAACGCTTGTTGCACGTCAAGAAATGCAGCTGTGCAGTATTTTTTGTTCTCAAATGCAGSizeHit CountTotal NormTotalV105
Male-body		V106
Head		V055
Head		V039
Embryo		M044
Female-body		M058
Embryo
.................................................................................TAAGTAATACGGAGCAGGTAGCAAT.................................................................................................................2570.433000030
.......................................................................................................................................................GACTCGATCAAACGCTTGTTGCACG...........................................2530.331000010
.....................................................................................................................................................CAGACTCGATCAAACGCTTGTTGCACG...........................................2730.331000010
.................................................................................TAAGTAATACGGAGCAGGTAGCAATT-...............................................................................................................2670.292000020
.................TGA-----A-TCGTTTTTCTGCTGCACGTAAAAG-C......................................................................................................................................................................2940.251000010
.........................A-TCGTTTTTCTGCTGCACGTAAAAG-.......................................................................................................................................................................2550.201000010
........................................................................................TACGGAGCAGGTAGCAATT-TTTTTATC.......................................................................................................2760.171000001
.........................................................................................................................C------------AATAAACCTTTGTGCCAGACTCGAT............................................................26130.152000011
.......................................................................................................................TAC------------AATAAACCTTTGTGCCAGACTCGA.............................................................27130.152000002
..............................................................................TATTAAGTAATACGGAGCAGGTAGCAAT.................................................................................................................2870.141000001
........................................................................................................................................TAAACCTTTGTGCCAGACTCGATC...........................................................24120.081000001
..............................................................................................................TTTATCTTGTAC------------AATAAACCTTTGTGCC.....................................................................28120.081000001
......................................................................................................................................AATAAACCTTTGTGCCAGACTCGAT............................................................25130.081000100
.......................................................................................................................TAC------------AATAAACCTTTGTGCCAGACTC...............................................................25130.081000001
.........................................................................................................................C------------AATAAACCTTTGTGCCAGACTCGA.............................................................25130.081000010
droBip1
AAG--AAGTAACGTAGATGA-----A-TCGTTTTTCTGCTGCACGTAAAAG-CATCTTTTATTAAGATATGATTTAATTATTAAGTAATACGGAGCAGGTAGCAATT-T-TTTATCTTGTAC------------AATAATCCTTTGTGCCAGACTCGATCAAACGCTTGTTGAACGTCAAGAAATGCAGCTGTGCAGTATTTTTTGTTCTCAAATGCAGSizeHit CountTotal NormTotal
No Reads
dp5
ATC--CTTCCAGGTCTCGAGCGTATT-CCATTGTTTCCGTTTACAATAAAT-GTTCTATCTGCTAAGTAACTTTTTAAAACGTTGTAATATGTAAACGGGAGTAGCT-TCGCTAGCTTAAGT------------AGTAGACCATTATGCCAAACTCGGTCAAAGGCTTCGCTCACGTCGATAAATACAGCAGAACAAAATAACTGTTTCTCATATGCATSizeHit CountTotal NormTotalV112
Male-body		V043
Embryo		V051
Head		M022
Male-body		M040
Female-body		M059
Embryo		M062
Head
........................................................................................................................................TAGACCATTATGCCAAACTCGGT............................................................23624.33146100014320
........................................................................................................................................TAGACCATTATGCCAAACTCGGTC...........................................................24622.00132000012840
............................................................TGCTAAGTAACTTTTTAAAACGTTG......................................................................................................................................25520.60103103108900
........................................................................................................................................TAGACCATTATGCCAAACTCGG.............................................................22620.00120001011801
...........................................................................................................................................................................TCACGTCGATAAATACAGCAGAACAAAA....................2867.504530004200
........................................................................................................................................................................................TACAGCAGAACAAAATAACTGTT............2365.003000003000
...........................................................................................................................................................................TCACGTCGATAAATACAGCAGAAC........................2463.672200002200
.........................................................................................................................T------------AGTAGACCATTATGCCAAACTCGG.............................................................2553.601800001800
............................................................TGCTAAGTAACTTTTTAAAACGTT.......................................................................................................................................2453.401720001500
.........................................................................................................................T------------AGTAGACCATTATGCCAAACTCGGTC...........................................................2753.401700001700
........................................................................................................................................TAGACCATTATGCCAAACTCG..............................................................2163.171900001900
........................................................................................TATGTAAACGGGAGTAGCT-TCGCTAGCT......................................................................................................2862.501540001100
............................................................................................................................................................................CACGTCGATAAATACAGCAGAAC........................2362.501500001500
........................................................................................................................................TAGACCATTATGCCAAACTCGGTCA..........................................................2562.501500001500
........................................................................................TATGTAAACGGGAGTAGCT-TCGC...........................................................................................................2362.331400001400
........................................................................................TATGTAAACGGGAGTAGCT-TCGCTAGC.......................................................................................................2762.171300001120
........................................................................................TATGTAAACGGGAGTAGCT-TCGCTA.........................................................................................................2562.00124000800
...........................................................................................................................................................................TCACGTCGATAAATACAGCAGAACA.......................2562.001200001200
.........................................................................................................................................AGACCATTATGCCAAACTCGGT............................................................2261.831100001100
............................................................................................................................................................................CACGTCGATAAATACAGCAGAACAAAA....................2761.831110001000
...........................................................................................................................................................................TCACGTCGATAAATACAGCAGAACAAA.....................2761.67101000900
...........................................................................................................................................................................TCACGTCGATAAATACAGCAGA..........................2261.67100011800
.........................................................................................................................T------------AGTAGACCATTATGCCAAACTCG..............................................................2451.6080000800
.........................................................................................................................................AGACCATTATGCCAAACTCGGTC...........................................................2361.5090000900
............................................................TGCTAAGTAACTTTTTAAAACGT........................................................................................................................................2351.4070000700
.........................................................................................................................................AGACCATTATGCCAAACTCGG.............................................................2161.3380000800
.............TCTCGAGCGTATT-CCATTGTTTCCGTT..................................................................................................................................................................................2731.3341000300
............................................................................................................................................................................CACGTCGATAAATACAGCAGAACAAA.....................2661.3380000800
...........................................................................................................................................................................TCACGTCGATAAATACAGCAGAA.........................2361.1770000700
............................................................................................TAAACGGGAGTAGCT-TCGCTAGC.......................................................................................................2361.1771000510
............................................................................................................................................................................CACGTCGATAAATACAGCAGAACA.......................2461.1770000700
........................................................................................................................................TAGACCATTATGCCAAACTCGGTCAA.........................................................2661.1770000700
...................GCGTATT-CCATTGTTTCCGTTTACAA.............................................................................................................................................................................2641.0040000400
........................................................................................TATGTAAACGGGAGTAGCT-TCGCTAG........................................................................................................2661.0062000400
...........................................................................................................................................................................TCACGTCGATAAATACAGCAGAACAA......................2661.0060000600
.............................................................GCTAAGTAACTTTTTAAAACGTTG......................................................................................................................................2451.0050000500
.........................................................................................................................T------------AGTAGACCATTATGCCAAACTC...............................................................2351.0050000500
............................................................................................TAAACGGGAGTAGCT-TCGCTAGCT......................................................................................................2461.0060000600
........................................................................................TATGTAAACGGGAGTAGCT-TCGCT..........................................................................................................2461.0060000600
...........................................................CTGCTAAGTAACTTTTTAAAACGTTG......................................................................................................................................2650.8041000300
...................GCGTATT-CCATTGTTTCCGTTTAC...............................................................................................................................................................................2440.7530000300
.............TCTCGAGCGTATT-CCATTGTTTCCGT...................................................................................................................................................................................2630.6720000200
........................................................................................................................................................................................TACAGCAGAACAAAATAACTGTTTC..........2560.6740000400
....................................................................................................................................................................................TAAATACAGCAGAACAAAATAACT...............2460.6740000310
.......TCCAGGTCTCGAGCGTATT-CCATTGT.........................................................................................................................................................................................2630.6720000200
..........................................................................................TGTAAACGGGAGTAGCT-TCGCTAGCT......................................................................................................2660.6740000400
........................................................................................................................................TAGACCATTATGCCAAACTCGGTCAAAG.......................................................2860.6740000400
.......................................................................................................................................................................TCGCTCACGTCGATAAATACAGCAGAAC........................2860.6740000400
...........................................................CTGCTAAGTAACTTTTTAAAACGT........................................................................................................................................2450.6030000300
............................................................TGCTAAGTAACTTTTTAAAACGTTGTA....................................................................................................................................2750.6030000300
.........................T-CCATTGTTTCCGTTTACAATAAAT-G......................................................................................................................................................................2650.6030000300
.........................................................................................................................T------------AGTAGACCATTATGCCAAACTCGGT............................................................2650.6030000300
.....................................................................................................................TAAGT------------AGTAGACCATTATGCCAAAC.................................................................2550.6030000300
.......................................................................................................................................................AACTCGGTCAAAGGCTTCGCTCACG...........................................2560.5030000300
.........................................................................................ATGTAAACGGGAGTAGCT-TCGCTAGCT......................................................................................................2760.5030000300
........................................................................................TATGTAAACGGGAGTAGCT-TC.............................................................................................................2160.5031000200
.............................................................................................................................................................................ACGTCGATAAATACAGCAGAACA.......................2360.5030000300
........................................................................................................................................................................................TACAGCAGAACAAAATAACTGTTTCT.........2660.5030000300
............................................................TGCTAAGTAACTTTTTAAAACGTTGTAA...................................................................................................................................2850.4020000200
........................................................TATCTGCTAAGTAACTTTTTAAAACG.........................................................................................................................................2650.4020000200
................................................................................................................TAGCTTAAGT------------AGTAGACCATTATGCC.....................................................................2650.4020000200
......................................................................................................................................AGTAGACCATTATGCCAAACTCGG.............................................................2450.4020000200
.............................................................GCTAAGTAACTTTTTAAAACGTT.......................................................................................................................................2350.4020000200
..........................................................TCTGCTAAGTAACTTTTTAAAACGTTG......................................................................................................................................2750.4020000200
..........................................................................................TGTAAACGGGAGTAGCT-TCGCTAGC.......................................................................................................2560.3321000100
.........................................................................................................................................................CTCGGTCAAAGGCTTCGCTCACG...........................................2360.3320000200
..........................................................................................TGTAAACGGGAGTAGCT-TCGCTA.........................................................................................................2360.3321000100
.......................................................................................................................................................................TCGCTCACGTCGATAAATACAGC.............................2360.3320000200
........................................................................................................................................TAGACCATTATGCCAAACTC...............................................................2060.3320000200
.....................................................................................TAATATGTAAACGGGAGTAGCT-TCGCTA.........................................................................................................2860.3322000000
..............................................................................................AACGGGAGTAGCT-TCGCTAG........................................................................................................2060.3320000200
........................................................................................................................................................................................TACAGCAGAACAAAATAACTGTTTCTC........2760.3320000200
.............TCTCGAGCGTATT-CCATTGTTT.......................................................................................................................................................................................2230.3310000100
.......TCCAGGTCTCGAGCGTATT-CCATTGTT........................................................................................................................................................................................2730.3310000100
......TTCCAGGTCTCGAGCGTATT-CCATTG..........................................................................................................................................................................................2630.3310000100
ATC--CTTCCAGGTCTCGAGCGTATT-CCAT............................................................................................................................................................................................2830.3310000100
.......TCCAGGTCTCGAGCGTATT-CCATTG..........................................................................................................................................................................................2530.3310000100
.............................................................................................................................................................................ACGTCGATAAATACAGCAGAACAAAA....................2660.3320000200
....................................................................................................................................................................................TAAATACAGCAGAACAAAATAACTGTT............2760.3320000200
.........................................................................................................................................AGACCATTATGCCAAACTCGGTCA..........................................................2460.3320000200
...............................................................................................................................................TTATGCCAAACTCGGTCAAAGGCTT...................................................2560.3320000200
.......TCCAGGTCTCGAGCGTATT-CCAT............................................................................................................................................................................................2330.3310000100
..C--CTTCCAGGTCTCGAGCGTATT-CC..............................................................................................................................................................................................2430.3310000100
..........................................................................................................................................................TCGGTCAAAGGCTTCGCTCACGTCGA.......................................2660.3320000200
....................................................................................................................................................................................TAAATACAGCAGAACAAAATAACTGT.............2660.3320000200
ATC--CTTCCAGGTCTCGAGCGT....................................................................................................................................................................................................2130.3310000100
............................................................................................................................................................................CACGTCGATAAATACAGCAGA..........................2160.3320000200
..............CTCGAGCGTATT-CCATTGTTTCCGT...................................................................................................................................................................................2530.3310000100
....................................................................................................................................................................................TAAATACAGCAGAACAAAATAACTG..............2560.3320000200
........................................................................................................................................TAGACCATTATGCCAAACTCGGTCAAAGG......................................................2960.3320000110
..C--CTTCCAGGTCTCGAGCGTATT-CCATTG..........................................................................................................................................................................................2830.3310000100
................................................................................................................................................................AAAGGCTTCGCTCACGTCGATA.....................................2260.3320000200
..................AGCGTATT-CCATTGTTTCCG....................................................................................................................................................................................2040.2510000100
...................GCGTATT-CCATTGTTTCCGTTTA................................................................................................................................................................................2340.2510000100
...................GCGTATT-CCATTGTTTCCGTTTACAATA...........................................................................................................................................................................2840.2510000100
....................CGTATT-CCATTGTTTCCGTTTAC...............................................................................................................................................................................2340.2510000100
...................GCGTATT-CCATTGTTTCCGTTT.................................................................................................................................................................................2240.2510000100
...................GCGTATT-CCATTGTTTCCGTTTACA..............................................................................................................................................................................2540.2510000100
................CGAGCGTATT-CCATTGTTTCCGT...................................................................................................................................................................................2340.2510000100
..........................................................................................................T-TCGCTAGCTTAAGT------------AGTAGACCA............................................................................2450.2010000100
..........................................................TCTGCTAAGTAACTTTTTAAAACG.........................................................................................................................................2450.2010000100
........................................................................................................................GT------------AGTAGACCATTATGCCAAACTC...............................................................2450.2010000100
........................TT-CCATTGTTTCCGTTTACAA.............................................................................................................................................................................2150.2010000100
..........................................................................................................T-TCGCTAGCTTAAGT------------AGTAGACCATTATG.......................................................................2950.2010000100
....................................................................................................................TTAAGT------------AGTAGACCATTATG.......................................................................2050.2010000100
.......................................................CTATCTGCTAAGTAACTTTTTAAAACGT........................................................................................................................................2850.2010000100
.......................ATT-CCATTGTTTCCGTTTAC...............................................................................................................................................................................2050.2010000100
.............................................................GCTAAGTAACTTTTTAAAACGTTGTAA...................................................................................................................................2750.2010000100
..........................................................................................................T-TCGCTAGCTTAAGT------------AGTAGACCATTA.........................................................................2750.2010000100
............................................................TGCTAAGTAACTTTTTAAA............................................................................................................................................1950.2010000100
.....................................................................................................................TAAGT------------AGTAGACCATTATGCCAAACT................................................................2650.2010000100
......................................................................................................TAGCT-TCGCTAGCTTAAGT------------AGTAGACCAT...........................................................................2950.2010000100
........................................................TATCTGCTAAGTAACTTTTTAAAAC..........................................................................................................................................2550.2010000100
...................................................................................................................CTTAAGT------------AGTAGACCATTATG.......................................................................2150.2010000100
............................................................................................................TCGCTAGCTTAAGT------------AGTAGACCATT..........................................................................2550.2010000100
...............................................................TAAGTAACTTTTTAAAACGTTG......................................................................................................................................2250.2010000100
.........................................TACAATAAAT-GTTCTATCTGCTAAG........................................................................................................................................................2550.2010000100
..............................................................................................................GCTAGCTTAAGT------------AGTAGACCATT..........................................................................2350.2010000100
................................................................................................................TAGCTTAAGT------------AGTAGACCATT..........................................................................2150.2010000100
.........................................................................................................................T------------AGTAGACCATTATGCCAAACTCGGTCA..........................................................2850.2010000100
............................................................TGCTAAGTAACTTTTTAAAACGTTGT.....................................................................................................................................2650.2010000100
......................................................................................................................AAGT------------AGTAGACCATTATGCCAAACTC...............................................................2650.2010000100
.............................................................GCTAAGTAACTTTTTAAAACGT........................................................................................................................................2250.2010000100
.........................................................................................................................T------------AGTAGACCATTATGCCAAACT................................................................2250.2010000100
.........................................................................................................................T------------AGTAGACCATTATGCCAAAC.................................................................2150.2010000100
..............................................................CTAAGTAACTTTTTAAAACGTTG......................................................................................................................................2350.2010000100
......................TATT-CCATTGTTTCCGTTTACAATAAAT-G......................................................................................................................................................................2950.2010000100
...........................................................CTGCTAAGTAACTTTTTAAAACG.........................................................................................................................................2350.2010000100
.....................................................................................TAATATGTAAACGGGAGTAGCT-T..............................................................................................................2360.1710000100
.....................................................................................................................................................................................AAATACAGCAGAACAAAATAACTG..............2460.1710000100
...................................................................................TGTAATATGTAAACGGGAGTA...................................................................................................................2160.1710000100
............................................................................................TAAACGGGAGTAGCT-TCGCTAGCTTA....................................................................................................2660.1710000100
...........................................................................................GTAAACGGGAGTAGCT-TCGC...........................................................................................................2060.1710000100
.........................................................................................ATGTAAACGGGAGTAGCT-TCGCTAGC.......................................................................................................2660.1710000100
................................................................................................................................................................................TCGATAAATACAGCAGAACAAAA....................2360.1710000100
........................................................................................................................................................ACTCGGTCAAAGGCTTCGCTCACGT..........................................2560.1710000010
.............................................................................................AAACGGGAGTAGCT-TCGCTAGC.......................................................................................................2260.1710000100
.......................................................................................................................................GTAGACCATTATGCCAAACTCGG.............................................................2360.1710000100
..............................................................................................................................................................TCAAAGGCTTCGCTCACGTCG........................................2160.1710000100
......................................................................................................................................................................TTCGCTCACGTCGATAAATACAGCA............................2560.1710000100
.......................................................................................................................................................................................ATACAGCAGAACAAAATAACTGTT............2460.1710000100
........................................................................................TATGTAAACGGGAGTAGCT-TCGCTAGCTT.....................................................................................................2960.1711000000
.....................................................................................TAATATGTAAACGGGAGTAGCT-TCGC...........................................................................................................2660.1710000100
.....................................................................................................................................................................CTTCGCTCACGTCGATAAATACAGC.............................2560.1710000100
..................................................................................................................................................................................................CAAAATAACTGTTTCTCATATGCA.2460.1710000100
..............................................................................................................................................................................CGTCGATAAATACAGCAGAACAAAA....................2560.1710000100
.............................................................................................................................................................................ACGTCGATAAATACAGCAGAACAA......................2460.1710000100
...........................................................................................GTAAACGGGAGTAGCT-TCGCTAGCTT.....................................................................................................2660.1710000100
...................................TCCGTTTACAATAAAT-GTTCTATC...............................................................................................................................................................2460.1710000100
........................................................................................................................................................................CGCTCACGTCGATAAATACAGCAGAAC........................2760.1710000100
.........................................................................................................................................................................................ACAGCAGAACAAAATAACTGTT............2260.1710000100
.................................................................................................................................................................AAGGCTTCGCTCACGTCGA.......................................1960.1710000100
..........................................................................................................................................................TCGGTCAAAGGCTTCGCTCACGTCG........................................2560.1710000100
.......................................................................................................................................................................TCGCTCACGTCGATAAATACAGCAG...........................2560.1710000100
..........................................................................................................................................................TCGGTCAAAGGCTTCGCTCACG...........................................2260.1710000100
...........................................................................................GTAAACGGGAGTAGCT-TCGCTAG........................................................................................................2360.1710000100
............................................................................................TAAACGGGAGTAGCT-TCGCTAG........................................................................................................2260.1710000100
.................................................................................................................................................ATGCCAAACTCGGTCAAAGG......................................................2060.1710000100
..................................................................................................................................................................................GATAAATACAGCAGAACAAA.....................2060.1710000100
........................................................................................................................................................................................TACAGCAGAACAAAATAACTGTTTCTCAT......2960.1710000100
..............................................................................................................................................................................CGTCGATAAATACAGCAGAACAAA.....................2460.1710000100
..........................................................................................................................................................TCGGTCAAAGGCTTCGCT...............................................1860.1710000100
..............................................................................................AACGGGAGTAGCT-TCGCTAGC.......................................................................................................2160.1710000100
.................................................................................................................................................................................CGATAAATACAGCAGAACAAAATAAC................2660.1710000100
........................................................................................TATGTAAACGGGAGTAGCT-...............................................................................................................1960.1710000100
.......................................................................................................................................................................TCGCTCACGTCGATAAATACAGCAGA..........................2660.1710000100
.........................................................................................................................................................CTCGGTCAAAGGCTTCGCTC..............................................2060.1710000100
..........................................................................................................................................................................CTCACGTCGATAAATACAGCAGAACAAAA....................2960.1710000100
..............................................................................................AACGGGAGTAGCT-TCGCTAGCT......................................................................................................2260.1710000100
..................................................................................................................................................................AGGCTTCGCTCACGTCGATAA....................................2160.1710000100
...................................................................................................................................................................................ATAAATACAGCAGAACAAAATAACTGTT............2860.1710000100
............................................................................................TAAACGGGAGTAGCT-TCGCTAGCTT.....................................................................................................2560.1710000100
.....................................................................................................................................................................................................AATAACTGTTTCTCATATGC..2060.1710000100
...........................................................................................................................................................CGGTCAAAGGCTTCGCTCACGTCGA.......................................2560.1710000100
........................................................................................................................................TAGACCATTATGCCAAACTCGGTCAAA........................................................2760.1710000100
.....................................................................................................................................................................CTTCGCTCACGTCGATAAATACAGCA............................2660.1710000100
........................................................................................................................................................ACTCGGTCAAAGGCTTCGCTC..............................................2160.1710000100
.....................................................................................TAATATGTAAACGGGAGTAGCT-TCG............................................................................................................2560.1710000100
.............................................................................................................................................CATTATGCCAAACTCGGTCAAAGGC.....................................................2560.1710000100
............................................................................................................................................................GGTCAAAGGCTTCGCTCACGT..........................................2160.1710000100
........................................................................................................................................................ACTCGGTCAAAGGCTTCGCTCACG...........................................2460.1710000100
...........................................................................................GTAAACGGGAGTAGCT-TCGCTAGCT......................................................................................................2560.1711000000
.........................................................................................ATGTAAACGGGAGTAGCT-TC.............................................................................................................2060.1710000100
...................................................................................................................................................................GGCTTCGCTCACGTCGATAAATACAG..............................2660.1710000100
.............................................................................................................................................................................ACGTCGATAAATACAGCAGAACAAA.....................2560.1710000100
.....................................................................................TAATATGTAAACGGGAGTAGCT-...............................................................................................................2260.1710000100
...............................................................................................................................................................CAAAGGCTTCGCTCACGTCGA.......................................2160.1710000100
..........................................................................................TGTAAACGGGAGTAGCT-TCGCTAGCTT.....................................................................................................2760.1711000000
.....................................................................................................................................................CAAACTCGGTCAAAGGCTTCGCTCACG...........................................2760.1710000100
.......................................................................................................................................................................TCGCTCACGTCGATAAATACAGCA............................2460.1710000100
...............................................................................ACGTTGTAATATGTAAACGGG.......................................................................................................................2160.1710000100
.............................................................................................................................................CATTATGCCAAACTCGGTCAAAGGCT....................................................2660.1710000100
........................................................................................................................................................ACTCGGTCAAAGGCTTCGCT...............................................2060.1710000100
........................................................................................TATGTAAACGGGAGTAGCT-T..............................................................................................................2060.1710000100
...............................................................................................................................................................CAAAGGCTTCGCTCACGTCG........................................2060.1710000100
....................................................................................................................................................................GCTTCGCTCACGTCGATAAATACA...............................2460.1710000100
............................................................................................................................................................................CACGTCGATAAATACAGCA............................1960.1710000100
..............................................................................................AACGGGAGTAGCT-TCGCTAGCTT.....................................................................................................2360.1710000100
................................................................................................................................................TATGCCAAACTCGGTCAAAGGCTTC..................................................2560.1710000100
..............................TTGTTTCCGTTTACAATAAAT-GT.....................................................................................................................................................................2360.1710000100
........................................................................................................................................................................CGCTCACGTCGATAAATACAGCAGAACA.......................2860.1710000100
.................................................................................................................................................ATGCCAAACTCGGTCAAAGGCTTCGC................................................2660.1710000100
.............................................................................................................................................................................ACGTCGATAAATACAGCAGAAC........................2260.1710000100
........................................................................................................................................................................................TACAGCAGAACAAAATAACTGTTTCTCA.......2860.1710000100
............................................................................................................................................................................CACGTCGATAAATACAGCAGAA.........................2260.1710000100
...............................................................................................................................................TTATGCCAAACTCGGTCAAAGGCT....................................................2460.1710000100
..............................................................................................................................................................TCAAAGGCTTCGCTCACGT..........................................1960.1710000100
............................................................................................................................................................................CACGTCGATAAATACAGCAGAACAA......................2560.1710000100
..................................................................................................................................................................AGGCTTCGCTCACGTCGATAAA...................................2260.1711000000
.........................................................................................................................................................................................ACAGCAGAACAAAATAACTGTTTC..........2460.1710000100
............................CATTGTTTCCGTTTACAATAA..........................................................................................................................................................................2160.1710000010
droPer2
AAATCCTTCCAGGTCTCGAGCGTATT-CCATTGTTTCCGTTTACAAAAAATTTTTCTATCTGCTAAGTAACTTTTTAAAACGTTGTAATATGTAAACGGGAGTAGCT-TCGCTAGCTTAAGT------------AGGAGACCATTATGCCAAACTCGGTCAAAGGCTTCGCTCACGTCAATAAATACGGCAGAACAAAATAACTGTTTCTCATATG---SizeHit CountTotal NormTotalV111
Male-body		V042
Embryo		V050
Head		V057
Head		M021
Embryo		M042
Female-body
.....................................................................................TAATATGTAAACGGGAGTAGCT-TCGC...........................................................................................................26201.50300000030
..........................................................................................TGTAAACGGGAGTAGCT-TCGCTAGCT......................................................................................................26200.255500000
........................................................................................TATGTAAACGGGAGTAGCT-TCGCTA.........................................................................................................25200.204000004
........................................................................................................................................................ACTCGGTCAAAGGCTTCGCTCACG...........................................24200.102000002
...................................................................................TGTAATATGTAAACGGGAGTAGCT-T..............................................................................................................25200.051000001
........................................................TATCTGCTAAGTAACTTTTTAAAACGT........................................................................................................................................27200.051000001
.....................................................................................TAATATGTAAACGGGAGTA...................................................................................................................19200.051000001
........................................................................................................................................................ACTCGGTCAAAGGCTTCGCTCACGT..........................................25200.051000010
............................................................................................................................................CCATTATGCCAAACTCGGTCA..........................................................21200.051000001
..................................................................................................................................................TGCCAAACTCGGTCAAAGGCTT...................................................22200.051000001
.......TCCAGGTCTCGAGCGTATT-CCATT...........................................................................................................................................................................................24200.051000001
.........................................................ATCTGCTAAGTAACTTTTTAAAA...........................................................................................................................................23200.051000001
............................................................TGCTAAGTAACTTTTTAAAACGTTGTAA...................................................................................................................................28200.051000001
...........................................................................TAAAACGTTGTAATATGTAAACGGGAGT....................................................................................................................28200.051000001
.................................................................................................................................................ATGCCAAACTCGGTCAAAGGC.....................................................21200.051000001
droWil2
AGT--AAAGGCATTTGAAAT-----T-TCTCCTTGTTGTCGAACATAAAAA-TGTCTGTTGCCAAGATAAGACTTTAATAATAGATAGTAAGGAGCAGGAAGCCATT-TTTTTATTTTATAC------------AGAATGCCATCGTGCCATACTCGGTCAAACGCTTGCTGCACACCAAGGAAAACTACGGAGCAGTATTCCTTATTTTCAAGAGCATSizeHit CountTotal NormTotalV117
Male-body		V118
Embryo		V119
Head		M020
Head		M045
Female-body
..................................................................................................................................................TGCCATACTCGGTCAAACGCTTGCTG...............................................26134.08530111041
....................................................................................................................TTATAC------------AGAATGCCATCGTGCCATA..................................................................25132.8537033004
....................................................................................................................TTATAC------------AGAATGCCATCGTGCCATAC.................................................................26132.3130090021
..............................................................................................................................................................TCAAACGCTTGCTGCACACCAAGGA....................................2511.00100001
.......................................................................................................................TAC------------AGAATGCCATCGTGCCATACTCGG.............................................................27131.0013000013
......................................................................................................................................................................................AAAACTACGGAGCAGTATTCCTTATTT..........27130.62806002
.................................................................................................................................................................................CAAGGAAAACTACGGAGCAGTAT...................23130.54704003
................................................................................................................TATTTTATAC------------AGAATGCCATCGTGCCA....................................................................27130.54703004
.....................................................................................................................TATAC------------AGAATGCCATCGTGCCATAC.................................................................25130.54703004
....................................................................................................................TTATAC------------AGAATGCCATCGTGCCAT...................................................................24130.54704003
....................................TGTCGAACATAAAAA-TGTCTGTTGCCAA..........................................................................................................................................................2820.50100001
.......................................................................................................................................................TACTCGGTCAAACGCTTGCTGCACA...........................................2520.50100001
.............................TCCTTGTTGTCGAACATAAAAA-TGTCTG.................................................................................................................................................................2820.50100001
.........................T-TCTCCTTGTTGTCGAACATAAAAA-T......................................................................................................................................................................2620.50100001
......................................TCGAACATAAAAA-TGTCTGTTGCCAAG.........................................................................................................................................................2720.50100001
...................................................................................................................................................GCCATACTCGGTCAAACGCTTGCTGC..............................................2620.50100001
...........................................................................................................................................................................................TACGGAGCAGTATTCCTTATTTTCAAG.....27130.46600006
......................................................................................................................................................................................AAAACTACGGAGCAGTATTCCTTATT...........26130.46604002
...............................................................................................................................................TCGTGCCATACTCGGTCAAACGCT....................................................24130.46604002
...................................................................................................................TTTATAC------------AGAATGCCATCGTGCCATAC.................................................................27130.46603003
.......................................................................................................................TAC------------AGAATGCCATCGTGCCATACTCGGT............................................................28130.38502003
...........................................................................TAATAATAGATAGTAAGGAGCAGGA.......................................................................................................................2530.33101000
....................................................................AAGACTTTAATAATAGATAGTAAGGA.............................................................................................................................2630.33101000
............TTTGAAAT-----T-TCTCCTTGTTGTCGAACA..............................................................................................................................................................................2730.33100001
...................................................................TAAGACTTTAATAATAGATAGTAAGG..............................................................................................................................2630.33100001
..............................................................................TAATAGATAGTAAGGAGCAGGAAG.....................................................................................................................2430.33101000
.....................................................................................................................TATAC------------AGAATGCCATCGTGCCATACTCG..............................................................28130.31401003
..........................................................................................................................................TGCCATCGTGCCATACTCGGTCAAACGCT....................................................29130.31400004
................................................................................................................TATTTTATAC------------AGAATGCCATCGTGC......................................................................25130.31403001
...................................................................................................................TTTATAC------------AGAATGCCATCGTGCCATA..................................................................26130.31404000
.......................................................................................................................TAC------------AGAATGCCATCGTGCCATACTCG..............................................................26130.31400004
...............................................................................................................................................TCGTGCCATACTCGGTCAAACGCTTGC.................................................27130.31402002
..........................................................................................................................................TGCCATCGTGCCATACTCGGTCAAACG......................................................27130.31403001
....................................................................................................................TTATAC------------AGAATGCCATCGTGCCATACT................................................................27130.31403001
.....................................................................................................................................................CATACTCGGTCAAACGCTTGCTG...............................................23130.31401003
...............................................................................................................TTATTTTATAC------------AGAATGCCATCGTGCCA....................................................................28130.23303000
.................................................................................................................................................................................CAAGGAAAACTACGGAGCAGTATTC.................25130.23303000
.....................................................................................................................TATAC------------AGAATGCCATCGTGCCATACT................................................................26130.23302001
..........................................................................................................................................TGCCATCGTGCCATACTCGGTCAAACGC.....................................................28130.23300003
................................................................................................................................................CGTGCCATACTCGGTCAAACGCTTG..................................................25130.23300003
..................................................................................................................................................TGCCATACTCGGTCAAACGCTTGC.................................................24140.21301002
..................................................................................................................................................TGCCATACTCGGTCAAACGCTTG..................................................23150.20301002
................................................................................................................TATTTTATAC------------AGAATGCCATCGTG.......................................................................24130.15201001
............................................................................................................................................CCATCGTGCCATACTCGGTCAAACGCT....................................................27130.15202000
.......................................................................................................................TAC------------AGAATGCCATCGTGCCATACT................................................................24130.15202000
....................................................................................................................TTATAC------------AGAATGCCATCGTGCCA....................................................................23130.15202000
...................................................................................................................TTTATAC------------AGAATGCCATCGTGCCAT...................................................................25130.15201001
...............................................................................................................................................................................................GAGCAGTATTCCTTATTTTCAAGAGCAT28130.15202000
..................................................................................................................TTTTATAC------------AGAATGCCATCGTGCCA....................................................................25130.15201001
.....................................................................................................................TATAC------------AGAATGCCATCGTGCCATACTC...............................................................27130.15202000
................................................................................................................................................CGTGCCATACTCGGTCAAACGCTTGC.................................................26130.15201001
......................................................................................................................ATAC------------AGAATGCCATCGTGCCA....................................................................21130.15201001
.......................................................................................................................................................TACTCGGTCAAACGCTTGCTG...............................................21130.15201001
.....................................................................................................................TATAC------------AGAATGCCATCGTGCCATACTCGG.............................................................29130.15200002
......................................................................................................................................................................................AAAACTACGGAGCAGTATTCCTTA.............24140.14202000
..................................................................................................................................................TGCCATACTCGGTCAAACGCTTGCT................................................25140.14200002
...................................................................................................................................................GCCATACTCGGTCAAACGCTTG..................................................22150.13200002
.................................................................................................................................................GTGCCATACTCGGTCAAACGCTTGCTG...............................................27120.08100001
................................................................................................................................................CGTGCCATACTCGGTCAAACGCTTGCTG...............................................28120.08100001
........................................................................................................................AC------------AGAATGCCATCGTGCCATACTCGG.............................................................26130.08100001
........................................................................................................................AC------------AGAATGCCATCGTGCCATACTCGGT............................................................27130.08101000
.......................................................................................................................TAC------------AGAATGCCATCGTGCCATACTC...............................................................25130.08101000
.................................................................................................................................................................................CAAGGAAAACTACGGAGCAGTATTCC................26130.08101000
.....................................................................................................................TATAC------------AGAATGCCATCGTGCCA....................................................................22130.08100001
.................................................................................................................ATTTTATAC------------AGAATGCCATCGTGCC.....................................................................25130.08100001
..............................................................................................................TTTATTTTATAC------------AGAATGCCATCGTGCCA....................................................................29130.08101000
................................................................................................................TATTTTATAC------------AGAATGCCATCGTGCCAT...................................................................28130.08101000
.....................................................................................................................TATAC------------AGAATGCCATCGTGCCATA..................................................................24130.08101000
.................................................................................................................................................................................CAAGGAAAACTACGGAGCAGTATTCCT...............27130.08100001
.......................................................................................................................TAC------------AGAATGCCATCGTGCCATACTCGGTC...........................................................29130.08100001
...............................................................................................................TTATTTTATAC------------AGAATGCCA............................................................................20130.08100001
.................................................................................................................................................................................CAAGGAAAACTACGGAGCAGTATT..................24130.08101000
.........................................................................................................................C------------AGAATGCCATCGTGCCATACTCGGT............................................................26130.08101000
........................................................................................................................AC------------AGAATGCCATCGTGCCATACTCG..............................................................25130.08100001
.....................................................................................................................TATAC------------AGAATGCCATCGTGCC.....................................................................21130.08101000
................................................................................................................................................................................................AGCAGTATTCCTTATTTTCAAGAGCA.26130.08101000
................................................................................................................TATTTTATAC------------AGAATGCCATCGTGCC.....................................................................26130.08101000
.................................................................................................................ATTTTATAC------------AGAATGCCATCGTGCCA....................................................................26130.08100100
......................................................................................................................................AGAATGCCATCGTGCCAT...................................................................18130.08101000
....................................................................................................................TTATAC------------AGAATGCCATCGT........................................................................19130.08101000
...............................................................................................................TTATTTTATAC------------AGAATGCCAT...........................................................................21130.08101000
....................................................................................................................TTATAC------------AGAATGCCATCGTGC......................................................................21130.08101000
.......................................................................................................................TAC------------AGAATGCCATCGTGCCATAC.................................................................23130.08101000
...............................................................................................................TTATTTTATAC------------AGAATGCCATCGTGC......................................................................26130.08100001
..............................................................................................................TTTATTTTATAC------------AGAATGCCATCG.........................................................................24130.08100001
...............................................................................................................................................................................................GAGCAGTATTCCTTATTTTCAAGAGCA.27130.08100001
...........................................................................................................................................................................................TACGGAGCAGTATTCCTTA.............19140.07101000
.....................................................................................................................................................CATACTCGGTCAAACGCTTGC.................................................21140.07100001
..................................................................................................................................................................................AAGGAAAACTACGGAGCAGTATTC.................24140.07100001
......................................................................................................................................................ATACTCGGTCAAACGCTTGC.................................................20140.07100001
.......................................................................................................................................................................................AAACTACGGAGCAGTATTCC................20140.07101000
......................................................................................................................................................................................AAAACTACGGAGCAGTATTCC................21140.07101000
..................................................................................................................................................................................AAGGAAAACTACGGAGCAGTATT..................23140.07101000
..................................................................................................................................................TGCCATACTCGGTCAAACG......................................................19150.07101000
droVir3
GGA--AAGCAATGGCGACGA-----T-TCACTTTTTTGCTGCACGCAGAAG-CATAGTTTACCCAAATACAACTTAAA---TAAATAGTTTGGTGTAGGTTGCCACT-TCTATATTTTATAT------------AATATACCGCTGTGCCAAACGCTATAAAATGCTTTTTGAACGTGAAGATATGCTGCAGTACAATATTTTTTGTTTTCAAAAGCTGSizeHit CountTotal NormTotalV116
Male-body		V053
Head		V047
Embryo		M027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis
No Reads
droMoj3
AGT--GCATATAGTGGACGA-----T-TCATCCTGTTCTTGAACATAGAAT-ATCCTGTTTTCTAAGTAGGATTTTATTATTAAGAAGTACGGAGCGGACAACCCTT-TTTTAATTTTGTAC------------AGCAGTCCTACATGCCACACTCTATCGAAGGCCTATTTGACATCCAAAAATACTCCAGTGCAATATTT-TTGCTTTAAAACGCATSizeHit CountTotal NormTotalV110
Male-body		V056
Head		V049
Head		V041
Embryo		M046
Female-body		M060
Embryo
No Reads
droGri2
AGATTATGCCTGGCCTAGACCT---C-ACACCTCCAGTGTTGACGACAAAG-CTACGATCGCTCAAATAGCTCCGGAGAACTCTATACAAAGTTGGCGGCAACAACC-TGATCAACTTATAC------------AGAAGTCCTACATGCCACACTCTGTCAAACGCTTCGCTGATGTCAATGAATACAGCAGAGCAATACTGTCGCTTCTCATAAGCACSizeHit CountTotal NormTotalV109
Male-body		M041
Female-body
...........................................................................................................................................................................TGATGTCAATGAATACAGCAGAGCAA......................2620.50110

Generated: 12/06/2013 at 02:29 PM